Hill et al 2000, developmentally modulated cluster, 69 genes

Gene list file name:Hill2000_T1_cluster4-1.txt
Type of gene identifier:Affymetrix custom chip
Description:Hill et al 2000, Supplymental Dataset, developmentally modulated genes cluster(4,1)  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AFF_Y48G1A_53.D Aff_Y48G1A_53.D P W
B0238.12 Aff_B0238.12 P W All gene names: B0238.12; 5F745; CE07702; WBGene00015076; WP:CE07702
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

B0273.2 Aff_B0273.2 P W All gene names: puf-7; B0273.2; B0273.2.1; B0273.2.2; 4G253; CE16788; NM_068419; WBGene00004243; WP:CE16788 WormBase description: puf-7 encodes a protein 97% identical to PUF-6 and functions redundantly with the other PUF genes, fbf-1, fbf-2, puf-6, and puf-8, during primordial germ cell development, based on combinatorial RNAi; interacts with NOS-2 in yeast two-hybrid screens.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0414.3 Aff_B0414.3 P W All gene names: hil-5; B0414.3; 1G351; CE07733; NM_059277; WBGene00001856; WP:CE07733 WormBase description: histone H1
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0414.5 Aff_B0414.5 P W All gene names: cpb-3; B0414.5; 1G366; CE07735; NM_059279; WBGene00000772; WP:CE07735 WormBase description: The cbp-3 gene encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog. WormBase CDS description: RNA binding protein
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C01G8.1 Aff_C01G8.1 P W All gene names: C01G8.1; 1F842; CE07801; WBGene00015312; WP:CE07801
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C03H12.1 Aff_C03H12.1 P W All gene names: C03H12.1; CE35380; WBGene00007284; WP:CE35380; XQ313
C05C10.5 Aff_C05C10.5 P W All gene names: C05C10.5; C05C10.5c.1; C05C10.5c.2; C05C10.5c.3; 2K235; CE01469; CE35822; CE39217; WBGene00007332; WP:CE01469; WP:CE35822; WP:CE39217
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C08C3.4 Aff_C08C3.4 P W All gene names: C08C3.4; 3I884; CE00069; CE39671; WBGene00015591; WP:CE00069; WP:CE39671
C18G1.5 Aff_C18G1.5 P W All gene names: hil-4; C18G1.5; C18G1.5.1; C18G1.5.2; H1.4; 5F233; CE17421; NM_071876; WBGene00001855; WP:CE17421 WormBase description: histone H1
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25A1.8 Aff_C25A1.8 P W All gene names: C25A1.8; 1K760; CE08374; WBGene00007709; WP:CE08374 WormBase description: lectin
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C25A1.9 Aff_C25A1.9 P W All gene names: C25A1.9; 1K763; CE18532; WBGene00007710; WP:CE18532
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C29A12.1 Aff_C29A12.1 P W All gene names: C29A12.1; 5L292; CE05326; WBGene00007797; WP:CE05326
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, Fig2b shared                                   
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C30F12.4 Aff_C30F12.4 P W All gene names: C30F12.4; 1H548; CE16884; WBGene00016263; WP:CE16884
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C35D10.7 Aff_C35D10.7 P W All gene names: C35D10.7; C35D10.7b.1; C35D10.7b.2; 3F947; CE32160; CE32161; WBGene00016444; WP:CE32160; WP:CE32161
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C47E12.2 Aff_C47E12.2 P W All gene names: C47E12.2; C47E12.2.1; C47E12.2.2; 4K766; CE05446; WBGene00008147; WP:CE05446 WormBase description: ADP/ATP carrier protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Lund et al 2002   Fig3C Germline-intrinsic,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C48B4.7 Aff_C48B4.7 P W All gene names: C48B4.7; 3K648; CE00483; WBGene00008170; WP:CE00483
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

