Tab-delimited file. For primer pairs which amplify more than one PCR product, information per PCR product is colon separated. SUID is the Stanford Microarray Database ID number. Primer pair Current_name Genes Number of PCR products Number of genes matched PCR primer mismatches Exon content of PCR product (bp) Repetitive content of PCR product (bp) Length of PCR product Chromosome Start bp,End bp Gene name changed? SUID 98_99_pcr 2000_pcr B0244.3 no_gene B0244.2,B0244.3 1 2 0,0 70,141 97 1188 III 5800845,5802032 changed + + C16C8.3 no_gene C16C8.2 1 1 0,0 58 127 1596 II 3435546,3437141 changed + + C24A11.9 no_gene F27C1.6 1 1 0,0 51 0 1503 I 5336084,5337586 changed + + C30E1.1 no_gene C30E1.t1 1 1 0,0 71 0 1009 X 16957998,16959006 changed + + C37G2.1 no_gene F19D8.4 1 1 0,0 108 0 279 X 13842540,13842818 changed d d C51G7.H no_gene U08022-1.Y79H2A 1 1 0,0 144 45 950 III 12068598,12069547 changed + + D1053.5 no_gene C40H5.1 1 1 0,0 105 0 821 X 11772796,11773616 changed + + F09E10.9 no_gene F09E10.8 1 1 0,0 116 0 2298 X 1549386,1551683 changed + + F11A1.1 no_gene AF136238-1.F11A1 1 1 0,0 60 0 1195 X 10679607,10680801 changed + + F26A1.5 no_gene F26A1.4 1 1 0,0 67 0 646 III 4863502,4864147 changed + + F28A10.10 no_gene F28A10.6 1 1 0,0 57 0 1181 II 845853,847033 changed + + F49F1.2 no_gene F49F1.3 1 1 0,0 67 0 991 IV 4127491,4128481 changed + + F54A3_31.C no_gene F54A3.5 1 1 0,0 144 0 905 II 2224876,2225780 changed nb nb H12D21.1 no_gene ZC412.7:H12D21.1 2 2 0,0 105:105 0:0 1080:1080 V:V 14881450,14882529:14887818,14888897 changed + + R05D8.K no_gene R05D8.1 1 1 0,0 50 0 623 V 2777953,2778575 changed nb nb R07G3.4 no_gene F35D2.5 1 1 0,0 57 0 853 II 7592678,7593530 changed + + T13G4.G no_gene T13G4.5 1 1 0,0 105 0 1036 X 1231073,1232108 changed + + T19E7.4 no_gene T19E7.3 1 1 0,0 99 0 804 IV 5675709,5676512 changed + + Y105C5A.I no_gene Y105C5A.10 1 1 0,0 141 0 651 IV 15613184,15613834 changed + + Y105E8D.A no_gene Y105E8A.cc 1 1 0,0 96 0 1942 I 14428635,14430576 changed + + Y116F11A.FF no_gene Y43F8B.6 1 1 0,0 111 0 792 V 19486557,19487348 changed + + Y116F11A.RR no_gene B0399.1 1 1 0,0 115 0 1463 V 19559426,19560888 changed + + Y116F11A.SS no_gene B0399.1,B0399.t1 1 2 0,0 118,72 0 1902 V 19570793,19572694 changed + + Y119D3_444.A no_gene Y82E9BR.10 1 1 0,0 125 0 1126 III 1420199,1421324 changed + d Y119D3_456.B no_gene Y82E9BR.5 1 1 0,0 126 0 1418 III 1433052,1434469 changed d f Y119D3_456.D no_gene Y82E9BR.6 1 1 0,0 141 0 968 III 1426879,1427846 changed + + Y119D3_465.M no_gene Y22D7AL.16 1 1 0,0 119 0 903 III 1710421,1711323 changed + + Y13C8A.A no_gene Y13C8A.1 1 1 0,0 139 50 1082 X 16913712,16914793 changed + + Y15E3B.G no_gene C33A11.1 1 1 0,0 135 0 1073 X 15388546,15389618 changed + + Y17G9B.B no_gene Y17G9B.8 1 1 0,0 116 0 551 IV 4769807,4770357 changed + + Y18H1A_68.F no_gene Y18H1A.1 1 1 0,0 53 0 843 I 690510,691352 changed + + Y34D9A_153.A no_gene Y34D9A.1 1 1 0,0 120 0 934 I 1020869,1021802 changed d d Y39G10A_236.D no_gene W03F11.6a 1 1 0,0 62 0 1138 I 2108011,2109148 changed + + Y39G10A_237.B no_gene Y74C10AR.1 1 1 0,0 136 0 1199 I 2401053,2402251 changed + + Y39G10A_241.B no_gene ::Y74C10AL.1:Y53G8AM.3: 5 2 0,0 0:0:114:114:0 0:0:0:0:0 916:916:917:917:917 III:III:I:III:V 7306794,7307709:8611603,8612518:2382810,2383726:3308402,3309318:19830080,19830996 changed + + Y39G10A_246.K no_gene Y39G10AR.12 1 1 0,0 103 0 1127 I 2213456,2214582 changed + + Y41D4A_2615.A no_gene Y41D4B.12 1 1 0,0 82 0 1201 IV 1615913,1617113 changed + + Y42G9A.E no_gene Y42G9A.1 1 1 0,0 106 0 2746 III 6196277,6199022 changed + f Y43C5B.1 no_gene K11E8.1k 1 1 0,0 59 0 2576 IV 10351467,10354042 changed + + Y46H3A.H no_gene Y32G9B.1 1 1 0,0 129 0 1986 V 1821124,1823109 changed + + Y47D3A.BB no_gene Y47D3A.25 1 1 0,0 147 0 1368 III 11352549,11353916 changed nb nb Y47D3A.K no_gene M94130-1.Y47D3A,Y47D3A.6 1 2 0,0 61,117 387 2260 III 11237582,11239841 changed + nb Y47D3A. no_gene M94130-1.Y47D3A 1 1 0,0 96 0 1149 III 11240493,11241641 changed + + Y47D3A.U no_gene Y47D3A.17b 1 1 0,0 137 0 319 III 11309100,11309418 changed + + Y48C3A.I no_gene AF059715-1.Y48C3A 1 1 0,0 51 0 538 II 13320178,13320715 changed + f Y48G8A_3945.B no_gene Y48G8AL.1 1 1 0,0 61 0 863 I 1213715,1214577 changed + + Y50D7_165.A no_gene Y50D7A.1:Y50D7A.1 2 1 0,0 70:70 0:0 2483:3254 III:III 292082,294564:291311,294564 changed + + Y51H4A.G no_gene Y51H4A.t1 1 1 0,0 73 99 1337 IV 16508452,16509788 changed nb nb Y53G8A_1734.D no_gene Y53G8AR.3 1 1 0,0 123 0 995 III 3357816,3358810 changed + + Y53G8A_1734.G no_gene Y53G8AR.7 1 1 0,0 132 0 1117 III 3335507,3336623 changed + + Y53G8A_2706.C no_gene ::Y74C10AL.1:Y53G8AM.3: 5 2 0,0 0:0:114:114:0 0:0:0:0:0 934:934:935:935:935 III:III:I:III:V 7306794,7307727:8611603,8612536:2382792,2383726:3308384,3309318:19830080,19831014 changed + + Y53G8B_4255.C no_gene H06I04.5 1 1 0,0 86 397 503 III 3101762,3102264 changed nb nb Y59E1B.C no_gene B0294.3,Y59E1B.t1 1 2 0,0 128,68 0 2701 X 1924436,1927136 changed + d Y5H2B.D no_gene Y5H2B.2 1 1 0,0 149 0 1358 V 2194954,2196311 changed + + Y61A9LA_72.E no_gene Y61A9LA.5 1 1 0,0 144 0 1137 V 4556522,4557658 changed + + Y67D8A_360.A no_gene Y67D8C.4 1 1 0,0 146 0 1029 IV 3064320,3065348 changed + + Y67D8A_380.C no_gene Y67D8C.8 1 1 0,0 144 0 1104 IV 3078776,3079879 changed + + Y74C10A_152.B no_gene Y74C10AR.1 1 1 0,0 136 0 1199 I 2401053,2402251 changed + + Y74C10A_157.B no_gene ::Y74C10AL.1:Y53G8AM.3: 5 2 0,0 0:0:114:114:0 0:0:0:0:0 916:916:917:917:917 III:III:I:III:V 7306794,7307709:8611603,8612518:2382810,2383726:3308402,3309318:19830080,19830996 changed + + Y76B12C_67.C no_gene Y76B12C.3 1 1 0,0 87 0 2398 IV 1987061,1989458 changed + + Y80D3A.C no_gene Y80D3A.2 1 1 0,0 149 0 1180 V 18861431,18862610 changed + + Y87G2A.N no_gene Y87G2A.6 1 1 0,0 69 63 1971 I 13464737,13466707 changed + + Y95B8A_84.B no_gene Y95B8A.11 1 1 0,0 145 0 735 I 890893,891627 changed + + Y97E10A_261.A no_gene Y97E10B.6 1 1 0,0 96 0 1455 V 7917214,7918668 changed + + ZC155.6 no_gene ZC155.4 1 1 0,0 144 0 1158 III 5260064,5261221 changed + + ZC412.7 no_gene ZC412.7:H12D21.1 2 2 0,0 105:105 0:0 1080:1080 V:V 14881450,14882529:14887818,14888897 changed + + ZC581.4 no_gene D2092.1b 1 1 0,0 140 0 1640 I 6557807,6559446 changed + +