Reinke et al 2004, GO categories, 1386 genes

Gene list file name:Reinke2004_Fig3_GO_categories.txt
Type of gene identifier:Cosmid name
Description:Reinke et al 2004, Fig3 GO categories  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AC3.7 AC3.7 P W All gene names: dod-15; ugt-1; AC3.7; 5K877; CE05137; NM_073270; WBGene00007072; WP:CE05137 WormBase description: UDP-glucuronosyltransferase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Murphy et al 2003  Fig2 Class1                                   
                                              elongate lifespan, ReichertK et al 2005  T1 xenobiotic                             
                                              induced UDP-gl, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, herm soma enriched                               
                                              genes, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, list of genes in cluster B, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

AC8.2 AC8.2 P W All gene names: AC8.2; AC8.B; WBGene00007074; XA867
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, GO categories, Reinke                            
                                              et al 2004, list of genes in cluster D, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

AH10.1 AH10.1 P W All gene names: AH10.1; 5O629; CE07655; WBGene00007082; WP:CE07655 WormBase description: 4-coumarate:coenzyme A ligase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0024.11 B0024.11 P W All gene names: B0024.11; 5K798; CE05155; WBGene00007101; WP:CE05155 WormBase description: Uncharacterized protein family UPF0024
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

B0035.10 B0035.10 P W All gene names: his-45; B0035.10; 4M91; NM_069733; WBGene00001919; his 9 WormBase description: his-45 encodes an H3 histone. WormBase CDS description: histone H3
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories                                                          

B0035.12 B0035.12 P W All gene names: B0035.12; B0035.12.1; B0035.12.2; 4M96; CE05167; WBGene00007111; WP:CE05167 WormBase description: polyadenylate-binding protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

B0035.7 B0035.7 P W All gene names: his-47; B0035.7; 4M88; NM_069730; WBGene00001921; his 12 WormBase description: his-47 encodes an H2A histone; by homology, HIS-47 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-47 is a replication-dependent histone locus that resides in a histone gene-rich region on chromosome IV. WormBase CDS description: histone H2A
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

B0047.3 B0047.3 P W All gene names: bath-24; B0047.3; 2C330; CE07675; WBGene00015014; WP:CE07675
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

B0207.1 B0207.1 P W All gene names: B0207.1; 1G541; CE36625; WBGene00015026; WP:CE36625 WormBase description: protein-tyrosine phophatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, fem3 enriched                              
                                              genes                                                                              

B0207.7 B0207.7 P W All gene names: B0207.7; 1G522; CE07685; WBGene00015030; WP:CE07685 WormBase description: serine/threonine-protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

B0213.8 str-82 P W All gene names: str-82; B0213.8; 5E453; CE35206; NM_071704; WBGene00006141; WP:CE35206 WormBase description: 7TM chemoreceptor, str family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes                                             

B0218.5 B0218.5 P W All gene names: B0218.5; 4I920; CE06688; WBGene00015049; WP:CE06688 WormBase description: ser/thr kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt herm enriched gen, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0244.9 B0244.9 P W All gene names: B0244.9; 3G820; CE01756; WBGene00015084; WP:CE01756
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, list of                             
                                              genes in cluster order, Reinke et al 2004, wt males vs                             
                                              glp4 male enriched , Reinke et al 2004, GO categories,                             
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0273.2 puf-7 P W All gene names: puf-7; B0273.2; B0273.2.1; B0273.2.2; 4G253; CE16788; NM_068419; WBGene00004243; WP:CE16788 WormBase description: puf-7 encodes a protein 97% identical to PUF-6 and functions redundantly with the other PUF genes, fbf-1, fbf-2, puf-6, and puf-8, during primordial germ cell development, based on combinatorial RNAi; interacts with NOS-2 in yeast two-hybrid screens.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0280.5 B0280.5 P W All gene names: B0280.5; 3I192; CE31868; WBGene00015102; WP:CE31868 WormBase description: B0280.5 encodes a protein with a chitin binding peritrophin-A domain that is required, in conjunction with CEJ-1, for early embryonic development; B0280.5 mRNA is expressed specifically in the adult hermaphrodite germ line, is a direct target of GLD-1, and has an RNAi phenotype consistent with the hypothesis that B0280.5 is an effector of GLD-1 in the germline.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, IVb male                                
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination                                                                      

B0281.5 B0281.5 P W All gene names: B0281.5; 2C588; CE07716; WBGene00015112; WP:CE07716
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001 Fig1                                             
                                              hermaphrodite-enriched neuro, Jones et al 2001  Non                                
                                              dauer genes P<0.05, Murphy et al 2003  Fig2 Class2                                 
                                              shorten lifespan, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, intrinsic, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, list of genes in                                 
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

B0334.8 age-1 P W All gene names: age-1; daf-23; B0334.8; 2L810; CE23506; NM_064061; WBGene00000090; WP:CE23506 WormBase description: age-1 encodes the C. elegans ortholog of the phosphoinositide 3-kinase (PI3K) p110 catalytic subunit; AGE-1, supplied maternally and embryonically, is a central component of the C. elegans insulin-like signaling pathway, lying downstream of the DAF-2/insulin receptor and upstream of both the PDK-1 and AKT-1/AKT-2 kinases and the DAF-16 forkhead type transcription factor, whose negative regulation is the key output of the insulin signaling pathway; in accordance with its role in insulin signaling, AGE-1 activity is required for regulation of metabolism, life span, dauer formation, stress resistance, fertility, and embryonic development; although the age-1 expression pattern has not yet been reported, ectopic expression studies indicate that pan-neuronal age-1 expression is sufficient to rescue life-span defects, while neuronal, intestinal, or muscle expression can partially rescue dauer formation, and neuronal or muscle expression can rescue metabolic defects. WormBase CDS description: phosphatidylinositol 3-kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T2 lifespan and                                 
                                              Dauer, McCarroll et al 2004  SFig1-4 conserved w/                                  
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, ViswanathanM et al 2005  S2                               
                                              sir-2.1 regulated                                                                  

B0361.7 B0361.7 P W All gene names: B0361.7; 3I374; CE32100; WBGene00015161; WP:CE32100 WormBase description: Acid phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

B0365.1 B0365.1 P W All gene names: B0365.1; 5N599; CE07719; WBGene00007150; WP:CE07719 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: ATP citrate lyase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0365.3 eat-6 P W All gene names: eat-6; spa-1; B0365.3; B0365.3.1; B0365.3.2; 5N608; CE07721; NM_073868; NaK/1; WBGene00001137; WP:CE07721 WormBase description: eat-6 encodes an ortholog of the alpha subunit of a sodium/potassium ATPase, which in turn affects Na+,K(+)-ATPase activity of membranes by affecting the level of the phosphorylated intermediate of the Na+,K(+)-ATPase; EAT-6 affects relaxation of the pharyngeal muscles, fertility (and thus affects feeding); EAT-6 also affects body length, life span, and ASE, ASI and ASJ axonal outgrowth. WormBase CDS description: Na(+)/K(+) ATPase alpha subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0414.3 B0414.3 P W All gene names: hil-5; B0414.3; 1G351; CE07733; NM_059277; WBGene00001856; WP:CE07733 WormBase description: histone H1
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0414.6 glh-3 P W All gene names: glh-3; B0414.6; 1G370; CE07736; NM_059280; WBGene00001600; WP:CE07736 WormBase description: glh-3 encodes a predicted DEAD-like RNA helicase; GLH-3 interacts with itself and with CSN-5, KGB-1, ZYX-1, and GLH-1 in vitro, and is expressed in association with P granules throughout development. WormBase CDS description: RNA helicase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0432.11 B0432.11 P W All gene names: B0432.11; 2A582; CE07749; WBGene00015192; WP:CE07749
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, fem3 enriched genes, Reinke et al 2004,                                
                                              shared sperm                                                                       

B0432.4 B0432.4 P W All gene names: B0432.4; 2A577; CE32102; WBGene00015186; WP:CE32102 WormBase description: mitochrondrial 2-oxoglutarate/malate carrier protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

B0491.7 B0491.7 P W All gene names: B0491.7; 2L641; CE02109; WBGene00007194; WP:CE02109 WormBase description: B0491.7 encodes a putative diphthine synthase orthologous to S. cerevisiae DPH5; DPH5 is an S-adenosylmethionine:EF-2 methyltransferase required for the enzymatic conversion of 3-amino-3-carboxypropyl-histidine to diphthine; DPH5 adds at least the last two of the three methyl groups present in diphthine, and is homologous to bacterial AdoMet:uroporphyrinogen III methyltransferases. WormBase CDS description: diphthine synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0495.2 B0495.2 P W All gene names: B0495.2; 2H991; CE01761; WBGene00015203; WP:CE01761 WormBase description: CDC2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

B0496.1 B0496.1 P W All gene names: B0496.1; 4I209; CE06713; WBGene00015210; WP:CE06713
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt herm enriched gen, Reinke et al                             
                                              2004, fem3 enriched genes, Reinke et al 2004, wt males                             
                                              vs glp4 male enriched , Reinke et al 2004, mixed sperm                             
                                              soma, Reinke et al 2004, list of genes in cluster D,                               
                                              Reinke et al 2004, GO categories, Romagnolo et al 2002                             
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0496.2 B0496.2 P W All gene names: B0496.2; 4I215; CE06714; WBGene00015211; WP:CE06714
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              list of genes in cluster D, Reinke et al 2004, fem3                                
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

B0511.4 B0511.4 P W All gene names: tag-344; B0511.4; 1L223; CE17343; WBGene00015230; WP:CE17343 WormBase description: protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

B0523.1 B0523.1 P W All gene names: CEHD-9; kin-31; B0523.1; 3J761; CE33023; NM_066511; WBGene00002212; WP:CE33023 WormBase description: kin-31 encodes a predicted tyrosine protein kinase expressed in the nucleus and cytoplasm of body-wall muscle cells; the expression of kin-31 was experimentally verified by RT-PCR. WormBase CDS description: Tyrosine kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, spermatogenesis                                
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, shared                                  
                                              sperm, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

B0563.7 B0563.7 P W All gene names: B0563.7; CE02445; WBGene00015264; WP:CE02445; XJ770 WormBase description: Calmodulin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

B0564.1 B0564.1 P W All gene names: tin-9.2; B0564.1; 4N865; CE20469; CE37950; NM_070119; WBGene00007201; WBGene00044083; WP:CE20469; WP:CE37950 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0564.7 B0564.7 P W All gene names: B0564.7; B0564.7.1; B0564.7.2; 4N867; CE36971; WBGene00007207; WP:CE36971 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, GO categories, Reinke                            
                                              et al 2004, list of genes in cluster E, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

C01B10.8 C01B10.8 P W All gene names: C01B10.8; C01B10.8.1; C01B10.8.2; 4H401; CE06739; WBGene00015282; WP:CE06739
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C01B10.9 C01B10.9 P W All gene names: C01B10.9; 4H399; CE37181; WBGene00015283; WP:CE37181
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C01B12.8 C01B12.8 P W All gene names: C01B12.8; CE07796; NM_061235; WBGene00015291; WP:CE07796
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories                                                                

C01G10.10 C01G10.10 P W All gene names: C01G10.10; 5P562; CE20480; WBGene00007237; WP:CE20480 WormBase description: O-sialoglycoprotein endopeptidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C01G10.14 C01G10.14 P W All gene names: C01G10.14; 5P586; CE07823; WBGene00007239; WP:CE07823
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              neuronal, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, shared sperm, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C01G12.8 C01G12.8 P W All gene names: C01G12.8; 2O883; CE15577; WBGene00007248; WP:CE15577 WormBase description: sodium/potasssium transporting ATPase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C01G5.6 C01G5.6 P W All gene names: C01G5.6; 4H289; CE23513; WBGene00015308; WP:CE23513
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang                             
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0, Wang et al 2003                               
                                              S4 Dauer Enriched                                                                  

C01G6.7 C01G6.7 P W All gene names: C01G6.7; 2J583; CE00869; WBGene00007228; WP:CE00869 WormBase description: 4-coumarate-coA ligase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, fem3 enriched genes,                             
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              list of genes in cluster D, Reinke et al 2004, GO                                  
                                              categories, Wang et al 2003  S3  genes pass one-way                                
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

C01G8.3 C01G8.3 P W All gene names: dhs-1; C01G8.3; 1F848; CE07803; NM_059156; WBGene00000965; WP:CE07803 WormBase description: oxidoreductase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C01H6.9 C01H6.9 P W All gene names: C01H6.9; 1H806; CE07824; WBGene00007258; WP:CE07824 WormBase description: C01H6.9 encodes a homolog of haploid germ cell-specific nuclear protein kinase (haspin) that specifically binds GOA-1 in yeast two-hybrid assays; C01H6.9 is expressed in PHB sensory neurons and PVT interneurons in the tail, several unidentified neurons in the head (with projections to the nose and nerve ring), and intestinal cells, with mainly nuclear localization; C01H6.9 has no obvious function or phenotype in RNAi assays, either alone or with inactivation of a close paralog (F22H10.5). WormBase CDS description: Eukaryotic protein kinase domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, Romagnolo et al 2002  Fig3b Unkown                                     

C02B10.4 C02B10.4 P W All gene names: C02B10.4; C02B10.4.1; C02B10.4.2; 4F857; CE16801; WBGene00015329; WP:CE16801
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C02B10.6 C02B10.6 P W All gene names: C02B10.6; 4F837; CE20481; WBGene00015331; WP:CE20481
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C02B4.1 C02B4.1 P W All gene names: adt-1; C02B4.1; CE31872; NM_077715; WBGene00000082; WP:CE31872; XN303 WormBase description: The adt-1 gene encodes a metalloproteinase with disintegrin-like and metalloproteinase with thrombospondin type I motifs (ADAMTS) that is required for male tail morphogenesis. WormBase CDS description: TSP type-1 repeats (13)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C03A7.13 C03A7.13 P W All gene names: C03A7.13; 5F668; CE07871; WBGene00015371; WP:CE07871
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, herm soma enriched genes, Wang et al                            
                                              2003  S4 TransientList, Wang et al 2003  S3  genes pass                            
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C03C10.3 C03C10.3 P W All gene names: rnr-2; C03C10.3; C03C10.3.1; C03C10.3.2; C03C10.3.3; 3F184; CE00874; NM_065420; WBGene00004392; WP:CE00874 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Ribonuclease-diphosphate reductase M2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, GO                                  
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C03D6.3 cel-1 P W All gene names: cel-1; C03D6.3; 1K243; CE05197; CE32300; NM_060168; WBGene00000466; WP:CE05197; WP:CE32300 WormBase description: cel-1 encodes a mRNA capping enzyme, with a N-terminal region with RNA triphosphatase activity and a C-terminal region containing motifs found in yeast and vaccinia virus capping enzyme guanylytransferases; cel-1 is required for embryonic viability, body morphology, and vulval development.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, intrinsic, Reinke et al 2004, wt vs glp-4                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S8 SAGE genes in the dauer                             
                                              exit, Wang et al 2003  S7 SAGE genes in the dataset                                

C04A11.3 C04A11.3 P W All gene names: tag-334; C04A11.3; CE07905; WBGene00007287; WP:CE07905; XO299 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories                                                          

C04B4.2 C04B4.2 P W All gene names: C04B4.2; CE05204; WBGene00007290; WP:CE05204; XM903
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C04F12.9 C04F12.9 P W All gene names: C04F12.9; 1K286; CE19682; WBGene00007303; WP:CE19682 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , Lund et al 2002  Fig3D Oocyte-en,                             
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, mixed oogenesis soma, Reinke et al 2004, GO                                  
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C04G2.10 C04G2.10 P W All gene names: C04G2.10; 4K881; CE05218; WBGene00007309; WP:CE05218
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, ViswanathanM et al                              
                                              2005  S2 daf-16 Resveratrol                                                        

C04G2.2 C04G2.2 P W All gene names: C04G2.2; 4K855; CE05212; WBGene00007305; WP:CE05212 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, list of genes in                                 
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C04G2.4 msp-36 P W All gene names: msp-36; C04G2.4; 4K861; NM_069433; WBGene00003432 WormBase description: msp-36 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family comprises of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSP is involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSP assembles into fibrous networks that drives movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C04G2.6 C04G2.6 P W All gene names: dis-3; tag-128; C04G2.6; 4K869; CE05214; NM_069434; WBGene00001001; WP:CE05214 WormBase description: S.pombe mitotic control protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C04H5.6 mog-4 P W All gene names: mog-4; C04H5.6; 2O840; CE15592; NM_064626; WBGene00003392; WP:CE15592 WormBase description: The mog-4 gene encodes a DEAH helicase orthologous to the Drosophila CG10689 and the S. cerevisiae PRP2 proteins. WormBase CDS description: Helicases conserved C-terminal domain
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes                                      

C05B10.1 lip-1 P W All gene names: lip-1; C05B10.1; 4H607; CE31151; NM_068652; WBGene00003043; WP:CE31151 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

C05C10.4 C05C10.4 P W All gene names: C05C10.4; 2K223; CE17370; WBGene00007331; WP:CE17370 WormBase description: acid phosphatase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, McElwee et al 2003  T1 targets of                                  
                                              daf-16, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

C05C12.1 C05C12.1 P W All gene names: C05C12.1; 4M19; CE02965; WBGene00007335; WP:CE02965 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004,                                
                                              list of genes in cluster D, Reinke et al 2004, GO                                  
                                              categories, Reinke et al 2004, shared sperm                                        

C05C8.5 C05C8.5 P W All gene names: C05C8.5; 5H714; CE07923; WBGene00015462; WP:CE07923
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C05C8.6 C05C8.6 P W All gene names: C05C8.6; 5H716; CE07924; WBGene00015463; WP:CE07924
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, intrinsic, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C05C8.7 C05C8.7 P W All gene names: phi-49; C05C8.7; C05C8.7.1; C05C8.7.2; C05C8.7.3; C05C8.7.4; 5H724; CE07925; WBGene00015464; WP:CE07925 WormBase description: mannose-6-phosphate isomerase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, herm soma enriched                               
                                              genes, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, list of genes in cluster B, Romagnolo et al 2002                             
                                              Fig3b Metabolism, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C05D11.3 C05D11.3 P W All gene names: tag-170; C05D11.3; 3H521; CE01133; WBGene00006515; WBGene00015482; WP:CE01133
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C05E4.11 srj-24 P W All gene names: srj-24; C05E4.11; 5B214; CE07944; NM_070908; WBGene00005612; WP:CE07944 WormBase description: 7TM chemoreceptor, srj family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes                                             

C05G6.1 nhr-76 P W All gene names: nhr-76; C05G6.1; 4B385; CE37476; NM_067560; WBGene00015497; WP:CE37476
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes                                                                              

C06A1.1 C06A1.1 P W All gene names: cdc-48.1; phi-31; C06A1.1; 2K850; CE02114; NM_063872; WBGene00007352; WP:CE02114 WormBase description: transitional endoplasmic reticulum ATPase homolog 1 (P97 protein)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C06A1.3 C06A1.3 P W All gene names: C06A1.3; 2K863; CE02116; WBGene00007354; WP:CE02116 WormBase description: serine/threonine protein phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C06A1.5 C06A1.5 P W All gene names: C06A1.5; 2K871; CE02117; WBGene00007355; WP:CE02117 WormBase description: DNA directed RNA polymerase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C06A6.1 C06A6.1 P W All gene names: C06A6.1; WBGene00043107
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, GO categories                                           

C06G3.2 C06G3.2 P W All gene names: klp-18; C06G3.2; 4H807; CE07978; NM_068692; WBGene00002228; WP:CE07978 WormBase description: klp-18 encodes a kinesin motor protein whose motor domain is most similar to that of the Xenopus and human klp2 proteins; loss of klp-18 activity via RNAi indicates that KLP-18 is required for the assembly of a disordered array of acentrosomal (female meiotic) microtubules into an organized, functional, bipolar spindle; in addition, KLP-18 may also play a role in cortex dynamics during post-meiotic development; antibody staining indicates that during meiosis and mitosis (early embryonic) KLP-18 localizes to: 1) spindles, and especially spindle poles, during prometaphase, metaphase, and early anaphase, and 2) the interzone during late anaphase and telophase; in early embryos, KLP-18 is also seen around the nucleus and cell cortex at sites of cell-cell contact; KLP-18 expression in later embryos and larvae is confined to the germ line which, in adults, stains brightly in both distal and proximal regions. WormBase CDS description: kinesin-like protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, Romagnolo et al 2002  Fig3b Cell Structure                             

C06G3.8 C06G3.8 P W All gene names: C06G3.8; 4H796; CE07984; WBGene00015554; WP:CE07984
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C07A12.5 C07A12.5 P W All gene names: spr-3; C07A12.5; CE36266; CE36267; WBGene00005008; WP:CE36266; WP:CE36267; XF135 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Reinke et al 2004, fem1                                 
                                              enriched genes, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, mixed oogenesis soma,                            
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              list of genes in cluster E, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated                                                                  

C07A9.11 C07A9.11 P W All gene names: ncx-7; C07A9.11; 3K806; CE39219; NM_066746; WBGene00003572; WP:CE39219 WormBase description: Na/Ca, K antiporter
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, wt herm vs wt male                                    
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, Reinke et al 2004, GO categories, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated, Wang et al 2003  S4                              
                                              TransientList, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S4 genes pass two-wayANOVA P0                                                     

C07A9.2 C07A9.2 P W All gene names: C07A9.2; C07A9.2.1; C07A9.2.2; 3J784; 3K784; CE00499; WBGene00007400; WP:CE00499 WormBase description: G10 protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories                                                                         

C07A9.5 C07A9.5 P W All gene names: C07A9.5; 3K770; CE02981; WBGene00007401; WP:CE02981 WormBase description: Actin-binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, spermatogenesis enriched genes, Reinke et al                              
                                              2004, fem3 enriched genes, Reinke et al 2004, wt vs                                
                                              glp-4 enriched genes, Reinke et al 2004, list of genes                             
                                              in cluster D, Reinke et al 2004, GO categories,                                    
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C07E3.4 C07E3.4 P W All gene names: C07E3.4; 2K653; CE02120; WBGene00007415; WP:CE02120 WormBase description: Protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C07G2.1 cej-1 P W All gene names: cej-1; C07G2.1; C07G2.1a.1; C07G2.1a.2; 3F579; CE00665; CE33971; WBGene00000465; WP:CE00665; WP:CE33971 WormBase description: cej-1 encodes a protein with a chitin binding peritrophin-A domain that is required, in conjunction with B0280.5, for early embryonic development; cej-1 mRNA is expressed specifically in the adult hermaphrodite germ line, is a direct target of GLD-1, and has an RNAi phenotype consistent with the hypothesis that CEJ-1 is an effector of GLD-1 in the germline.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C07G3.9 C07G3.9 P W All gene names: ugt-64; C07G3.9; 5D982; CE08000; WBGene00015577; WP:CE08000 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, mixed oogenesis soma, Reinke et al 2004, GO                               
                                              categories                                                                         

C07H6.5 cgh-1 P W All gene names: cgh-1; C07H6.5; C07H6.5.1; C07H6.5.2; 3I586; CE00839; NM_066245; WBGene00000479; WP:CE00839 WormBase description: The ortholog of a RNA helicase ste13/ME31B/RCK/p54 that is required for oocyte and sperm function and the prevention of physiological germline-associated apoptosis; it is expressed in the early embryo and germline and localizes to P granules. WormBase CDS description: ATP-dependent RNA helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              F, Reinke et al 2004, fem1 enriched genes, Reinke et al                            
                                              2004, Fig2b shared gemlines, Reinke et al 2004, list of                            
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt males vs glp4 male                                    
                                              enriched , Reinke et al 2004, wt herm vs wt male                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C08A9.1 sod-3 P W All gene names: sod-3; C08A9.1; CE08002; MnSOD; NM_078363; WBGene00004932; WP:CE08002; XR707 WormBase description: sod-3 encodes a iron/manganese superoxide dismutase, predicted to be mitochondrial, that might defend against oxidative stress and promote normal lifespan; sod-3 mRNA levels are diminished by mutation of daf-16, and heterologously expressed SOD-3 in E. coli protects against methyl viologen-induced oxidative stress. WormBase CDS description: superoxide dismutase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T2 lifespan and                                 
                                              Dauer, Lund et al 2002  Fig4 Mount 15, McElwee et al                               
                                              2003  T1 targets of daf-16, McElwee et al 2003  Fig4                               
                                              daf-16 target lifspan, Murphy et al 2003  Fig2 Class1                              
                                              elongate lifespan, Reinke et al 2004, fem1 enriched                                
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S6 removed genes of contamination                                         

C08B11.1 zyg-11 P W All gene names: zyg-11; C08B11.1; 2I309; CE01471; NM_063276; WBGene00006996; WP:CE01471 WormBase description: Leucine Rich Repeat (2 copies)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C08B11.3 C08B11.3 P W All gene names: C08B11.3; 2I314; CE01473; WBGene00007433; WP:CE01473 WormBase description: Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2 daf-16                            
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C08B11.7 C08B11.7 P W All gene names: ubh-4; C08B11.7; 2I328; CE36913; NM_063283; WBGene00006724; WP:CE36913 WormBase description: thiolesterase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C08B6.8 C08B6.8 P W All gene names: C08B6.8; 5K621; CE05245; WBGene00007429; WP:CE05245 WormBase description: YJER protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C08B6.9 C08B6.9 P W All gene names: aos-1; C08B6.9; 5K608; CE05246; NM_073203; WBGene00000142; WP:CE05246 WormBase description: aos-1 encodes the C. elegans ortholog of Saccharomyces cerevisiae Aos1p and human SUMO-1 activating enzyme E1 N subunit; by homology, AOS-1 is predicted to form, with a catalytic subunit, UBA-2, a heterodimeric enzyme that activates the ubiquitin-like protein SMO-1/SUMO in preparation for its covalent attachment to target proteins to regulate their subcellular localization and/or stability; in C. elegans, AOS-1 is required for embryonic and larval development, as well as for proper Hox gene regulation; uba-2/aos-1(RNAi) animals that survive embryogenesis show ectopic expression of EGL-5 and ectopic anterior sensory ray formation. WormBase CDS description: ubiquitin activating enzyme
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C08F8.2 C08F8.2 P W All gene names: C08F8.2; C08F8.2b.1; C08F8.2b.2; 4L917; CE05249; CE19689; WBGene00007444; WP:CE05249; WP:CE19689 WormBase description: ATP-dependent RNA helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories                                                                         

C08F8.6 C08F8.6 P W All gene names: C08F8.6; 4L926; CE05253; WBGene00007448; WP:CE05253 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C09B9.4 C09B9.4 P W All gene names: C09B9.4; 4F796; CE06796; WBGene00015629; WP:CE06796 WormBase description: ser/thr protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C09B9.6 msp-55 P W All gene names: msp-55; C09B9.6; 4F820; CE06798; NM_068310; WBGene00003448; WP:CE06798 WormBase description: msp-55 encodes a member of the major sperm protein family. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C09G9.6 C09G9.6 P W All gene names: moe-1; oma-1; C09G9.6; C09G9.6.1; C09G9.6.2; 4J655; CE03005; NM_069141; WBGene00003864; WP:CE03005 WormBase description: The oma-1 gene encodes a zinc finger protein of the TIS11 finger type that is paralogous to OMA-2; while either oma-1 or oma-2 individually have no obvious mutant phenotype, a normal copy of at least one of these genes is required for oocyte maturation. WormBase CDS description: Zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S6 removed genes of contamination                                         

C09H5.7 C09H5.7 P W All gene names: C09H5.7; 5I562; CE35227; WBGene00015661; WP:CE35227 WormBase description: phophatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, fem3 enriched genes, Reinke et al 2004,                                
                                              shared sperm                                                                       

C10B5.1 C10B5.1 P W All gene names: C10B5.1; 5J63; CE30722; WBGene00015670; WP:CE30722
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C10C5.5 C10C5.5 P W All gene names: C10C5.5; 4K147; CE36099; WBGene00007509; WP:CE36099 WormBase description: aminoacylase-1
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, GO categories, Reinke et                              
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C10H11.3 C10H11.3 P W All gene names: ugt-25; C10H11.3; 1F303; CE08092; WBGene00015692; WP:CE08092 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, mixed sperm soma, Reinke                             
                                              et al 2004, GO categories, Reinke et al 2004, fem3                                 
                                              enriched genes                                                                     

C10H11.7 C10H11.7 P W All gene names: C10H11.7; CE08096; WBGene00015696; WP:CE08096
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C11D2.4 C11D2.4 P W All gene names: C11D2.4; 4G920; CE31300; WBGene00015702; WP:CE31300
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C12D8.4 C12D8.4 P W All gene names: C12D8.4; 5K706; CE05268; WBGene00007535; WP:CE05268 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, intrinsic, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S8 SAGE genes in the dauer                                 
                                              exit, Wang et al 2003  S7 SAGE genes in the dataset,                               
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0, Wang et                            
                                              al 2003  S4 Dauer Enriched                                                         

C12D8.5 C12D8.5 P W All gene names: C12D8.5; 5K704; CE34156; WBGene00007536; WP:CE34156 WormBase description: 3-chlorobenzoate-3,4-dioxygenase like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C13B9.4 C13B9.4 P W All gene names: C13B9.4; C13B9.4a.1; C13B9.4a.2; C13B9.4b.1; C13B9.4b.2; C13B9.4c.1; C13B9.4c.2; 3H724; CE30860; CE37087; CE37088; WBGene00015735; WP:CE30860; WP:CE37087; WP:CE37088 WormBase description: C13B9.4 is orthologous to the human gene CALCITONIN RECEPTOR (CALCR; OMIM:114131), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, GO categories, ViswanathanM et al 2005  S2 daf-16                            
                                              Resveratrol, Wang et al 2003  S4 TransientList, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

C13F10.7 C13F10.7 P W All gene names: C13F10.7; 5H702; CE08148; WBGene00015746; WP:CE08148
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C14A11.3 C14A11.3 P W All gene names: tag-150; C14A11.3; CE08151; CE30861; WBGene00006496; WBGene00015749; WP:CE08151; WP:CE30861; XD417 WormBase description: guanine-nucleotide releasing factor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, Romagnolo et al 2002  Fig3b                             
                                              Unkown                                                                             

C14A4.13 C14A4.13 P W All gene names: C14A4.13; 2K909; CE02142; WBGene00007563; WP:CE02142 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, fem3 enriched genes, Reinke et al 2004,                                
                                              shared sperm                                                                       

C14A4.4 C14A4.4 P W All gene names: crn-3; C14A4.4; 2K881; CE02145; CE32797; NM_063882; NM_182164; WBGene00000796; WP:CE02145; WP:CE32797 WormBase description: crn-3 encodes a cell death-related nuclease, homologous to the 100 kDa polymyositis/scleroderma autoantigen (PM/Scl-100), that is required for normal levels of DNA degradation during apoptosis; PM/Scl-100 is a ribonuclease component of the multiexonuclease exosome complex, which processes or degrades several types of RNAs in yeast; crn-3(RNAi) animals show retarded growth and a low penetrance of embryonic lethality; CRN-3 promotes both DNA degradation and cell corpse engulfment, in a partially redundant pathway that includes CRN-2 but is parallel to CPS-6; CRN-3 is predicted to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C14A4.8 C14A4.8 P W All gene names: C14A4.8; 2K888; CE02149; WBGene00007559; WP:CE02149
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              list of genes in cluster D, Reinke et al 2004, fem3                                
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C14B1.5 C14B1.5 P W All gene names: C14B1.5; C14B1.5.1; C14B1.5.2; 3E797; CE17401; WBGene00007576; WP:CE17401 WormBase description: C14B1.5 encodes an ortholog of S. cerevisiae YIL103 and human DPH2L1/OVCA1 (OMIM:603527, deleted or downregulated in ovarian tumors); C14B1.5 is paralogous to S. cerevisiae DPH2/YKL191W, a protein component of diphtamide synthesis; C14B1.5 has no obvious function in mass RNAi assays. WormBase CDS description: diptheria toxin resistance protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C14C10.1 C14C10.1 P W All gene names: C14C10.1; 5N69; CE05280; WBGene00007584; WP:CE05280 WormBase description: mitochondrial carrier protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C14C10.4 C14C10.4 P W All gene names: C14C10.4; C14C10.4.1; C14C10.4.2; 5N74; CE05283; WBGene00007587; WP:CE05283
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

C14C11.6 C14C11.6 P W All gene names: mut-14; C14C11.6; 5G140; CE06825; NM_072089; WBGene00003507; WP:CE06825 WormBase description: mut-14 mutants exhibit germline transposon activation, a deficient response to RNAi, resistance to co-suppression, and transgene desilencing. WormBase CDS description: helicase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, list of genes in                            
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C15H11.1 C15H11.1 P W All gene names: C15H11.1; 5O875; CE08178; WBGene00007613; WP:CE08178
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, fem3 enriched genes, Reinke et al 2004,                                
                                              shared sperm                                                                       

C15H11.4 C15H11.4 P W All gene names: dhs-22; C15H11.4; 5O900; CE08181; NM_074169; WBGene00000985; WP:CE08181 WormBase description: dhs-22 encodes a short-chain dehydrogenase predicted to be mitochondrial. WormBase CDS description: dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C15H11.7 pas-1 P W All gene names: pas-1; C15H11.7; C15H11.7.1; C15H11.7.2; 5O902; CE08184; NM_074170; WBGene00003922; WP:CE08184 WormBase description: pas-1 encodes a type 6 alpha subunit of the 26S proteasome's 20S protease core particle (CP); PAS-1 is required for embryonic development and by homology, is predicted to comprise the outer rings of the proteasome and to play a role in selective degradation of ubiquitinated proteins during development; in vitro, PAS-1 interacts with VET-1, a coiled-coil domain-containing protein expressed in the early embryo and ATN-1, an alpha-actinin, in addition to other members of the proteasome. WormBase CDS description: proteasome component (A-type)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

C15H11.8 C15H11.8 P W All gene names: C15H11.8; 5O904; CE08185; WBGene00007616; WP:CE08185 WormBase description: DNA-directed RNA polymerase I like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C15H7.3 C15H7.3 P W All gene names: C15H7.3; 3K740; CE00081; WBGene00007610; WP:CE00081 WormBase description: Protein tyrosine phosphatase (non-receptor class)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C16A11.3 C16A11.3 P W All gene names: C16A11.3; 2E523; CE19353; WBGene00015816; WP:CE19353 WormBase description: protein kinase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, intrinsic,                                  
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C16A11.4 C16A11.4 P W All gene names: C16A11.4; 2E519; CE34688; WBGene00015817; WP:CE34688
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, Reinke et al 2004, IVb male soma                              
                                              enriched genes                                                                     

C16A3.2 C16A3.2 P W All gene names: C16A3.2; 3H479; CE08188; WBGene00015807; WP:CE08188 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, IVb male                                
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C16A3.4 C16A3.4 P W All gene names: C16A3.4; 3H473; CE04004; WBGene00015809; WP:CE04004
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C16A3.7 C16A3.7 P W All gene names: tag-182; C16A3.7; 3H467; CE04007; WBGene00007048; WBGene00015812; WP:CE04007 WormBase description: human NFX1; D. melanogaster shuttle craft protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, intrinsic, Reinke et al 2004, wt vs glp-4                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, Reinke et al 2004, GO categories,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C16C10.1 C16C10.1 P W All gene names: C16C10.1; C16C10.1.1; C16C10.1.2; 3F270; CE33519; WBGene00007622; WP:CE33519 WormBase description: carrier protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C16C10.12 C16C10.12 P W All gene names: C16C10.12; 3F238; CE01492; WBGene00007631; WP:CE01492 WormBase description: ATP binding transport protein (White protein)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes                                                                

C16C2.3 C16C2.3 P W All gene names: ocrl-1; C16C2.3; 1K292; CE17405; NM_060183; WBGene00007620; WP:CE17405 WormBase description: The C16C2.3 gene encodes an inositol-1,4,5-triphosphate 5-phosphatase homolog that is homologous to human OCRL. WormBase CDS description: inositol-1,4,5-triphosphate 5-phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C17E4.5 C17E4.5 P W All gene names: pab-3; C17E4.5; 1J998; CE08254; NM_060103; WBGene00003904; WP:CE08254 WormBase description: pab-3 is orthologous to human PABPN1 (OMIM:602279, mutated in oculopharyngeal muscular dystrophy). WormBase CDS description: RNA binding protein (RNP like)
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig3D Oocyte-en,                                
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C17E4.9 C17E4.9 P W All gene names: C17E4.9; 1K11; CE08258; WBGene00007646; WP:CE08258 WormBase description: sodium/potassium transporting ATPase beta chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              daf-16 Resveratrol                                                                 

C17E7.5 C17E7.5 P W All gene names: nhr-157; C17E7.5; 5E340; CE08265; WBGene00015900; WP:CE08265 WormBase description: nuclear hormone receptor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, Romagnolo et al 2002  Fig3b TF,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C17G1.3 C17G1.3 P W All gene names: ugt-23; C17G1.3; CE08282; WBGene00007650; WP:CE08282; XK542 WormBase description: UDP-glucosyltransferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 Dauer                                
                                              Enriched, Wang et al 2003  S4 genes pass two-wayANOVA                              
                                              P0                                                                                 

C17G1.4 C17G1.4 P W All gene names: C17G1.4; CE08283; CE37318; WBGene00007651; WP:CE08283; WP:CE37318; XK546
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, fem1 enriched                                
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories                                                          

C17G10.1 C17G10.1 P W All gene names: C17G10.1; C17G10.1.1; C17G10.1.2; 2F887; CE01785; WBGene00015915; WP:CE01785
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C17H12.12 C17H12.12 P W All gene names: C17H12.12; 4H563; CE16872; WBGene00015937; WP:CE16872
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C17H12.3 C17H12.3 P W All gene names: C17H12.3; 4H558; CE16864; WBGene00015929; WP:CE16864 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C17H12.4 C17H12.4 P W All gene names: C17H12.4; 4H564; CE16865; WBGene00015930; WP:CE16865 WormBase description: carboxylesterase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C17H12.5 C17H12.5 P W All gene names: C17H12.5; 4H578; CE16866; WBGene00015931; WP:CE16866 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C17H12.9 C17H12.9 P W All gene names: ceh-48; C17H12.9; 4H577; CE16869; WBGene00015934; WP:CE16869 WormBase description: C17H12.9 encodes a ONECUT class CUT homeobox protein with a single N-terminal cut domain; the cut domain may be a compact DNA-binding domain composed of alpha helices; C17H12.9 is strongly affiliated with, and may be orthologous to, Drosophila ONECUT and mammalian HNF6 proteins; C17H12.9 has no obvious function in mass RNAi assays. WormBase CDS description: homeobox protein
                                              
Member of lists (Publications lists):
                                              Portman et al 2004  T1 newly found                                
                                              ray-genes in25c, Portman et al 2004  T1 25 candidate                               
                                              ray genes, Reinke et al 2004, mixed sperm soma, Reinke                             
                                              et al 2004, GO categories, Reinke et al 2004, fem3                                 
                                              enriched genes                                                                     

C18A3.1 C18A3.1 P W All gene names: C18A3.1; 2G11; CE01793; WBGene00015939; WP:CE01793
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C18B10.7 str-190 P W All gene names: str-190; C18B10.7; 5H958; CE25782; NM_072522; WBGene00006231; WP:CE25782 WormBase description: 7TM chemoreceptor, str family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes                                                                              

C18G1.5 C18G1.5 P W All gene names: hil-4; C18G1.5; C18G1.5.1; C18G1.5.2; H1.4; 5F233; CE17421; NM_071876; WBGene00001855; WP:CE17421 WormBase description: histone H1
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C18H2.4 C18H2.4 P W All gene names: C18H2.4; 3I789; CE00762; WBGene00015991; WP:CE00762 WormBase description: C18H2.4 is orthologous to the human gene GLOMULIN (FAP48; OMIM:601749), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, herm sperm, Reinke et al                                
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes, Reinke et al 2004, wt vs                                
                                              glp-4 enriched genes, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S8 SAGE genes in the dauer exit, Wang et al                               
                                              2003  S7 SAGE genes in the dataset                                                 

C23H3.4 C23H3.4 P W All gene names: sptl-1; C23H3.4; C23H3.4a.1; C23H3.4a.2; C23H3.4a.3; C23H3.4b.1; C23H3.4b.2; 2A347; CE08323; CE37749; WBGene00016020; WP:CE08323; WP:CE37749 WormBase description: C23H3.4 encodes a putative serine palmitoyltransferase required for normal embryonic and larval developement, locomotion, and speed of growth.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, herm                              
                                              soma enriched genes, Reinke et al 2004, GO categories,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C23H4.3 C23H4.3 P W All gene names: C23H4.3; CE31418; WBGene00007692; WP:CE31418; XM847 WormBase description: carboxyesterase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

C24D10.1 C24D10.1 P W All gene names: C24D10.1; 4F931; CE34705; WBGene00016053; WP:CE34705
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C24F3.2 C24F3.2 P W All gene names: C24F3.2; 4K987; CE18519; WBGene00007697; WP:CE18519 WormBase description: Dual specificity phosphatase, catalytic domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C24F3.4 C24F3.4 P W All gene names: C24F3.4; 4K980; CE18521; WBGene00007698; WP:CE18521
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C24F3.5 C24F3.5 P W All gene names: abt-1; C24F3.5; 4K970; CE19700; NM_069464; WBGene00000019; WP:CE19700 WormBase description: abt-1 encodes a predicted ATP-binding cassette (ABC) transporter that is a member of the ABCA subfamily of transport proteins; ABT-1 is predicted to function as a transmembrane protein that couples energy to transport of various molecules across membranes, but as loss of abt-1 activity via RNAi results in no obvious defects, the precise role of abt-1 in C. elegans development and/or behavior is not yet known. WormBase CDS description: ABC transporters
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C24H11.1 C24H11.1 P W All gene names: C24H11.1; 3M879; CE18524; WBGene00007699; WP:CE18524 WormBase description: Protein phosphatase-1 (PP1)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C24H11.2 C24H11.2 P W All gene names: C24H11.2; 3M880; CE18525; WBGene00007700; WP:CE18525 WormBase description: Protein phosphatase-1 (PP1)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt herm enriched gen, Reinke et al                             
                                              2004, fem3 enriched genes, Reinke et al 2004, wt males                             
                                              vs glp4 male enriched , Reinke et al 2004, mixed sperm                             
                                              soma, Reinke et al 2004, list of genes in cluster D,                               
                                              Reinke et al 2004, GO categories                                                   

C24H11.3 C24H11.3 P W All gene names: tbx-38; C24H11.3; 3M874; CE18526; NM_067125; WBGene00006557; WP:CE18526 WormBase description: T-box
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories                                                          

C25A1.12 C25A1.12 P W All gene names: C25A1.12; 1K768; CE08378; WBGene00007711; WP:CE08378
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C25A1.3 C25A1.3 P W All gene names: tag-72; C25A1.3; 1K736; CE36918; WBGene00006447; WP:CE36918 WormBase description: Yeast ABD1 protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, Fig2b shared gemlines,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, GO categories,                             
                                              Romagnolo et al 2002  Fig3b Protein Synthesis,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25A1.4 C25A1.4 P W All gene names: C25A1.4; C25A1.4.1; C25A1.4.2; 1K746; CE08369; WBGene00007706; WP:CE08369 WormBase description: RNA binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C25A1.5 C25A1.5 P W All gene names: C25A1.5; 1K755; CE08370; WBGene00007707; WP:CE08370 WormBase description: Yeast hypothetical 44.9 KD protein like
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C25A1.9 C25A1.9 P W All gene names: C25A1.9; 1K763; CE18532; WBGene00007710; WP:CE18532
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25A8.5 C25A8.5 P W All gene names: C25A8.5; 4H765; CE08385; WBGene00016085; WP:CE08385 WormBase description: protein-tyrosine kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25D7.1 C25D7.1 P W All gene names: C25D7.1; 5P516; CE08387; WBGene00007714; WP:CE08387
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, Reinke et al 2004, list of genes in                                   
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25D7.12 C25D7.12 P W All gene names: C25D7.12; 5P513; CE08397; WBGene00007721; WP:CE08397
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C25D7.2 C25D7.2 P W All gene names: C25D7.2; 5P518; CE08388; WBGene00007715; WP:CE08388
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt males vs glp4 male enriched , Reinke et al                             
                                              2004, mixed sperm soma, Reinke et al 2004, GO                                      
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, fem3 enriched genes                                          

C25D7.3 sdc-3 P W All gene names: dpy-29; sdc-3; C25D7.3; 5P520; CE08389; NM_074302; WBGene00004747; WP:CE08389 WormBase description: sdc-3 encodes a protein that contains two mutationally separable domains: a zinc finger motif required for dosage compensation and a myosin- like putative ATP- binding region required for her-1 regulation of sex determination; SDC-3 activates dosage compensation by directing the dosage compensation protein complex to the hermaphrodite X chromosomes, and is functionally redundant with SDC-2 with respect to dosage compensation; SDC-1, SDC-2, and SDC-3 proteins form a complex. WormBase CDS description: Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, mixed oogenesis soma                                                         

C25G4.4 C25G4.4 P W All gene names: tag-347; C25G4.4; 4N218; CE05305; WBGene00007732; WP:CE05305 WormBase description: SAND domain
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              TF, Reinke et al 2004, spermatogenesis enriched genes,                             
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, GO                                
                                              categories, Reinke et al 2004, shared sperm,                                       
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25G4.5 dpy-26 P W All gene names: dpy-26; C25G4.5; 4N212; CE08398; NM_069977; WBGene00001085; WP:CE08398 WormBase description: SDC-1, SDC-2, and SDC-3 proteins form a complex (detectable by coimmunoprecipitation); these three proteins, in turn, colocalize with DPY-26, DPY-27, and MIX-1 proteins both on a transgenic her-1(+) array and on the X chromosome.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen                                                       

C25H3.1 C25H3.1 P W All gene names: C25H3.1; 2F991; CE37321; WBGene00016111; WP:CE37321
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, Wang et al 2003  S6 removed genes                             
                                              of contamination                                                                   

C26B9.5 C26B9.5 P W All gene names: C26B9.5; CE04098; WBGene00016134; WP:CE04098; XF949 WormBase description: lysosomal Pro-X carboxypeptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, Wang et al 2003  S4                             
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

C26C6.1 C26C6.1 P W All gene names: tag-185; C26C6.1; C26C6.1b.1; C26C6.1b.2; C26C6.1b.3; 1I79; CE30254; CE38280; WBGene00007042; WBGene00007738; WP:CE30254; WP:CE38280 WormBase description: HMG (high mobility group) box, Bromodomain (5 domains), Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C26C6.2 goa-1 P W All gene names: goa-1; C26C6.2; 1I101; CE05311; NM_059707; WBGene00001648; WP:CE05311 WormBase description: The goa-1 gene encodes an ortholog of the heterotrimeric G protein alpha subunit Go (Go/Gi class) that affects normal locomotion, egg-laying, and male mating; it genetically interacts with the egl-30 pathway, and is expressed in all neurons and sex-specific muscles. WormBase CDS description: guanine nucleotide-binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C26D10.2 hel-1 P W All gene names: hel-1; C26D10.2; C26D10.2b.1; C26D10.2b.2; 2I618; CE03025; CE32593; WBGene00001840; WP:CE03025; WP:CE32593; hel WormBase description: translation initiation factor eIF-4A
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C26E1.2 C26E1.2 P W All gene names: C26E1.2; 5N789; CE36581; WBGene00007748; WP:CE36581
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 TransientList, Wang et al 2003  S3  genes                              
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C26H9A.1 vha-7 P W All gene names: vha-7; C26H9A.1; C26H9A.B; 4N413; CE30882; NM_070018; WBGene00006916; WP:CE30882
                                              
Member of lists (Publications lists):
                                              McElwee et al 2003  T1 targets of                                 
                                              daf-16, Reinke et al 2004, list of genes in cluster F,                             
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, mixed oogenesis soma                                                         

C27A12.2 C27A12.2 P W All gene names: C27A12.2; 1G621; CE08411; WBGene00016154; WP:CE08411 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Reinke et al 2004, fem1                                 
                                              enriched genes, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, oogenesis enriched                               
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              list of genes in cluster E, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated                                                                  

C27B7.4 C27B7.4 P W All gene names: C27B7.4; 4J665; CE17477; WBGene00007761; WP:CE17477 WormBase description: DNA repair protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, intrinsic, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol                                                                        

C27B7.5 C27B7.5 P W All gene names: C27B7.5; 4J667; CE03034; WBGene00007762; WP:CE03034 WormBase description: Zinc finger, CCHC class
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Jones et al 2001  Non dauer                             
                                              genes P<0.05, Reinke et al 2004, list of genes in                                  
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              Romagnolo et al 2002  Fig3b TF, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

C27B7.8 rrp-1 P W All gene names: rap-1; rrp-1; C27B7.8; 4J682; CE03037; NM_069148; WBGene00004307; WP:CE03037 WormBase description: rap-1 encodes a member of the Ras superfamily of small GTPases; the activated protein interacts with W05B10.4 and T14G10.2 in yeast two-hybrid assays and rap-1 is expressed in some neurons in the head and tail, the rectal epithelial cells, body muscle, hypodermis, and in the somatic cells of the gonad. WormBase CDS description: ras protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C27C12.5 C27C12.5 P W All gene names: tag-324; C27C12.5; CE31421; WBGene00007775; WP:CE31421; XP471
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C27C12.7 C27C12.7 P W All gene names: dpf-2; C27C12.7; CE05324; NM_078060; WBGene00001055; WP:CE05324; XP455 WormBase description: dipeptidyl aminopeptidase like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, ViswanathanM et al 2005  S2                              
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, Wang et al 2003  S4 TransientList, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit, Wang et al 2003  S7                               
                                              SAGE genes in the dataset, Wang et al 2003  S4 genes                               
                                              pass two-wayANOVA P0                                                               

C27D8.1 C27D8.1 P W All gene names: C27D8.1; 4N483; CE18539; WBGene00007777; WP:CE18539 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004,                                
                                              list of genes in cluster D, Reinke et al 2004, GO                                  
                                              categories, Reinke et al 2004, shared sperm                                        

C27F2.6 C27F2.6 P W All gene names: C27F2.6; 3G70; CE01173; WBGene00016168; WP:CE01173
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, spermatogenesis                                
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, shared                                  
                                              sperm, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C27H5.6 C27H5.6 P W All gene names: C27H5.6; 2H474; CE34715; WBGene00016175; WP:CE34715
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, GO categories, Reinke et al 2004, IVb male                             
                                              soma enriched genes                                                                

C28A5.3 nex-3 P W All gene names: nex-3; C28A5.3; 3F533; CE00661; NM_065502; WBGene00003590; WP:CE00661 WormBase description: nex-3 encodes an annexin, a member of a family of calcium-dependent phospholipid binding proteins; by homology, NEX-3 could function in a number of processes, such as membrane fusion, cytoskeletal interactions, and intracellular signaling; however, as loss of nex-3 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of NEX-3 in C. elegans development and/or behavior is not yet known. WormBase CDS description: Annexin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated                                                      

C28A5.4 ceh-43 P W All gene names: ceh-43; C28A5.4; 3F536; CE05325; NM_065503; WBGene00000463; WP:CE05325 WormBase description: A homeobox protein of the Distal-less (Dll) class that is required for development of the anterior hypdermis during embryonic morphogenesis for cell adhesion; also affects embryonic and larval viability; it is predominantly expressed in the head hypdodermis, neuronal support cells and CAN neurons. WormBase CDS description: homeobox protein (distal-less subfamily)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Portman et al 2004  T1 25                                    
                                              candidate ray genes, Reinke et al 2004, fem1 enriched                              
                                              genes, Reinke et al 2004, mixed oogenesis soma                                     

C28A5.6 C28A5.6 P W All gene names: C28A5.6; 3F514; CE00673; WBGene00007791; WP:CE00673 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C28D4.3 C28D4.3 P W All gene names: gln-6; C28D4.3; C28D4.3.1; C28D4.3.2; 4K504; CE08432; NM_069332; WBGene00001607; WP:CE08432 WormBase description: glutamine synthase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S6 removed genes of contamination                                         

C29E6.3 C29E6.3 P W All gene names: pph-2; pph2A-c; C29E6.3; 4M640; CE17478; NM_069850; WBGene00004084; WP:CE17478 WormBase description: protein tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C29E6.5 nhr-43 P W All gene names: nhr-43; C29E6.5; 4M667; CE05336; NM_069853; WBGene00003633; WP:CE05336 WormBase description: nhr-43 is predicted to encode a nuclear hormone receptor (NHR); the primary sequence of nhr-43 reveals that it has a leucine instead of a methionine that is conserved within the NHR superfamily at the carboxyl boundary of the DNA-binding domain. WormBase CDS description: Zinc finger, C4 type (two domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes                                             

C29F4.2 C29F4.2 P W All gene names: C29F4.2; 4L992; CE03039; WBGene00007808; WP:CE03039 WormBase description: Putative membrane protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes                                               

C29F5.3 C29F5.3 P W All gene names: C29F5.3; 2G580; CE02510; WBGene00016212; WP:CE02510
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S6 removed genes of contamination                                         

C29F5.6 C29F5.6 P W All gene names: C29F5.6; 2G590; WBGene00016214
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C29F7.4 C29F7.4 P W All gene names: fkh-3; C29F7.4; CE08445; NM_077836; WBGene00001435; WP:CE08445; XO40 WormBase description: fork head domain protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C29F7.5 C29F7.5 P W All gene names: fkh-4; tag-39; C29F7.5; CE08446; NM_077837; WBGene00001436; WP:CE08446; XO46 WormBase description: fkh-4 encodes a member of the forkhead domain transcription factor family. WormBase CDS description: fork head domain protein
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Reinke et al 2004, fem1                                 
                                              enriched genes, Reinke et al 2004, mixed oogenesis                                 
                                              soma, Reinke et al 2004, GO categories, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

C29H12.1 rrt-2 P W All gene names: rrt-2; C29H12.1; 2G417; CE17479; NM_062826; WBGene00004680; WP:CE17479 WormBase description: arginyl-tRNA synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C29H12.5 C29H12.5 P W All gene names: C29H12.5; 2G400; CE02518; WBGene00016236; WP:CE02518
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C30B5.3 cpb-2 P W All gene names: cpb-2; C30B5.3; 2G485; CE34717; NM_062835; WBGene00000771; WP:CE34717 WormBase description: The cbp-2 gene encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog, expressed specifically in the spermatogenic germ line. WormBase CDS description: C. elegans protein C40H1.1
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, wt males vs glp4 male                            
                                              enriched , Reinke et al 2004, spermatogenesis enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster D,                              
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, shared sperm, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C30B5.4 C30B5.4 P W All gene names: C30B5.4; 2G486; CE02523; WBGene00016245; WP:CE02523 WormBase description: Probable RNA binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C30B5.5 C30B5.5 P W All gene names: C30B5.5; 2G490; CE02524; WBGene00016246; WP:CE02524
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C30G12.2 C30G12.2 P W All gene names: C30G12.2; 2H581; CE25799; WBGene00016274; WP:CE25799 WormBase description: Alcohol dehydrogenase
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, fem1 enriched genes,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, list of genes in cluster C, Reinke et al 2004, GO                            
                                              categories, Reinke et al 2004, herm soma enriched                                  
                                              genes, Wang et al 2003  S4 TransientList, Wang et al                               
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C31H1.2 C31H1.2 P W All gene names: C31H1.2; 4G555; CE39001; WBGene00016287; WP:CE39001
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, fem3 enriched                              
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C31H1.5 C31H1.5 P W All gene names: C31H1.5; 4G558; CE34723; WBGene00016288; WP:CE34723
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C32B5.2 C32B5.2 P W All gene names: srh-274; C32B5.2; 2B269; CE08510; NM_061473; WBGene00005479; WP:CE08510 WormBase description: 7TM chemoreceptor, srh family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, ViswanathanM et al 2005  S2 daf-16                            
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C32D5.8 C32D5.8 P W All gene names: C32D5.8; C32D5.8a.1; C32D5.8a.2; 2G632; CE01848; CE37326; WBGene00016316; WP:CE01848; WP:CE37326 WormBase description: Thioredoxin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C32E8.5 C32E8.5 P W All gene names: C32E8.5; 1E351; CE08529; WBGene00016323; WP:CE08529
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 daf-16                             
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C32E8.8 ptr-2 P W All gene names: ptr-2; C32E8.8; 1E358; CE08532; NM_058820; WBGene00004217; WP:CE08532
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, PAL-1 target genes,                             
                                              Jones et al 2001  Non dauer genes P<0.05, Reinke et al                             
                                              2004, list of genes in cluster F, Reinke et al 2004,                               
                                              fem1 enriched genes, Reinke et al 2004, list of genes                              
                                              in cluster order, Reinke et al 2004, oogenesis enriched                            
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C32F10.5 hmg-3 P W All gene names: hmg-3; C32F10.5; 1G392; CE08542; NM_059287; WBGene00001973; WP:CE08542 WormBase description: single-strand recognition protein
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, PAL-1 target genes,                             
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes, Reinke et al 2004, wt herm vs                            
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C33A12.15 C33A12.15 P W All gene names: C33A12.15; 4K268; CE35419; WBGene00007888; WP:CE35419 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C33A12.6 C33A12.6 P W All gene names: ugt-21; C33A12.6; 4K263; CE05352; WBGene00007885; WP:CE05352 WormBase description: UDP-glucuronysltransferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, GO categories, Reinke                            
                                              et al 2004, herm soma enriched genes, Reinke et al                                 
                                              2004, list of genes in cluster B, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C33F10.12 C33F10.12 P W All gene names: C33F10.12; 2F126; CE04144; WBGene00016358; WP:CE04144 WormBase description: mitochondrial phosphate carrier protei
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C33F10.2 C33F10.2 P W All gene names: C33F10.2; 2F123; CE02529; WBGene00016352; WP:CE02529 WormBase description: Cell division control protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C33F10.9 msp-40 P W All gene names: msp-40; C33F10.9; 2F115; NM_062464; WBGene00003435 WormBase description: msp-40 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm                                                                       

C33H5.16 C33H5.16 P W All gene names: C33H5.16; 4I566; CE04159; WBGene00016382; WP:CE04159 WormBase description: protein-tyrosine phophatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C33H5.17 C33H5.17 P W All gene names: C33H5.17; 4I576; CE04160; WBGene00016383; WP:CE04160
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C33H5.4 klp-10 P W All gene names: klp-10; C33H5.4; 4I565; CE04148; CE34733; WBGene00002221; WP:CE04148; WP:CE34733 WormBase description: klp-10 encodes a predicted kinesin motor protein that while similar to the Xenopus and human klp2 kinesins, lacks the switch I motif critical for interaction with ATP; although RNAi experiments purportedly targeting klp-10 result in meiotic defects and embryonic lethality, loss of klp-10 activity via a deletion allele results in no obvious abnormalities, suggesting that the reported RNAi phenotypes are due to targeting of the highly similar klp-18 gene; klp-10 expression levels appear to be below the level of detection of RT-PCR, Northern, and Western analyses.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster F,                             
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S8 SAGE genes in                               
                                              the dauer exit, Wang et al 2003  S7 SAGE genes in the                              
                                              dataset                                                                            

C34B2.3 C34B2.3 P W All gene names: C34B2.3; 1L251; CE34266; WBGene00016388; WP:CE34266 WormBase description: protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C34C6.4 C34C6.4 P W All gene names: C34C6.4; 2I988; CE03052; WBGene00007917; WP:CE03052 WormBase description: choline dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, mixed sperm                               
                                              soma, Reinke et al 2004, GO categories, Reinke et al                               
                                              2004, herm soma enriched genes, Reinke et al 2004, fem3                            
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, ViswanathanM et al 2005 S2 Resveratrol                                
                                              regulate WT                                                                        

C34C6.5 C34C6.5 P W All gene names: tag-274; C34C6.5; C34C6.5b.1; C34C6.5b.2; C34C6.5b.3; 2I990; CE03053; CE35833; WBGene00007918; WP:CE03053; WP:CE35833 WormBase description: Diacylglycerol kinase catalytic domain (presumed)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, GO categories, Reinke et al                            
                                              2004, herm soma enriched genes, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

C34D4.3 C34D4.3 P W All gene names: C34D4.3; 4H919; CE06924; WBGene00016399; WP:CE06924
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C34D4.8 str-48 P W All gene names: str-48; C34D4.8; 4H885; CE24826; NM_068715; WBGene00006113; WP:CE24826 WormBase description: 7TM chemoreceptor, str family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes                                             

C34F11.4 msp-50 P W All gene names: msp-50; C34F11.4; 2F491; NM_062571; WBGene00003443 WormBase description: msp-50 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C34F11.5 C34F11.5 P W All gene names: C34F11.5; 2F489; CE04165; WBGene00016416; WP:CE04165 WormBase description: tyrosine-protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C34F11.6 msp-49 P W All gene names: msp-49; C34F11.6; 2F485; CE04166; NM_062569; WBGene00003442; WP:CE04166 WormBase description: msp-49 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C35A5.2 C35A5.2 P W All gene names: ugt-33; C35A5.2; 5K975; CE31329; WBGene00007946; WP:CE31329 WormBase description: UDP-glucuronosyltransferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, fem3 enriched genes,                             
                                              Reinke et al 2004, list of genes in cluster C, Reinke                              
                                              et al 2004, mixed sperm soma, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

C35C5.1 sdc-2 P W All gene names: sdc-2; C35C5.1; CE18542; NM_077523; WBGene00004746; WP:CE18542; XM151 WormBase description: The sdc-2 gene encodes a protein that represses transcription of X chromosomes to achieve dosage compensation, and that also represses the male sex-determination gene her-1 to elicit hermaphrodite differentiation.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma                                     

C35D10.10 C35D10.10 P W All gene names: C35D10.10; 3F950; CE01191; WBGene00016446; WP:CE01191
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C35D10.11 C35D10.11 P W All gene names: C35D10.11; 3F958; WBGene00016447
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, shared sperm, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C35E7.9 C35E7.9 P W All gene names: C35E7.9; 1L383; CE17522; WBGene00016461; WP:CE17522
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C36A4.1 C36A4.1 P W All gene names: cyp-25A1; C36A4.1; 3E921; CE37711; NM_065374; WBGene00007963; WP:CE37711 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Menzel et al 2001  T3 CYP genes, ReichertK et                            
                                              al 2005  T3 xenobiotic downregulated, Reinke et al                                 
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, herm soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

C36A4.2 C36A4.2 P W All gene names: cyp-25A2; C36A4.2; 3E925; CE37617; NM_065375; WBGene00007964; WP:CE37617 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 Cytochrome                                
                                              P450, McCarroll et al 2004  SFig1-4 conserved w/                                   
                                              Drosoph, Menzel et al 2001  T3 CYP genes, Reinke et al                             
                                              2004, herm soma enriched genes, Reinke et al 2004, GO                              
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C36B1.10 C36B1.10 P W All gene names: C36B1.10; 1J326; CE05377; WBGene00007977; WP:CE05377 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, shared sperm, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C36B1.3 C36B1.3 P W All gene names: C36B1.3; 1J307; CE39091; WBGene00007971; WP:CE39091 WormBase description: DNA directed RNA polymerase II
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes, Reinke et al 2004, wt vs                                 
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C36B1.4 pas-4 P W All gene names: pas-4; C36B1.4; C36B1.4.1; C36B1.4.2; C36B1.4.3; 1J304; CE05371; NM_059959; WBGene00003925; WP:CE05371 WormBase description: proteasome A-type submit
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , McCarroll et al 2004  SFig5                                   
                                              conserved w/ yeast, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C36B1.7 C36B1.7 P W All gene names: C36B1.7; 1J313; CE05374; WBGene00007974; WP:CE05374 WormBase description: di-hydrofolate reductase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C36B1.9 C36B1.9 P W All gene names: C36B1.9; 1J318; CE05376; WBGene00007976; WP:CE05376 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              daf-16 Resveratrol                                                                 

C36H8.1 C36H8.1 P W All gene names: C36H8.1; 4N508; CE05380; WBGene00007987; WP:CE05380 WormBase description: major sperm protein like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, shared sperm, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

C37A2.3 C37A2.3 P W All gene names: C37A2.3; 1H361; CE08612; WBGene00016491; WP:CE08612 WormBase description: acyl-CoA dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster D, Reinke et al 2004, fem3 enriched genes                               

C37C3.1 C37C3.1 P W All gene names: C37C3.1; 5I339; CE06926; WBGene00016495; WP:CE06926
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E                                                                       

C38C10.4 ags-3.3 P W All gene names: ags-3.3; gpr-2; C38C10.4; 3K482; CE00107; NM_066665; WBGene00001689; WP:CE00107 WormBase description: gpr-2 encodes a protein containing a GPR (G Protein Regulator)/GoLoco motif characteristic of guanine nucleotide exchange factors specific for G-alpha GTPases; GPR-2 appears to function redundantly during early embryogenesis and germ-line development to regulate chromosome and spindle movements during cell division; GPR-2 likely acts as a positive regulator of G protein signaling and specifically, may regulate GOA-1 signaling in the embryo; GPR-2 forms a protein complex with the nearly identical GPR-1 and with LIN-5, a coiled-coil protein that is required for proper localization of GPR-2 to the cell cortex and spindle asters of the early embryo; in addition, proper GPR-2/GPR-1/LIN-5 localization between the P2 and EMS blastomeres at the four-cell stage, which may contribute to spindle positioning in EMS, requires the MES-1/SRC-1 tyrosine kinase signaling pathway; GPR-2 is believed to act downstream of, or in parallel to, PAR-3, a PDZ domain-containing protein, in mitotic spindle positioning in the early embryo.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C38D4.3 C38D4.3 P W All gene names: C38D4.3; 3F881; CE36378; WBGene00008004; WP:CE36378
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, intrinsic,                                  
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2 daf-16                            
                                              Resveratrol                                                                        

C38D4.7 C38D4.7 P W All gene names: C38D4.7; 3F898; CE00920; WBGene00008007; WP:CE00920
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C39D10.2 C39D10.2 P W All gene names: C39D10.2; CE04181; WBGene00016530; WP:CE04181; XI509
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, wt herm vs wt herm enriched                             
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              Reinke et al 2004, GO categories, Wang et al 2003  S3                              
                                              genes pass one-way ANOVA, Wang et al 2003  S8 SAGE                                 
                                              genes in the dauer exit, Wang et al 2003  S7 SAGE genes                            
                                              in the dataset, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

C39E9.12 C39E9.12 P W All gene names: C39E9.12; 4N859; CE39690; WBGene00008035; WP:CE39690
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster F,                             
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, Fig2b shared gemlines, Reinke et al 2004, list of                            
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt males vs glp4 male                                    
                                              enriched , Reinke et al 2004, wt herm vs wt male                                   
                                              enriched gen, Reinke et al 2004, GO categories,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C39E9.13 rfc-3 P W All gene names: rfc-3; C39E9.13; 4N861; CE05396; NM_070116; WBGene00004339; WP:CE05396 WormBase description: Human activator 1 38 KD subunit like
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, intrinsic, Reinke et al 2004, wt vs glp-4                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C39H7.1 C39H7.1 P W All gene names: C39H7.1; 4G397; CE06942; WBGene00016541; WP:CE06942 WormBase description: casein kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, shared sperm, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C40H1.1 cpb-1 P W All gene names: cpb-1; C40H1.1; 3K413; CE00109; NM_066650; WBGene00000770; WP:CE00109 WormBase description: The cbp-1 gene encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog involved in two steps of spermatogenesis. WormBase CDS description: Ovarian protein (fly)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol                                                                 

C40H1.2 C40H1.2 P W All gene names: C40H1.2; 3K409; CE00110; WBGene00008038; WP:CE00110
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated                                                      

C41D11.7 C41D11.7 P W All gene names: C41D11.7; 1F20; CE36108; WBGene00016566; WP:CE36108 WormBase description: DNA-binding protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C41G6.11 C41G6.11 P W All gene names: sri-24; C41G6.11; 5P693; CE23587; NM_074357; WBGene00005536; WP:CE23587 WormBase description: 7TM chemoreceptor, sri family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C41G6.12 C41G6.12 P W All gene names: C41G6.12; 5P686; CE15709; WBGene00008058; WP:CE15709
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C42C1.4 C42C1.4 P W All gene names: C42C1.4; 4N36; CE16910; CE36276; WBGene00016582; WP:CE16910; WP:CE36276
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, McCarroll et al 2004  SFig1-4 conserved w/                                  
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, mixed oogenesis soma, Reinke et al 2004, GO                               
                                              categories                                                                         

C42D4.8 rpc-1 P W All gene names: rpc-1; rpo-1; C42D4.8; 4H926; CE31330; NM_068726; WBGene00004411; WP:CE31330 WormBase description: DNA-directed RNA polymerase II largest subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 daf-16 Resveratrol                                                     

C43E11.1 C43E11.1 P W All gene names: cogc-5; C43E11.1; C43E11.1.1; C43E11.1.2; 1E841; CE23592; WBGene00016601; WP:CE23592
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C43E11.10 C43E11.10 P W All gene names: cdc-6; C43E11.10; 1E838; CE08688; NM_058942; WBGene00000382; WP:CE08688 WormBase description: cdc-6 encodes a homolog of an origin complex component (CDC6) which in yeast controls the start of DNA replication, and also has a distant paralog (Y39A1A.12) within the C. elegans genome; CDC-6 is superficially dispensable for embryonic viability, perhaps because of redundancy with Y39A1A.12.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C43E11.4 C43E11.4 P W All gene names: EF-Tu2; tufm-2; C43E11.4; 1E817; CE32610; WBGene00007001; WBGene00016604; WP:CE32610 WormBase description: elongation factor Tu
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              daf-16 Resveratrol, Wang et al 2003  S5 genes common to                            
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C43E11.5 C43E11.5 P W All gene names: C43E11.5; 1E807; CE08683; WBGene00016605; WP:CE08683
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C43F9.6 C43F9.6 P W All gene names: C43F9.6; 4L357; CE19734; WBGene00008074; WP:CE19734 WormBase description: Sodium and potassium ATPases
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C43G2.4 C43G2.4 P W All gene names: C43G2.4; CE34750; NM_068599; WBGene00016613; WP:CE34750
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes                                                                

C44B12.2 ost-1 P W All gene names: ost-1; C44B12.2; 4B863; CE08703; NM_067638; SPARC; SPARC/1; WBGene00003893; WP:CE08703 WormBase description: osteonectin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, mixed sperm soma, Reinke                             
                                              et al 2004, fem3 enriched genes, Roy et al 2002  S2                                
                                              positivecontrol L1 muscle, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

C44B7.10 C44B7.10 P W All gene names: C44B7.10; C44B7.10.1; C44B7.10.2; C44B7.10.3; C44B7.10.4; 2H180; CE32326; WBGene00016630; WP:CE32326
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C44B7.11 C44B7.11 P W All gene names: C44B7.11; 2H184; CE39335; WBGene00016631; WP:CE39335
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, ViswanathanM et al                              
                                              2005  S2 daf-16 Resveratrol, Wang et al 2003  S5 genes                             
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

C44B9.2 C44B9.2 P W All gene names: C44B9.2; 3L965; CE05404; WBGene00008079; WP:CE05404
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C44B9.4 C44B9.4 P W All gene names: athp-1; C44B9.4; 3L981; CE30897; WBGene00008081; WP:CE30897 WormBase description: S.pombe hypothetical protein C27F7.07C like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              GO categories, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C44E4.4 C44E4.4 P W All gene names: C44E4.4; C44E4.4.1; C44E4.4.2; 1F203; CE08718; WBGene00016653; WP:CE08718 WormBase description: RNA-binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C45G9.1 C45G9.1 P W All gene names: C45G9.1; 3G165; CE24851; WBGene00016673; WP:CE24851 WormBase description: Protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, fem3 enriched genes                                 

C46A5.1 C46A5.1 P W All gene names: C46A5.1; 4I529; CE08751; WBGene00016698; WP:CE08751 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, GO categories,                                  
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, shared sperm                                                                 

C46F11.2 C46F11.2 P W All gene names: C46F11.2; C46F11.2b.1; C46F11.2b.2; 3E741; CE08773; CE17558; WBGene00008117; WP:CE08773; WP:CE17558 WormBase description: C46F11.2 is orthologous to human MITOCHONDRIAL GLUTATHIONE REDUCTASE (GSR; OMIM:138300); GSR deficiency has been associated with hemolytic anemia.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

C47A4.3 C47A4.3 P W All gene names: C47A4.3; 4O506; CE19739; WBGene00008124; WP:CE19739 WormBase description: Ser/Thr protein phosphatase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, shared sperm, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol                                                        

C47B2.4 pbs-2 P W All gene names: pbs-2; C47B2.4; 1N560; CE17564; NM_060870; WBGene00003948; WP:CE17564 WormBase description: Proteasome A-type and B-type
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C47B2.5 C47B2.5 P W All gene names: eif-6; C47B2.5; C47B2.5.1; C47B2.5.2; 1N561; CE17565; NM_060871; WBGene00001234; WP:CE17565 WormBase description: EUKARYOTIC TRANSLATION INITIATION FACTOR 6 (EIF-6)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, GO                              
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C47C12.4 C47C12.4 P W All gene names: C47C12.4; CE08797; WBGene00016737; WP:CE08797; XI366 WormBase description: ATP/GTP-binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C47E12.2 C47E12.2 P W All gene names: C47E12.2; C47E12.2.1; C47E12.2.2; 4K766; CE05446; WBGene00008147; WP:CE05446 WormBase description: ADP/ATP carrier protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Lund et al 2002   Fig3C Germline-intrinsic,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C47E12.5 C47E12.5 P W All gene names: uba-1; C47E12.5; C47E12.5a.1; C47E12.5a.2; C47E12.5a.3; C47E12.5b.1; C47E12.5b.2; C47E12.5b.3; C47E12.5b.4; C47E12.5b.5; 4K754; CE05449; CE39093; NM_069399; WBGene00006699; WP:CE05449; WP:CE39093 WormBase description: uba-1 encodes a ubiquitin-activating enzyme orthologous to Saccharomyces cerevisiae UBA1 and human UBE1; UBA-1 is essential for embryogenesis and is required for germline development; by homology, UBA-1 is predicted to function in an ATP-dependent reaction that activates ubiquitin prior to its conjugation to proteins that will subsequently be degraded by the 26S proteasome; a uba-1 transcriptional reporter fusion is expressed in the larval intestine.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C48A7.2 C48A7.2 P W All gene names: C48A7.2; T12B3.F; 4I161; CE20573; WBGene00016739; WP:CE20573 WormBase description: phosphate permease
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, IVb male soma                              
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

C48B4.1 C48B4.1 P W All gene names: C48B4.1; C48B4.1.1; C48B4.1.2; 3K676; CE00491; WBGene00008167; WP:CE00491 WormBase description: Acyl-CoA oxidase I
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt male                                   
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated                                                      

C48B6.2 C48B6.2 P W All gene names: C48B6.2; C48B6.2.1; C48B6.2.2; 1H493; CE08804; WBGene00016740; WP:CE08804 WormBase description: ribosomal protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C48B6.4 C48B6.4 P W All gene names: C48B6.4; 1H465; CE08806; WBGene00016742; WP:CE08806
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

C48E7.9 C48E7.9 P W All gene names: twk-37; C48E7.9; 1G844; CE08824; NM_059409; WBGene00006689; WP:CE08824
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, fem3 enriched genes                                 

C49A1.2 C49A1.2 P W All gene names: C49A1.2; 1O798; CE15721; WBGene00008185; WP:CE15721 WormBase description: Putative membrane protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes                                                                

C49C3.11 C49C3.11 P W All gene names: C49C3.11; 4S289; CE19750; WBGene00008201; WP:CE19750
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C49C3.2 C49C3.2 P W All gene names: C49C3.2; 4S259; CE36280; WBGene00008192; WP:CE36280 WormBase description: serine/threonine kinase (2 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C49C8.1 C49C8.1 P W All gene names: C49C8.1; 4J421; CE08836; WBGene00016765; WP:CE08836 WormBase description: serine/threonine-protein kinase
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta induced,                                
                                              Reinke et al 2004, spermatogenesis enriched genes,                                 
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, GO                                
                                              categories, Reinke et al 2004, shared sperm                                        

C49C8.6 C49C8.6 P W All gene names: C49C8.6; 4J422; CE35963; WBGene00016770; WP:CE35963
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C50B6.7 C50B6.7 P W All gene names: C50B6.7; 5N804; CE08876; WBGene00008220; WP:CE08876 WormBase description: amylase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, GO categories,                                
                                              Reinke et al 2004, herm soma enriched genes, Reinke et                             
                                              al 2004, list of genes in cluster B, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

C50B6.8 C50B6.8 P W All gene names: nhr-168; C50B6.8; 5N814; CE31895; WBGene00008221; WP:CE31895 WormBase description: Ligand-binding domain of nuclear hormone receptors, Zinc finger, C4 type (two domains) (2 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated                                                      

C50F2.5 C50F2.5 P W All gene names: C50F2.5; 1E464; CE08911; WBGene00016839; WP:CE08911
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, GO                                
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, shared sperm                                                 

C50F4.2 C50F4.2 P W All gene names: C50F4.2; 5K13; CE05467; WBGene00008230; WP:CE05467 WormBase description: 6-phosphofructokinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C50F4.3 C50F4.3 P W All gene names: tag-329; C50F4.3; 5K15; CE05468; WBGene00008231; WP:CE05468 WormBase description: thiol protease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated, ViswanathanM et al                               
                                              2005  S2 daf-16 Resveratrol                                                        

C50F7.4 C50F7.4 P W All gene names: C50F7.4; 4I495; CE04242; SCB2; WBGene00016844; WP:CE04242 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: succinyl-CoA synthetase beta chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C52E4.3 C52E4.3 P W All gene names: snr-4; C52E4.3; C52E4.3.1; C52E4.3.2; 5M460; CE08945; NM_073603; WBGene00004917; WP:CE08945 WormBase description: small nuclear ribonucleoprotein D2 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories                                                                         

C53A5.4 C53A5.4 P W All gene names: tag-191; C53A5.4; 5P16; CE08953; WBGene00007049; WBGene00008264; WP:CE08953 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, shared sperm, Wang et al 2003  S8                            
                                              SAGE genes in the dauer exit, Wang et al 2003  S6                                  
                                              removed genes of contamination, Wang et al 2003  S7                                
                                              SAGE genes in the dataset                                                          

C53B7.7 C53B7.7 P W All gene names: C53B7.7; CE35438; WBGene00016896; WP:CE35438; XH480 WormBase description: C53B7.7 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; C53B7.7 has no clear orthologs in other organisms.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated                                                      

C53D6.4 C53D6.4 P W All gene names: C53D6.4; 4J784; CE36284; WBGene00008281; WP:CE36284 WormBase description: angiotensin receptor like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C54C6.2 ben-1 P W All gene names: ben-1; tbb-5; C54C6.2; 3E628; CE33770; NM_065327; WBGene00000248; WP:CE33770 WormBase description: A beta-tubulin that confers benzimidazole sensitivity. WormBase CDS description: tubulin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

C54G10.2 rfc-1 P W All gene names: rfc-1; C54G10.2; 5P124; CE20613; NM_074218; WBGene00004337; WP:CE20613 WormBase description: replication factor C 140 KD subunit like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, list of genes in cluster F, Reinke et al 2004, wt                            
                                              vs glp-4 enriched genes, Reinke et al 2004, list of                                
                                              genes in cluster order, Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen                                                               

C55A6.4 C55A6.4 P W All gene names: C55A6.4; 5L998; CE09001; WBGene00008333; WP:CE09001 WormBase description: alcohol dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              list of genes in cluster D, Reinke et al 2004, fem3                                
                                              enriched genes                                                                     

C55A6.6 C55A6.6 P W All gene names: C55A6.6; 5L994; CE09003; WBGene00008335; WP:CE09003 WormBase description: alcohol dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem3 enriched                                  
                                              genes, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

C55A6.7 C55A6.7 P W All gene names: C55A6.7; 5M2; CE09004; WBGene00008336; WP:CE09004 WormBase description: alcohol dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, fem3 enriched                               
                                              genes                                                                              

C55B7.1 glh-2 P W All gene names: glh-2; C55B7.1; 1H93; CE09012; NM_059475; WBGene00001599; WP:CE09012 WormBase description: glh-2 encodes a putative DEAD-box RNA helicase that contains six CCHC zinc fingers and is homologous to Drosophila VASA, a germ-line-specific, ATP-dependent, RNA helicase; at non-permissive temperatures, GLH-2 plays a role in germ-line development and fertility, specifically in regulating the normal extent of germ-line proliferation, oogenesis, and the production of functional sperm; GLH-2 activity may also be required for the wild-type morphology of P granules and for localization of several protein components, but not accumulation of P granule mRNA components; GLH-2 interacts in vitro with itself and with KGB-1, a JNK-like MAP kinase; GLH-2 is a constitutive P granule component and thus, with the exception of mature sperm, is expressed in germ cells at all stages of development; GLH-2 is cytoplasmic in oocytes and the early embryo, while perinuclear in all later developmental stages as well as in the distal and medial regions of the hermaphrodite gonad; GLH-2 is expressed at barely detectable levels in males. WormBase CDS description: RNA helicase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

C55C2.2 ssp-19 P W All gene names: ssp-19; C55C2.2; 1D131; CE09025; NM_058599; WBGene00006047; WP:CE09025
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C55C3.4 C55C3.4 P W All gene names: C55C3.4; 4G442; CE06991; WBGene00016954; WP:CE06991 WormBase description: tyrosine-protein kinase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C56C10.9 C56C10.9 P W All gene names: C56C10.9; 2G880; CE02574; WBGene00016965; WP:CE02574
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, intrinsic, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

CD4.6 pas-6 P W All gene names: pas-6; CD4.6; CD4.6.1; CD4.6.2; 5G64; CE16954; NM_072071; WBGene00003927; WP:CE16954 WormBase description: pas-6 encodes a type 1 alpha subunit of the 26S proteasome's 20S protease core particle (CP); PAS-6 is required for embryonic, larval, and germline development and by homology, is predicted to comprise the outer rings of the proteasome and to play a role in selective degradation of ubiquitinated proteins during development; in vitro, PAS-6 interacts with BRP-1, a glutamine/asparagine (Q/N)-rich domain-containing protein conserved amongst nematodes, and with other members of the proteasome. WormBase CDS description: protease
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

D1037.1 D1037.1 P W All gene names: D1037.1; D1037.1.1; D1037.1.2; 1E257; CE20620; WBGene00017025; WP:CE20620
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

D1046.3 D1046.3 P W All gene names: D1046.3; 4J697; CE03096; WBGene00008364; WP:CE03096 WormBase description: mitochondrial carrier protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories                                                                         

D1054.2 pas-2 P W All gene names: pas-2; tag-166; D1054.2; 5L251; CE05521; NM_073349; WBGene00003923; WP:CE05521 WormBase description: pas-2 encodes a proteasome subunit with highest similarity to vertebrate proteasome alpha 2 subunits. WormBase CDS description: proteasome component C3
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

D1081.8 D1081.8 P W All gene names: phi-7; D1081.8; D1081.8.1; D1081.8.2; 1J71; CE05540; WBGene00008386; WP:CE05540 WormBase description: MYB transforming protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E                                                                                  

D2005.5 D2005.5 P W All gene names: drh-3; ekl-3; D2005.5; 1I401; CE36120; WBGene00008400; WP:CE36120 WormBase description: RNA helicase like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Romagnolo et al 2002  Fig3b                                   
                                              Metabolism, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol                                                                        

D2013.5 D2013.5 P W All gene names: eat-3; mgm-1; D2013.5; 2J619; CE32846; NM_063585; WBGene00001134; WP:CE32846 WormBase description: The eat-3 gene encodes a mitochondrial dynamin-related protein, closely related to bacterial dynamin-like proteins, that is orthologous to human OPA1 (OMIM:203740, mutated in autosomal dominant optic atrophy); EAT-3 is localized to the mitochondrial matrix and may play a role in regulating inner mitochondrial membrane morphology; EAT-3 is expressed in body wall muscle, intestine, and neurons, all tissues with high metabolic rates. WormBase CDS description: GTP-binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2 daf-16                            
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

D2024.1 D2024.1 P W All gene names: D2024.1; 4I11; CE04290; WBGene00017050; WP:CE04290
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

D2030.7 D2030.7 P W All gene names: D2030.7; D2030.7.1; D2030.7.2; 1I165; CE30270; WBGene00008417; WP:CE30270 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

D2045.5 D2045.5 P W All gene names: D2045.5; 3L558; CE00935; WBGene00008423; WP:CE00935 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

D2045.7 D2045.7 P W All gene names: D2045.7; 3L565; CE37761; WBGene00008424; WP:CE37761 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, fem3 enriched genes,                             
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S8 SAGE genes in the dauer exit                                           

D2085.1 D2085.1 P W All gene names: pyr-1; D2085.1; 2I947; CE03105; NM_063437; WBGene00004259; WP:CE03105 WormBase description: pyr-1 is orthologous to the human gene CARBAMYL PHOSPHATE SYNTHETASE I (CPS1, which when mutated leads to hyperammonemia (OMIM:237300); PYR-1 protein is predicted to be mitochondrial with 68% accuracy. WormBase CDS description: glutamine-dependent carbamoyl-phosphate synthase, aspartate carbamoyltransferase, dihydroorotase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, mixed oogenesis soma, Reinke et al 2004, list                             
                                              of genes in cluster C, Reinke et al 2004, GO                                       
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

D2092.7 tsp-19 P W All gene names: tsp-19; D2092.7; 1H195; CE25838; NM_059503; WBGene00006645; WP:CE25838 WormBase description: transpanin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, list of genes in cluster D, Reinke et al 2004,                               
                                              fem3 enriched genes                                                                

D2096.1 D2096.1 P W All gene names: D2096.1; 4J163; CE04299; WBGene00017069; WP:CE04299
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

D2096.3 D2096.3 P W All gene names: D2096.3; D2096.3.1; D2096.3.2; D2096.3.3; 4J139; CE33610; WBGene00017071; WP:CE33610
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, GO categories, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated                                                   

D2096.4 D2096.4 P W All gene names: sqv-1; D2096.4; D2096.4.1; D2096.4.2; 4J127; CE04302; NM_069017; WBGene00005019; WP:CE04302 WormBase description: sqv-1 encodes a UDP-glucuronic acid decarboxylase, biochemically active in vitro, that is required for cytokinesis of one-cell embryos and for vulval morphogenesis; SQV-1 is coexpressed with the nucleotide-sugar transporter homolog SQV-7 in in the vulva and in oocytes; SQV-1 colocalizes with SQV-5 and SQV-7 to punctate foci (probably the Golgi apparatus) in the cytoplasm of the vulva, the uterus and oocytes, within which SQV-1 may act to promote the biosynthesis of chondroitin glycosaminoglycans; the common requirement for SQV-1 in both cytokinesis and morphogenesis may be to promote filling an extracellular space with hygroscopic proteoglycans (either in the eggshell, or underneath the L4 cuticle), which in turn may cause the space to fill with fluid.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, McElwee et al 2003  T1 targets of                            
                                              daf-16, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, herm soma enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster E,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

D2096.8 D2096.8 P W All gene names: D2096.8; 4J144; CE04306; WBGene00017075; WP:CE04306
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, mixed oogenesis soma, Reinke et al 2004, GO                               
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

DC2.1 srh-80 P W All gene names: srh-80; DC2.1; 5A699; CE26697; NM_070756; WBGene00005301; WP:CE26697 WormBase description: 7TM chemoreceptor, srh family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes                                             

DH11.3 DH11.3 P W All gene names: pgp-11; DH11.3; 2I286; CE34788; NM_063273; WBGene00004005; WP:CE34788 WormBase description: pgp-11 encodes an ATP-binding protein that is a member of the P-glycoprotein subclass of the ATP-binding cassette (ABC) transporter superfamily; pgp-11 is predicted to function as a transmembrane protein that couples energy to transport of various molecules across membranes, but as loss of pgp-11 activity via large-scale RNAi screens does not result in any obvious defects, the precise role of pgp-11 in C. elegans development and/or behavior is not yet known; pgp-11 promoter-gfp fusion proteins are expressed in the excretory cell and in the intestine. WormBase CDS description: multidrug resistance protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, herm soma enriched genes, Wang et al                            
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              Dauer Enriched, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

E01G4.5 E01G4.5 P W All gene names: E01G4.5; 2N763; CE23623; WBGene00008447; WP:CE23623
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, mixed oogenesis soma, Reinke et al 2004, IVb                              
                                              male soma enriched genes, Reinke et al 2004, GO                                    
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S8 SAGE genes in the dauer                             
                                              exit, Wang et al 2003  S7 SAGE genes in the dataset                                

E01G6.3 E01G6.3 P W All gene names: E01G6.3; CE09114; WBGene00008451; WP:CE09114; XM861 WormBase description: serine esterase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes                                               

E01H11.1 kin-11 P W All gene names: kin-11; pkc-2; E01H11.1; E01H11.1a.1; E01H11.1a.2; CE30927; CE30928; CE30929; PKC2A; PKC2B; WBGene00004033; WP:CE30927; WP:CE30928; WP:CE30929; XK3 WormBase description: pkc-2 is orthologous to the human gene PROTEIN KINASE C ALPHA (AA 1-672) (PRKCA; OMIM:176960), which when mutated leads to disease. WormBase CDS description: Protein kinase C
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, herm soma                                 
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

E02H4.6 E02H4.6 P W All gene names: E02H4.6; CE05552; WBGene00008464; WP:CE05552; XO868 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Lund et al 2002  Fig3D Oocyte-en, Reinke et al                             
                                              2004, fem1 enriched genes, Reinke et al 2004, list of                              
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, GO categories, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

E02H9.5 E02H9.5 P W All gene names: E02H9.5; 3D533; CE09122; WBGene00017103; WP:CE09122 WormBase description: E02H9.5 is orthologous to the human gene LPH PREPRO-POLYPEPTIDE (AA -19 TO 1908) (LCT; OMIM:603202), which when mutated leads to disease. WormBase CDS description: glycosyl hydrolase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005 S2 Resveratrol regulate WT                                 

E03A3.2 E03A3.2 P W All gene names: rcq-5; E03A3.2; 3F144; CE00941; NM_065409; WBGene00004322; WP:CE00941 WormBase description: DNA helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories                                                                

E03A3.4 E03A3.4 P W All gene names: his-70; E03A3.4; 3F150; CE00943; NM_065411; WBGene00001944; WP:CE00943 WormBase description: his-70 encodes an H3 histone. WormBase CDS description: histone H3
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

E03H12.10 ssp-9 P W All gene names: ssp-9; E03H12.10; E03H12.10.1; E03H12.10.2; 4F758; CE09149; NM_068296; WBGene00006038; WP:CE09149
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004,                                
                                              list of genes in cluster D, Reinke et al 2004, shared                              
                                              sperm, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

E04F6.7 E04F6.7 P W All gene names: dhs-7; E04F6.7; 2H496; CE01219; NM_063099; WBGene00000971; WP:CE01219 WormBase description: dhs-7 encodes a short-chain dehydrogenase predicted to be mitochondrial. WormBase CDS description: Ribitol dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, mixed sperm soma, Reinke                             
                                              et al 2004, wt herm vs wt herm enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, fem3                                    
                                              enriched genes                                                                     

EEED8.12 EEED8.12 P W All gene names: EEED8.12; 2F700; CE01885; WBGene00017140; WP:CE01885 WormBase description: Probable RNA binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

EEED8.5 mog-5 P W All gene names: CeHRH-1; mog-5; EEED8.5; 2F695; CE01889; NM_062618; WBGene00003393; WP:CE01889 WormBase description: The mog-5 gene encodes a DEAH helicase orthologous to the Drosophila CG8241, the human HRH1, and the S. cerevisiae PRP22 proteins. WormBase CDS description: RNA helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

F01D4.2 F01D4.2 P W All gene names: ugt-44; F01D4.2; 4L235; CE09154; WBGene00008486; WP:CE09154 WormBase description: UDP-glucoronosyltransferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, Reinke et al 2004, fem3                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

F01D4.3 F01D4.3 P W All gene names: F01D4.3; 4L236; CE33771; WBGene00008487; WP:CE33771 WormBase description: tyrosine-protein kinase (FES/FPS subfamily)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, GO                                   
                                              categories, Reinke et al 2004, fem3 enriched genes                                 

F01D5.7 F01D5.7 P W All gene names: F01D5.7; 2O301; CE18564; CE35448; WBGene00008497; WP:CE18564; WP:CE35448
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes                                                                

F01D5.8 F01D5.8 P W All gene names: F01D5.8; 2O303; CE18565; WBGene00008498; WP:CE18565
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              list of genes in cluster D, Reinke et al 2004, fem3                                
                                              enriched genes, Zhang et al. 2002, Fig2b overexpressed                             
                                              in mec-3MT                                                                         

F01F1.5 F01F1.5 P W All gene names: dpf-4; F01F1.5; F01F1.5.1; F01F1.5.2; 3G951; CE01231; NM_065863; WBGene00001057; WP:CE01231
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

F01G4.2 ard-1 P W All gene names: ard-1; F01G4.2; 4L897; CE03127; NM_069682; WBGene00000181; WP:CE03127 WormBase description: ard-1 encodes a homolog of mammalian 3-hydroxyacyl-CoA dehydrogenase (HADH II)/amyloid-beta binding alcohol dehydrogenase (ABAD) that is predicted to be mitochondrial. WormBase CDS description: short-chain alcohol dehydrogenase
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , McCarroll et al 2004  SFig1-4                                 
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Climbing, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

F01G4.6 F01G4.6 P W All gene names: F01G4.6; F01G4.6.1; F01G4.6.2; F01G4.6.3; F01G4.6.4; 4L912; CE09162; WBGene00008505; WP:CE09162 WormBase description: phosphate carrier protein precursor
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

F02A9.6 glp-1 P W All gene names: emb-33; glp-1; F02A9.6; 3K187; CE00237; NM_066613; WBGene00001609; WP:CE00237 WormBase description: glp-1 encodes an N-glycosylated transmembrane protein that, along with LIN-12, comprises one of two C. elegans members of the LIN-12/Notch family of receptors; from the N- to the C-terminus, GLP-1 is characterized by ten extracellular EGF-like repeats, three LIN-12/Notch repeats, a CC-linker, a transmembrane domain, a RAM domain, six intracellular ankyrin repeats, and a PEST sequence; in C. elegans, GLP-1 activity is required for cell fate specification in germline and somatic tissues; in the germline, GLP-1, acting as a receptor for the DSL family ligand LAG-2, is essential for mitotic proliferation of germ cells and maintenance of germline stem cells; in somatic tissues, maternally provided GLP-1, acting as a receptor for the DSL family ligand APX-1, is required for inductive interactions that specify the fates of certain embryonic blastomeres; GLP-1 is also required for some later embryonic cell fate decisions, and in these decisions its activity is functionally redundant with that of LIN-12; GLP-1 expression is regulated temporally and spatially via translational control, as GLP-1 mRNA, present ubiquitously in the germline and embryo, yields detectable protein solely in lateral, interior, and endomembranes of distal, mitotic germ cells, and then predominantly in the AB blastomere and its descendants in the early embryo; proper spatial translation of glp-1 mRNA in the embryo is dependent upon genes such as the par genes, that are required for normal anterior-posterior asymmetry in the early embryo; signaling through GLP-1 controls the activity of the downstream Notch pathway components LAG-3 and LAG-1, the latter being predicted to function as part of a transcriptional feedback mechanism that positively regulates GLP-1 expression; signaling through the DNA-binding protein LAG-1 is believed to involve a direct interaction between LAG-1 and the GLP-1 RAM and ankyrin domains WormBase CDS description: GLP-1 protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

F02D8.4 F02D8.4 P W All gene names: F02D8.4; 5P467; CE39143; WBGene00008521; WP:CE39143 WormBase description: carboxypeptidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, mixed sperm soma,                             
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              list of genes in cluster D, Reinke et al 2004, fem3                                
                                              enriched genes                                                                     

F02E11.1 F02E11.1 P W All gene names: F02E11.1; 2D571; CE36815; WBGene00017179; WP:CE36815 WormBase description: ABC transpoter
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, spermatogenesis enriched                              
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, shared sperm                                        

F02E9.7 F02E9.7 P W All gene names: F02E9.7; 1I991; CE09190; WBGene00008531; WP:CE09190 WormBase description: acid phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F07A5.7 unc-15 P W All gene names: unc-15; F07A5.7; F07A5.7.1; F07A5.7.2; F07A5.7.3; F07A5.7.4; 1H954; CE09197; NM_059684; WBGene00006754; WP:CE09197 WormBase description: The unc-15 gene encodes a paramyosin ortholog; UNC-15 protein physically interacts with MHC A, one isoform of myosin heavy chain (MHC) in striated muscle; UNC-15 accumulation is decreased in the absence of UNC-54 (myosin B), implying that degradation of UNC-15 is inhibited by its binding myosin B; conversely, myosin B (but not MYO-3/myosin A) fails to accumulate in unc-15 mutants. WormBase CDS description: paramyosin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Reinke et al 2004, IVb male soma enriched                               
                                              genes, Roy et al 2002  S2 positivecontrol L1 muscle,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F07H5.9 F07H5.9 P W All gene names: F07H5.9; 2J94; CE35850; WBGene00008560; WP:CE35850 WormBase description: acid phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, Wang et al 2003  S4                             
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

F08A8.1 F08A8.1 P W All gene names: F08A8.1; F08A8.1a.1; F08A8.1a.2; F08A8.1b.1; F08A8.1b.2; F08A8.1b.3; F08A8.1b.4; F08A8.1c.1; F08A8.1c.2; 1N533; CE17633; CE36125; CE39570; WBGene00008564; WP:CE17633; WP:CE36125; WP:CE39570 WormBase description: F08A8.1 is orthologous to the human gene ACYL-CoA OXIDASE 1, PALMITOYL (ACOX1; OMIM:264470), which when mutated leads to pseudoneonatal adrenoleukodystrophy.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

F08A8.3 F08A8.3 P W All gene names: F08A8.3; 1N541; CE17635; WBGene00008566; WP:CE17635 WormBase description: ACYL-COENZYME A OXIDASE, PEROXISOMAL (EC 1.3.3.6) (PALMITOYL-COA OXIDASE) (AOX)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, mixed sperm soma, Reinke                             
                                              et al 2004, GO categories, Reinke et al 2004, herm soma                            
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F08A8.4 F08A8.4 P W All gene names: F08A8.4; 1N545; CE17636; WBGene00008567; WP:CE17636 WormBase description: ACYL-COENZYME A OXIDASE, PEROXISOMAL (EC 1.3.3.6) (PALMITOYL-COA OXIDASE) (AOX)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, Romagnolo et al 2002                            
                                               Fig3b Metabolism, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

F08B4.7 F08B4.7 P W All gene names: F08B4.7; F08B4.7.1; F08B4.7.2; 4J452; CE09232; WBGene00017238; WP:CE09232 WormBase description: U1 small nuclear ribonucleoprotein C
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

F08B6.1 F08B6.1 P W All gene names: F08B6.1; F08B6.F; 1H339; CE39717; WBGene00017239; WP:CE39717
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

F08F3.2 F08F3.2 P W All gene names: acl-6; F08F3.2; F08F3.2a.1; F08F3.2a.2; 5F913; CE09258; CE35851; WBGene00017261; WP:CE09258; WP:CE35851 WormBase description: glycerol-3-phosphate acyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

F08F3.3 rhr-1 P W All gene names: rhr-1; F08F3.3; F08F3.3.1; F08F3.3.2; 5F907; CE09259; NM_072035; WBGene00004358; WP:CE09259 WormBase description: rhr-1 encodes an ortholog of human Rhesus blood-group associated glycoprotein (RHAG; OMIM:180297, mutated in chronic hemolytic anemia), a member of the ammonium transporter family, and affects general levels of mRNA transcripts, and embryonic viability in a large-scale RNAi screen. WormBase CDS description: blood group RH(D) polypeptide
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F08F3.7 F08F3.7 P W All gene names: ccp-14A5; cyp-14A5; F08F3.7; 5F900; CE09262; NM_072034; WBGene00000373; WP:CE09262 WormBase description: ccp-14A5 encodes a member of the cytochrome P450 family. WormBase CDS description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Menzel et al 2001  T3 CYP genes,                                 
                                              ReichertK et al 2005 T1 xenobiotic induced P450, Reinke                            
                                              et al 2004, fem3 enriched genes, Reinke et al 2004,                                
                                              mixed sperm soma, Reinke et al 2004, GO categories,                                
                                              Romagnolo et al 2002  Fig3b Oxidation, ViswanathanM et                             
                                              al 2005  S2 daf-16 Resveratrol, Wang et al 2003  S4                                
                                              TransientList, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

F08G2.3 F08G2.3 P W All gene names: his-42; F08G2.3; 2O120; NM_064498; WBGene00001916 WormBase description: his-42 encodes an H3 histone. WormBase CDS description: Core histones H2A, H2B, H3 and H4
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

F08G5.2 F08G5.2 P W All gene names: acl-13; F08G5.2; 4N177; CE05572; NM_069969; WBGene00008581; WP:CE05572
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

F09C12.2 F09C12.2 P W All gene names: F09C12.2; 2F401; CE32359; WBGene00017277; WP:CE32359 WormBase description: Ser/Thr protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, GO categories, Reinke                            
                                              et al 2004, list of genes in cluster D                                             

F09C3.2 F09C3.2 P W All gene names: F09C3.2; 1O862; CE36126; WBGene00008610; WP:CE36126 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: haloacid dehalogenase-like hydrolase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, Reinke et al 2004, IVb male soma                              
                                              enriched genes, Wang et al 2003  S3  genes pass one-way                            
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F09C6.4 srp-10 P W All gene names: srp-10; F09C6.4; 5R377; NM_074868; WBGene00005651
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

F09C6.5 srp-9 P W All gene names: srp-9; F09C6.5; 5R374; NM_074867; WBGene00005650
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , Golden et al 2004, N2 vs daf-2 age                            
                                              different gene, Reinke et al 2004, herm sperm, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes                                                          

F09D1.1 F09D1.1 P W All gene names: F09D1.1; 2C865; CE20660; WBGene00017280; WP:CE20660 WormBase description: ubiquitin protease
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, GO                              
                                              categories                                                                         

F09E5.1 F09E5.1 P W All gene names: pkc-3; F09E5.1; F09E5.1.1; F09E5.1.2; 2F673; CE02604; NM_062610; WBGene00004034; WP:CE02604 WormBase description: Protein kinase C
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

F09E5.3 F09E5.3 P W All gene names: F09E5.3; F09E5.3.1; F09E5.3.2; 2F665; CE02610; WBGene00017283; WP:CE02610 WormBase description: Deoxyribose-phosphate aldolase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F09E8.3 msh-5 P W All gene names: msh-5; F09E8.3; 4N927; CE26678; NM_070130; WBGene00003421; WP:CE26678 WormBase description: msh-5 encodes a germline-specific homolog of the yeast and mammalian DNA mismatch repair protein MSH5 (MutS-family) that is required for crossing over and chiasma formation during Caenorhabditis elegans meiosis; inactivation of both rad-51 and msh-5 induces chromosome fragmentation, not seen with inactivation of either gene alone. WormBase CDS description: Yeast DNA mismatch repair protein MSH5 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              F, Reinke et al 2004, fem1 enriched genes, Reinke et al                            
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F09F7.3 F09F7.3 P W All gene names: F09F7.3; F09F7.3.1; F09F7.3.2; 3G653; CE30653; WBGene00017300; WP:CE30653
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

F09G2.3 F09G2.3 P W All gene names: F09G2.3; 5H667; CE32858; WBGene00017312; WP:CE32858 WormBase description: permease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, Wang et al 2003  S3  genes pass                               
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

F09G2.8 F09G2.8 P W All gene names: F09G2.8; F09G2.8.1; F09G2.8.2; 5H670; CE09303; WBGene00017316; WP:CE09303
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F10C2.4 F10C2.4 P W All gene names: F10C2.4; 5M525; CE09308; WBGene00008645; WP:CE09308 WormBase description: F10C2.4 encodes a homolog of the DNA polymerase delta complex subunit A that is required in embryos for the normal timing of embryonic cell divisions (much as DIV-1 is) and, also, for normal chromosome segregation (probably because of defective DNA replication). WormBase CDS description: DNA polymerase family B
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F10C2.5 F10C2.5 P W All gene names: F10C2.5; CE09309; NM_073617; WBGene00008646; WP:CE09309 WormBase description: mannosyl-oligosaccharide alpha-1,2-mannosidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, GO categories, Romagnolo et al 2002  Fig3b                                
                                              Adhesion                                                                           

F10C2.6 drs-2 P W All gene names: drs-2; F10C2.6; 5M531; CE31906; NM_073618; WBGene00001095; WP:CE31906 WormBase description: drs-2 encodes a putative aspartyl-tRNA synthetase. WormBase CDS description: aspartyl-tRNA synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Romagnolo et al 2002                                 
                                              Fig3b Protein Synthesis, ViswanathanM et al 2005  S2                               
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F10D2.10 F10D2.10 P W All gene names: F10D2.10; 5H634; CE32860; WBGene00017335; WP:CE32860
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, Wang et al 2003  S4 Early genes,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

F10E7.11 F10E7.11 P W All gene names: F10E7.11; 2H410; CE32367; WBGene00017352; WP:CE32367
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

F10E7.5 F10E7.5 P W All gene names: F10E7.5; 2H403; CE04360; WBGene00017347; WP:CE04360
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

F10F2.2 F10F2.2 P W All gene names: F10F2.2; 3F710; CE17651; WBGene00008654; WP:CE17651 WormBase description: Phosphoribosylformylglycinamidine synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, GO categories, Reinke et al                            
                                              2004, herm soma enriched genes, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

F10G7.2 F10G7.2 P W All gene names: tsn-1; F10G7.2; F10G7.2.1; F10G7.2.2; 2E999; CE02626; NM_062438; WBGene00006626; WP:CE02626 WormBase description: human 100 kDa activator protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories                                                          

F10G7.4 coh-2 P W All gene names: rad-21.1; coh-2; scc-1; F10G7.4; 2E989; CE02628; NM_062435; WBGene00004737; WP:CE02628 WormBase description: scc-1 encodes a member of the Rad21/Rec8-like family of cohesion proteins that affects embryonic viability, fertility, the rate of embryonic cell divisions and the incidence of male progeny; interacts with ATL-1, F56D12.5, and F11E6.1 based on yeast two-hybrid assays, and is expressed in nondividing embryonic and germline nuclei. WormBase CDS description: DNA double-strand break repair
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                 
                                              daf-16 Resveratrol                                                                 

F10G8.1 F10G8.1 P W All gene names: F10G8.1; 1K595; CE36642; WBGene00008661; WP:CE36642 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

F10G8.2 F10G8.2 P W All gene names: F10G8.2; 1K596; CE36532; WBGene00008662; WP:CE36532 WormBase description: Eukaryotic protein kinase domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt herm enriched gen, Reinke et al                             
                                              2004, fem3 enriched genes, Reinke et al 2004, wt males                             
                                              vs glp4 male enriched , Reinke et al 2004, mixed sperm                             
                                              soma, Reinke et al 2004, list of genes in cluster D,                               
                                              Reinke et al 2004, GO categories                                                   

F10G8.7 F10G8.7 P W All gene names: F10G8.7; 1K621; CE30750; WBGene00008665; WP:CE30750 WormBase description: DNA excision repair protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F11A10.3 F11A10.3 P W All gene names: F11A10.3; 4M854; CE35177; WBGene00008684; WP:CE35177 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig5                                    
                                              conserved w/ yeast, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, GO categories,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F11A3.1 F11A3.1 P W All gene names: F11A3.1; F11A3.1.1; F11A3.1.2; 5J989; CE05585; WBGene00008669; WP:CE05585 WormBase description: 4-coumarate-CoA ligase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

F11A3.2 F11A3.2 P W All gene names: F11A3.2; 5J997; CE05586; CE38501; WBGene00008670; WP:CE05586; WP:CE38501 WormBase description: guanine nucleotide exchange factor
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S4 genes pass two-wayANOVA P0                                                     

F12A10.3 F12A10.3 P W All gene names: F12A10.3; 2F781; WBGene00017392
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, fem3 enriched                              
                                              genes                                                                              

F12A10.4 F12A10.4 P W All gene names: F12A10.4; 2F779; CE01907; WBGene00017393; WP:CE01907 WormBase description: F12A10.4 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F12A10.4 has no clear orthologs in other organisms. WormBase CDS description: Neprilysin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

F12F6.3 rib-1 P W All gene names: rib-1; F12F6.3; F12F6.3.1; F12F6.3.2; 4M347; CE24898; NM_069779; WBGene00004360; WP:CE24898 WormBase description: The rib-1 gene encodes an ortholog of human EXT1, which when mutated leads to hereditary multiple exostoses, type I (OMIM:133700). WormBase CDS description: MULTIPLE EXOSTOSES HOMOLOG 1
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E                                                

F13A7.1 F13A7.1 P W All gene names: F13A7.1; 5Q856; CE15808; WBGene00008724; WP:CE15808
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F13D12.9 F13D12.9 P W All gene names: F13D12.9; VF13D12L.D; 2L998; CE20683; WBGene00008743; WP:CE20683
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt herm enriched gen, Reinke et al                             
                                              2004, fem3 enriched genes, Reinke et al 2004, wt males                             
                                              vs glp4 male enriched , Reinke et al 2004, mixed sperm                             
                                              soma, Reinke et al 2004, GO categories, Reinke et al                               
                                              2004, list of genes in cluster D, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 Early genes,                               
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

F13G3.6 F13G3.6 P W All gene names: F13G3.6; 1H880; CE05618; WBGene00008766; WP:CE05618 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: B.subtilis teichoic acids biosynthesis protein GGAB like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F14B4.2 F14B4.2 P W All gene names: F14B4.2; F14B4.2a.1; F14B4.2a.2; 1J848; CE05628; CE36925; WBGene00008780; WP:CE05628; WP:CE36925 WormBase description: hexokinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E                                                                                  

F14B4.3 F14B4.3 P W All gene names: F14B4.3; 1J858; CE05629; WBGene00008781; WP:CE05629 WormBase description: DNA-directed RNA polymerase I
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol, Wang et al 2003  S5 genes common to                                   
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F14D2.1 F14D2.1 P W All gene names: bath-27; F14D2.1; 2D651; CE16976; WBGene00017450; WP:CE16976
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F14D2.4 F14D2.4 P W All gene names: bath-29; F14D2.4; 2D647; CE16979; CE31788; WBGene00017452; WP:CE16979; WP:CE31788
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, Fig2b shared                                   
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F14D2.8 F14D2.8 P W All gene names: F14D2.8; 2D638; CE37000; WBGene00017456; WP:CE37000 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, GO categories, Reinke                            
                                              et al 2004, list of genes in cluster E, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F14D7.1 F14D7.1 P W All gene names: F14D7.1; 5O768; CE09379; WBGene00008788; WP:CE09379
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

F14E5.4 F14E5.4 P W All gene names: F14E5.4; 2I720; CE03207; WBGene00008802; WP:CE03207 WormBase description: acid phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, fem3 enriched genes, Reinke et al 2004, wt                                
                                              males vs glp4 male enriched , Reinke et al 2004, mixed                             
                                              sperm soma, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, herm soma enriched genes, Reinke                             
                                              et al 2004, GO categories                                                          

F14H3.2 F14H3.2 P W All gene names: F14H3.2; 5Q531; CE15827; WBGene00008821; WP:CE15827 WormBase description: Putative membrane protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, fem3 enriched genes, Reinke et al 2004,                                
                                              shared sperm                                                                       

F14H3.4 F14H3.4 P W All gene names: F14H3.4; 5Q534; CE15829; WBGene00008823; WP:CE15829
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F15B9.5 F15B9.5 P W All gene names: F15B9.5; 5N488; CE09410; WBGene00008849; WP:CE09410
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

F15D3.4 F15D3.4 P W All gene names: F15D3.4; 1M161; CE19795; WBGene00008854; WP:CE19795
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, spermatogenesis enriched genes, Reinke et al                              
                                              2004, fem3 enriched genes, Reinke et al 2004, wt vs                                
                                              glp-4 enriched genes, Reinke et al 2004, list of genes                             
                                              in cluster D, Reinke et al 2004, GO categories,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F15D4.1 F15D4.1 P W All gene names: btf-1; F15D4.1; 2N505; CE15856; NM_064401; WBGene00000274; WP:CE15856 WormBase description: btf-1 encodes a member of the TBP-associated family (TAF), with weak similarity to human TBP-associated factor 172. WormBase CDS description: helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F15H10.4 F15H10.4 P W All gene names: tag-314; F15H10.4; 5K908; CE31908; WBGene00008871; WP:CE31908
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Reinke et al 2004, GO categories                                                   

F16H11.3 F16H11.3 P W All gene names: F16H11.3; CE04398; NM_076394; WBGene00017532; WP:CE04398; XF264
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F17B5.1 F17B5.1 P W All gene names: F17B5.1; 1N779; CE15865; WBGene00008905; WP:CE15865
                                              
Member of lists (Publications lists):
                                              McElwee et al 2003  T1 targets of                                 
                                              daf-16, Murphy et al 2003  Fig2 Class1 elongate                                    
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, herm soma enriched genes, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              daf-16 Resveratrol                                                                 

F17E9.13 his-33 P W All gene names: his-33; F17E9.13; 4J100; NM_069007; WBGene00001907 WormBase description: his-33 encodes an H2A histone; by homology, HIS-33 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-33 is a replication-dependent histone locus that resides in the HIS5 cluster on chromosome IV.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F18A1.2 lin-26 P W All gene names: lin-26; F18A1.2; F18A1.2.1; F18A1.2.2; F18A1.2.3; 2H973; CE27972; WBGene00003012; WP:CE27972 WormBase description: lin-26 encodes a putative C2H2 zinc finger-containing protein required for proper differentiation of ectodermal and mesodermal epithelial cells; LIN-26 is expressed in many different cell types including the rectal rep cells, the somatic gonad, glial cells, and hypodermal cells; ectopic LIN-26 expression during embryogenesis induces epithelial-like cell fates suggesting that LIN-26 is sufficient for epithelial differentiation. WormBase CDS description: transcription factor
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, PAL-1 target genes,                             
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F18A1.5 F18A1.5 P W All gene names: F18A1.5; F18A1.5.1; F18A1.5.2; 2H955; CE04405; WBGene00017546; WP:CE04405 WormBase description: F18A1.5 encodes the C. elegans ortholog of the replication protein A (RPA) large subunit; by homology, the F18A1.5 gene product is predicted to function as a DNA binding and oligonucleotide oligosaccharide binding (OB) protein that is required for DNA replication, repair, and recombination; large-scale RNAi screens indicate that the product of F18A1.5 is essential for embryonic development, and that in yeast two-hybrid assays interacts with the product of M04F3.1, the RPA medium subunit; in situ hybridization studies indicate that F18A1.5 transcripts are expressed in germ cells. WormBase CDS description: replication factor A
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F18A11.1 puf-6 P W All gene names: puf-6; F18A11.1; 2N330; CE09451; NM_064372; WBGene00004242; WP:CE09451 WormBase description: The puf-6 gene encodes a predicted RNA binding protein that is a member of the conserved PUF (Pumilio and FBF) family of RNA binding proteins; PUF-6 appears to function redundantly with other PUF family members during primordial germ cell development, and interacts with GEX-3, a predicted transmembrane protein that is essential for embryonic tissue morphogenesis. WormBase CDS description: Pumilio-family RNA binding domains (aka PUM-HD, Pumilio homology domain) (6 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F18A12.1 F18A12.1 P W All gene names: F18A12.1; 2D713; CE09454; WBGene00017550; WP:CE09454 WormBase description: F18A12.1 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F18A12.1 has no clear orthologs in other organisms. WormBase CDS description: peptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

F18A12.4 F18A12.4 P W All gene names: F18A12.4; 2D697; CE36827; WBGene00017553; WP:CE36827 WormBase description: F18A12.4 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F18A12.4 has no clear orthologs in other organisms. WormBase CDS description: peptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F18A12.5 F18A12.5 P W All gene names: F18A12.5; 2D686; CE35493; WBGene00017554; WP:CE35493 WormBase description: F18A12.5 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F18A12.5 has no clear orthologs in other organisms. WormBase CDS description: peptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, spermatogenesis enriched genes, Reinke et al                              
                                              2004, fem3 enriched genes, Reinke et al 2004, wt vs                                
                                              glp-4 enriched genes, Reinke et al 2004, list of genes                             
                                              in cluster D, Reinke et al 2004, GO categories,                                    
                                              Romagnolo et al 2002  Fig3b Proteases, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

F18A12.6 F18A12.6 P W All gene names: F18A12.6; 2D690; CE09459; WBGene00017555; WP:CE09459 WormBase description: F18A12.6 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F18A12.6 has no clear orthologs in other organisms. WormBase CDS description: peptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

F18C5.2 wrn-1 P W All gene names: wrn-1; F18C5.2; 2G849; CE31791; NM_062923; WBGene00006944; WP:CE31791 WormBase description: wrn-1 encodes an ortholog of human WRN, which when mutated leads to Werner syndrome (OMIM:277700), and one of four C. elegans homologs of the RecQ DNA helicase family that includes E. coli RecQ; by homology, WRN-1 is predicted to function as a helicase, DNA-dependent ATPase, and exonuclease that plays a key role in DNA replication, recombination, and repair; in C. elegans, loss of wrn-1 activity, via mutation or large-scale RNA-mediated interference (RNAi) screens, does not result in any obvious abnormalities, as animals are viable and fertile, have normal lifespans, and do not appear to have a high rate of genomic instability.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, list of genes in cluster E                                                

F18C5.4 F18C5.4 P W All gene names: F18C5.4; 2G854; CE31792; WBGene00017559; WP:CE31792
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F18E2.1 F18E2.1 P W All gene names: F18E2.1; 5N238; CE05662; WBGene00008936; WP:CE05662 WormBase description: acid phophatase like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, wt herm vs wt male enriched                             
                                              gen, Reinke et al 2004, herm soma enriched genes,                                  
                                              Reinke et al 2004, GO categories, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 Early genes,                               
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

F18F11.4 F18F11.4 P W All gene names: F18F11.4; 4B87; CE39243; WBGene00017577; WP:CE39243 WormBase description: serine/threonine-protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, GO categories, Reinke                            
                                              et al 2004, list of genes in cluster B, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F19B10.9 F19B10.9 P W All gene names: sea-1; tbx-18; F19B10.9; CE09476; WBGene00004750; WP:CE09476
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Jones et al 2001  Non dauer                             
                                              genes P<0.05, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, Romagnolo et al 2002  Fig3b TF, ViswanathanM et al                              
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

F19B6.4 F19B6.4 P W All gene names: F19B6.4; 4N103; CE05669; WBGene00008950; WP:CE05669 WormBase description: white protein like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

F19F10.1 F19F10.1 P W All gene names: F19F10.1; 5I41; CE09481; WBGene00017598; WP:CE09481 WormBase description: DNA-binding protein
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              TF, Reinke et al 2004, wt herm vs wt herm enriched gen,                            
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              IVb male soma enriched genes, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 Dauer                                
                                              Enriched, Wang et al 2003  S4 genes pass two-wayANOVA                              
                                              P0                                                                                 

F20A1.2 F20A1.2 P W All gene names: F20A1.2; 5H529; CE35280; WBGene00017614; WP:CE35280
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes                                           

F20B4.6 F20B4.6 P W All gene names: F20B4.6; CE30960; WBGene00017625; WP:CE30960; XS315
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F20B6.1 F20B6.1 P W All gene names: F20B6.1; CE04423; WBGene00017627; WP:CE04423; XE819 WormBase description: protein tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes                                                                

F20D1.5 arl-7 P W All gene names: arl-7; F20D1.5; NM_078087; WBGene00000191; XP600
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 differentially                              
                                              expressed gen, Reinke et al 2004, list of genes in                                 
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, list of genes in cluster D, Reinke                              
                                              et al 2004, fem3 enriched genes                                                    

F20D6.6 F20D6.6 P W All gene names: F20D6.6; 5I641; CE07111; WBGene00017636; WP:CE07111 WormBase description: serine/threoninie protein phophatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F20E11.1 F20E11.1 P W All gene names: srz-48; F20E11.1; 5R936; CE18610; NM_075018; WBGene00008981; WP:CE18610
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories                                                                

F20G2.4 F20G2.4 P W All gene names: nas-24; F20G2.4; 5O251; CE35860; NM_074008; WBGene00003543; WP:CE35860 WormBase description: zinc metalloprotease
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, wt herm vs wt herm enriched                             
                                              gen, Reinke et al 2004, GO categories, Reinke et al                                
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

F20H11.4 F20H11.4 P W All gene names: F20H11.4; 3H699; CE20702; WBGene00017647; WP:CE20702 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, fem3 enriched                              
                                              genes                                                                              

F20H11.5 F20H11.5 P W All gene names: F20H11.5; 3H675; CE09514; WBGene00017648; WP:CE09514 WormBase description: D-amino acid oxidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes, Romagnolo et al                              
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F21A9.2 F21A9.2 P W All gene names: F21A9.2; 1E272; CE09522; WBGene00017651; WP:CE09522 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes                                                                

F21D5.1 F21D5.1 P W All gene names: F21D5.1; F21D5.1.1; F21D5.1.2; 4J491; CE03244; WBGene00009006; WP:CE03244 WormBase description: phosphoacetylglucosamine mutase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

F21D5.3 F21D5.3 P W All gene names: F21D5.3; F21D5.3.1; F21D5.3.2; F21D5.3.3; 4J499; CE03246; WBGene00009008; WP:CE03246 WormBase description: laccase like copper oxidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

F21F3.2 F21F3.2 P W All gene names: F21F3.2; 1F473; CE09532; WBGene00017672; WP:CE09532 WormBase description: ser/thr-protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F21G4.2 F21G4.2 P W All gene names: mrp-4; F21G4.2; CE09548; NM_077257; WBGene00003410; WP:CE09548; XK507 WormBase description: The mrp-4 gene encodes a homolog of human