C50F7.2 Aff_C50F7.2 P W All gene names: clx-1; col-4; C50F7.2; 4I499; CE39705; NM_068868; WBGene00000551; WP:CE39705 WormBase description: clx-1 encodes a protein that contains 23 copies of a 15 amino acid repeat, possibly derived from a collagen triplet; there is no transcript evidence for this locus.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

D2005.4 Aff_D2005.4 P W All gene names: D2005.4; 1I393; CE17619; WBGene00008399; WP:CE17619
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                 
                                              daf-16 Resveratrol                                                                 

F14H3.6 Aff_F14H3.6 P W All gene names: F14H3.6; 5Q538; CE23652; WBGene00008825; WP:CE23652
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              males vs glp4 male enriched , Reinke et al 2004, wt                                
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E                                                              

F32D1.7 Aff_F32D1.7 P W All gene names: F32D1.7; 5E854; CE09871; WBGene00017986; WP:CE09871
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, intrinsic, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

F32H2.3 Aff_F32H2.3 P W All gene names: spd-2; F32H2.3; F32H2.3.1; F32H2.3.2; 1J544; CE09878; NM_060013; WBGene00004953; WP:CE09878 WormBase description: spd-2 encodes a protein with three predicted coiled-coil domains; SPD-2 activity is essential for centrosome maturation and duplication, and hence for proper mitotic spindle assembly; in regulating the early steps of centrosome maturation, SPD-2 acts together with the coiled-coil protein SPD-5, the Aurora-A kinase AIR-1, and the cytoplasmic dynein DHC-1; in regulating centrosome duplication, SPD-2 likely acts together with the ZYG-1 kinase; in both processes, SPD-2 may function to recruit centrosomal components such as ZYG-9 and microtubule-nucleating gamma-tubulin complexes to the developing centrosome; within centrosomes, SPD-2 localizes to both centrioles and the pericentriolar material; efficient centrosomal localization depends upon AIR-1 and DHC-1, while localization specifically to the pericentriolar material depends upon SPD-5.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                 
                                              daf-16 Resveratrol                                                                 

F33H1.2 Aff_F33H1.2 P W All gene names: gpd-4; F33H1.2; F33H1.2.1; F33H1.2.2; 2K461; CE01568; NM_063791; WBGene00001686; WP:CE01568 WormBase description: gpd-4 encodes one of four C. elegans glyceraldehyde-3-phosphate dehydrogenases (GAPDHs); by homology, GPD-4 is predicted to reversibly catalyze the oxidation and phosphorylation of glyceraldehyde-3-phosphate to 1,3-diphosphoglycerate during glycolysis; GPD-4 is required for embryonic and larval development; in C. elegans, GPD-4 and GPD-1 constitute the minor GAPDH isoenzymes and are expressed primarily in embryos, in all cell types. WormBase CDS description: glyceraldehyde 3-phosphate dehydrogenase 4
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, Reinke et al 2004,                               
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

F37B1.8 Aff_F37B1.8 P W All gene names: gst-19; F37B1.8; 2N916; CE09995; NM_064463; WBGene00001767; WP:CE09995 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              Bishop et al 2004  T1 Upregulated in                              
                                              vhl-1 vs WT, Custodia et al 2001  T2                                               
                                              Glut-S-transferase, Wang et al 2003  S6 removed genes                              
                                              of contamination                                                                   

F40F12.5 Aff_F40F12.5 P W All gene names: F40F12.5; 3K988; CE36647; WBGene00009594; WP:CE36647 WormBase description: F40F12.5 is orthologous to the human gene CYLINDROMATOSIS (TURBAN TUMOR SYNDROME) (CYLD; OMIM:605018), which when mutated leads to disease. WormBase CDS description: Ubiquitin carboxyl-terminal hydrolases family 2
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F43D9.4 Aff_F43D9.4 P W All gene names: sec-1; sip-1; F43D9.4; F43D9.4.1; F43D9.4.2; 3L596; CE00994; NM_066915; SIP/1; WBGene00004798; WP:CE00994 WormBase description: Heat shock hsp20 proteins
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, Fig2b shared                                     
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster E, Romagnolo et al 2002  Fig2a heat                               
                                              shock, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F46A9.4 Aff_F46A9.4 P W All gene names: skr-2; F46A9.4; 1K47; CE10578; NM_060111; WBGene00004808; WP:CE10578 WormBase description: skr-2 encodes a homolog of Skp1 in S. cerevisiae, a core component of the SCF (Skp1p, Cullin, F-box) ubiquitin-ligase complex that facilitates ubiquitin-mediated protein degradation; SKR-2 is required for the restraint of cell proliferation, progression through the pachytene stage of meiosis, and the formation of bivalent chromosomes at diakinesis; SKR-2::GFP is detected exclusively in the intestine. WormBase CDS description: cyclin A/CDK2-associated protein P19 like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, list of                             
                                              genes in cluster order, Reinke et al 2004, wt males vs                             
                                              glp4 male enriched , Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F48E8.7 Aff_F48E8.7 P W All gene names: skpt-1; F48E8.7; 3G536; CE01959; CE28404; WBGene00018613; WP:CE01959; WP:CE28404 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains leucine-rich repeats.
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig2 cyclin-genes,                              
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F52E1.1 Aff_F52E1.1 P W All gene names: pos-1; F52E1.1; 5I895; CE04629; NM_072771; WBGene00004078; WP:CE04629 WormBase description: pos-1 encodes a CCCH-type zinc-finger protein; during embryogenesis, maternally provided POS-1 is essential for proper fate specification of germ cells, intestine, pharynx, and hypodermis; POS-1's role in cell fate specification is likely as a translational regulator, as POS-1 is required, in posterior blastomeres, for positive regulation of apx-1 mRNA translation and negative regulation of glp-1 mRNA translation via direct binding to the spatial control region (SCR) in the glp-1 mRNA 3' UTR; in regulating mRNA translation, POS-1 interacts with SPN-4, an RNP-type RNA binding protein, that may function to negatively regulate POS-1 activity; pos-1 mRNA is first detected in the gonads of L4 and adult animals, and is present uniformly in oocytes and newly fertilized embryos; during early embryonic divisions, pos-1 mRNA is present at higher levels in germline blastomeres until it disappears following the division of P4; POS-1 protein is first apparent at low levels in 1-cell embryos, with subsequent expression mirroring that of pos-1 mRNA: high levels in germline blastomeres until its disappearance after the P4 division; in the germline blastomeres P1, P2, P3, and P4, POS-1 colocalizes with cytoplasmic and perinuclear P granules. WormBase CDS description: zinc-finger protein
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004,                                
                                              list of genes in cluster E, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated, Wang et al 2003  S6 removed genes of                            
                                              contamination                                                                      

F54C9.8 Aff_F54C9.8 P W All gene names: puf-5; F54C9.8; 2I867; CE02258; NM_063413; WBGene00004241; WP:CE02258 WormBase description: Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain) (6 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, Fig2b shared                                   
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

F55C12.5 Aff_F55C12.5 P W All gene names: F55C12.5; 2G158; CE28453; CE28454; CE31960; WBGene00018872; WP:CE28453; WP:CE28454; WP:CE31960
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F56A3.2 Aff_F56A3.2 P W All gene names: F56A3.2; 1F753; CE11216; WBGene00018909; WP:CE11216
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

F56D1.7 Aff_F56D1.5 P W All gene names: daz-1; F56D1.7; 2F747; CE27175; NM_062635; WBGene00000935; WP:CE27175 WormBase description: daz-1 encodes a protein containing an RNA recognition motif that is required for the progression of meiosis during oogenesis; expressed in the germline and expression levels peak in the proximal pachytene region.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

H11L12.1 Aff_H11L12.1 P W All gene names: H11L12.1; CE20957; WBGene00019189; WP:CE20957; XS322
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

K10H10.4 Aff_K10H10.4 P W All gene names: K10H10.4; 2O787; CE16254; WBGene00010760; WP:CE16254
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Shen et al 2005  T1 hif-1 depend hypoxia,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R03C1.1 Aff_R03C1.1 P W All gene names: R03C1.1; 2P194; CE35358; WBGene00010987; WP:CE35358
R09B3.2 Aff_R09B3.2 P W All gene names: R09B3.2; 1M500; CE16307; WBGene00011155; WP:CE16307 WormBase description: RNA recognition motif. (aka RRM, RBD, or RNP domain)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, list of                             
                                              genes in cluster order, Reinke et al 2004, wt males vs                             
                                              glp4 male enriched , Reinke et al 2004, GO categories,                             
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R144.10 Aff_R144.6 P W All gene names: R144.10; 3G92; CE26946; WBGene00020098; WP:CE26946
T02C12.3 Aff_T02C12.3 P W All gene names: T02C12.3; 3F113; CE01063; WBGene00011368; WP:CE01063
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

T02G5.11 Aff_T02G5.11 P W All gene names: T02G5.11; 2H370; CE37039; WBGene00020167; WP:CE37039
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T04D3.1 Aff_T04D3.1 P W All gene names: T04D3.1; 1N894; CE13153; WBGene00011431; WP:CE13153
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T07C4.3 Aff_T07C4.3 P W All gene names: T07C4.3; 3L443; CE00602; CE21158; WBGene00011560; WP:CE00602; WP:CE21158
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              males vs glp4 male enriched , Reinke et al 2004, wt                                
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

T10A3.1 Aff_T10A3.1 P W All gene names: rim-1; unc-10; T10A3.1; CE30169; CE31234; NM_171720; WBGene00006750; WP:CE30169; WP:CE31234; XH892 WormBase description: unc-10 encodes a protein with zinc-finger, Q/N-rich, PDZ, and C2 domains that is homologous to vertebrate Rim1, a presynaptic protein which binds, and effects the activity of, synaptic vesicle-associated GTP-Rab3; UNC-10 is required for normal locomotion and synaptic transmission, and localizes to a subdomain of presynaptic termini, where it probably acts to regulate the priming step of presynaptic vesicle fusion by promoting conformational changes in syntaxin.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

T16G1.8 Aff_T16G1.8 P W All gene names: grl-2; T16G1.8; 5N425; CE20078; NM_073837; WBGene00001711; WP:CE20078
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

T16G12.5 Aff_T16G12.5 P W All gene names: T16G12.5; 3L157; CE23986; WBGene00011806; WP:CE23986
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                 
                                              daf-16 Resveratrol                                                                 

T23B12.6 Aff_T23B12.6 P W All gene names: T23B12.6; 5I938; CE14036; WBGene00020721; WP:CE14036
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

T24D1.2 Aff_T24D1.2 P W All gene names: T24D1.2; T24D1.2.1; T24D1.2.2; 1K530; CE29600; WBGene00011985; WP:CE29600 WormBase description: Zinc finger, C3HC4 type (RING finger) (2 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

W02A2.7 Aff_W02A2.G P W All gene names: mex-5; W02A2.7; 4O119; CE21237; NM_070165; WBGene00003230; WP:CE21237 WormBase description: mex-5 encodes a novel protein that contains two CCCH zinc finger motifs; maternally provided MEX-5, which functions partly redundantly with the highly similar CCCH finger protein MEX-6, is essential for transducing polarity cues and establishing soma/germline asymmetry in the early embryo; in regulating soma/germline asymmetry, MEX-5 interacts with, and activates, the SOCS-box protein ZIF-1, which functions as part of an E3 ubiquitin ligase complex that degrades germ plasm proteins in somatic blastomeres; accordingly, ectopic expression of MEX-5 throughout the early embryo results in reduced expression of germline proteins in germline blastomeres; MEX-5 is a cytoplasmic protein expressed at uniform levels in oocytes and newly fertilized eggs; from the 1-cell to 4-cell stages of embryogenesis, MEX-5 expression is dynamic, with highest levels seen in the anterior AB blastomere and, for a time, its daughters, the anterior portion of the P1 blastomere, P1 centrosomes (both, then posterior only), and the EMS and C blastomeres; the asymmetric distribution of MEX-5 in early embryos depends upon wild-type activity of the PAR and OMA-1 proteins. WormBase CDS description: Zinc finger C-x8-C-x5-C-x3-H type (and similar).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

