December 14, 1999

CGAT_0.910 now available. This release allows CGAT to work with the new email BLAST format. It is necesary to upgrade due to this change in BLAST.

October 15, 1999

CGAT_0.905 now available. This release fixes a few bugs. One bug caused GRAIL polyA sites and promoters on the reverse strand to be displayed in the wrong place. A second bug caused reverse strand promoters to be displayed oddly.

October 6, 1999

CGAT_0.904 now available. This release fixes a bug which causes BLAST output files to have incorrect bp numbering. This gives incorrect BLAST results and can cause BLAST output parsing to fail or hang in some circumstances, depending on the fasta descriptor line.

September 23, 1999

CGAT_0.903 now available. This release fixes a few small bugs.

MZEF mouse exon prediction through dna_to_fplot is working again. Previously there was a problem with the MZEF web site.

July 17, 1999

GRAIL repeat masking service back up and running. dna_to_fplot can be run normally.

July 15, 1999

Added to the 'Getting started' documention.

July 10, 1999

GRAIL repeat masking service is unavailable. To use dna_to_fplot, mask the sequence using RepeatMasker and then run dna_to_fplot. Detailed explanation here.

Written by Jim Lund in the lab of Roger Reeves, Johns Hopkins University