Hill et al 2000, developmentally modulated cluster, 126 genes

Gene list file name:Hill2000_T1_cluster5-5.txt
Type of gene identifier:Affymetrix custom chip
Description:Hill et al 2000, Supplymental Dataset, developmentally modulated genes cluster(5,5)  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AFF_E02C12.4 Aff_E02C12.4 P W
AFF_M02G9.1_3 Aff_M02G9.1_3 P W
AFF_R02F2.2 Aff_R02F2.2 P W
AFF_R05D8.A Aff_R05D8.A P W
B0303.2 Aff_B0303.2 P W All gene names: B0303.2; 3J775; CE00536; WBGene00015124; WP:CE00536
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

B0353.1 Aff_B0353.1 P W All gene names: B0353.1; 3B193; CE27571; WBGene00015155; WP:CE27571
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C02D5.2 Aff_C02D5.2 P W All gene names: C02D5.2; 3J647; CE00034; CE39554; WBGene00015336; WP:CE00034; WP:CE39554
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster B, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C02E7.6 Aff_C02E7.6 P W All gene names: C02E7.6; 5F397; CE07843; WBGene00015339; WP:CE07843
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 Climbing, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C02H6.2 Aff_C02H6.2 P W All gene names: fbxa-105; C02H6.2; 5H870; CE07858; WBGene00015362; WP:CE07858 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C04D8.1 Aff_C04D8.1 P W All gene names: C04D8.1; 3J607; CE33028; CEGAP; WBGene00015418; WP:CE33028 WormBase description: GTPase-activating protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C06A1.5 Aff_C06A1.5 P W All gene names: C06A1.5; 2K871; CE02117; WBGene00007355; WP:CE02117 WormBase description: DNA directed RNA polymerase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C10F3.7 Aff_C10F3.6 P W All gene names: C10F3.7; 5G466; CE32581; WBGene00015679; WP:CE32581
C10H11.4 Aff_C10H11.4 P W All gene names: ugt-28; C10H11.4; 1F297; CE08093; WBGene00015693; WP:CE08093 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C13A2.9 Aff_C13A2.9 P W All gene names: C13A2.9; 5H742; CE08120; WBGene00015725; WP:CE08120
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C13B9.4 Aff_C13B9.4 P W All gene names: C13B9.4; C13B9.4a.1; C13B9.4a.2; C13B9.4b.1; C13B9.4b.2; C13B9.4c.1; C13B9.4c.2; 3H724; CE30860; CE37087; CE37088; WBGene00015735; WP:CE30860; WP:CE37087; WP:CE37088 WormBase description: C13B9.4 is orthologous to the human gene CALCITONIN RECEPTOR (CALCR; OMIM:114131), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, GO categories, ViswanathanM et al 2005  S2 daf-16                            
                                              Resveratrol, Wang et al 2003  S4 TransientList, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

C13C12.2 Aff_C13C12.2 P W All gene names: C13C12.2; 5N4; CE08133; WBGene00007552; WP:CE08133
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

C14A6.5 Aff_C14A6.5 P W All gene names: C14A6.5; 5S640; CE18496; WBGene00007569; WP:CE18496
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C14B9.1 Aff_C14B9.1 P W All gene names: hsp-12.2; C14B9.1; C14B9.1.1; C14B9.1.2; C14B9.1.3; 3J229; CE00072; NM_066375; WBGene00002011; WP:CE00072 WormBase description: hsp-12.2 is orthologous to the human gene CRYSTALLIN, ALPHA B (CRYAB; OMIM:123590), which when mutated leads to disease. WormBase CDS description: Alpha-B-crystallin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 Climbing, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C14C11.8 Aff_C14C11.8 P W All gene names: pqn-13; C14C11.8; 5G150; CE36269; NM_072093; WBGene00004104; WP:CE36269 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C15A11.4 Aff_C15A11.4 P W All gene names: C15A11.4; 1H974; CE08172; WBGene00007598; WP:CE08172 WormBase description: amine oxidase
C16D9.4 Aff_C16D9.4 P W All gene names: C16D9.4; 5I720; CE06840; WBGene00015859; WP:CE06840
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

C17G1.7 Aff_C17G1.7 P W All gene names: C17G1.7; C17G1.7.1; C17G1.7.2; CE39223; WBGene00007653; WP:CE39223; XK572 WormBase description: cysteine synthase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C17H1.7 Aff_C17H1.7 P W All gene names: C17H1.7; 1N722; CE15629; WBGene00007660; WP:CE15629
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C29E4.5 Aff_C29E4.5 P W All gene names: tag-250; C29E4.5; 3J8; CE29682; CE38589; WBGene00016203; WP:CE29682; WP:CE38589
C34E10.1 Aff_C34E10.1 P W All gene names: gop-3; C34E10.1; C34E10.1.1; C34E10.1.2; C34E10.1.3; 3G351; CE26880; NM_065718; WBGene00001662; WP:CE26880 WormBase description: gop-3 encodes an ortholog of the mammalian CGI-51 (comparative gene identification-51) proteins that display a high degree of similarity to the Haemophilus influenza D15 protective surface antigen; loss of gop-3 activity via large-scale RNAi screens indicates that GOP-3 is required for embryonic and larval development, as well as for normal postembryonic growth rates.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

C37A5.9 Aff_C37A5.10 P W All gene names: pry-1; C37A5.9; 1O766; CE30125; NM_061073; WBGene00004202; WP:CE30125
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

C37E2.5 Aff_C37E2.5 P W All gene names: ceh-37; C37E2.5; CE08624; NM_077965; WBGene00000458; WP:CE08624; XO816 WormBase description: ceh-37 encodes one of three C. elegans proteins with an OTX-like homeodomain; however, CEH-37 lacks other domains found in OTX proteins, and the CEH-37 homeodomain is predicted to resemble the Myb domain of telomere-binding proteins; CEH-37 binds the telomeric sequence 'TTAGGC' if it is repeated at least 1.5 times, and is mainly localized to the telomere in vivo; ceh-37 mutants have a weak increase in chromosomal nondisjunction; CEH-37 is involved in specifying some aspects of the AWB olfactory neuron fate, such as expression of an AWB-specific odorant receptor and a LIM-class homeodomain protein, LIM-4; CEH-37 is expressed broadly in the early embryo, while in larvae and adults it is expressed solely in the excretory cell. WormBase CDS description: Homeobox domain
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C42D8.8 Aff_C42D8.8 P W All gene names: apl-1; uvt-4; C42D8.8; C42D8.8b.1; C42D8.8b.2; C42D8.8b.3; CE04209; CE27845; NM_076469; WBGene00000149; WP:CE04209; WP:CE27845; XF732 WormBase description: apl-1 is orthologous to human AMYLOID BETA A4 PRECURSOR PROTEIN (APP; OMIM:104760), which when mutated leads to familial Alzheimer disease or cerebroarterial amyloidosis; APL-1 contains a copper-binding domain and is required for progession past the L1 larval stage, presumably because it is also required for pharyngeal pumping; apl-1 genetically interacts with feh-1 to affect pharyngeal pumping, and interacts with the PTB2 domain of FEH-1 in vitro.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C43E11.9 Aff_C43E11.9 P W All gene names: C43E11.9; C43E11.9.1; C43E11.9.2; 1E836; CE08687; WBGene00016607; WP:CE08687
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, Wang et al 2003  S4 Early genes,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

C46H11.8 Aff_C46H11.8 P W All gene names: phat-1; C46H11.8; 1F612; CE34274; WBGene00016732; WP:CE34274
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order                                                                      

C46H11.9 Aff_C46H11.9 P W All gene names: phat-2; C46H11.9; 1F614; CE08791; WBGene00016733; WP:CE08791
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

C48E7.1 Aff_C48E7.1 P W All gene names: C48E7.1; 1G839; CE08816; WBGene00016749; WP:CE08816
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C49A1.10 Aff_C49A1.10 P W All gene names: C49A1.10; 1O834; CE39236; WBGene00008191; WP:CE39236
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C51E3.2 Aff_C51E3.2 P W All gene names: srsx-27; C51E3.2; 5K627; CE33986; NM_073208; WBGene00008248; WP:CE33986 WormBase description: opoid receptor
C56A3.7 Aff_C56A3.7 P W All gene names: cav-2; C56A3.7; 5O39; CE15738; NM_073956; WBGene00000302; WP:CE15738 WormBase description: cav-2 encodes one of two C. elegans proteins related to caveolins, integral transmembrane proteins that are believed to function in regulation of signal transduction and that are the major component of caveolae, specialized lipid rafts found in the plasma membrane of most cell types; as loss of cav-2 function via large-scale RNA-mediated interference (RNAi) screens does not result in any obvious abnormalities, the role of cav-2 in C. elegans development and/or behavior is not yet known; cav-2 mRNA is expressed in eggs and mixed stage populations. WormBase CDS description: Caveolin
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S4 Climbing, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

CD4.1 Aff_CD4.1 P W All gene names: CD4.1; 5G89; CE16949; WBGene00016988; WP:CE16949
CD4.3 Aff_CD4.3 P W All gene names: CD4.3; CD4.3.1; CD4.3.2; 5G73; CE16951; WBGene00016989; WP:CE16951
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

D1007.13 Aff_D1007.13 P W All gene names: D1007.13; 1F135; CE09048; WBGene00017009; WP:CE09048
D1044.1 Aff_D1044.1 P W All gene names: D1044.1; 3G635; CE39140; WBGene00017027; WP:CE39140
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

D2007.2 Aff_D2007.2 P W All gene names: D2007.2; 3J241; CE00127; WBGene00017042; WP:CE00127 WormBase description: D2007.2 is orthologous to the human gene TRANSKETOLASE (WERNICKE-KORSAKOFF SYNDROME) (TNF; OMIM:606781), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S5 genes common to                               
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA, Zhang et al 2002, T1 mec-3 dependent genes,                                 
                                              Zhang et al. 2002, Fig2b overexpressed in mec-3MT                                  

EGAP5.1 Aff_EGAP5.1 P W All gene names: EGAP5.1; CE04326; WBGene00017150; WP:CE04326; XF781
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F07B10.1 Aff_F07B10.1 P W All gene names: cln-3.1; F07B10.1; 5L744; CE09198; NM_073458; WBGene00000539; WP:CE09198 WormBase description: cln-3.1 encodes a predicted transmembrane protein that comprises one of three C. elegans homologs of human CLN3, (OMIM:607042, mutations are associated with Batten disease (also known as juvenile neuronal ceroid lipofuscinosis), a recessively inherited childhood neurodegenerative lysosomal storage disease); as loss of cln-3.1 activity via deletion mutation results in no obvious abnormalities, the precise role of cln-3.1 in C. elegans development and/or behavior is not yet known. WormBase CDS description: Human CLN3 protein like
F07C3.9 Aff_F07C3.9 P W All gene names: F07C3.9; 5J734; CE07030; WBGene00017197; WP:CE07030
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, IVb male soma enriched                                  
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S8 SAGE genes in the dauer exit                                           

F07G11.4 Aff_F07G11.4 P W All gene names: F07G11.4; 5H764; CE09225; WBGene00017231; WP:CE09225
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

F08B6.2 Aff_F08B6.E P W All gene names: gpc-2; F08B6.2; F08B6.2.1; F08B6.2.2; F08B6.2.3; 1H335; CE20656; NM_059534; WBGene00001682; WP:CE20656 WormBase description: gpc-2 encodes one of two C. elegans heterotrimeric G protein gamma subunits; gpc-2 is required, along with its partner GPB-1, a G protein beta subunit, for proper mitotic spindle positioning and orientation during early embryonic cell divisions; to date, GPC-2 expression has been reported in electrically excitable cells (all neurons and muscles).
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F09B9.2 Aff_F09B9.2 P W All gene names: unc-115; F09B9.2; CE02176; CE15759; NM_077301; WBGene00006839; WP:CE02176; WP:CE15759; XK771 WormBase description: unc-115 encodes a protein that binds actin filaments and that is required for RAS signalling and UNC-40/netrin activity during axon pathfinding. WormBase CDS description: LIM domains
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F09F7.1 Aff_F09F7.1 P W All gene names: F09F7.1; 3G663; CE29258; WBGene00017299; WP:CE29258
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, IVb male soma enriched                                  
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S8 SAGE genes in                               
                                              the dauer exit, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

F12F6.6 Aff_F12F6.6 P W All gene names: sec-24.1; F12F6.6; 4M328; CE05594; NM_069777; WBGene00004755; WP:CE05594 WormBase description: sec-24.1 encodes one of two C. elegans Sec24 homologs; in Saccharomyces cerevisiae, Sec24 is a member of the Sec24-Sec23 subunit of the COPII coat complex, assembly of which is essential for the first step of secretory protein transport from the endoplasmic reticulum (ER) to the Golgi; by homology with Sec24, SEC-24.1 is predicted to facilitate vesicle cargo selection, and likely contains multiple, independent sites for binding to secreted proteins; loss of sec-24.1 activity via RNAi indicates that SEC-24.1 is required for cuticle secretion and oogenesis. WormBase CDS description: Yeast hypothetical YIK9 protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F13G11.1 Aff_F13G11.1 P W All gene names: tag-193; F13G11.1; F13G11.1b.1; F13G11.1b.2; F13G11.1b.3; 4P387; CE17661; CE20684; WBGene00007058; WBGene00008771; WP:CE17661; WP:CE20684
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S7 SAGE genes in the                                   
                                              dataset                                                                            

F13H6.1 Aff_F13H6.1 P W All gene names: F13H6.1; 5G841; CE30755; WBGene00017430; WP:CE30755 WormBase description: zinc-finger protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster B, Wang et al 2003  S4 TransientList, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

F17A9.3 Aff_F17A9.3 P W All gene names: F17A9.3; 5G587; CE19799; WBGene00017535; WP:CE19799 WormBase description: BZIP transcription factor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Wang et al 2003                             
                                              S5 genes common to feeding ANOVA, Wang et al 2003  S3                              
                                              genes pass one-way ANOVA                                                           

F28D1.9 Aff_F28D1.9 P W All gene names: F28D1.9; 4N158; CE39728; CEFATPA; WBGene00009218; WP:CE39728 WormBase description: fatty acid transport protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 LateList, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

F29G9.6 Aff_F29G9.6 P W All gene names: dhs-17; F29G9.6; 5G508; CE27376; NM_072160; WBGene00000980; WP:CE27376 WormBase description: dhs-17 encodes a member of the short-chain dehydrogenases/reductases family (SDR).
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

F30F8.5 Aff_F30F8.5 P W All gene names: F30F8.5; 1I424; CE37511; WBGene00009274; WP:CE37511
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F30H5.3 Aff_F30H5.3 P W All gene names: F30H5.3; 3B124; CE01927; WBGene00017937; WP:CE01927 WormBase description: Serine protease inhibitor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

F31E3.2 Aff_F31E3.2 P W All gene names: F31E3.2; CE29301; CE30773; CE30774; WBGene00017950; WP:CE29301; WP:CE30773; WP:CE30774 WormBase description: Protein kinase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F32B4.5 Aff_F32B4.5 P W All gene names: F32B4.5; 1M110; CE17745; WBGene00009315; WP:CE17745
F32D8.7 Aff_F32D8.7 P W All gene names: F32D8.7; 5L379; CE05786; WBGene00009331; WP:CE05786 WormBase description: Kunitz/Bovine pancreatic trypsin inhibitor domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

F39B2.8 Aff_Y105E8A.VV P W All gene names: F39B2.8; CE30529; WBGene00009558; WP:CE30529
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F40F9.3 Aff_F40F9.3 P W All gene names: F40F9.3; 5K195; CE05852; WBGene00009581; WP:CE05852 WormBase description: PDZ domain (Also known as DHR or GLGF).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F44A2.5 Aff_F44A2.5 P W All gene names: F44A2.5; F44A2.5a.1; F44A2.5a.2; 5J781; CE33088; CE33089; WBGene00018405; WP:CE33088; WP:CE33089
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

F44C8.7 Aff_F44C8.7 P W All gene names: F44C8.7; 5C695; CE30797; WBGene00018414; WP:CE30797
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b                                       
                                              Transporters                                                                       

F47D12.1 Aff_F47D12.1 P W All gene names: gar-2; F47D12.1; F47D12.1b.1; F47D12.1b.2; 3H409; CE01946; CE24987; CE30134; CE30135; CE32893; WBGene00001518; WP:CE01946; WP:CE24987; WP:CE30134; WP:CE30135; WP:CE32893 WormBase description: G-protein-linked acetylcholine receptor GAR-2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F49A5.5 Aff_F49A5.5 P W All gene names: clec-28; F49A5.5; 5R343; CE35549; CE38363; WBGene00009857; WP:CE35549; WP:CE38363 WormBase description: Lectin C-type domain short and long forms (2 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

F49E10.2 Aff_F49E10.2 P W All gene names: F49E10.2; CE07263; CE29384; WBGene00018640; WP:CE07263; WP:CE29384; XG513
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

F53F4.7 Aff_F53F4.7 P W All gene names: F53F4.7; 5O94; CE10966; WBGene00009990; WP:CE10966
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F55C10.1 Aff_F55C10.1 P W All gene names: cnb-1; F55C10.1; 5L857; CE32679; NM_073484; WBGene00000554; WP:CE32679 WormBase description: cnb-1 encodes an ortholog of calcineurin B, the regulatory subunit of the protein phosphatase 2B with four EF-hand motifs for calcium binding, that binds TAX-6 (a calcineurin A ortholog) in a calcium-dependent manner; CNB-1 binds calcium, enhances the phosphatase activity of TAX-6 in vitro, promotes transcription of rcn-1, and is required for normal cuticle formation, sperm morphology, and brood size. WormBase CDS description: calcineurin B
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F56C11.6 Aff_F56C11.6 P W All gene names: F56C11.6; 1A647; CE17905; CE33402; WBGene00018958; WP:CE17905; WP:CE33402 WormBase description: carboxylesterases
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, wt herm vs wt herm                            
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster D, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F57B10.1 Aff_F57B10.1 P W All gene names: F57B10.1; F57B10.1.1; F57B10.1.2; 1H161; CE37244; WBGene00019000; WP:CE37244
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

H17B01.1 Aff_Y51H7B_4.B P W All gene names: H17B01.1; 2B799; CE27184; CE27185; WBGene00019207; WP:CE27184; WP:CE27185 WormBase description: sugar transporter
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

K01B6.1 Aff_K01B6.1 P W All gene names: fozi-1; K01B6.1; 3K385; CE00238; NM_066646; WBGene00010453; WP:CE00238 WormBase description: K01B6.1 encodes a protein with a zinc-finger domain, a formin homology 2 domain, and a glutamine/asparagine-rich domain; it is dispensable, in RNAi assays, for viability and gross anatomy. WormBase CDS description: Zinc-finger motif C2H2 type
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

K01D12.5 Aff_K01D12.5 P W All gene names: K01D12.5; 5M879; CE34198; WBGene00010464; WP:CE34198
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

K02B12.3 Aff_K02B12.3 P W All gene names: phi-15; K02B12.3; K02B12.3.1; K02B12.3.2; 1J86; CE32461; WBGene00010496; WP:CE32461 WormBase description: WD domain, G-beta repeat
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

K03B8.6 Aff_K03B8.6 P W All gene names: K03B8.6; K03B8.6.1; K03B8.6.2; 5L885; CE31967; WBGene00010524; WP:CE31967
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, herm soma enriched genes,                            
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

K04A8.6 Aff_F46E10.A P W All gene names: F46E10.A; K04A8.6; 5H14; CE27388; WBGene00019377; WP:CE27388 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster B, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

K05C4.11 Aff_K05C4.11 P W All gene names: K05C4.11; 1P314; CE19979; WBGene00010587; WP:CE19979 WormBase description: CUB domain (2 domains), Low-density lipoprotein receptor domain class A
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

K07D4.7 Aff_Y14H12A_90.C P W All gene names: tag-218; K07D4.7; 2E305; CE19531; CE25936; WBGene00019487; WP:CE19531; WP:CE25936
K08D9.2 Aff_K08D9.2 P W All gene names: K08D9.2; 5D707; CE19982; WBGene00019524; WP:CE19982
K08F8.2 Aff_K08F8.2 P W All gene names: atf-2; K08F8.2; 2J43; CE03468; NM_063460; WBGene00000220; WP:CE03468 WormBase description: transcription factor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol                                                                        

K10D3.2 Aff_K10D3.2 P W All gene names: unc-14; K10D3.2; 1H700; CE25055; NM_059617; WBGene00006753; WP:CE25055 WormBase description: The unc-14 gene encodes an activity required for both axonogenesis and sex myoblast migration.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Roy et al 2002  S3 muscle genes                                             

K11C4.5 Aff_K11C4.5 P W All gene names: kra-1; ryr-1; unc-68; K11C4.5; 5H382; CE12116; NM_072352; WBGene00006801; WP:CE12116 WormBase description: unc-68 encodes a ryanodine receptor ortholog that is expressed in body-wall muscle cells and is required for normal body tension and locomotion; unc-68 mutants are flaccid, sluggish, and resistant to ryanodine, but have normal muscle ultrastructure; UNC-68 is dispensable for excitation-contraction coupling itself, but may amplify its calcium signals; the unc-68/kra-1(kh30) mutation is an S1444N substitution at a putative protein kinase C phosphorylation site; UNC-68 reduced unc-103(sy557)-induced spicule protraction by one half; unc-68 is orthologous to the human genes RYR1 (OMIM:180901, mutated in malignant hyperthermia and central core disease), RYR2 (OMIM:180902, mutated in stress-induced polymorphic ventricular tachycardia), and RYR3 (OMIM:180903). WormBase CDS description: ryanodine receptor
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

K11G9.5 Aff_K11G9.5 P W All gene names: K11G9.5; 5H166; CE30094; WBGene00019655; WP:CE30094
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

K12H4.3 Aff_K12H4.3 P W All gene names: K12H4.3; 3J135; CE00268; WBGene00019678; WP:CE00268
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, Wang et al 2003  S5 genes common                             
                                              to feeding ANOVA, Wang et al 2003  S3  genes pass                                  
                                              one-way ANOVA                                                                      

M03B6.3 Aff_M03B6.3 P W All gene names: M03B6.3; CE23873; WBGene00010835; WP:CE23873; XO480
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

M03F8.1 Aff_M03F8.1 P W All gene names: M03F8.1; 5G433; CE12372; WBGene00019761; WP:CE12372
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

R02F11.1 Aff_R02F11.1 P W All gene names: R02F11.1; 5F281; CE12496; WBGene00019839; WP:CE12496
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

R107.6 Aff_R107.6 P W All gene names: cls-2; R107.6; R107.6.1; R107.6.2; 3K147; CE37546; NM_066604; WBGene00000549; WP:CE37546 WormBase description: cls-2 encodes one of three predicted orthologs of mammalian CLASPs and of Drosophila ORBIT/MAST, microtubule-binding proteins required for fibroblast polarization and mitosis; cls-2 is required in mass RNAi assays for embryonic development and normal mitotic spindles; it has been claimed that, in an RNAi screen of potential microtubule tip-binding proteins, only cls-2(RNAi) yielded embryonic lethality and meiotic defects.
R12A1.3 Aff_R12A1.3 P W All gene names: R12A1.3; 5B902; CE35604; WBGene00020017; WP:CE35604 WormBase description: protease inhibitor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

R13H4.3 Aff_R13H4.3 P W All gene names: R13H4.3; 5M313; CE12804; WBGene00011262; WP:CE12804 WormBase description: histidine acid phosphatase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Murphy et al 2003  Fig2 Class2 shorten                                     
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, list of genes in cluster C,                                
                                              Reinke et al 2004, herm soma enriched genes, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              daf-16 Resveratrol                                                                 

R74.2 Aff_R74.2 P W All gene names: R74.2; 3F279; CE23931; WBGene00011278; WP:CE23931
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

T06D8.3 Aff_T06D8.3 P W All gene names: T06D8.3; 2L515; CE02324; WBGene00011524; WP:CE02324
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

T12A2.15 Aff_T12A2.15 P W All gene names: T12A2.14; T12A2.15; 3H314; CE18255; CE30392; WBGene00020443; WP:CE18255; WP:CE30392
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

T15B12.1 Aff_T15B12.1 P W All gene names: T15B12.1; 3G387; CE01403; CE38980; WBGene00020530; WP:CE01403; WP:CE38980
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

T19A5.3 Aff_T19A5.3 P W All gene names: T19A5.3; 5J420; CE35773; CE37678; WBGene00020554; WP:CE35773; WP:CE37678
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

T19B10.3 Aff_T19B10.3 P W All gene names: T19B10.3; 5L700; CE37992; WBGene00011832; WP:CE37992 WormBase description: The T19B10.3 gene encodes an ortholog of the human gene GALACTOSIDASE, BETA 1 (GLB1), which when mutated leads to gangliosidosis type I (OMIM:230500). WormBase CDS description: beta-galactosidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

T19B10.5 Aff_T19B10.5 P W All gene names: T19B10.5; 5L717; CE39518; WBGene00011833; WP:CE39518 WormBase description: T19B10.5 encodes a protein with partial similarity to human PERIAXIN (PRX; OMIM:605725), which when mutated leads to Dejerine-Sottas neuropathy. WormBase CDS description: PDZ domain (Also known as DHR or GLGF).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

T19C3.1 Aff_T19C3.1 P W All gene names: T19C3.1; 3B226; CE30182; WBGene00020559; WP:CE30182
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

T20G5.12 Aff_T20G5.12 P W All gene names: T20G5.12; 3L291; CE13854; WBGene00011873; WP:CE13854
T22A3.2 Aff_T22A3.2 P W All gene names: hsp-12.1; T22A3.2; 1L158; CE13914; NM_060369; WBGene00011906; WP:CE13914 WormBase description: alpha crystallin B chain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster B, Wang et al 2003  S4 TransientList, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

T22E7.1 Aff_T22E7.1 P W All gene names: T22E7.1; 1G349; CE31368; CE33189; WBGene00020693; WP:CE31368; WP:CE33189
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 Early genes, Wang et al 2003  S3  genes pass one-way                            
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

T23F11.3 Aff_T23F11.3 P W All gene names: cdka-1; T23F11.3; T23F11.3.1; T23F11.3.2; 3F753; CE33707; WBGene00011955; WP:CE33707
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

T26H2.8 Aff_T26H2.8 P W All gene names: srr-2; T26H2.8; 5T686; CE16493; NM_075334; WBGene00005653; WP:CE16493
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S4 TransientList,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

W01A8.6 Aff_W01A8.6 P W All gene names: W01A8.6; 1H648; CE06536; WBGene00012168; WP:CE06536 WormBase description: carboxypeptidase b like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

W05B5.3 Aff_W05B5.3 P W All gene names: nhr-85; W05B5.3; W05B5.3b.1; W05B5.3b.2; Y26D4A.A; 1N646; CE20150; CE26023; WBGene00003675; WP:CE20150; WP:CE26023 WormBase description: nhr-85 encodes a nuclear receptor of the NR1 subfamily that is orthologous to the insect E75 nuclear receptors that regulate molting and metamorphosis, and human NR1D1, which is involved in mammalian circadian rhythms; by homology, NHR-85 likely functions as a transcription factor that,based upon RNAi experiments, is required for development of the egg-laying system and formation of SDS-resistant dauer larvae; an nhr-85 reporter fusion is expressed in the hypodermis, the excretory and rectal epithelia, and the vulva; nhr-85 mRNA is expressed in an oscillating manner throughout larval development, in a pattern that is slightly irregular with respect to the timing of larval molts.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

Y105E8A.20 Aff_Y105E8A.F P W All gene names: Y105E8A.20; Y105E8A.20.1; Y105E8A.20.2; 1P80; CE34219; NM_170952; WBGene00013678; WP:CE34219
Y111B2A.20 Aff_Y111B2A.AA P W All gene names: Y111B2A.20; Y111B2E.B; 3N803; CE24129; WBGene00013740; WP:CE24129
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

Y18D10A.13 Aff_Y18D10A.N P W All gene names: pad-1; Y18D10A.13; 1N493; CE27468; NM_060851; WBGene00003905; WP:CE27468 WormBase description: The pad-1 gene encodes a highly conserved, but unfamiliar, protein that is required for embryonic development.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

Y34D9B.1 Aff_Y34D9B.A P W All gene names: cfz-1; mig-1; Y34D9B.1; 1B422; CE24203; CE24204; CNT1; NM_058395; WBGene00003238; WP:CE24203; WP:CE24204; frizzled 1 WormBase description: mig-1 encodes one of four C. elegans Frizzled-like receptors; mig-1 was initially identified in screens for animals with defective cell migrations, and its activity is required for proper migration of the QL neuroblast and the HSN neurons.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

Y37A1B.7 Aff_Y37A1B.7 P W All gene names: Y37A1B.7; 4O808; CE19077; WBGene00012540; WP:CE19077
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

Y37D8A.16 Aff_Y37D8A.16 P W All gene names: Y37D8A.16; 3O6; CE20220; WBGene00012554; WP:CE20220
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

Y38F1A.3 Aff_Y38F1A.E P W All gene names: ptr-18; Y38F1A.3; 2N267; CE36233; NM_064360; WBGene00004232; WP:CE36233
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

Y39A1C.1 Aff_Y39A1C.1 P W All gene names: Y39A1C.1; 3L943; CE19146; WBGene00012662; WP:CE19146
Y39B6A.19 Aff_Y39B6.F P W All gene names: twk-46; Y39B6A.19; Y39B6B.F; 5T541; CE29861; NM_171588; WBGene00006696; WP:CE29861
Y39D8A.1 Aff_Y39D8A.1 P W All gene names: Y39D8A.1; 5A899; CE20233; CE31107; CE31108; CE31109; WBGene00021448; WP:CE20233; WP:CE31107; WP:CE31108; WP:CE31109
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

Y41C4A.12 Aff_Y41C4A.12 P W All gene names: Y41C4A.12; 3M814; CE20252; CE32523; WBGene00012758; WP:CE20252; WP:CE32523
Y41D4B.18 Aff_Y41D4B_7946.A P W All gene names: Y41D4B.18; 4C323; CE21857; WBGene00021520; WP:CE21857
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

Y48G1A.3 Aff_Y48G1A_54.E P W All gene names: Y48G1A.3; 1A809; CE26999; WBGene00021659; WP:CE26999
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

Y53C10A.4 Aff_Y53C10A.A P W All gene names: rga-2; Y53C10A.4; 1M577; CE22372; NM_060634; WBGene00013135; WP:CE22372 WormBase description: RhoGAP domain
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

Y60A3A.23 Aff_Y60A3.Z P W All gene names: Y60A3A.23; 5U479; CE35127; WBGene00013367; WP:CE35127
Y67D8C.5 Aff_Y94H6A_136.A P W All gene names: Y67D8C.5; 4D798; CE31665; WBGene00022069; WP:CE31665
ZC123.1 Aff_ZC123.1 P W All gene names: ZC123.1; 1B313; CE28152; WBGene00022517; WP:CE28152
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

ZC443.1 Aff_ZC443.1 P W All gene names: ZC443.1; 5N288; CE27788; WBGene00013896; WP:CE27788 WormBase description: aldose reductase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

ZK112.2 Aff_ZK112.2 P W All gene names: ncl-1; ZK112.2; 3I827; CE00373; NM_066283; WBGene00003559; WP:CE00373 WormBase description: ncl-1 encodes a B-box zinc finger protein that may be a repressor of RNA polymerase I and III transcription and an inhibitor of cell growth, based on mutant analysis; appears to function in a cell autonomous fashion. WormBase CDS description: xnf7
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

ZK20.6 Aff_ZK20.6 P W All gene names: nep-1; ZK20.6; ZK20.6.1; ZK20.6.2; 2L946; CE39118; NM_064089; WBGene00013926; WP:CE39118 WormBase description: ZK20.6 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; ZK20.6 is closely paralogous to F18A12.8, and orthologous to CG9761 in Drosophila melanogaster; more generally, ZK20.6 falls into a group of proteins that includes the classical neprilysins found in mammals (e.g., PEX [OMIM:307800] and the enkephalin cleaving enzymes). WormBase CDS description: neprilysin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

ZK652.8 Aff_ZK652.8 P W All gene names: ZK652.8; 3I930; CE29164; WBGene00022786; WP:CE29164
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 Early genes, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

ZK792.6 Aff_ZK792.6 P W All gene names: let-60; lin-34; ZK792.6; 4M454; CE03827; NM_069812; WBGene00002335; WP:CE03827 WormBase description: The let-60 gene encodes a member of the GTP-binding RAS protooncogene family that affects viability, vulval development, spicule development, germ line meiotic progression, posterior development of the hypodermis, and chemotaxis; it acts genetically downstream of let-23 with respect to vulval development and upstream of the MAPK pathway with respect to chemotaxis, and is expressed in neural, muscle, and hypodermal lineages. WormBase CDS description: LET-60 RAS protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b signaling