W03C9.7 Aff_W03C9.7 P W All gene names: mel-21; mex-1; W03C9.7; W03C9.7.1; W03C9.7.2; 2M261; CE28097; NM_064150; WBGene00003228; WP:CE28097 WormBase description: mex-1 encodes a CCCH-type zinc-finger protein that is required maternally for segregation of P granules, germ cell formation, and somatic cell differentiation in the early embryo; MEX-1 is expressed cytoplasmically in germ line blastomeres, is a component of P granules, and is required for restricting PIE-1 expression and function to these cells; mex-1 mRNA transcripts are also transiently associated with P granules. WormBase CDS description: Zinc finger C-x8-C-x5-C-x3-H type (and similar). (2 domains)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Jones et al 2001  T3 20 most abundant                                      
                                              Mixed-stage, Reinke et al 2004, Fig2b shared gemlines,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, Reinke et al 2004, list of genes in                             
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

W03F11.1 Aff_W03F11.1 P W All gene names: W03F11.1; 1C788; CE14542; WBGene00021005; WP:CE14542
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes,                                
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

W05B10.1 Aff_W05B10.1 P W All gene names: W05B10.1; 5N140; CE06544; WBGene00012276; WP:CE06544 WormBase description: Core histones H2A, H2B, H3 and H4
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

W05F2.3 Aff_W05F2.3 P W All gene names: W05F2.3; 1D936; CE14616; WBGene00021035; WP:CE14616
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Jones et al 2001  T3 20 most abundant                                      
                                              Mixed-stage, Reinke et al 2004, fem1 enriched genes,                               
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004,                                
                                              list of genes in cluster E, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated, Wang et al 2003  S6 removed genes of                            
                                              contamination                                                                      

W06B4.1 Aff_W06B4.1 P W All gene names: W06B4.1; 2E763; CE02890; WBGene00021056; WP:CE02890
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

W07A8.2 Aff_W07A8.2 P W All gene names: W07A8.2; 5V188; CE18340; CE32002; WBGene00012319; WP:CE18340; WP:CE32002 WormBase description: Ank repeat (4 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, GO                              
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

Y14H12B.2 Aff_Y14H12B_90.A P W All gene names: Y14H12B.2; 2E222; CE21366; WBGene00021192; WP:CE21366
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              F, Reinke et al 2004, Fig2b shared gemlines, Reinke et                             
                                              al 2004, list of genes in cluster order, Reinke et al                              
                                              2004, intrinsic, Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

Y17G7A.1 Aff_Y17G7A.1 P W All gene names: hmg-12; hmg-I-beta; Y17G7A.1; Y17G7A.1.1; Y17G7A.1.2; 2M207; CE21378; NM_064143; WBGene00001977; WP:CE21378
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

Y19D10A.16 Aff_C01B4.H P W All gene names: Y19D10A.16; WBGene00044734
Y34D9A.4 Aff_Y34D9A_151.B P W All gene names: spd-1; Y34D9A.4; 1B504; CE37061; NM_058408; WBGene00004952; WBGene00021330; WP:CE37061 WormBase description: spd-1 encodes a homolog of human PRC1, tobacco MAP-65, and S. cerevisiae Ase1p that is required for embryonic viability due to its requirement for mitotic spindle stability during the late stages of cytokinesis; SPD-1 is also required for fertility, gonad development, locomotion, and vulval development.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, Fig2b shared gemlines,                               
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

Y39B6A.12 Aff_B0413.F P W All gene names: Y39B6A.12; Y39B6B.T; Y39B6B.U; 5T594; CE29855; CE38444; WBGene00012674; WP:CE29855; WP:CE38444
Y47G6A.2 Aff_Y47G6A_232.A P W All gene names: inx-22; Y47G6A.2; Y47G6A.2.1; Y47G6A.2.2; 1E179; CE39849; NM_058785; WBGene00002144; WP:CE39849
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E                                                                          

Y47G6A.25 Aff_Y47G6A_240.C P W All gene names: Y47G6A.25; Y47G6A_240.C; 1E176; CE34403; WBGene00021649; WP:CE34403
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, intrinsic, Reinke et al                                 
                                              2004, Fig2b shared gemlines, Reinke et al 2004, wt vs                              
                                              glp-4 enriched genes, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, wt males vs glp4                              
                                              male enriched , Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E                                                                          

Y54G9A.5 Aff_Y54G9A.5 P W All gene names: Y54G9A.5; 2O13; CE20321; WBGene00013208; WP:CE20321
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

Y65B4BL.2 Aff_Y65B4B_13.B P W All gene names: Y65B4BL.2; Y65B4BL.2.1; Y65B4BL.2.2; 1A981; CE25536; WBGene00022034; WP:CE25536
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

ZC410.3 Aff_ZC410.3 P W All gene names: ZC410.3; 4J842; CE03807; WBGene00013881; WP:CE03807 WormBase description: Man(9)-alpha-mannosidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

ZK1098.8 Aff_ZK1098.8 P W All gene names: mut-7; ZK1098.8; 3K630; CE00370; NM_066704; WBGene00003504; WP:CE00370 WormBase description: mut-7 encodes a homolog of RnaseD that represses transposition of Tc1, Tc3, Tc4, and Tc5, perhaps by degrading transposon-specific messages; also affects sperm development, sensitivity to RNAi of mainly germline expressed genes, silencing of some germline transgenes, X chromosome loss, and is required for cosuppression (functional silencing of chromosomal loci induced by transgenes) and for silencing induced by antisense RNA oligomers; cellular fractionation experiments indicate that MUT-7 is expressed in adult worms, and resides in a complex in both the cytosol and nucleus; in the cytosolic complex, MUT-7 interacts with RDE-2, a novel protein also required for RNA interference. WormBase CDS description: ribonuclease D
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

ZK1127.1 Aff_ZK1127.1 P W All gene names: nos-2; ZK1127.1; 2H357; CE05121; NM_063051; WBGene00003784; WP:CE05121 WormBase description: nos-2 encodes one of three genes in C. elegans that contains a putative zinc-binding domain similar to the one found in Drosophila nanos; nos-2 affects incorporation of primordial germ cells into the somatic gonad, is required redundantly with nos-1 to prevent primordial germ cells from dividing in starved animals and to maintain germ cell viability during larval development in hermaphrodites and in males, and also functions together with nos-1 and nos-3 in the hermaphrodite switch from spermatogenesis to oogenesis; nos-2 is expressed in the primordial germ cells around the time of gastrulation from a maternal RNA associated with P granules, and it is expressed coordinately with nos-1in a dynamic fashion until the embryonic 200-cell stage.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, list of genes in cluster E, Wang et al 2003                               
                                              S6 removed genes of contamination                                                  

ZK1248.13 Aff_ZK1248.12 P W All gene names: ZK1248.13; 2G120; CE33497; WBGene00022882; WP:CE33497
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

ZK546.15 Aff_ZK546.15 P W All gene names: try-1; ZK546.15; 2F238; CE36075; NM_062509; WBGene00006619; WP:CE36075 WormBase description: Plasminogen
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, Reinke et al 2004, list of                              
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

ZK858.3 Aff_ZK858.3 P W All gene names: ZK858.3; 1J702; CE15425; WBGene00014117; WP:CE15425 WormBase description: lectin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, Fig2b shared                                   
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated