Hill et al 2000, developmentally modulated cluster, 94 genes

Gene list file name:Hill2000_T1_cluster1-2.txt
Type of gene identifier:Affymetrix custom chip
Description:Hill et al 2000, Supplymental Dataset, developmentally modulated genes cluster(1,2)  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AFF_R05F9.12 Aff_R05F9.12 P W
AFF_T08A9.7 Aff_T08A9.7 P W
AFF_Y34B4A_3.C Aff_Y34B4A_3.C P W
B0495.4 Aff_B0495.4 P W All gene names: nhx-2; B0495.4; 2H982; CE29549; NM_063213; WBGene00003730; WP:CE29549 WormBase description: nhx-2 encodes a sodium/proton exchanger expressed in the apical membranes of intestinal cells; NHX-2 is required for normally high growth rates, and for propagation or maintenance of the germline, NHX-2 is thought to prevent intracellular acidification by catalysing the electroneutral exchange of extracellular sodium for an intracellular proton. WormBase CDS description: NA(+)/H(+) exchanger
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, herm soma enriched genes,                            
                                              Romagnolo et al 2002  Fig3b Transporters, Wang et al                               
                                              2003  S4 Early genes, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C01B10.6 Aff_C01B10.6 P W All gene names: C01B10.6; C01B10.6a.1; C01B10.6a.2; 4H409; CE29552; CE31149; WBGene00015280; WP:CE29552; WP:CE31149
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C02B10.1 Aff_C02B10.1 P W All gene names: C02B10.1; 4F852; CE16798; IVD; WBGene00015326; WP:CE16798 WormBase description: The C02B10.1 gene encodes an isovaleryl-CoA dehydrogenase; this function has been verified by both sequence homology and direct biochemical assay. WormBase CDS description: acyl-CoA dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C03G6.15 Aff_C03G6.15 P W All gene names: cyp-35A2; C03G6.15; 5H840; CE35217; NM_072479; WBGene00015400; WP:CE35217 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ReichertK et al 2005 T1 xenobiotic induced                               
                                              P450, Reinke et al 2004, herm soma enriched genes, Wang                            
                                              et al 2003  S6 removed genes of contamination                                      

C04G2.4 Aff_C04G2.4 P W All gene names: msp-36; C04G2.4; 4K861; NM_069433; WBGene00003432 WormBase description: msp-36 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family comprises of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSP is involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSP assembles into fibrous networks that drives movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C04G2.8 Aff_C04G2.8 P W All gene names: C04G2.8; 4K876; CE05216; WBGene00007307; WP:CE05216
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C05D2.8 Aff_C05D2.7, Aff_C05D2.8 P W All gene names: C05D2.8; 3G698; CE32116; WBGene00015469; WP:CE32116
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class2                               
                                              shorten lifespan, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated                                                                          

C09B9.6 Aff_C09B9.6 P W All gene names: msp-55; C09B9.6; 4F820; CE06798; NM_068310; WBGene00003448; WP:CE06798 WormBase description: msp-55 encodes a member of the major sperm protein family. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C09F12.1 Aff_C09F12.1 P W All gene names: clc-1; C09F12.1; CE08040; NM_077446; WBGene00000522; WP:CE08040; XL667 WormBase description: clc-1 encodes a claudin homolog, closely similar to CLC-2, that is required for normal cohesion of apical junctions in epithelia; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water; CLC-1 maintains the impermeability ('barrier function') of epithelia, since clc-1(RNAi) animals have abnormal permeability of the pharynx to dyes; clc-1 is expressed in spermatheca, pharynx, intestine, hypodermis, the excretory-secretory system, and the cell-cell junctions of the vulva; in pharyngeal cells, CLC-1 colocalizes with AJM-1 in long thin lines, parallel to the pharyngeal axis and lining the lumenal surface, that appear to correspond with apical intercellular junctions.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1 regulated                            

C14A6.1 Aff_C14A6.1 P W All gene names: clec-48; C14A6.1; 5S639; CE18493; WBGene00007565; WP:CE18493 WormBase description: Lectin C-type domain short and long forms (2 domains)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C14C6.5 Aff_C14C6.5 P W All gene names: C14C6.5; 5B15; CE08160; WBGene00015759; WP:CE08160
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C17G10.5 Aff_C17G10.5 P W All gene names: lys-8; C17G10.5; 2F877; CE06846; NM_062682; WBGene00003097; WP:CE06846
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

C24B9.3 Aff_C24B9.3 P W All gene names: C24B9.3; 5D186; CE17445; CE29672; WBGene00016048; WP:CE17445; WP:CE29672
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C24B9.9 Aff_C24B9.9 P W All gene names: dod-3; C24B9.9; 5D208; CE17451; NM_071341; WBGene00016052; WP:CE17451
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Murphy et al 2003  Fig2 Class1 elongate                            
                                              lifespan, Reinke et al 2004, IVb male soma enriched                                
                                              genes, Shen et al 2005  T1 hif-1 depend hypoxia, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 Dauer Enriched, Wang et al 2003  S4 genes pass                            
                                              two-wayANOVA P0                                                                    

C25B8.3 Aff_C25B8.3 P W All gene names: cpr-6; C25B8.3; CE04078; CE30876; NM_171708; WBGene00000786; WP:CE04078; WP:CE30876; XH227
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

C28C12.7 Aff_C28C12.6 P W All gene names: spp-10; C28C12.7; C28C12.7a.1; C28C12.7a.2; 4J243; CE29486; CE31323; NM_171399; NM_171400; WBGene00004995; WP:CE29486; WP:CE31323 WormBase description: spp-10 encodes two protein isoforms that are orthologous to the human gene PROSAPOSIN (PSAP; OMIM:176801, mutated in Gaucher disease and metachromatic leukodystrophy); SPP-10A and -10B are predicted to have 3 and 4 embedded saposin sequences, that are likely to be split into individual saposin peptides by proteolysis; in mammals, saposins activate the enzymes sphingomyelinphosphodiesterase and beta-glucosylceramidase; spp-10 has no obvious function in mass RNAi assays. WormBase CDS description: 7TM chemoreceptor, spp family
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              fem3 enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C31H5.6 Aff_C31H5.6 P W All gene names: C31H5.6; 1J620; CE17486; WBGene00007857; WP:CE17486
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S5 genes common to                                   
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

E03H12.7 Aff_E03H12.7 P W All gene names: E03H12.7; 4F752; CE09146; WBGene00017114; WP:CE09146
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F01F1.12 Aff_F01F1.12 P W All gene names: F01F1.12; F01F1.12a.1; F01F1.12a.2; F01F1.12a.3; F01F1.12b.1; F01F1.12b.2; 3G964; CE01225; CE30646; WBGene00017166; WP:CE01225; WP:CE30646 WormBase description: The F01F1.12 gene encodes a homolog of the human gene ADHUB, which when mutated leads to fructosemia (OMIM:229600).
F02A9.3 Aff_F02A9.3 P W All gene names: far-2; pes-3; F02A9.3; F02A9.3.1; F02A9.3.2; 3K171; CE00134; NM_066610; WBGene00001386; WP:CE00134 WormBase description: far-2 encodes a protein similar to a class of secreted fatty acid and retinol-binding proteins expressed in parasitic nematodes and secreted in the surrounding tissues of the host; expressed in body wall muscle and vulval cells of adult hermaphrodites, and transcript levels progressively increase during development.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F08A8.3 Aff_F08A8.3 P W All gene names: F08A8.3; 1N541; CE17635; WBGene00008566; WP:CE17635 WormBase description: ACYL-COENZYME A OXIDASE, PEROXISOMAL (EC 1.3.3.6) (PALMITOYL-COA OXIDASE) (AOX)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, mixed sperm soma, Reinke                             
                                              et al 2004, GO categories, Reinke et al 2004, herm soma                            
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F08B12.4 Aff_F08B12.4 P W All gene names: F08B12.4; F08B12.4.1; F08B12.4.2; CE26708; WBGene00008572; WP:CE26708; XM26
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, mixed sperm soma,                            
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S6                                 
                                              removed genes of contamination                                                     

F13D12.4 Aff_F13D12.4 P W All gene names: alh-8; F13D12.4; F13D12.4a.1; F13D12.4a.2; F13D12.4a.3; F13D12.4a.4; 2M21; CE02183; CE36262; WBGene00000114; WP:CE02183; WP:CE36262 WormBase description: alh-8 is orthologous to the human gene METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE (ALDH6A1; OMIM:603178), which when mutated leads to MMSDH deficiency.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F16B4.4 Aff_F16B4.4 P W All gene names: F16B4.4; 5C73; CE17014; WBGene00017506; WP:CE17014
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F21A3.2 Aff_F21A3.2 P W All gene names: F21A3.2; 5Q12; CE31909; WBGene00008992; WP:CE31909 WormBase description: acid phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F21D5.3 Aff_F21D5.3 P W All gene names: F21D5.3; F21D5.3.1; F21D5.3.2; F21D5.3.3; 4J499; CE03246; WBGene00009008; WP:CE03246 WormBase description: laccase like copper oxidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

F28B4.3 Aff_F28B4.3 P W All gene names: F28B4.3; CE07153; WBGene00017892; WP:CE07153; XD846 WormBase description: EGF-like repeat
                                              
Member of lists (Publications lists):
                                              Bishop et al 2004  T1 Upregulated in                              
                                              vhl-1 vs WT, Murphy et al 2003  Fig2 Class2 shorten                                
                                              lifespan, Wang et al 2003  S4 Early genes, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F28F8.2 Aff_F28F8.2 P W All gene names: acs-2; F28F8.2; F28F8.2.1; F28F8.2.2; CE09756; NM_074468; WBGene00009221; WP:CE09756 WormBase description: long-chain-fatty-acid-CoA ligase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Murphy et al 2003  Fig2 Class1 elongate                            
                                              lifespan, ReichertK et al 2005  T3 xenobiotic                                      
                                              downregulated, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

F32B5.8 Aff_F32B5.8 P W All gene names: cpz-1; F32B5.8; 1D256; CE36646; NM_058622; WBGene00000788; WP:CE36646 WormBase description: cysteine proteinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, Wang et al 2003  S5 genes common                              
                                              to feeding ANOVA, Wang et al 2003  S3  genes pass                                  
                                              one-way ANOVA                                                                      

F32B6.6 Aff_F32B6.6 P W All gene names: msp-77; F32B6.6; 4K659; CE09861; NM_069380; WBGene00003464; WP:CE09861 WormBase description: msp-77 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm                                                                       

F32D8.9 Aff_F32D8.9 P W All gene names: spp-16; F32D8.9; 5L378; CE05788; NM_073379; WBGene00005001; WP:CE05788
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F35C5.6 Aff_F35C5.6 P W All gene names: clec-63; F35C5.6; F35C5.6.1; F35C5.6.2; 2N187; CE15947; WBGene00009394; WP:CE15947 WormBase description: Lectin C-type domain short and long forms, von Willebrand factor type A domain
F35C5.8 Aff_F35C5.8 P W All gene names: clec-65; F35C5.8; 2N193; CE15949; WBGene00009396; WP:CE15949 WormBase description: von Willebrand factor type A domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F35C5.9 Aff_F35C5.9 P W All gene names: clec-66; F35C5.9; 2N195; CE15950; WBGene00009397; WP:CE15950 WormBase description: Lectin C-type domain short and long forms, von Willebrand factor type A domain
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 TransientList, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

F35C8.5 Aff_F35C8.5 P W All gene names: F35C8.5; CE04497; WBGene00018036; WP:CE04497; XF985
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F36H12.7 Aff_F36H12.7 P W All gene names: msp-19; F36H12.7; 4G25; CE02806; NM_068359; WBGene00003426; WP:CE02806 WormBase description: msp-19 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; msp-19 has a homolog in C. briggsae as predicted by the Wobble Aware Bulk Aligner (WABA); the msp gene family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein MSP-19
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

F40F9.2 Aff_F40F9.2 P W All gene names: tag-120; F40F9.2; 5K188; CE05851; WBGene00006470; WP:CE05851 WormBase description: tag-120 encodes a predicted transmembrane protein; as loss of tag-120 activity via RNAi does not result in any abnormalities, the precise role of TAG-120 in C. elegans development and/or behavior is not yet known; however, TAG-120 is homologous to a Drosophila NMDA receptor-associated protein and mammalian transmembrane proteins that function in Fas-mediated cell death, so TAG-120 may play a role in neuronal functions and/or apoptosis; a tag-120 reporter fusion is expressed in the nervous system, pharyngeal muscles, and to a lesser extent in the excretory system. WormBase CDS description: N-methyl-D-aspartate receptor associated protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F53A9.1 Aff_F53A9.1 P W All gene names: F53A9.1; CE02760; WBGene00018724; WP:CE02760; XJ331
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F54D5.4 Aff_F54D5.4 P W All gene names: F54D5.4; F54D5.4.1; F54D5.4.2; 2L861; CE03409; WBGene00010050; WP:CE03409
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F56A6.1 Aff_C18E3.7, Aff_F56A6.1 P W All gene names: F56A6.1; 1B93; CE25906; CE33401; WBGene00018921; WP:CE25906; WP:CE33401
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F56C9.7 Aff_F56C9.7 P W All gene names: F56C9.7; F56C9.7.1; F56C9.7.2; 3I404; CE01326; WBGene00018951; WP:CE01326
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F56F10.1 Aff_F56F10.1 P W All gene names: F56F10.1; F56F10.1.1; F56F10.1.2; CE34034; WBGene00018984; WP:CE34034; XB493 WormBase description: peptidase
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , Reinke et al 2004, list of genes                              
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F57F5.1 Aff_F57F5.1 P W All gene names: F57F5.1; 5M483; CE05999; WBGene00010204; WP:CE05999 WormBase description: cysteine protease
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1 regulated                            

F59B1.2 Aff_F59B1.2 P W All gene names: F59B1.2; F59B1.2.1; F59B1.2.2; 5E113; CE17943; WBGene00019097; WP:CE17943
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes                                                                              

K02A4.1 Aff_K02A4.1 P W All gene names: bcat-1; eca-39; K02A4.1; CE03457; ECA39; NM_077743; WBGene00001149; WP:CE03457; XN497 WormBase description: eca-39 encodes a branched-chain amino acid aminotransferase that, by homology, is predicted to catalyze the first reaction in the catabolism of essential branched-chain amino acids such as leucine, isoleucine, and valine; in C. elegans, large-scale RNA-mediated interference (RNAi) screens indicate that eca-39 activity is required for embryonic and larval development. WormBase CDS description: twt1 like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

K07F5.1 Aff_K07F5.1 P W All gene names: msp-81; K07F5.1; 4K600; NM_069358; WBGene00003467 WormBase description: msp-81 encodes a member of the major sperm protein family. WormBase CDS description: major sperm protein
K07F5.2 Aff_K07F5.2 P W All gene names: msp-10; K07F5.2; 4K603; CE03853; NM_069359; WBGene00003425; WP:CE03853 WormBase description: msp-10 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm                                                                       

K08F4.8 Aff_K08F4.8 P W All gene names: msp-38; K08F4.8; 4K908; CE06156; NM_069448; WBGene00003434; WP:CE06156 WormBase description: msp-38 encodes a member of the major sperm protein family; msp-38 has a C. briggsae homolog as predicted by the Wobble Bulk Aware Bulk Aligner (WABA). WormBase CDS description: major sperm protein MSP-38
K12H4.7 Aff_K12H4.7 P W All gene names: K12H4.7; K12H4.7b.1; K12H4.7b.2; 3J138; CE32696; CE32697; WBGene00019682; WP:CE32696; WP:CE32697
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class2                               
                                              shorten lifespan, Reinke et al 2004, herm soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

R01B10.3 Aff_R01B10.3 P W All gene names: R01B10.3; 5G524; CE18090; WBGene00019805; WP:CE18090
R05F9.13 Aff_R05F9.13 P W All gene names: msp-31; R05F9.13; 2F208; NM_062497; WBGene00003429 WormBase description: msp-31 encodes a member of the major sperm protein family; msp-31 has a C. briggsae homolog as predicted by the Wobble Aware Bulk Aligner (WABA); expression is enriched in sperm. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm                                                                       

R08E3.1 Aff_R08E3.1 P W All gene names: R08E3.1; CE33808; CE34352; WBGene00019957; WP:CE33808; WP:CE34352; XF453 WormBase description: LDL receptor-related protein
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S4 Early genes, Wang                             
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

R12A1.4 Aff_R12A1.4 P W All gene names: ges-1; R12A1.4; R12A1.4.1; R12A1.4.2; 5B906; CE28763; NM_071010; WBGene00001578; WP:CE28763; ges1 WormBase description: ges-1 encodes a gut-specific type B carboxylesterase; by homology, GES-1 hydrolyzes carboxylic ester substrates to yield an alcohol and a carboxylic anion, however, loss of GES-1 activity via mutation or RNAi does not result in any obvious abnormalities; GES-1 is expressed solely in the intestinal, or E, lineage from the 4 E-cell stage of gut development through adulthood; GES-1 contains a C-terminal endoplasmic reticulum (ER) retention sequence, KDEL, which suggests that it localizes to the ER lumen; GES-1 expression in the gut appears to be positively regulated by ELT-2, a gut-specific GATA-type transcription factor expressed throughout the C. elegans life cycle and essential for normal gut development. WormBase CDS description: carboxylesterase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, herm soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

R13H9.2 Aff_R13H9.2 P W All gene names: msp-57; R13H9.2; 4F827; NM_068312; WBGene00003450 WormBase description: msp-57 encodes a member of the major sperm protein family. WormBase CDS description: major sperm protein (MSP-57)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm                                                                       

R13H9.4 Aff_R13H9.4 P W All gene names: msp-53; R13H9.4; 4F828; NM_068313; WBGene00003446 WormBase description: msp-53 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; msp-53 has a C. briggsae homolog as identified by the Wobble Aware Bulk Aligner (WABA); the MSP family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein (MSP-53)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

R53.5 Aff_R53.5 P W All gene names: R53.5; 2K260; CE03575; WBGene00011274; WP:CE03575
R57.1 Aff_R57.1 P W All gene names: R57.1; R57.1b.1; R57.1b.2; R57.1c.1; R57.1c.2; R57.1c.3; CE12844; CE30114; CE37270; WBGene00020082; WP:CE12844; WP:CE30114; WP:CE37270; XA925 WormBase description: trans-membrane protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T04F8.8 Aff_T04F8.8 P W All gene names: T04F8.8; CE18927; WBGene00011446; WP:CE18927; XM267
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

T07C4.4 Aff_T07C4.4 P W All gene names: spp-1; T07C4.4; T07C4.4.1; T07C4.4.2; 3L444; CE35363; NM_066889; WBGene00004986; WP:CE35363 WormBase description: spp-1 encodes a predicted transmembrane protein containing a saposin (B) domain that is a member of a saposin-like protein superfamily containing mammalian NK-lysin and granulysin and the protozoan amoebapores; SPP-1 is predicted to function as a lipid-binding protein with cytotoxic, pore-forming activity, and in vitro, does exhibit antibacterial activity; loss of SPP-1 function via RNA-mediated interference (RNAi) does not, however, result in any abnormalities.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T07D10.4 Aff_H16D19.1 P W All gene names: clec-15; T07D10.4; 1N224; WBGene00011584 WormBase description: C-type lectin
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

T08A9.8 Aff_T08A9.8 P W All gene names: spp-4; T08A9.8; CE04923; NM_076836; WBGene00004989; WP:CE04923; XH938 WormBase description: 7TM chemoreceptor, spp family
T10E9.4 Aff_T10E9.4 P W All gene names: T10E9.4; T10E9.4.1; T10E9.4.2; 1H103; CE39771; WBGene00020414; WP:CE39771
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

T13F2.11 Aff_T13F2.11 P W All gene names: msp-78; T13F2.11; 4K535; CE13638; NM_069341; WBGene00003465; WP:CE13638 WormBase description: msp-78 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

T21G5.4 Aff_T21G5.4 P W All gene names: T21G5.4; 1H448; CE13894; WBGene00020661; WP:CE13894
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

T21H3.1 Aff_T21H3.1 P W All gene names: T21H3.1; 5B657; CE13898; CE38551; WBGene00020662; WP:CE13898; WP:CE38551
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T24H7.5 Aff_T24H7.5 P W All gene names: tat-4; T24H7.5; T24H7.5c.1; T24H7.5c.2; 2G526; CE21203; CE21204; CE21205; NM_062843; NM_062844; NM_062845; WBGene00020784; WP:CE21203; WP:CE21204; WP:CE21205 WormBase description: ATPase
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S4 TransientList,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

VZK822L.1 Aff_VZK822L.1 P W All gene names: fat-6; VZK822L.1; 4M678; CE18302; NM_069854; WBGene00001398; WP:CE18302 WormBase description: fat-6 encodes a delta-9 fatty acid desaturase that is predicted to be mitochondrial. WormBase CDS description: acyl-CoA desaturase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

W02A2.1 Aff_W02A2.A P W All gene names: fat-2; W02A2.1; 4O89; CE21231; NM_070159; WBGene00001394; WP:CE21231 WormBase description: The fat-2 gene encodes a delta-12 fatty acyl desaturase that increases membrane fluidity when expressed in yeast, and that may protect against cold stress; FAT-2's substrate is unknown, but may be acyl-CoA; FAT-2 is required in vivo for normal levels of C18 or C20 polyunsaturated fatty acids (PUFAs); FAT-2 is also required for a normally fast growth rate and movement rate, and for normal body shape, defecation rhythm, and brood size. WormBase CDS description: Fatty acid desaturase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

W02G9.4 Aff_W02G9.4 P W All gene names: W02G9.4; 5D147; CE18317; WBGene00020954; WP:CE18317
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, herm soma enriched genes                             

W04B5.3 Aff_W04B5.3 P W All gene names: W04B5.3; W04B5.3c.1; W04B5.3c.2; 3D513; CE29362; CE30200; CE32738; WBGene00021020; WP:CE29362; WP:CE30200; WP:CE32738
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

W04E12.6 Aff_W04E12.6, Aff_Y116F11.ZZ23 P W All gene names: clec-49; W04E12.6; 5U220; CE19001; WBGene00012251; WP:CE19001 WormBase description: Lectin C-type domain short and long forms (2 domains)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

W04E12.8 Aff_W04E12.8 P W All gene names: clec-50; W04E12.8; 5U222; CE19003; WBGene00012253; WP:CE19003 WormBase description: Lectin C-type domain short and long forms (2 domains)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

W05H9.1 Aff_W05H9.1 P W All gene names: W05H9.1; W05H9.1.1; W05H9.1.2; CE05036; WBGene00021048; WP:CE05036; XG891
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Zhang et al 2002, T1 mec-3 dependent genes,                             
                                              Zhang et al. 2002, Fig2b overexpressed in mec-3MT                                  

Y19D10A.9 Aff_F56A4.J P W All gene names: Y19D10A.9; 5C831; WBGene00021224
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan                                                                           

Y32F6A.5 Aff_F22E12.1 P W All gene names: Y32F6A.5; Y32F6A.5.1; Y32F6A.5.2; 5K932; CE32010; WBGene00012530; WP:CE32010
Y40D12A.2 Aff_Y40D12A.2 P W All gene names: Y40D12A.2; 3H703; CE19621; WBGene00021503; WP:CE19621 WormBase description: serine carboxypeptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, herm soma enriched genes,                            
                                              Reinke et al 2004, GO categories, ViswanathanM et al                               
                                              2005  S2 daf-16 Resveratrol, Wang et al 2003  S3  genes                            
                                              pass one-way ANOVA, Wang et al 2003  S4 Early genes,                               
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

Y43C5A.2 Aff_Y43C5A.2 P W All gene names: Y43C5A.2; 4L35; CE19151; WBGene00012782; WP:CE19151 WormBase description: Fibrinogen beta and gamma chains, C-terminal globular domain
Y49E10.16 Aff_Y49E10.P P W All gene names: Y49E10.16; Y49E10.P; 3N521; CE22231; WBGene00013035; WP:CE22231
Y51H7C.1 Aff_Y51H7C_254.B P W All gene names: Y51H7C.1; 2B757; CE22358; WBGene00021779; WP:CE22358
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, IVb male soma                                    
                                              enriched genes                                                                     

Y53H1B.2 Aff_Y53H1B.A P W All gene names: Y53H1B.2; 1L884; CE24431; WBGene00013181; WP:CE24431
Y54G2A.8 Aff_Y94H6A_151.H P W All gene names: clec-82; Y54G2A.8; 4D603; CE31655; CE37728; WBGene00021873; WP:CE31655; WP:CE37728
Y59E9AR.7 Aff_Y59E9_120.C P W All gene names: Y59E9AR.7; 4G6; WBGene00022002
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, GO categories, Reinke                            
                                              et al 2004, list of genes in cluster D, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

Y60A3A.18 Aff_Y60A3.F P W All gene names: skr-4; Y60A3.F; Y60A3A.18; 5U393; CE24523; NM_075456; WBGene00004810; WP:CE24523 WormBase description: The skr-4 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-4(RNAi) animals are at least superficially normal.
Y71H2AM.13 Aff_Y71H2_390.F P W All gene names: Y71H2AM.13; 3D824; CE22953; WBGene00022178; WP:CE22953
ZK1251.6 Aff_ZK1251.6 P W All gene names: msp-76; ZK1251.6; 4K453; NM_069321; WBGene00003463 WormBase description: msp-76 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family consists of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSPs are involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSPs assemble into fibrous networks that drive movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein (MSP1)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

ZK131.4 Aff_ZK131.1 P W All gene names: his-10; ZK131.4; 2O114; NM_064492; WBGene00001884 WormBase description: his-10 encodes an H4 histone. WormBase CDS description: histone H4
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

ZK1320.3 Aff_ZK1320.3 P W All gene names: ZK1320.3; ZK1320.3.1; ZK1320.3.2; 2J950; CE01701; WBGene00014253; WP:CE01701
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

ZK354.11 Aff_ZK354.11 P W All gene names: msp-59; ZK354.11; 4G76; NM_068377; WBGene00003452 WormBase description: msp-59 encodes a member of the major sperm protein family. WormBase CDS description: major sperm protein (MSP-59)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

ZK546.3 Aff_ZK546.3 P W All gene names: ZK546.3; 2F231; CE02917; WBGene00022760; WP:CE02917 WormBase description: Major sperm protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

ZK622.3 Aff_ZK622.3 P W All gene names: phi-40; ZK622.3; ZK622.3a.1; ZK622.3a.2; ZK622.3a.3; ZK622.3c.1; ZK622.3c.10; ZK622.3c.11; ZK622.3c.2; ZK622.3c.3; ZK622.3c.4; ZK622.3c.5; ZK622.3c.6; ZK622.3c.7; ZK622.3c.8; ZK622.3c.9; ZK622.3d.1; ZK622.3d.2; ZK622.3d.3; ZK622.3d.4; ZK622.3d.5; ZK622.3d.6; ZK622.3d.7; ZK622.3d.8; 2F570; CE29162; CE32290; CE33504; CE33505; WBGene00022781; WP:CE29162; WP:CE32290; WP:CE33504; WP:CE33505
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

ZK666.7 Aff_ZK666.7 P W All gene names: clec-61; ZK666.7; 2K780; CE02392; WBGene00014047; WP:CE02392 WormBase description: Lectin C-type domain short and long forms, von Willebrand factor type A domain
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol