Reinke et al 2004, list of genes in cluster A, 545 genes

Gene list file name:Reinke2004_Fig5_ClusterA.txt
Type of gene identifier:Cosmid name
Description:Reinke et al 2004, Fig5 list of genes in cluster A  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AC3.2 AC3.2 P W All gene names: ugt-49; AC3.2; 5K853; CE37871; WBGene00007070; WP:CE37871 WormBase description: UDP-glucuronosyltransferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

B0244.2 B0244.2 P W All gene names: ida-1; B0244.2; B0244.2.1; B0244.2.2; 3G855; CE31867; NM_065844; WBGene00002048; WP:CE31867; ia2 WormBase description: ida-1 encodes a protein tyrosine phosphatase-like receptor, orthologous to the mammalian type I diabetes autoantigens IA-2 and phogrin that are expressed in dense core vesicles of neuroendocrine tissue and involved in regulated protein secretion; in C. elegans, IDA-1 appears to be required for regulating presynaptic neurotransmission and in particular, for the neuropeptidergic control of egg-laying; ida-1 interacts genetically with unc-31 and unc-64, which encode proteins required for dense core vesicle fusion and exocytosis; ida-1 expression is detected in a subset of neurons in the anterior nerve ring, the ventral nerve cord, the tail, and the vulva, including the VC vulval motoneurons and the HSN egg-laying neurons; ida-1 is also detected in the vulval uv1 cells, non-neuronal cells that contain neurosecretory-like vesicles. WormBase CDS description: protein tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

B0334.1 B0334.1 P W All gene names: B0334.1; B0334.1.1; B0334.1.2; 2L776; CE02932; WBGene00007142; WP:CE02932 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

B0336.11 B0336.11 P W All gene names: B0336.11; 3G798; CE32296; CE39202; WBGene00015148; WP:CE32296; WP:CE39202
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0, Zhang et al 2002, T1 mec-3                             
                                              dependent genes                                                                    

B0412.2 B0412.2 P W All gene names: daf-7; B0412.2; 3B431; CE01758; NM_064864; WBGene00000903; WP:CE01758 WormBase description: daf-7 encodes a member of the transforming growth factor beta superfamily that affects dauer larvae formation in a TGF-beta-mediated pathway and also affects egg laying; expressed in the ASI neurons. WormBase CDS description: transforming growth factor beta proteins
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T2 lifespan and                                 
                                              Dauer, Reinke et al 2004, list of genes in cluster A,                              
                                              Reinke et al 2004, list of genes in cluster order                                  

B0495.10 B0495.10 P W All gene names: tag-178; B0495.10; 2I2; CE01760; CE32105; CE33266; WBGene00007044; WBGene00015209; WP:CE01760; WP:CE32105; WP:CE33266
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

B0511.1 B0511.1 P W All gene names: fkb-7; B0511.1; 1L245; CE26851; NM_060391; WBGene00001432; WP:CE26851 WormBase description: fkb-7 encodes a peptidylprolyl cis/trans isomerase homologous to mammalian FK506-binding proteins; by homology, FKB-7 could function in a number of different processes including protein folding, signal transduction, and regulation of muscle contraction; however, as loss of fkb-7 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of FKB-7 in C. elegans development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

B0513.7 B0513.7 P W All gene names: B0513.7; 4O598; WBGene00007199
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, fem3 enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol                                                                 

B0546.4 B0546.4 P W All gene names: B0546.4; 4E148; CE16795; CE33354; WBGene00015251; WP:CE16795; WP:CE33354
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15,                                   
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order, Romagnolo                              
                                              et al 2002  Fig3b Unkown, Romagnolo et al 2002 Fig5                                
                                              genes in let-60 timecour, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

B0564.6 B0564.6 P W All gene names: B0564.6; 4N895; CE05180; CE05182; WBGene00007206; WP:CE05180; WP:CE05182 WormBase description: Leucine Rich Repeat (2 copies) (2 domains)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S7 SAGE genes in the dataset, Wang et al 2003                             
                                              S5 genes common to feeding ANOVA, Wang et al 2003  S3                              
                                              genes pass one-way ANOVA, Wang et al 2003  S8 SAGE                                 
                                              genes in the dauer exit                                                            

BE10.4 BE10.4 P W All gene names: BE10.4; 3N905; CE15567; WBGene00007212; WP:CE15567
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C01A2.2 C01A2.2 P W All gene names: C01A2.2; 1N989; CE07784; WBGene00007214; WP:CE07784
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C01A2.4 C01A2.4 P W All gene names: C01A2.4; 1N983; CE34247; WBGene00007216; WP:CE34247
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C01C10.1 C01C10.1 P W All gene names: clc-2; C01C10.1; CE28881; WBGene00000523; WP:CE28881; XI51 WormBase description: clc-2 encodes a claudin homolog, closely similar to CLC-1, that is required for normal cohesion of apical junctions in epithelia; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water; CLC-2 maintains the impermeability ('barrier function') of epithelia, since clc-1(RNAi) animals have abnormal permeability of the hypodermis to dyes; clc-2 is expressed in hypodermal seam cells, with two diffuse lines of CLC-2 protein.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

C02F12.7 C02F12.7 P W All gene names: tag-278; C02F12.7; CE03901; WBGene00015356; WP:CE03901; XE304
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C02F4.4 C02F4.4 P W All gene names: C02F4.4; 4L278; CE07855; WBGene00007264; WP:CE07855
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

C02F5.7 C02F5.7 P W All gene names: C02F5.7; C02F5.7a.1; C02F5.7a.2; C02F5.7a.3; C02F5.7a.4; C02F5.7b.1; C02F5.7b.2; C30A5.1; CE24780; CE30418; NM_171210; NM_171211; WBGene00015350; WP:CE24780; WP:CE30418 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

C03C10.6 C03C10.6 P W All gene names: C03C10.6; CE30720; NM_065416; WBGene00007272; WP:CE30720
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

C04E12.4 C04E12.4 P W All gene names: C04E12.4; CE30721; WBGene00015434; WP:CE30721
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C04E12.6 C04E12.6 P W All gene names: C04E12.6; 5D834; CE16819; WBGene00015436; WP:CE16819
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S6 removed genes of contamination                                         

C04E12.7 C04E12.7 P W All gene names: C04E12.7; 5D836; CE16820; WBGene00015437; WP:CE16820 WormBase description: C04E12.7 encodes a homolog of human scramblase (PLSCR1; OMIM:604170), which is activated by a rise of intracellular calcium, and which promotes the exposure of phosphatidylserine on the surface of cells undergoing activation, injury, or apoptosis; closely related paralogs of C04E12.7 include T22H2.5 and ZK1053.5.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C04F12.3 C04F12.3 P W All gene names: ikb-1; C04F12.3; 1K263; CE19676; NM_060174; WBGene00002069; WP:CE19676 WormBase description: ikb-1 encodes an ortholog of human BCL3 (OMIM:109560) that physically interacts with the checkpoint protein MRT-2; ikb-1(nr2019) and ikb-1(nr2027) mutants display no obvious phenotype other than shortened lifespan; mutation of BCL3 is frequently associated with recurring translocations found in the neoplastic cells of patients with chronic lymphocytic leukemia, and has been implicated in cell cycle control (perhaps via apoptosis). WormBase CDS description: Ank repeat
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C05C10.4 C05C10.4 P W All gene names: C05C10.4; 2K223; CE17370; WBGene00007331; WP:CE17370 WormBase description: acid phosphatase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, McElwee et al 2003  T1 targets of                                  
                                              daf-16, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

C05C12.4 C05C12.4 P W All gene names: C05C12.4; 4M12; CE39218; WBGene00007336; WP:CE39218
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

C06A6.5 C06A6.5 P W All gene names: C06A6.5; 4I598; CE27661; WBGene00015510; WP:CE27661
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C06E7.2 C06E7.2 P W All gene names: C06E7.2; C06E7.2.1; C06E7.2.2; 4G607; CE33516; WBGene00015539; WP:CE33516
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order, Wang                            
                                              et al 2003  S8 SAGE genes in the dauer exit                                        

C06E8.5 C06E8.5 P W All gene names: C06E8.5; 3I92; CE00801; WBGene00015544; WP:CE00801 WormBase description: bacterial permeability-increasing protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order, Wang                            
                                              et al 2003  S7 SAGE genes in the dataset, Wang et al                               
                                              2003  S8 SAGE genes in the dauer exit                                              

C06G1.4 C06G1.4 P W All gene names: ain-1; C06G1.4; C06G1.4.1; C06G1.4.2; CE03967; WBGene00015547; WP:CE03967; XR231
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C07B5.4 C07B5.4 P W All gene names: C07B5.4; C07B5.4b.1; C07B5.4b.2; CE37311; CE37312; WBGene00007409; WP:CE37311; WP:CE37312; XK153
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C07D10.5 C07D10.5 P W All gene names: C07D10.5; 2H673; CE36628; WBGene00015569; WP:CE36628
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, herm soma enriched genes,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C07G3.2 C07G3.2 P W All gene names: C07G3.2; 5D999; CE07993; WBGene00015574; WP:CE07993
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C08E3.13 C08E3.13 P W All gene names: C08E3.13; 2B924; WBGene00015605
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

C09B8.1 C09B8.1 P W All gene names: ipp-5; C09B8.1; CE30857; NM_076607; WBGene00002146; WP:CE30857; XG651 WormBase description: ipp-5 encodes a type I inositol 5-phosphatase homolog; ipp-5 acts downstream of let-23 to negatively regulate IP3 signaling and is involved in spermathecal contractions during ovulation; an ipp-5::gfp transcriptional reporter is expressed in the adult distal spermatheca and weakly in the proximal sheath.
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, McCarroll et al 2004  SFig1-4 conserved                            
                                              w/ Drosoph, Reinke et al 2004, list of genes in cluster                            
                                              A, Reinke et al 2004, list of genes in cluster order                               

C09D4.2 C09D4.2 P W All gene names: C09D4.2; 1G59; CE08031; WBGene00015633; WP:CE08031
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order,                                        
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C09E8.2 C09E8.2 P W All gene names: C09E8.2; 2A845; CE19348; CE32123; WBGene00015645; WP:CE19348; WP:CE32123
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

C09F12.2 C09F12.2 P W All gene names: C09F12.2; CE31409; WBGene00007482; WP:CE31409; XL675
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 daf-16 Resveratrol                                                  

C09F5.1 C09F5.1 P W All gene names: C09F5.1; 3B279; CE29572; WBGene00015647; WP:CE29572
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C10F3.2 C10F3.2 P W All gene names: dhs-16; C10F3.2; 5G465; CE08067; NM_072153; WBGene00000979; WP:CE08067 WormBase description: dhs-16 encodes a short-chain dehydrogenase predicted to be mitochondrial. WormBase CDS description: alcohol/ribitol dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S4 genes pass two-wayANOVA P0                                                     

C10G6.1 C10G6.1 P W All gene names: C10G6.1; C10G6.1b.1; C10G6.1b.2; 4G593; CE27677; CE37193; WBGene00015680; WP:CE27677; WP:CE37193
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol                                                                        

C11H1.2 C11H1.2 P W All gene names: C11H1.2; CE31413; WBGene00007528; WP:CE31413; XO924
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C12D5.9 C12D5.9 P W All gene names: C12D5.9; 5I170; CE06811; WBGene00015710; WP:CE06811
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C13B9.1 C13B9.1 P W All gene names: C13B9.1; C13B9.1.1; C13B9.1.2; 3H719; CE32795; WBGene00015732; WP:CE32795
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen                                                                                

C13B9.4 C13B9.4 P W All gene names: C13B9.4; C13B9.4a.1; C13B9.4a.2; C13B9.4b.1; C13B9.4b.2; C13B9.4c.1; C13B9.4c.2; 3H724; CE30860; CE37087; CE37088; WBGene00015735; WP:CE30860; WP:CE37087; WP:CE37088 WormBase description: C13B9.4 is orthologous to the human gene CALCITONIN RECEPTOR (CALCR; OMIM:114131), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, GO categories, ViswanathanM et al 2005  S2 daf-16                            
                                              Resveratrol, Wang et al 2003  S4 TransientList, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

C14F11.2 C14F11.2 P W All gene names: C14F11.2; CE29578; WBGene00015779; WP:CE29578; XG828
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

C14F11.6 C14F11.6 P W All gene names: C14F11.6; CE02482; WBGene00015781; WP:CE02482; XG856 WormBase description: DTDP-4-dehydrorhamnose 3,5-epimerase (RFBC gene)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

C14H10.2 C14H10.2 P W All gene names: C14H10.2; CE23543; WBGene00007592; WP:CE23543; XK862
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C15B12.1 C15B12.1 P W All gene names: C15B12.1; CE29665; WBGene00015783; WP:CE29665; XH97 WormBase description: sarcosine oxidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

C16A11.1 C16A11.1 P W All gene names: gpa-11; C16A11.1; 2E545; CE20515; NM_062347; WBGene00001673; WP:CE20515 WormBase description: gpa-11 encodes a member of the G protein alpha subunit family of heterotrimeric GTPases; it is expressed in ADL and ASH amphid neurons. WormBase CDS description: guanine nucleotide-binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C16B8.3 C16B8.3 P W All gene names: C16B8.3; C16B8.3.1; C16B8.3.2; CE04013; WBGene00015823; WP:CE04013; XE586
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C16D9.1 C16D9.1 P W All gene names: C16D9.1; 5I741; CE27695; WBGene00015857; WP:CE27695
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

C16E9.1 C16E9.1 P W All gene names: C16E9.1; CE35403; WBGene00015865; WP:CE35403; XH561
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C16H3.3 C16H3.3 P W All gene names: C16H3.3; CE08237; CE27697; WBGene00015868; WP:CE08237; WP:CE27697; XS216
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

C17B7.2 C17B7.2 P W All gene names: C17B7.2; 5D829; CE16850; WBGene00015876; WP:CE16850
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

C17G1.7 C17G1.7 P W All gene names: C17G1.7; C17G1.7.1; C17G1.7.2; CE39223; WBGene00007653; WP:CE39223; XK572 WormBase description: cysteine synthase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C17H12.8 C17H12.8 P W All gene names: C17H12.8; 4H583; CE19360; WBGene00015933; WP:CE19360
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 Early genes,                               
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

C18D11.2 C18D11.2 P W All gene names: maa-1; C18D11.2; 3M910; CE18513; NM_067130; WBGene00007680; WP:CE18513 WormBase description: maa-1 encodes a predicted membrane-associated Acyl-CoA binding protein; loss of maa-1 activity via RNAi results in no obvious defects. WormBase CDS description: Acyl CoA binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C18E9.1 C18E9.1 P W All gene names: cal-2; C18E9.1; 2J251; CE34702; NM_063505; WBGene00000286; WP:CE34702 WormBase description: cal-2 encodes a calmodulin homolog required for embryonic development or viability; CAL-2 is closely similar to its paralogs CAL-1, CAL-3, CAL-4 and CMD-1. WormBase CDS description: calmodulin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

C18G1.2 C18G1.2 P W All gene names: C18G1.2; 5F251; CE17418; WBGene00015981; WP:CE17418 WormBase description: GATA transcription factor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C18H9.7 C18H9.7 P W All gene names: rpy-1; C18H9.7; 2G994; CE01807; NM_062964; WBGene00004507; WP:CE01807 WormBase description: rpy-1 is orthologous to the human gene 43KDA ACETYLCHOLINE RECEPTOR-ASSOCIATED PROTEIN (RAPSN; OMIM:601592), which when mutated leads to congenital myasthenic syndrome. WormBase CDS description: postsynaptic protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Lund et al 2002  Fig3B neuro-specific genes,                               
                                              Lund et al 2002  Aging time course Fig3A muscle,                                   
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order,                                        
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit, Wang et al 2003  S7                               
                                              SAGE genes in the dataset, Wang et al 2003  S4 Early                               
                                              genes, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

C23F12.4 C23F12.4 P W All gene names: C23F12.4; CE04048; WBGene00016009; WP:CE04048; XK7
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C24H10.2 C24H10.2 P W All gene names: C24H10.2; CE04067; WBGene00016068; WP:CE04067; XF683
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C25A1.11 C25A1.11 P W All gene names: aha-1; C25A1.11; 1K770; CE08377; NM_060286; WBGene00000095; WP:CE08377 WormBase description: aha-1 encodes an ortholog of human aryl-hydrocarbon receptor nuclear translocator; interacts with AHR-1 and HIF-1 in vitro, requires HIF-1 for proper localization, and is expressed ubiquitously. WormBase CDS description: aryl hydrocarbon receptor nuclear translocator
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C25F9.1 C25F9.1 P W All gene names: srw-85; C25F9.1; 5T900; CE31883; NM_075380; WBGene00005832; WP:CE31883 WormBase description: 7TM chemoreceptor, srw family
                                              
Member of lists (Publications lists):
                                              Portman et al 2004  T1 25 candidate                               
                                              ray genes, Reinke et al 2004, list of genes in cluster                             
                                              A, Reinke et al 2004, list of genes in cluster order                               

C25F9.5 C25F9.5 P W All gene names: C25F9.5; C25F9.5.1; C25F9.5.2; 5T882; CE17469; WBGene00007725; WP:CE17469
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C25F9.6 C25F9.6 P W All gene names: C25F9.6; 5T878; CE17470; WBGene00007726; WP:CE17470
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C25F9.9 C25F9.9 P W All gene names: C25F9.9; 5T891; CE17473; WBGene00007728; WP:CE17473
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

C25H3.10 C25H3.10 P W All gene names: C25H3.10; 2F988; CE27090; CE37612; WBGene00016119; WP:CE27090; WP:CE37612
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Kwon et al 2004  T1 late-repression                                        
                                              Ethanol-respon, Reinke et al 2004, list of genes in                                
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, Romagnolo et                            
                                              al 2002 Fig5 genes in let-60 timecour, ViswanathanM et                             
                                              al 2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated, Wang et al 2003  S3  genes pass                             
                                              one-way ANOVA, Wang et al 2003  S8 SAGE genes in the                               
                                              dauer exit, Wang et al 2003  S7 SAGE genes in the                                  
                                              dataset, Wang et al 2003  S4 Dauer Enriched, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

C26F1.5 C26F1.5 P W All gene names: grl-10; C26F1.5; 5I255; CE06879; NM_072604; WBGene00001719; WP:CE06879
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

C27A7.1 C27A7.1 P W All gene names: C27A7.1; 5M617; CE08403; CE39478; WBGene00007753; WP:CE08403; WP:CE39478 WormBase description: C27A7.1 is orthologous to the human gene NPPASE (ENPP1; OMIM:173335), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 TransientList, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C27B7.7 C27B7.7 P W All gene names: C27B7.7; 4J679; CE03036; WBGene00007764; WP:CE03036 WormBase description: fibronectin type-III repeats
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C27F2.5 C27F2.5 P W All gene names: C27F2.5; C27F2.5.1; C27F2.5.2; 3G50; CE26875; WBGene00016167; WP:CE26875 WormBase description: S. cerevisiae Snf8p
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C28C12.4 C28C12.4 P W All gene names: C28C12.4; 4J251; CE04111; WBGene00016180; WP:CE04111
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C28H8.6 C28H8.6 P W All gene names: tag-327; C28H8.6; 3G980; CE01828; CE37096; WBGene00016197; WP:CE01828; WP:CE37096 WormBase description: LIM domains
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C29F7.2 C29F7.2 P W All gene names: C29F7.2; CE35414; WBGene00007811; WP:CE35414; XO35
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, fem3 enriched genes                                                       

C29F9.2 C29F9.2 P W All gene names: C29F9.2; 3A339; 3A749; CE08450; WBGene00016217; WP:CE08450
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C29F9.3 C29F9.3 P W All gene names: C29F9.3; C29F9.3a.1; C29F9.3a.2; 3A743; CE28896; CE30623; CE30624; WBGene00016218; WP:CE28896; WP:CE30623; WP:CE30624
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes                                 

C30F12.7 C30F12.7 P W All gene names: C30F12.7; 1H553; CE16887; WBGene00016266; WP:CE16887 WormBase description: isocitrate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

C32B5.8 C32B5.8 P W All gene names: C32B5.8; 2B249; CE08516; WBGene00016301; WP:CE08516
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C32D5.12 C32D5.12 P W All gene names: phi-45; C32D5.12; 2G648; CE01841; WBGene00016319; WP:CE01841
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Shen et al 2005  T1 hif-1 depend hypoxia, Wang                              
                                              et al 2003  S4 Early genes, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C32D5.9 C32D5.9 P W All gene names: lgg-1; C32D5.9; C32D5.9.1; C32D5.9.2; 2G636; CE01849; NM_062876; WBGene00002980; WP:CE01849
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C32H11.11 C32H11.11 P W All gene names: C32H11.11; 4N701; WBGene00007874
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

C32H11.5 C32H11.5 P W All gene names: C32H11.5; 4N688; CE19712; WBGene00007868; WP:CE19712
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 LateList, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

C32H11.6 C32H11.6 P W All gene names: C32H11.6; 4N690; CE19713; WBGene00007869; WP:CE19713
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

C32H11.8 C32H11.8 P W All gene names: C32H11.8; 4N696; CE19715; WBGene00007871; WP:CE19715
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

C33A12.4 C33A12.4 P W All gene names: C33A12.4; 4K274; CE05350; WBGene00007883; WP:CE05350
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes                             

C33G8.4 C33G8.4 P W All gene names: C33G8.4; 5H485; CE06913; WBGene00016362; WP:CE06913
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C33H5.11 C33H5.11 P W All gene names: imp-3; C33H5.11; C33H5.11.1; C33H5.11.2; 4I552; CE29696; NM_068885; WBGene00016378; WP:CE29696
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, mixed oogenesis soma, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated                                                   

C33H5.13 C33H5.13 P W All gene names: C33H5.13; 4I556; CE04156; WBGene00016379; WP:CE04156
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C34E11.1 C34E11.1 P W All gene names: rsd-3; C34E11.1; C34E11.1.1; C34E11.1.2; CE03062; NM_077572; WBGene00004682; WP:CE03062; XM421 WormBase description: yeast hypothetical L8167.6 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C34H4.3 C34H4.3 P W All gene names: tag-244; C34H4.3; 4C315; CE27820; WBGene00016426; WBGene00044073; WP:CE27820
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order                                  

C35A11.2 C35A11.2 P W All gene names: C35A11.2; 5F861; CE35253; WBGene00016429; WP:CE35253
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, fem3 enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, Wang et al 2003  S5 genes common                             
                                              to feeding ANOVA, Wang et al 2003  S3  genes pass                                  
                                              one-way ANOVA                                                                      

C36A4.10 C36A4.10 P W All gene names: C36A4.10; 3E918; CE33979; WBGene00007970; WP:CE33979
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C36E6.5 C36E6.5 P W All gene names: mlc-2; C36E6.5; C36E6.5.1; C36E6.5.2; C36E6.B; CE20542; NM_078427; WBGene00003370; WP:CE20542; XS70
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Roy et al 2002  S2 positivecontrol L1 muscle                                

C36H8.3 C36H8.3 P W All gene names: flp-9; C36H8.3; 4N520; CE39568; NM_070035; WBGene00001452; WP:CE39568 WormBase description: flp-9 encodes a predicted FMRFamide-like peptide neurotransmitter that inhibits action potentials in the pharyngeal muscle when applied to the pharynx of dissected worms and inhibits movement when injected into A. suum; expressed at highest levels prior to adulthood.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, IVb male soma enriched genes, Wang                              
                                              et al 2003  S7 SAGE genes in the dataset, Wang et al                               
                                              2003  S8 SAGE genes in the dauer exit                                              

C39E9.3 C39E9.3 P W All gene names: col-131; C39E9.3; 4N830; CE05386; NM_070106; WBGene00000705; WP:CE05386 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

C40H1.4 C40H1.4 P W All gene names: elo-4; C40H1.4; 3K420; CE00112; NM_066655; WBGene00001242; WP:CE00112 WormBase description: The elo-4 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; its function in vivo is unknown. WormBase CDS description: Yeast hypothetical YCR34W
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, wt herm vs wt herm enriched gen, Reinke et al                             
                                              2004, fem3 enriched genes                                                          

C41D7.2 C41D7.2 P W All gene names: ptr-3; C41D7.2; 2A654; CE27582; NM_061317; WBGene00004218; WP:CE27582 WormBase description: ptr-3 encodes a member of the Patched superfamily.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 TransientList, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C41G11.1 C41G11.1 P W All gene names: C41G11.1; CE39003; CE39004; WBGene00016568; WP:CE39003; WP:CE39004; XG336
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, herm soma enriched genes                                        

C41G11.3 C41G11.3 P W All gene names: rgs-6; C41G11.3; CE30895; NM_076563; WBGene00004349; WBGene00016569; WP:CE30895; XG340 WormBase description: rgs-6 encodes a regulator of G protein signaling; by homology, RGS-6 is predicted to function as a GTPase-activating protein that binds G protein alpha subunits and negatively regulates heterotrimeric G protein signaling; loss of rgs-6 activity via RNAi or a deletion mutation results in no obvious defects, and likewise, rgs-6 overexpression has no measurable effect on egg-laying behavior, locomotion, or viability; the rgs-6 expression pattern has not yet been reported.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C44B7.5 C44B7.5 P W All gene names: C44B7.5; 2H162; CE02543; WBGene00016627; WP:CE02543
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, herm soma enriched genes,                                  
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C44C8.1 C44C8.1 P W All gene names: C44C8.1; 4B655; CE17541; WBGene00016646; WP:CE17541 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C44C8.3 C44C8.3 P W All gene names: C44C8.3; 4B649; WBGene00016648 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C44F1.3 C44F1.3 P W All gene names: lec-4; C44F1.3; 3E862; CE02163; NM_065362; WBGene00002267; WP:CE02163 WormBase description: lec-4 encodes a predicted galectin that exhibits sugar binding properties in vitro. WormBase CDS description: galactoside binding lectin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C44H4.5 C44H4.5 P W All gene names: tap-1; C44H4.5; CE08726; NM_078027; WBGene00006524; WP:CE08726; XP209 WormBase description: Protein phosphatase 2C
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C45B11.3 C45B11.3 P W All gene names: dhs-18; C45B11.3; C45B11.3.1; C45B11.3.2; 5L526; CE05427; NM_073411; WBGene00000981; WP:CE05427 WormBase description: alcohol dehydrogenase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C45G9.6 C45G9.6 P W All gene names: C45G9.6; 3G129; CE30633; CE30634; WBGene00016677; WP:CE30633; WP:CE30634
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C46C11.3 C46C11.3 P W All gene names: C46C11.3; CE04218; WBGene00016706; WP:CE04218; XF249
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 TransientList, Wang et al 2003  S3  genes                              
                                              pass one-way ANOVA, Wang et al 2003  S8 SAGE genes in                              
                                              the dauer exit, Wang et al 2003  S7 SAGE genes in the                              
                                              dataset, Wang et al 2003  S4 genes pass two-wayANOVA P0                            

C46C2.2 C46C2.2 P W All gene names: C46C2.2; C46C2.2.1; C46C2.2.2; 4J983; CE32832; WBGene00008110; WP:CE32832 WormBase description: transport protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, ViswanathanM                              
                                              et al 2005  S2 daf-16 Resveratrol                                                  

C46F4.2 C46F4.2 P W All gene names: acs-17; dod-9; C46F4.2; C46F4.2.1; C46F4.2.2; CE30907; NM_076592; WBGene00016716; WP:CE30907; XG556 WormBase description: long-chain-fatty-acid coA ligase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Murphy et al 2003  Fig2 Class1 elongate                                  
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

C46F9.1 C46F9.1 P W All gene names: math-22; C46F9.1; 2C165; CE32330; WBGene00016717; WP:CE32330
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, herm soma enriched genes, Wang et al                            
                                              2003  S7 SAGE genes in the dataset, Wang et al 2003  S8                            
                                              SAGE genes in the dauer exit                                                       

C46F9.2 C46F9.2 P W All gene names: math-23; C46F9.2; 2C163; CE08769; WBGene00016718; WP:CE08769 WormBase description: The C46F9.2 gene encodes a protein closely similar to C46F9.3, which has a meprin-associated Traf homology (MATH) domain and may be involved in apoptosis.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes                                 

C46H11.2 C46H11.2 P W All gene names: C46H11.2; 1F619; CE08784; WBGene00016728; WP:CE08784 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Murphy et al 2003  Fig2 Class1 elongate lifespan,                                  
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order,                                        
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Climbing, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

C49A9.5 C49A9.5 P W All gene names: C49A9.5; 4G979; CE16935; WBGene00016759; WP:CE16935
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, herm soma enriched genes, Wang et al                            
                                              2003  S4 Early genes, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C50C3.9 C50C3.9 P W All gene names: unc-36; unc-72; C50C3.9; 3J284; CE32168; CE39702; NM_066388; WBGene00006772; WP:CE32168; WP:CE39702; eT1
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Roy et al 2002  S3 muscle genes,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C50D2.1 C50D2.1 P W All gene names: C50D2.1; 2A403; CE27874; WBGene00016805; WP:CE27874
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

C50F4.1 C50F4.1 P W All gene names: C50F4.1; 5K9; CE26799; WBGene00008229; WP:CE26799
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Reinke et al 2004, list of genes in                                
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, herm soma enriched genes,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C50F4.8 C50F4.8 P W All gene names: C50F4.8; C50F4.8.1; C50F4.8.2; 5J998; CE05472; WBGene00008233; WP:CE05472
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Reinke et al 2004, list of genes in                                
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 TransientList, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C50F7.10 C50F7.10 P W All gene names: C50F7.10; 4I512; CE04248; WBGene00016848; WP:CE04248 WormBase description: glycosyl hydrolase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C53B7.2 C53B7.2 P W All gene names: C53B7.2; CE06972; WBGene00016893; WP:CE06972; XH465
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, fem3 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, herm soma                            
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C54A12.1 C54A12.1 P W All gene names: ptr-6; C54A12.1; 2F534; CE39341; NM_062585; WBGene00004221; WBGene00016908; WP:CE39341
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 LateList, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

C54D10.10 C54D10.10 P W All gene names: C54D10.10; 5M926; CE05506; WBGene00008304; WP:CE05506 WormBase description: serine protease inhibitor
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit, Wang et al 2003  S7                               
                                              SAGE genes in the dataset, Wang et al 2003  S4 genes                               
                                              pass two-wayANOVA P0, Wang et al 2003  S4 Dauer                                    
                                              Enriched                                                                           

C54D10.3 C54D10.3 P W All gene names: C54D10.3; C54D10.3.1; C54D10.3.2; 5M899; CE05499; WBGene00008298; WP:CE05499
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C54F6.13 C54F6.13 P W All gene names: nhx-3; C54F6.13; 5I16; CE08985; CE32044; NM_072542; WBGene00003731; WP:CE08985; WP:CE32044 WormBase description: nhx-3 encodes a sodium/proton exchanger expressed intracellularly (in elliptical, randomly distributed dots that might be multivesicular or Ward bodies) within hypodermal cells of the main body syncytium, socket cells, and the excretory pore cell, as well as (in adults) within uterine cells (probably ut1) in the region closest to the vulva, in spermathecal junction cells; nhx-3 has no obvious phenotype in mass RNAi screens; NHX-3 is thought to prevent intracellular acidification by catalysing the electroneutral exchange of vesicular sodium for an intracellular proton; speculatively, NHX-3 might enable hypodermis-specific secretion of cuticle or phagocytosis.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C54G4.1 C54G4.1 P W All gene names: rskn-2; C54G4.1; 1I597; CE32338; NM_059803; WBGene00008311; WP:CE32338 WormBase description: Protein kinase C terminal domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C54G7.2 C54G7.2 P W All gene names: C54G7.2; C54G7.2.1; C54G7.2.2; CE04270; WBGene00016934; WP:CE04270; XG140
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C55F2.2 C55F2.2 P W All gene names: C55F2.2; 4I660; CE31458; WBGene00016958; WP:CE31458
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C56A3.2 C56A3.2 P W All gene names: C56A3.2; C56A3.2.1; C56A3.2.2; 5O10; CE09030; WBGene00008341; WP:CE09030 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

CTEL54X.1 cTel54X.1 P W All gene names: fbxa-6; CTEL54X.1; 3A620; CE20619; WBGene00008352; WP:CE20619 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
D1014.3 D1014.3 P W All gene names: phi-29; D1014.3; D1014.3.1; D1014.3.2; 5I613; CE38494; WBGene00017016; WP:CE38494 WormBase description: alpha-SNAP protein
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

D1014.5 D1014.5 P W All gene names: D1014.5; 5I605; CE07007; WBGene00017018; WP:CE07007
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S5 genes common to feeding                                 
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

D1081.2 D1081.2 P W All gene names: unc-120; D1081.2; 1J37; CE05534; NM_059895; WBGene00006844; WP:CE05534 WormBase description: unc-120 encodes a member of the MADS-box family of transcription factors that contains human and Drosophila serum response factor (SRF) and Saccharomyces cerevisiae MCM1 and ARG80; UNC-120 is required for locomotion and muscle development and for formation of the normal number of muscle A and I bands; UNC-120 is also required for maintaining wild-type expression levels of the muscle components actin and myosin; UNC-120 is first expressed in the early embryo in body wall muscle precursors and later is expressed in both body wall and vulval muscles. WormBase CDS description: MADS domain
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order                                         

D1086.1 D1086.1 P W All gene names: D1086.1; 5O579; CE09059; WBGene00008388; WP:CE09059
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

D1086.5 D1086.5 P W All gene names: D1086.5; 5O568; CE09063; WBGene00008392; WP:CE09063
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, list of genes in cluster A, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

D2007.5 D2007.5 P W All gene names: D2007.5; D2007.5.1; D2007.5.2; 3J246; CE00130; WBGene00017045; WP:CE00130
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

D2045.8 D2045.8 P W All gene names: D2045.8; 3L573; CE00608; WBGene00008425; WP:CE00608 WormBase description: TNF-alpha induced Protein B12
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

DH11.5 DH11.5 P W All gene names: DH11.5; CE32343; CE32344; CE32345; WBGene00008438; WP:CE32343; WP:CE32344; WP:CE32345
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

E01G4.3 E01G4.3 P W All gene names: E01G4.3; 2N752; CE09110; WBGene00008446; WP:CE09110
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0, Wang et al 2003                            
                                               S4 Dauer Enriched                                                                 

E03A3.6 E03A3.6 P W All gene names: unc-79; E03A3.6; 3F171; CE30742; NM_065413; WBGene00006811; WP:CE30742 WormBase description: A novel protein involved in responsiveness to volatile anesthetics; it is expressed primarily in the nervous system.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 daf-16 Resveratrol                                                  

E04F6.4 E04F6.4 P W All gene names: E04F6.4; 2H481; CE01216; WBGene00017124; WP:CE01216 WormBase description: V. virus protein K4
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

E04F6.8 E04F6.8 P W All gene names: E04F6.8; E04F6.8.1; E04F6.8.2; 2H500; CE01220; WBGene00017127; WP:CE01220
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, fem3 enriched genes, ViswanathanM et al 2005                              
                                              S2 daf-16 Resveratrol, Wang et al 2003  S3  genes pass                             
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

EEED8.2 EEED8.2 P W All gene names: EEED8.2; 2F707; CE01886; WBGene00017133; WP:CE01886
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

EGAP9.2 EGAP9.2 P W All gene names: CE2FT-1; fut-2; EGAP9.2; 5H52; CE09151; NM_072270; WBGene00001506; WP:CE09151 WormBase description: fut-2 encodes a unique alpha 1,2-fucosyltransferase specifically expressed in intestinal cells of larval and adult animals; recombinant FUT-2 expressed in human 293T cells exhibits a novel acceptor specificity profile compared with mammalian alpha 1,2-fucosyltransferases and the predicted protein shares very low amino acid identity with human alpha 1,2-fucosyltransferases, but its predicted type 2 topology and domain structure are typical of other glucosyltransferases.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

F01G10.8 F01G10.8 P W All gene names: daf-14; F01G10.8; 4L19; CE29090; NM_069479; WBGene00000910; WP:CE29090 WormBase description: daf-14 encodes a Smad-related protein that is unusual in that while its C-terminus is well-conserved with Smad proteins, it lacks the N-terminal DNA binding domain found in all other known Smads; DAF-14 is predicted to function as a transducer of the DAF-7/TGF-beta-mediated signal that promotes reproductive growth and negatively regulates dauer formation; as reduction of daf-14 function enhances the dauer constitutive phenotype of daf-8 mutants, and overexpression of daf-14 can rescue daf-8 mutant animals, it is likely that the DAF-14 and DAF-8 Smad proteins function in parallel to control dauer formation; further genetic analyses suggest that DAF-14 and DAF-8 function to antagonize the activities of the DAF-3 Smad and DAF-5 Sno/Ski oncoprotein, which are required for dauer formation; a DAF-14::GFP reporter is expressed in a dynamic pattern in tissues, such as the hypodermis, intestine, and pharynx, that are remodeled during dauer development. WormBase CDS description: Mouse MSMAD protein like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F07C6.3 F07C6.3 P W All gene names: F07C6.3; 4N553; CE05564; WBGene00008554; WP:CE05564
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F07H5.2 F07H5.2 P W All gene names: sgn-1; F07H5.2; 2J72; CE05569; NM_063466; WBGene00004790; WP:CE05569 WormBase description: gamma-sarcoglycan
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F07H5.5 F07H5.5 P W All gene names: F07H5.5; 2J79; WBGene00014309
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F08C6.4 F08C6.4 P W All gene names: sto-1; F08C6.4; CE27924; NM_076880; WBGene00006063; WP:CE27924; XI183 WormBase description: Erythrocyte band 7 integral membrane protein (human)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F08C6.7 F08C6.7 P W All gene names: unc-98; F08C6.7; CE31900; NM_076883; WBGene00006827; WP:CE31900; XI190 WormBase description: unc-98 encodes a protein with four C2H2 zinc fingers and several possible nuclear localization and export sequences; UNC-98 is required for normal mobility, M-line structures, and dense body (Z-line analog) structures; UNC-98 binds UNC-97/PINCH, HUM-6, and MEP-1; UNC-98 is located in M-lines, muscle cell nuclei, and perhaps dense bodies. WormBase CDS description: Zinc finger
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              TF, Reinke et al 2004, list of genes in cluster A,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F08F1.4 F08F1.4 P W All gene names: F08F1.4; F08F1.4b.1; F08F1.4b.2; CE27928; CE34293; WBGene00017258; WP:CE27928; WP:CE34293; XJ33
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F09B9.4 F09B9.4 P W All gene names: F09B9.4; CE37344; WBGene00008603; WP:CE37344; XK779
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated                                                   

F09E8.7 F09E8.7 P W All gene names: acr-1; lev-1; tmr-1; F09E8.7; 4N940; CE24888; NM_070133; WBGene00002974; WP:CE24888 WormBase description: lev-1 encodes an alpha subunit of nicotinic acetylcholine receptor (nAChR) which, when mutated, confers resistance to levamisole; LEV-1 is required for completely normal locomotion, and forms a cation channel when coexpressed with UNC-38 or UNC-63 and UNC-29; LEV-1 falls into the 'UNC-29' class of nAChR subunits, which includes UNC-29, ACR-2, and ACR-3. WormBase CDS description: acetylcholine receptor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F10G2.1 F10G2.1 P W All gene names: F10G2.1; 5H813; CE27945; WBGene00017362; WP:CE27945
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F10G8.5 F10G8.5 P W All gene names: ncs-2; F10G8.5; 1K610; CE09340; NM_060250; WBGene00003564; WP:CE09340 WormBase description: NCS-2 neuronal calcium sensor protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

F11A5.9 F11A5.9 P W All gene names: F11A5.9; F11A5.9.1; F11A5.9.2; 5Q697; CE15787; WBGene00008677; WP:CE15787 WormBase description: sodium/phosphate transporter
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Reinke et al 2004, list of genes in                                
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F11C1.6 F11C1.6 P W All gene names: nhr-25; F11C1.6; F11C1.6a.1; F11C1.6a.2; F11C1.6b.1; F11C1.6b.2; F11C1.6b.3; CE03191; CE35856; NM_077761; WBGene00003623; WP:CE03191; WP:CE35856; XN631 WormBase description: nhr-25 encodes a nuclear hormone receptor orthologous to Drosophila Ftz-F1; NHR-25 is required for embryogenesis, molting, vulval and gonadal development, and hypodermal expression of acn-1; nhr-25 is expressed in gonads and loaded into embryos as a maternal transcript; nhr-25 is zygotically expressed in progeny of the E cell, and then in hypodermis and gut; the role of NHR-25 in molting may be evolutionarily conserved between nematodes and arthopods.
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order,                                        
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Early genes, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

F11C7.2 F11C7.2 P W All gene names: F11C7.2; CE07051; WBGene00017376; WP:CE07051; XS11
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F11F1.6 F11F1.6 P W All gene names: F11F1.6; 3O493; CE33613; WBGene00008718; WP:CE33613
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, list of genes in cluster A, Reinke et al                               
                                              2004, list of genes in cluster order, Wang et al 2003                              
                                              S4 Climbing, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

F12F3.1 F12F3.1 P W All gene names: exp-2; F12F3.1; F12F3.1a.1; F12F3.1a.2; 5G623; CE09359; CE37629; CE37630; CE37631; WBGene00001374; WP:CE09359; WP:CE37629; WP:CE37630; WP:CE37631 WormBase description: exp-2 encodes a member of the six-transmembrane voltage-activated (Kv-type) family of potassium channels; exp-2 is required for normal pharyngeal muscle action potentials and hence, for normal feeding behavior; in addition, exp-2 is required for chemotaxis; when expressed in Xenopus oocytes, EXP-2 displays inward rectifying currents, however when assessed in endogenous pharyngeal tissue, EXP-2 displays hyperpolarization-activated outward currents; an EXP-2 translational reporter fusion is expressed strongly in pharyngeal muscles, amphid, phasmid, and head neurons, posterior enteric muscles, and occasionally faintly in the egg-laying muscles.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S6 removed genes of contamination                                 

F12F6.9 F12F6.9 P W All gene names: col-128; F12F6.9; 4M316; CE05597; NM_069774; WBGene00000702; WP:CE05597 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              LateList                                                                           

F13B6.3 F13B6.3 P W All gene names: F13B6.3; F13B6.3.1; F13B6.3.2; 4I228; CE31169; WBGene00017418; WP:CE31169
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order                                  

F13C5.2 F13C5.2 P W All gene names: F13C5.2; CE19384; WBGene00017423; WP:CE19384; XB213 WormBase description: bromodomain-containing protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F13D11.1 F13D11.1 P W All gene names: F13D11.1; CE04387; WBGene00017427; WP:CE04387; XG451 WormBase description: histidine acid phosphatase family (weak)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F13D11.2 F13D11.2 P W All gene names: hbl-1; lin-57; F13D11.2; CE23646; CE27956; NM_076575; WBGene00001824; WP:CE23646; WP:CE27956; XG445 WormBase description: hbl-1 encodes a protein that contains nine putative zinc finger domains of the C2H2 type and affects embryonic viability, locomotion, egg laying, body morphology, and hypodermal differentiation; expressed in hypodermal precursor cells, neuronal precursor cells, and pharyngeal cells during embryogenesis and is primarily expressed in neurons during larval development.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F13E6.1 F13E6.1 P W All gene names: F13E6.1; CE31474; WBGene00008745; WP:CE31474; XL294 WormBase description: D52 protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F14B8.6 F14B8.6 P W All gene names: F14B8.6; CE02649; WBGene00017448; WP:CE02649; XH548
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order, Wang                            
                                              et al 2003  S7 SAGE genes in the dataset, Wang et al                               
                                              2003  S8 SAGE genes in the dauer exit                                              

F14D12.2 F14D12.2 P W All gene names: unc-97; F14D12.2; CE04392; NM_076542; WBGene00006826; WP:CE04392; XG213 WormBase description: The unc-97 gene encodes a LIM domain-containing protein of the PINCH family that is highly similar to human LIMS1 (OMIM:602567) and LIMS2; UNC-97 functions as an adaptor protein important for assembly of muscle adherens junctions and the mechanosensory functions of the touch neurons; UNC-97 interacts with PAT-4/integrin-linked kinase and with UNC-98; UNC-97 colocalizes with PAT-3/beta integrin at dense bodies, focal adhesion-like muscle attachment structures. WormBase CDS description: LIM domain containing protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F14D2.7 F14D2.7 P W All gene names: F14D2.7; 2D620; CE16982; WBGene00017455; WP:CE16982
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F14H12.1 F14H12.1 P W All gene names: col-165; F14H12.1; CE07061; NM_076346; WBGene00000738; WP:CE07061; XE973 WormBase description: cuticular collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F14H8.1 F14H8.1 P W All gene names: obr-2; F14H8.1; 5P492; CE35859; NM_074294; WBGene00008832; WP:CE35859 WormBase description: oxysterol-binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, fem3 enriched genes                                             

F15A2.6 F15A2.6 P W All gene names: sad-1; F15A2.6; CE28218; NM_077852; WBGene00004719; WP:CE28218; XO108 WormBase description: sad-1 encodes a novel serine/threonine protein kinase; SAD-1 activity is required for several aspects of presynaptic development, including termination of axon outgrowth and presynaptic vesicle clustering, in GABAergic motor neurons and the ASI amphid chemosensory neuron; in addition, overexpression studies suggest that SAD-1 may also play a role in regulating axonal-dendritic polarity; SAD-1 is expressed in the nervous system, where it localizes asymmetrically to the synapse-rich regions of axons. WormBase CDS description: serine/threonine kinase (KIN1/SNF1/Nim1 subfamily)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order                                  

F15A4.6 F15A4.6 P W All gene names: F15A4.6; 2M763; CE15843; WBGene00008841; WP:CE15843 WormBase description: Toxocara surface glycoprotein like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

F15B9.7 F15B9.7 P W All gene names: cdh-6; F15B9.7; 5N513; CE37969; NM_073855; WBGene00000398; WP:CE37969 WormBase description: cdh-6 encodes a cadherin homolog, with a domain resembling seven transmembrane-sequence receptors, that may be orthologous to the Drosophila cadherin STAN; both CDH-6 and STAN are homologous to secretin-type receptors, have extracellular domains of similar lengths and domain compositions (with similar numbers of cadherin, EGF, laminin G, GFS, and HormR domains); however, the cytoplasmic domains of CDH-6 and STAN are dissimilar. WormBase CDS description: cadherin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F16B4.9 F16B4.9 P W All gene names: nhr-178; F16B4.9; 5C82; CE17680; WBGene00017510; WP:CE17680 WormBase description: nuclear hormone receptor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F16D3.5 F16D3.5 P W All gene names: F16D3.5; WBGene00008888
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig2D mariner, Murphy                            
                                              et al 2003  Fig2 Class1 elongate lifespan, Reinke et al                            
                                              2004, list of genes in cluster A, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              mixed sperm soma, Reinke et al 2004, fem3 enriched                                 
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F16H6.10 F16H6.10 P W All gene names: F16H6.10; 5S704; CE27753; WBGene00008900; WP:CE27753
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F16H6.5 F16H6.5 P W All gene names: F16H6.5; 5S679; CE18601; WBGene00008895; WP:CE18601
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S6 removed genes of contamination                                 

F16H6.7 F16H6.7 P W All gene names: F16H6.7; 5S682; CE18603; WBGene00008897; WP:CE18603
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Murphy et al 2003  Fig2 Class1 elongate                                    
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S8 SAGE genes in the dauer exit                                           

F17B5.1 F17B5.1 P W All gene names: F17B5.1; 1N779; CE15865; WBGene00008905; WP:CE15865
                                              
Member of lists (Publications lists):
                                              McElwee et al 2003  T1 targets of                                 
                                              daf-16, Murphy et al 2003  Fig2 Class1 elongate                                    
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, herm soma enriched genes, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              daf-16 Resveratrol                                                                 

F17C11.3 F17C11.3 P W All gene names: col-153; F17C11.3; 5L431; CE05650; NM_073392; WBGene00000726; WP:CE05650 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Romagnolo et al 2002  Fig3b Cell Structure,                                        
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              LateList                                                                           

F17C8.4 F17C8.4 P W All gene names: ras-2; F17C8.4; F17C8.4.1; F17C8.4.2; F17C8.4.3; 3F828; CE00958; NM_065571; Ras2; WBGene00004311; WP:CE00958 WormBase description: ras-2 encodes member of the Ras subfamily of RAS small GTPases with highest similarity to human M-Ras WormBase CDS description: Ras-like protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F17H10.2 F17H10.2 P W All gene names: F17H10.2; CE03227; CE39242; WBGene00008926; WP:CE03227; WP:CE39242; XN731
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

F17H10.3 F17H10.3 P W All gene names: F17H10.3; CE31483; WBGene00008927; WP:CE31483; XN732 WormBase description: PhoX homologous domain, present in p47phox and p40phox.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

F18E3.7 F18E3.7 P W All gene names: F18E3.7; 5H914; CE07083; CE32864; WBGene00017565; WP:CE07083; WP:CE32864 WormBase description: D-amino acid oxidase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F18E9.3 F18E9.3 P W All gene names: F18E9.3; CE35494; WBGene00017569; WP:CE35494; XJ207
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F18H3.4 F18H3.4 P W All gene names: F18H3.4; CE23671; WBGene00008940; WP:CE23671; XO149
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F20A1.1 F20A1.1 P W All gene names: F20A1.1; 5H533; CE07091; WBGene00017613; WP:CE07091
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F20A1.10 F20A1.10 P W All gene names: F20A1.10; F20A1.10.1; F20A1.10.2; 5H534; CE07100; WBGene00017621; WP:CE07100
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F21A10.2 F21A10.2 P W All gene names: F21A10.2; F21A10.2a.1; F21A10.2a.2; F21A10.2a.3; F21A10.2a.4; CE23678; CE31488; CE31489; WBGene00008999; WP:CE23678; WP:CE31488; WP:CE31489; XK800
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F21D5.3 F21D5.3 P W All gene names: F21D5.3; F21D5.3.1; F21D5.3.2; F21D5.3.3; 4J499; CE03246; WBGene00009008; WP:CE03246 WormBase description: laccase like copper oxidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

F21F3.1 F21F3.1 P W All gene names: F21F3.1; 1F479; CE32870; WBGene00017671; WP:CE32870
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F21F3.5 F21F3.5 P W All gene names: tmr-2; unc-38; F21F3.5; 1F466; CE24908; NM_059071; WBGene00006774; WP:CE24908 WormBase description: unc-38 encodes a nicotinic acetylcholine receptor (nAChR) alpha subunit; UNC-38 is required for normal locomotion and egg-laying, and functions as a subunit of a ligand-gated ion channel that likely mediates fast actions of acetylcholine at neuromuscular junctions and in the nervous system; when coexpressed with UNC-29 and LEV-1, non-alpha nAChR subunits, the resulting multimer can form levamisole-gated channels; UNC-38 is expressed postsynaptically in muscles and neurons where it colocalizes with TAX-6, and with ACR-8, ACR-12, and UNC-29, respectively. WormBase CDS description: ligand-gated ionic channel
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F21G4.5 F21G4.5 P W All gene names: F21G4.5; CE09551; WBGene00009026; WP:CE09551; XK527
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, Wang et al                              
                                              2003  S4 Early genes, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

F22A3.1 F22A3.1 P W All gene names: ets-4; F22A3.1; CE34001; WBGene00017687; WP:CE34001; XH139 WormBase description: DNA binding protein, ETS domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S4 genes pass two-wayANOVA P0                                                     

F22B5.3 F22B5.3 P W All gene names: cut-3; F22B5.3; 2I736; CE02198; WBGene00009041; WP:CE02198 WormBase description: cuticulin
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order                                  

F22B8.7 F22B8.7 P W All gene names: F22B8.7; 5Q577; CE37509; WBGene00009049; WP:CE37509
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F22F1.1 F22F1.1 P W All gene names: hil-3; F22F1.1; H1.3; CE04443; NM_076974; WBGene00001854; WP:CE04443; XI779 WormBase description: histone h1
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, IVb male soma enriched genes                                                 

F23B2.5 F23B2.5 P W All gene names: flp-1; F23B2.5; 4J909; CE09585; CE32045; CE32046; NM_069191; NM_182277; NM_182278; WBGene00001444; WP:CE09585; WP:CE32045; WP:CE32046 WormBase description: flp-1 can encode up to seven distinct, yet highly similar, FMRFamide-related peptides (FaRPs), small neuromodulatory peptides that are characterized by a C-terminal Arg-Phe-amide motif; in C. elegans, FLP-1 peptides are required for regulation of several behaviors, including well-coordinated, sinusoidal movement and the transition between active and inactive states of egg-laying; receptors for the FLP-1 peptides have not yet been identified, but genetic studies indicate that FLP-1 peptides may act through G-protein coupled receptors; flp-1 mRNAs are detected at all developmental stages, and a FLP-1 translational reporter fusion detects expression in the anteriorly positioned neurons AVK, AVA, AVE, RIG, RMG, AIY, AIA, and M5
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F23F1.2 F23F1.2 P W All gene names: F23F1.2; 2A325; CE09602; WBGene00017743; WP:CE09602
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 transient-induction                            
                                              Ethanol-res, Reinke et al 2004, list of genes in                                   
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F23F12.9 F23F12.9 P W All gene names: F23F12.9; 3H569; CE01256; CE32389; WBGene00017755; WP:CE01256; WP:CE32389
                                              
Member of lists (Publications lists):
                                              Portman et al 2004  T1 25 candidate                               
                                              ray genes, Reinke et al 2004, list of genes in cluster                             
                                              A, Reinke et al 2004, list of genes in cluster order                               

F25C8.3 F25C8.3 P W All gene names: F25C8.3; 5V367; CE31916; CE35507; WBGene00009105; WP:CE31916; WP:CE35507
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F25H9.5 F25H9.5 P W All gene names: frm-10; F25H9.5; 5N947; CE09662; NM_073939; WBGene00001496; WP:CE09662 WormBase description: frm-10 encodes a protein that contains an N-terminal FERM (Band 4.1-ezrin-radixin-moesin) domain; by homology, FRM-10 is predicted to function as a membrane-cytoskeleton linker protein that plays a role in cell adhesion, migration, or organization of cell surface structures; however, as loss of frm-10 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of FRM-10 in C. elegans development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

F28G4.1 F28G4.1 P W All gene names: cyp-37B1; F28G4.1; 5Q759; CE15919; NM_074708; WBGene00009226; WP:CE15919 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 Cytochrome                                
                                              P450, ReichertK et al 2005 T1 xenobiotic induced P450,                             
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order,                                        
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S6 removed genes of contamination                                         

F29A7.4 F29A7.4 P W All gene names: F29A7.4; 2D41; CE36835; WBGene00017914; WP:CE36835
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F29B9.9 F29B9.9 P W All gene names: col-111; F29B9.9; 4F420; CE34831; NM_068206; WBGene00000685; WP:CE34831 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

F29D11.1 F29D11.1 P W All gene names: egf-4; lrp-1; F29D11.1; 1I209; CE05765; NM_059726; WBGene00003071; WP:CE05765 WormBase description: low density lipid receptor-rlated protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F30A10.2 F30A10.2 P W All gene names: F30A10.2; 1K56; CE39360; WBGene00009261; WP:CE39360
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 LateList, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

F31D4.5 F31D4.5 P W All gene names: F31D4.5; 5V327; CE15931; WBGene00009292; WP:CE15931 WormBase description: PH (pleckstrin homology) domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F31E3.1 F31E3.1 P W All gene names: ceh-20; F31E3.1; 3I71; CE01241; WBGene00000443; WP:CE01241 WormBase description: A co-factor homeodomain protein and homolog of Drosophila Extradenticle (Exd) that together with ceh-40 affects embryogenesis, loss of both functions affect embryonic viability; it is required as a cofactor for LIN-39- and MAB-5- dependent postembryonic mesoderm patterning; it genetically interacts with unc-62.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

F32A5.4 F32A5.4 P W All gene names: F32A5.4; F32A5.4a.1; F32A5.4a.2; 2H519; CE01274; CE32640; WBGene00017970; WP:CE01274; WP:CE32640 WormBase description: Immunodominant antigen
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F32A5.5 F32A5.5 P W All gene names: aqp-1; dod-4; F32A5.5; F32A5.5b.1; F32A5.5b.2; 2H526; CE01275; CE29304; NM_063109; NM_182133; WBGene00000169; WP:CE01275; WP:CE29304
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Murphy et al 2003  Fig2 Class1 elongate                            
                                              lifespan, ReichertK et al 2005  T3 xenobiotic                                      
                                              downregulated, Reinke et al 2004, list of genes in                                 
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F32D8.10 F32D8.10 P W All gene names: F32D8.10; 5L384; CE05789; WBGene00009333; WP:CE05789
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S4 TransientList, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F32D8.9 F32D8.9 P W All gene names: spp-16; F32D8.9; 5L378; CE05788; NM_073379; WBGene00005001; WP:CE05788
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F32G8.4 F32G8.4 P W All gene names: F32G8.4; 5L39; CE37903; WBGene00009340; WP:CE37903 WormBase description: Putative membrane protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F32H5.4 F32H5.4 P W All gene names: F32H5.4; 5N841; CE09888; WBGene00009350; WP:CE09888 WormBase description: transport protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes                                 

F35B12.1 F35B12.1 P W All gene names: srx-84; F35B12.1; 5M81; CE36298; WBGene00005975; WP:CE36298 WormBase description: 7TM receptor, srx family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F35B12.3 F35B12.3 P W All gene names: F35B12.3; CE31929; NM_073541; WBGene00009383; WP:CE31929
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

F35B3.4 F35B3.4 P W All gene names: F35B3.4; CE07171; WBGene00018031; WP:CE07171; XR632
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F35C12.3 F35C12.3 P W All gene names: F35C12.3; F35C12.3b.1; F35C12.3b.2; 1K386; CE09915; CE38339; CE38340; WBGene00009408; WP:CE09915; WP:CE38339; WP:CE38340
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              Dauer Enriched, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

F35F10.1 F35F10.1 P W All gene names: F35F10.1; 5D795; CE36840; WBGene00018052; WP:CE36840
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F35F10.5 F35F10.5 P W All gene names: F35F10.5; 5D759; CE09930; WBGene00018055; WP:CE09930
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 TransientList, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F35G2.4 F35G2.4 P W All gene names: phy-2; F35G2.4; F35G2.4.1; F35G2.4.2; 4M976; CE05811; NM_069916; WBGene00004025; WP:CE05811 WormBase description: prolyl 4-hydroxylase alpha subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Romagnolo et al 2002  Fig3b others                                  

F35H8.2 F35H8.2 P W All gene names: F35H8.2; 2J843; CE00980; WBGene00009447; WP:CE00980
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F35H8.5 F35H8.5 P W All gene names: elr-1; exc-7; F35H8.5; 2J871; CE00983; NM_063656; WBGene00001368; WP:CE00983 WormBase description: exc-7 encodes an ELAV, an mRNA-binding protein homologous to Drosophila ELAV and human HuC/D (OMIM:603458, 168360, autoimmune antigens associated with paraneoplastic neurologic disorders); EXC-7 is required for formation of the tailspike and the excretory cell canals; exc-7 mutations enhance defects produced by mutations in exc-3, predicted to encode a peptidase, and sma-1, which encodes beta H-spectrin, a key component of the apical cytokeleton of polarized epithelial cells such as the excretory cell; in vitro, EXC-7 can bind the sma-1 mRNA 3' UTR, and thus is predicted to regulate SMA-1 expression in vivo; EXC-7 is expressed transiently in the excretory cell nucleus during mid-embryogenesis and during larval stages is detected in the pharynx, nerve ring, and nerve cord nuclei. WormBase CDS description: HUD
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol                                                                        

F36F2.1 F36F2.1 P W All gene names: F36F2.1; 1J595; CE15975; WBGene00009475; WP:CE15975
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class2                               
                                              shorten lifespan, Reinke et al 2004, list of genes in                              
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F36H1.6 F36H1.6 P W All gene names: alh-3; F36H1.6; 4L789; CE05817; NM_069653; WBGene00000109; WP:CE05817 WormBase description: alh-3 encodes an aldehyde dehydrogenase predicted to be mitochondrial. WormBase CDS description: formyltetrahydrofolate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

F36H5.2 F36H5.2 P W All gene names: math-27; F36H5.2; F36H5.2a.1; F36H5.2a.2; F36H5.2c.1; F36H5.2c.2; 2C59; CE31806; CE31807; CE33393; WBGene00018101; WP:CE31806; WP:CE31807; WP:CE33393 WormBase description: The F36H5.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen                                                                                

F37B4.2 F37B4.2 P W All gene names: ifc-1; F37B4.2; F37B4.2.1; F37B4.2.2; 5D361; CE27378; Cel IF C1; CelIF c1; NM_071382; WBGene00002055; WP:CE27378 WormBase description: ifc-1 encodes a nonessential intermediate filament protein; IFC-1 is predicted to function as a structural component of the cytoskeleton; IFC-1 has no function in RNAi assays. WormBase CDS description: intermediate filament protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F38B7.2 F38B7.2 P W All gene names: F38B7.2; 5M23; CE05826; WBGene00009533; WP:CE05826
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Shen et al 2005  T1 hif-1indepen hypoxia, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 Dauer Enriched, Wang et al 2003  S4 genes pass                            
                                              two-wayANOVA P0                                                                    

F38H12.3 F38H12.3 P W All gene names: nhr-181; F38H12.3; 5E571; CE17809; WBGene00018189; WP:CE17809 WormBase description: nuclear hormone receptor
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster A,                              
                                              Reinke et al 2004, list of genes in cluster order                                  

F39E9.2 F39E9.2 P W All gene names: F39E9.2; 2D587; CE32655; WBGene00018195; WP:CE32655
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, herm soma enriched genes, ViswanathanM et al 2005                            
                                               S2 daf-16 Resveratrol                                                             

F39G3.5 F39G3.5 P W All gene names: F39G3.5; 5F201; CE10120; CE36933; WBGene00018210; WP:CE10120; WP:CE36933
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , Reinke et al 2004, list of genes                              
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F40F8.4 F40F8.4 P W All gene names: F40F8.4; 2L430; CE05844; WBGene00009577; WP:CE05844
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen                                                                                

F40F8.7 F40F8.7 P W All gene names: pqm-1; pqm-132; F40F8.7; 2L442; CE05846; CePqM132; NM_063990; WBGene00004096; WP:CE05846 WormBase description: pqm-1 encodes a C2H2-type zinc finger and leucine zipper-containing protein that is upregulated in response to oxidative stress induced by paraquat treatment; PQM-1 may function as a stress-responsive transcription factor. WormBase CDS description: Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F41B4.2 F41B4.2 P W All gene names: F41B4.2; F41B4.2b.1; F41B4.2b.2; F41B4.2b.3; CE07212; CE30981; WBGene00018258; WP:CE07212; WP:CE30981; XH450
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes                               

F41B5.3 F41B5.3 P W All gene names: cyp-33C5; F41B5.3; 5C725; CE27379; NM_071215; WBGene00018261; WP:CE27379 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F41E6.6 F41E6.6 P W All gene names: tag-196; F41E6.6; F41E6.6.1; F41E6.6.2; 5J77; CE35305; WBGene00007055; WBGene00018287; WP:CE35305 WormBase description: cysteine protease and a protease inhibitor
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig1 aging-regulated                            
                                              genes, Lund et al 2002  Fig4 Mount 15, McCarroll et al                             
                                              2004  SFig1-4 conserved w/ Drosoph, Reinke et al 2004,                             
                                              list of genes in cluster A, Reinke et al 2004, list of                             
                                              genes in cluster order, ViswanathanM et al 2005  S2                                
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F41G3.11 F41G3.11 P W All gene names: srx-95; F41G3.11; 2H44; CE36543; NM_062979; WBGene00005986; WP:CE36543 WormBase description: 7TM chemoreceptor, srx family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, herm soma enriched genes,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F41G3.12 F41G3.12 P W All gene names: F41G3.12; 2H52; CE32047; WBGene00018304; WP:CE32047
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F41G4.3 F41G4.3 P W All gene names: sto-5; F41G4.3; CE25886; CE34554; CE34555; WBGene00006067; WP:CE25886; WP:CE34554; WP:CE34555; XR430 WormBase description: stomatin-like protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

F42C5.1 F42C5.1 P W All gene names: F42C5.1; WBGene00043319
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F42C5.9 F42C5.9 P W All gene names: F42C5.9; F42C5.9.1; F42C5.9.2; 4I80; CE04562; WBGene00018349; WP:CE04562
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F42D1.2 F42D1.2 P W All gene names: F42D1.2; F42D1.2.1; F42D1.2.2; CE10298; WBGene00009628; WP:CE10298; XP411 WormBase description: tyrosine aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

F44A6.5 F44A6.5 P W All gene names: F44A6.5; CE03326; WBGene00009677; WP:CE03326; XK834
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F44B9.1 F44B9.1 P W All gene names: dpf-6; F44B9.1; 3J129; CE30989; CE30990; CE30991; NM_171203; NM_171204; NM_171205; WBGene00001059; WP:CE30989; WP:CE30990; WP:CE30991 WormBase description: acylamino-acid-releasing enzyme
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S7 SAGE genes in the dataset, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit                                                    

F44D12.1 F44D12.1 P W All gene names: F44D12.1; 4K777; CE05865; WBGene00009678; WP:CE05865 WormBase description: Tight junction protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F44G3.8 F44G3.8 P W All gene names: F44G3.8; 5Q606; CE39255; WBGene00009709; WP:CE39255 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. WormBase CDS description: F-box domain.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F45D3.3 F45D3.3 P W All gene names: F45D3.3; 5N30; CE10472; WBGene00009723; WP:CE10472
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F45E4.5 F45E4.5 P W All gene names: F45E4.5; 4I392; CE35313; WBGene00018470; WP:CE35313
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, list of genes in cluster A, Reinke et al                               
                                              2004, list of genes in cluster order                                               

F46A9.6 F46A9.6 P W All gene names: mec-8; F46A9.6; F46A9.6.1; F46A9.6.2; F46A9.6.3; 1K18; CE08260; NM_060107; WBGene00003172; WP:CE08260 WormBase description: mecanosensory gene mec-8
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Wang et al 2003  S4 Early genes, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

F46C8.2 F46C8.2 P W All gene names: col-174; F46C8.2; CE04577; NM_076875; WBGene00000747; WP:CE04577; XI167 WormBase description: cuticle collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F46G10.1 F46G10.1 P W All gene names: F46G10.1; CE31520; WBGene00009796; WP:CE31520; XN928
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F46G10.6 F46G10.6 P W All gene names: hlh-23; mxl-3; F46G10.6; CE05882; NM_077822; WBGene00003511; WP:CE05882; XN968 WormBase description: Helix-loop-helix DNA-binding domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

F46H6.2 F46H6.2 P W All gene names: dgk-2; F46H6.2; F46H6.2b.1; F46H6.2b.2; F46H6.2b.3; CE34027; CE34028; CE34029; WBGene00000959; WP:CE34027; WP:CE34028; WP:CE34029; XF114 WormBase description: dgk-2 encodes a putative diacylglycerol kinase.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F47A4.3 F47A4.3 P W All gene names: F47A4.3; CE34188; CE37375; WBGene00009800; WP:CE34188; WP:CE37375; XK444 WormBase description: breakpoint cluster region (BCR) protein domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F47B10.5 F47B10.5 P W All gene names: F47B10.5; CE37376; WBGene00009816; WP:CE37376; XL508
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F47B10.9 F47B10.9 P W All gene names: F47B10.9; CE03359; WBGene00009820; WP:CE03359; XL530
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Romagnolo et                              
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F47D12.6 F47D12.6 P W All gene names: F47D12.6; 3H376; CE01950; WBGene00018562; WP:CE01950
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

F47G3.1 F47G3.1 P W All gene names: F47G3.1; F47G3.4; CE29327; WBGene00018576; WP:CE29327; XD11
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated, ViswanathanM et al                               
                                              2005  S2 daf-16 Resveratrol                                                        

F47G9.4 F47G9.4 P W All gene names: F47G9.4; 5L798; CE05886; WBGene00009831; WP:CE05886 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig2D mariner, Reinke                            
                                              et al 2004, list of genes in cluster A, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed sperm soma, Reinke et al 2004, fem3                                    
                                              enriched genes                                                                     

F47H4.2 F47H4.2 P W All gene names: F47H4.2; 5R839; CE37016; WBGene00009835; WP:CE37016 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

F49C12.6 F49C12.6 P W All gene names: F49C12.6; 4K68; CE03366; WBGene00009876; WP:CE03366
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F49E10.5 F49E10.5 P W All gene names: F49E10.5; CE29966; WBGene00018642; WP:CE29966; XG491 WormBase description: dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol, Wang et al 2003  S4 Early genes, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

F49E11.11 F49E11.11 P W All gene names: F49E11.11; 4N825; CE05907; WBGene00009896; WP:CE05907 WormBase description: testis-specific protein TPX-1 like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

F52E4.5 F52E4.5 P W All gene names: F52E4.5; CE07272; WBGene00018702; WP:CE07272; XD704
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              LateList                                                                           

F52E4.8 F52E4.8 P W All gene names: F32E4.8; F52E4.8; CE09875; WBGene00018704; WP:CE09875; XD718
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F52H2.2 F52H2.2 P W All gene names: aat-3; F52H2.2; CE28440; NM_076060; WBGene00000004; WP:CE28440; XD175 WormBase description: aat-3 encodes an amino acid transporter catalytic subunit; when co-expressed in Xenopus oocytes with the ATG-2 glycoprotein subunit, AAT-3 is able to facilitate amino acid uptake and exchange, showing a relatively high affinity for small and some large neutral amino acids; in addition, AAT-3 is able to covalently associate with ATG-2 or ATG-1 to form heterodimers in the Xenopus expression system; when co-expressed with ATG-2, AAT-3 localizes to the cell surface of oocytes, but when expressed alone, or with ATG-1, AAT-3 localizes intracellularly. WormBase CDS description: amino acid permease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F53A9.1 F53A9.1 P W All gene names: F53A9.1; CE02760; WBGene00018724; WP:CE02760; XJ331
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F53A9.7 F53A9.7 P W All gene names: F53A9.7; CE02767; WBGene00018730; WP:CE02767; XJ334
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, list of genes in cluster A, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

F53B3.5 F53B3.5 P W All gene names: F53B3.5; CE30142; WBGene00018743; WP:CE30142; XD492 WormBase description: F53B3.5 encodes a claudin homolog that may regulate ion channels; F53B3.5 is distantly similar to mammalian voltage-dependent calcium channel gamma subunits that are known or suspected to prevent epilepsy in vivo (e.g., stargazin; MGI:1316660); F53B3.5 has no obvious function in mass RNAi assays; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Wang et al 2003  S4 Climbing, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F53B6.2 F53B6.2 P W All gene names: F53B6.2; 1J508; CE32429; CE36859; WBGene00009958; WP:CE32429; WP:CE36859 WormBase description: thrombospondin like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F53F4.13 F53F4.13 P W All gene names: F53F4.13; 5O92; CE10978; WBGene00009995; WP:CE10978
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

F53F4.5 F53F4.5 P W All gene names: fmo-14; fmo-4; F53F4.5; F53F4.5.1; F53F4.5.2; 5O84; CE30676; NM_073969; WBGene00001479; WP:CE30676 WormBase description: fmo-14 encodes a protein with homology to human hepatic flavin-containing monooxygenase 5. WormBase CDS description: flavin-containing monoxygenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

F54B11.10 F54B11.10 P W All gene names: F54B11.10; CE05934; WBGene00010033; WP:CE05934; XO197
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

F54D1.6 F54D1.6 P W All gene names: F54D1.6; 4M59; CE37523; WBGene00010047; WP:CE37523
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F54D7.4 F54D7.4 P W All gene names: zig-7; F54D7.4; 1F360; CE33929; NM_059050; WBGene00006984; WP:CE33929
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F54D8.1 F54D8.1 P W All gene names: dpy-17; F54D8.1; F54D8.1.1; F54D8.1.2; 3G197; CE11066; NM_065685; WBGene00001076; WBGene00018799; WP:CE11066 WormBase description: Uncloned locus that affects body length and outgrowth of posterior canal cell processes.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F54D8.3 F54D8.3 P W All gene names: alh-1; F54D8.3; F54D8.3a.1; F54D8.3a.2; F54D8.3b.1; F54D8.3b.2; F54D8.3b.3; 3G169; CE29809; CE32434; NM_065680; NM_181921; WBGene00000107; WP:CE29809; WP:CE32434 WormBase description: alh-1 is orthologous to the human gene ALDEHYDE DEHYDROGENASE 2, MITOCHONDRIAL (ALDH2; OMIM:100650), in which a polymorphism can lead to acute ethanol intolerance.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F54E4.3 F54E4.3 P W All gene names: F54E4.3; CE11078; WBGene00010059; WP:CE11078; XP252
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F54E7.7 F54E7.7 P W All gene names: rcn-1; F54E7.7; 3G772; CE31002; DSCR1L; NM_065822; SC; WBGene00004321; WP:CE31002 WormBase description: rcn-1 encodes a calcipressin, which binds and inhibits calcineurin; RCN-1's orthologs include yeast Rcn1p and human DSCR1 (OMIM:602917; overexpressed in Down syndrome and Alzheimer disease); rcn-1 is expressed in hypodermal seam cells, various neurons, vulval epithelial and muscle cells, marginal pharyngeal cells, and in the male tail; rcn-1 transcription is regulated by TAX-6, and RCN-1 binds TAX-6 protein if free Ca[2+] is present; RCN-1 overexpression, like calcineurin deficiency, causes defects in body size, cuticle thickness, fertility, growth rate, and serotonin-resistance in egg-laying.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F55A12.7 F55A12.7 P W All gene names: apm-1; F55A12.7; 1F912; CE30145; NM_059171; WBGene00000150; WP:CE30145 WormBase description: The apm-1 gene encodes an adaptin: specifically, it encodes an ortholog of the mu1-II subunit of adaptor protein complex 1 (AP-1). WormBase CDS description: clathrin coat assembly protein complex 1 medium chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              fem3 enriched genes, ViswanathanM et al 2005  S2 daf-16                            
                                              Resveratrol                                                                        

F55C12.7 F55C12.7 P W All gene names: tag-234; F55C12.7; F55C12.7.1; F55C12.7.2; 2G155; CE28455; WBGene00018874; WP:CE28455
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F55G1.7 F55G1.7 P W All gene names: F55G1.7; 4I232; CE07284; WBGene00018903; WP:CE07284
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, list of genes in cluster A, Reinke et al                               
                                              2004, fem1 enriched genes, Reinke et al 2004, list of                              
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Wang et al 2003  S6 removed genes of contamination                            

F55G11.5 F55G11.5 P W All gene names: dod-22; F55G11.5; 4N731; CE18751; NM_070081; WBGene00010125; WP:CE18751
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F56A11.3 F56A11.3 P W All gene names: efn-4; mab-26; F56A11.3; 4B319; CE29503; NM_067546; WBGene00001165; WP:CE29503 WormBase description: efn-4 encodes a member of the ephrin family of ligands that affects neuroblast migrations during closure of the ventral gastrulation cleft and subsequent epidermal morphogenesis, possibly functioning independently of EFN-1, EFN-2, EFN-3, and the VAB-1 receptor during morphogenesis; can interact with VAB-1 in vitro, and is expressed in neural and epidermal precursors at the 100-cell stage, in head neurons, pharyngeal cells, lateral and tail neurons, and in the ectoderm during epidermal enclosure.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order                                  

F56B6.6 F56B6.6 P W All gene names: F56B6.6; CE04666; WBGene00018937; WP:CE04666; XE150
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F56D5.1 F56D5.1 P W All gene names: col-121; F56D5.1; 4K160; CE05967; NM_069254; WBGene00000695; WP:CE05967 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F56D5.6 F56D5.6 P W All gene names: F56D5.6; 4K175; CE33797; WBGene00010150; WP:CE33797
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Lund et al 2002  Fig2D mariner, Reinke et al                               
                                              2004, list of genes in cluster A, Reinke et al 2004,                               
                                              list of genes in cluster order                                                     

F56D5.7 F56D5.7 P W All gene names: F56D5.7; WBGene00010151
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F57B7.2 F57B7.2 P W All gene names: F57B7.2; 5L922; CE05990; WBGene00010192; WP:CE05990 WormBase description: SCP-like extracellular Proteins
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

F57G12.2 F57G12.2 P W All gene names: F57G12.2; CE03427; WBGene00010222; WP:CE03427; XM772
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F57H12.3 F57H12.3 P W All gene names: ora-1; F57H12.3; 4I743; CE17124; NM_068933; WBGene00003879; WP:CE17124
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Jones et al 2001  T3 20 most abundant                                      
                                              Mixed-stage, Reinke et al 2004, list of genes in                                   
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              LateList                                                                           

F57H12.6 F57H12.6 P W All gene names: F57H12.6; 4I740; CE32447; WBGene00019021; WP:CE32447
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

F58H1.2 F58H1.2 P W All gene names: F58H1.2; 5M409; CE06026; WBGene00010285; WP:CE06026
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

F58H1.4 F58H1.4 P W All gene names: F58H1.4; 5M416; CE06028; WBGene00010287; WP:CE06028
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F58H1.7 F58H1.7 P W All gene names: F58H1.7; 5M444; CE11412; CE20895; WBGene00010290; WP:CE11412; WP:CE20895 WormBase description: low-density lipoprotein receptor
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

F58H7.8 F58H7.8 P W All gene names: F58H7.8; 4B663; CE17936; WBGene00019073; WP:CE17936
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes                                 

F59A7.5 F59A7.5 P W All gene names: F59A7.5; 5C501; CE30810; CE35327; WBGene00019092; WP:CE30810; WP:CE35327
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F59E11.12 F59E11.12 P W All gene names: nhr-144; F59E11.12; F59E11.12b.1; F59E11.12b.2; 5J452; CE33120; CE35888; WBGene00019117; WP:CE33120; WP:CE35888
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, herm soma enriched genes                                   

F59F4.1 F59F4.1 P W All gene names: F59F4.1; F59F4.1.1; F59F4.1.2; CE11546; WBGene00010336; WP:CE11546; XQ454 WormBase description: acyl-CoA oxidase I
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

H04M03.4 H04M03.4 P W All gene names: H04M03.4; H04M03.4.1; H04M03.4.2; H04M03.D; 4G653; CE38614; WBGene00019154; WP:CE38614 WormBase description: H04M03.4 encodes a UDP-galactopyranose mutase predicted to synthesize galactofuranose (Gal(f)) as a nucleotide sugar (UDP-Gal(f)); recombinant H04M03.4 has biochemical activity either in vivo (expressed in E. coli) or in vitro; orthologs of H04M03.4 are found in the urochordates Halocynthia and Ciona.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

H06A10.1 H06A10.1 P W All gene names: H06A10.1; CE18805; WBGene00010368; WP:CE18805; XO127
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

H20J18.1 H20J18.1 P W All gene names: scd-1; H20J18.1; CE18818; CE31554; NM_171785; NM_171974; WBGene00004739; WP:CE18818; WP:CE31554; XN124 WormBase description: scd-1 encodes a novel protein with several regions that are extremely glutamine (Q) rich, interspersed with other residues (usually alanine); SCD-1 affects signalling by proteins in the DAF-7/transforming growth factor (TGF)-beta pathway (DAF-1, DAF-8, and DAF-14), and the Q-rich regions of SCD-1 protein may mediate epigenetic changes of stably heritable tertiary conformation.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

H36L18.2 H36L18.2 P W All gene names: H36L18.2; H36L18.2.1; H36L18.2.2; CE19945; WBGene00010424; WP:CE19945; XN272
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

H41C03.1 H41C03.1 P W All gene names: H41C03.1; 2G147; CE19507; WBGene00019268; WP:CE19507
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

JC8.8 JC8.8 P W All gene names: JC8.8; JC8.8.1; JC8.8.2; 4O16; CE33800; WBGene00010440; WP:CE33800 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, fem3 enriched genes, Reinke                              
                                              et al 2004, mixed sperm soma, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

K02C4.4 K02C4.4 P W All gene names: ltd-1; K02C4.4; 2I380; CE32687; NM_063296; WBGene00003089; WP:CE32687 WormBase description: ltd-1 encodes a protein with LIM and transglutaminase domains; LTD-1 is homologous to the mouse KY protein (MGI:96709, mutated in kyphoscoliosis), and to the HILLARIN protein of Hirudo medicinalis, found at axon hillocks; ltd-1 is expressed in hypodermal cells from the twofold stage embryo to adulthood, but has no obvious function in mass RNAi assays. WormBase CDS description: LIM domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

K02D7.1 K02D7.1 P W All gene names: K02D7.1; 4B46; CE17994; WBGene00019298; WP:CE17994 WormBase description: K02D7.1 is orthologous to the human gene PURINE NUCLEOSIDE PHOSPHORYLASE (NP; OMIM:164050), which when mutated leads to disease. WormBase CDS description: phosphorylase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K02E11.4 K02E11.4 P W All gene names: K02E11.4; 5O728; CE11650; WBGene00010513; WP:CE11650
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

K02E11.6 K02E11.6 P W All gene names: K02E11.6; 5O731; CE37980; WBGene00010515; WP:CE37980
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

K02E11.7 K02E11.7 P W All gene names: K02E11.7; 5O734; CE37981; WBGene00010516; WP:CE37981
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

K02E2.4 K02E2.4 P W All gene names: ins-35; K02E2.4; 5U845; CE18839; NM_075525; WBGene00002118; WP:CE18839 WormBase description: ins-35 encodes one of several insulin-related peptides.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

K02F3.4 K02F3.4 P W All gene names: zip-2; K02F3.4; K02F3.4.1; K02F3.4.2; 3B453; CE23848; WBGene00019327; WP:CE23848
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K03A1.4 K03A1.4 P W All gene names: K03A1.4; CE04712; CE39580; WBGene00019352; WP:CE04712; WP:CE39580; XH914 WormBase description: calmodulin calcium-binding sites
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order, Wang                            
                                              et al 2003  S7 SAGE genes in the dataset, Wang et al                               
                                              2003  S8 SAGE genes in the dauer exit                                              

K03B8.9 K03B8.9 P W All gene names: deg-3; K03B8.9; K03B8.9.1; K03B8.9.2; 5L894; CE06083; NM_073496; WBGene00000951; WP:CE06083 WormBase description: deg-3 encodes an alpha subunit of a nicotinic acetylcholine receptor (nAChR); originally defined by a gain-of-function mutation that results in neuronal degeneration and uncoordinated movement, DEG-3 can form heteromeric channels with a second alpha subunit, DES-2, and in vivo these channels appear to be required for chemosensation of choline; deg-3 and des-2 reside in an operon, and consistent with their role in metabolite chemosensation, are expressed in nonsynaptic regions such as the sensory endings of the IL2 chemosensory neurons; DEG-3 and DES-2 are also detected in the touch cell neurons, M1 head muscles, FLP and PVD sensory neurons, and the PVC interneuron; in subsets of these neurons, DEG-3 expression is not detectable in mec-3 or unc-86 mutant backgrounds. WormBase CDS description: nicotinic acetylcholine receptor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

K03H1.4 K03H1.4 P W All gene names: K03H1.4; 3L17; CE00475; WBGene00010539; WP:CE00475 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              McElwee et al 2003  T1 targets of                                 
                                              daf-16, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched, Zhang et al 2002, T1 mec-3 dependent                               
                                              genes, Zhang et al. 2002, Fig2b overexpressed in                                   
                                              mec-3MT                                                                            

K04B12.1 K04B12.1 P W All gene names: plx-2; K04B12.1; 2O704; CE35575; NM_064600; WBGene00004048; WP:CE35575
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

K04G2.7 K04G2.7 P W All gene names: K04G2.7; 1I622; CE38203; WBGene00010566; WP:CE38203
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 LateList, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

K05C4.9 K05C4.9 P W All gene names: K05C4.9; 1P318; CE19977; WBGene00010585; WP:CE19977 WormBase description: Leucine Rich Repeat (2 copies) (3 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005 S2 Resveratrol regulate WT                                 

K06A4.1 K06A4.1 P W All gene names: nas-3; K06A4.1; 5J959; CE35894; NM_073044; WBGene00003522; WP:CE35894 WormBase description: zinc metalloprotease
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

K06A4.3 K06A4.3 P W All gene names: K06A4.3; K06A4.3.1; K06A4.3.2; 5J979; CE06107; WBGene00010593; WP:CE06107 WormBase description: gelsolin
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K07A3.2 K07A3.2 P W All gene names: ptr-12; K07A3.2; 1D158; CE39591; CE39592; WBGene00004226; WP:CE39591; WP:CE39592
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

K07E1.1 K07E1.1 P W All gene names: K07E1.1; 2E841; CE39745; WBGene00019489; WP:CE39745
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

K07E8.3 K07E8.3 P W All gene names: sdz-24; K07E8.3; 2A949; CE29512; WBGene00019495; WP:CE29512
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , Reinke et al 2004, list of genes                              
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, herm soma enriched                               
                                              genes, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S3  genes pass one-way ANOVA, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

K08B4.4 K08B4.4 P W All gene names: ugt-20; K08B4.4; 4G846; CE18033; WBGene00019516; WP:CE18033 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

K08B4.6 K08B4.6 P W All gene names: cli-2; cpi-1; K08B4.6; 4G858; CE18035; NM_068514; WBGene00000535; WP:CE18035 WormBase description: cli-2 encodes a homolog of cysteine protease inhibitors (cystatins); cli-2 is at least superficially dispensable for viability and gross morphology. WormBase CDS description: protease inhibitor
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K08C7.2 K08C7.2 P W All gene names: fmo-1; fmo-11; K08C7.2; K08C7.2.1; K08C7.2.2; K08C7.2.3; 4L427; CE31710; NM_069567; WBGene00001476; WP:CE31710 WormBase description: The fmo-11 gene encodes a flavin-containing monoxygenase; fmo-11 is homologous to the human genes FMO1, FMO2, and FMO3, which when mutated lead to trimethylaminuria (OMIM:602079). WormBase CDS description: flavin-containing monoxygenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, GO categories, Reinke et al 2004, fem3                                    
                                              enriched genes                                                                     

K08D8.2 K08D8.2 P W All gene names: K08D8.2; 4N667; CE21041; WBGene00010656; WP:CE21041
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

K08F4.4 K08F4.4 P W All gene names: glt-3; K08F4.4; 4K897; CE06152; NM_069443; WBGene00001621; WP:CE06152 WormBase description: glt-3 encodes an ortholog of glutamate/aspartate and neutral amino acid transporters. WormBase CDS description: excitatory amino acid transporter 2 like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K09A9.1 K09A9.1 P W All gene names: K09A9.1; CE33670; WBGene00010700; WP:CE33670; XQ229 WormBase description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

K09A9.2 K09A9.2 P W All gene names: rab-14; K09A9.2; K09A9.2.1; K09A9.2.2; CE11974; NM_078171; WBGene00004276; WP:CE11974; XQ224 WormBase description: rab-14 encodes a member of the Rab GTPase family. WormBase CDS description: RAS-related protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, GO                                  
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

K10D3.2 K10D3.2 P W All gene names: unc-14; K10D3.2; 1H700; CE25055; NM_059617; WBGene00006753; WP:CE25055 WormBase description: The unc-14 gene encodes an activity required for both axonogenesis and sex myoblast migration.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Roy et al 2002  S3 muscle genes                                             

K11E4.2 K11E4.2 P W All gene names: K11E4.2; CE34056; WBGene00010774; WP:CE34056; XO337 WormBase description: Src homology domain 2
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes                                 

K11G9.4 K11G9.4 P W All gene names: egl-46; K11G9.4; 5H160; CE07377; NM_072293; WBGene00001210; WP:CE07377 WormBase description: egl-46 encodes a predicted transcription factor and conserved member of a TFIIA-like zinc finger protein family that affects coordinated locomotion, morphology and process formation of the touch cells, male mating efficiency, HSN cell migration, differentiation, and axonal outgrowth, serotonin production and also affects terminal divisions of the Q neuroblasts; acts to inhibit touch cell fate in FLP cells together with egl-44 and is expressed dynamically in neurons, specifically in touch cells, FLP, and HSN neurons. WormBase CDS description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Portman et al 2004  T1 newly                                 
                                              found ray-genes in25c, Portman et al 2004  T1 25                                   
                                              candidate ray genes, Reinke et al 2004, list of genes                              
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol                                                                        

M01D1.2 M01D1.2 P W All gene names: math-34; M01D1.2; 2B323; CE32698; CE35998; WBGene00019699; WP:CE32698; WP:CE35998
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

M01H9.4 M01H9.4 P W All gene names: M01H9.4; 4F244; CE39601; WBGene00019720; WP:CE39601
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

M02D8.4 M02D8.4 P W All gene names: M02D8.4; M02D8.4b.1; M02D8.4b.2; M02D8.4b.3; CE04760; CE31201; CE37263; WBGene00019730; WP:CE04760; WP:CE31201; WP:CE37263; XJ368 WormBase description: asparagine synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Murphy et al 2003  Fig2 Class1 elongate                                  
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

M02H5.1 M02H5.1 P W All gene names: nhr-99; M02H5.1; 5A955; CE25947; NM_070813; WBGene00003689; WP:CE25947 WormBase description: nhr-99 encodes a member of the superfamily of nuclear receptors, which is one of the most abundant class of transcriptional regulators; nuclear receptors have a well conserved DNA binding domain and a less conserved C-terminal ligand binding domain.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b TF                                              

M03D4.4 M03D4.4 P W All gene names: M03D4.4; M03D4.4b.1; M03D4.4b.2; 4G888; CE29432; CE37783; WBGene00019751; WP:CE29432; WP:CE37783 WormBase description: zinc-finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

M03F8.4 M03F8.4 P W All gene names: M03F8.4; 5G411; CE12378; WBGene00019763; WP:CE12378
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 TransientList, Wang et al                               
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

M04G12.2 M04G12.2 P W All gene names: cpz-2; M04G12.2; 5N863; CE12424; NM_073917; WBGene00000789; WP:CE12424 WormBase description: cysteine protease
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

M04G12.4 M04G12.4 P W All gene names: M04G12.4; M04G12.4b.1; M04G12.4b.2; M04G12.4b.3; 5N866; CE36495; CE36496; WBGene00010868; WP:CE36495; WP:CE36496 WormBase description: Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

M04G7.1 M04G7.1 P W All gene names: M04G7.1; 4B209; CE17190; WBGene00019772; WP:CE17190
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order, Wang                            
                                              et al 2003  S7 SAGE genes in the dataset, Wang et al                               
                                              2003  S8 SAGE genes in the dauer exit                                              

M05D6.5 M05D6.5 P W All gene names: M05D6.5; M05D6.5.1; M05D6.5.2; 2I770; CE03503; WBGene00010878; WP:CE03503
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, Shen et al                              
                                              2005  T1 hif-1 depend hypoxia, ViswanathanM et al 2005                             
                                              S2 sir-2.1 regulated                                                               

M117.1 M117.1 P W All gene names: M117.1; 4M583; CE32910; WBGene00010918; WP:CE32910 WormBase description: sodium/phosphate transporter
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

M163.3 M163.3 P W All gene names: his-24; M163.3; CE12450; HH1; NM_078009; WBGene00001898; WP:CE12450; XP109 WormBase description: The his-24 gene encodes a histone H1 isoform (H1.1) that is essential for chromatin silencing and germline development. WormBase CDS description: histone H1
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              Reinke et al 2004, IVb male soma enriched genes                                    

M176.7 M176.7 P W All gene names: kin-16; M176.7; 2J724; CE12472; NM_063616; WBGene00002200; WP:CE12472 WormBase description: kin-16 encodes a predicted receptor protein tyrosine kinase; like kin-15, with which it is cotranscribed, kin-16 encodes a protein that displays some unusual features, including a very small extracellular domain (50 amino acids) that lacks a cysteine-rich region typical of ligand-binding domains of known receptor tyrosine kinases, an unusual amino acid substitution in the subdomain VI motif, and a lack of typical autophosphorylation sites in the kinase insert and C-terminal domains; genetic analysis suggests that kin-16 may be required for normal rates of larval development and for fecundity; a kin-16 reporter is first detected in young L1 larvae in the hypodermal cells that make up the hyp7 syncytium; later expression is detected in ventral and lateral cells that fuse with hyp7 as well as in the more anterior hyp6 syncytium; this distinct expression pattern suggests that kin-16 may also play a role in development of the hypodermal syncytium and perhaps be involved in cell-cell interactions regulating cell fusion during postembryonic development. WormBase CDS description: tyrosine-protein kinase (KIN15/KIN16 subfamily) (2 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

M18.2 M18.2 P W All gene names: dlc-2; M18.2; 4M876; CE36658; NM_069897; WBGene00010888; WP:CE36658 WormBase description: dynein like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

R03H4.7 R03H4.7 P W All gene names: srsx-20; R03H4.7; 5J504; CE07410; WBGene00019853; WP:CE07410
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

R05A10.2 R05A10.2 P W All gene names: R05A10.2; 4O943; CE16288; WBGene00011019; WP:CE16288
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes                             

R05D8.8 R05D8.8 P W All gene names: dhs-14; R05D8.8; 5D242; CE23899; NM_071351; WBGene00000977; WP:CE23899 WormBase description: dhs-14 encodes a short chain-type of alcohol/other dehydrogenase, more similar to 18 paralogs in C. elegans than to any non-worm protein; it is dispensable for viability and gross morphology in mass RNAi screens. WormBase CDS description: alcohol dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

R06F6.11 R06F6.11 P W All gene names: tag-209; R06F6.11; 2L77; CE01617; WBGene00011072; WP:CE01617
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

R07B7.5 R07B7.5 P W All gene names: R07B7.5; 5M550; CE06267; WBGene00011089; WP:CE06267 WormBase description: Monooxygenase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order,                                        
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R07B7.6 R07B7.6 P W All gene names: R07B7.6; 5M554; CE37399; WBGene00011090; WP:CE37399 WormBase description: acetylglucosaminyltransferase-like domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

R07C12.1 R07C12.1 P W All gene names: R07C12.1; 4E919; CE17204; WBGene00019931; WP:CE17204
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

R07C12.3 R07C12.3 P W All gene names: R07C12.3; 4E909; CE17206; WBGene00019933; WP:CE17206
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

R07E4.3 R07E4.3 P W All gene names: R07E4.3; CE04818; WBGene00019937; WP:CE04818; XG573
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

R07G3.2 R07G3.2 P W All gene names: R07G3.2; 2H899; CE36003; WBGene00019939; WP:CE36003 WormBase description: Lipase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

R07G3.8 R07G3.8 P W All gene names: R07G3.8; 2H910; CE02027; WBGene00019944; WP:CE02027
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

R08F11.3 R08F11.3 P W All gene names: cyp-33C8; R08F11.3; 5E272; CE12584; NM_071650; WBGene00019967; WP:CE12584 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

R09A8.5 R09A8.5 P W All gene names: R09A8.5; CE03541; WBGene00011154; WP:CE03541; XN256
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S7 SAGE genes in the dataset, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit                                                    

R107.1 R107.1 P W All gene names: indy-3; nac-2; nat-1; R107.1; R107.1.1; R107.1.2; 3K130; CE33536; NM_066599; WBGene00003518; WP:CE33536
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

R10H1.1 R10H1.1 P W All gene names: R10H1.1; 2H785; CE31820; NM_063167; WBGene00019998; WP:CE31820 WormBase description: trypsin inhibitor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

R11E3.5 R11E3.5 P W All gene names: nhr-104; R11E3.5; 4F550; CE31719; CE31720; CE37269; NM_171326; NM_171327; WBGene00003694; WP:CE31719; WP:CE31720; WP:CE37269 WormBase description: nhr-104 encodes a member of the superfamily of nuclear receptors, which is one of the most abundant class of transcriptional regulators; nuclear receptors have a well conserved DNA binding domain and a less conserved C-terminal ligand binding domain.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

R12E2.14 R12E2.14 P W All gene names: R12E2.14; 1E719; CE18146; WBGene00020039; WP:CE18146
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

R12E2.15 R12E2.15 P W All gene names: R12E2.15; 1E716; CE18147; WBGene00020040; WP:CE18147
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

R12E2.7 R12E2.7 P W All gene names: R12E2.7; 1E722; CE18139; WBGene00020033; WP:CE18139
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

R13A5.6 R13A5.6 P W All gene names: R13A5.6; 3I654; CE01378; WBGene00020049; WP:CE01378
                                              
Member of lists (Publications lists):
                                              Bishop et al 2004  T4 57 vhl-1 depend                             
                                              hif-1 indep, Reinke et al 2004, list of genes in                                   
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

R13F6.9 R13F6.9 P W All gene names: sma-3; R13F6.9; 3H952; CE25974; NM_066092; WBGene00004857; WP:CE25974
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

R13H4.5 R13H4.5 P W All gene names: R13H4.5; R13H4.5.1; R13H4.5.2; 5M341; CE12808; WBGene00011263; WP:CE12808 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Murphy et al 2003  Fig2 Class1 elongate                                    
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S7 SAGE genes in the dataset, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit                                                    

R153.1 R153.1 P W All gene names: pde-4; R153.1; 2H918; CE02038; CE28641; CE32060; CE33438; CE33439; CE33440; CE39396; NM_063199; NM_063200; NM_182144; NM_182145; NM_182146; NM_182147; WBGene00020114; WP:CE02038; WP:CE28641; WP:CE32060; WP:CE33438; WP:CE33439; WP:CE33440; WP:CE39396 WormBase description: cyclic nucleotide phosphodiesterase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

R186.1 R186.1 P W All gene names: R186.1; 5N442; CE12870; WBGene00011305; WP:CE12870
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

R90.1 R90.1 P W All gene names: R90.1; 5N372; CE06325; WBGene00011283; WP:CE06325 WormBase description: casein Kinase I
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

R90.2 R90.2 P W All gene names: R90.2; 5N384; CE06326; WBGene00011284; WP:CE06326 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

R90.3 R90.3 P W All gene names: R90.3; 5N386; CE06327; WBGene00011285; WP:CE06327 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T01D1.4 T01D1.4 P W All gene names: T01D1.4; 2A468; CE12948; WBGene00020149; WP:CE12948
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T01E8.1 T01E8.1 P W All gene names: T01E8.1; T01E8.1.1; T01E8.1.2; 2K499; CE32922; WBGene00011331; WP:CE32922
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T02B11.3 T02B11.3 P W All gene names: T02B11.3; 5B344; CE33300; CE33301; WBGene00020155; WP:CE33300; WP:CE33301
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T02B11.4 T02B11.4 P W All gene names: T02B11.4; T02B11.4.1; T02B11.4.2; 5B348; CE33302; WBGene00020156; WP:CE33302
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T02C5.1 T02C5.1 P W All gene names: T02C5.1; CE04848; CE30117; WBGene00020158; WP:CE04848; WP:CE30117; XD315 WormBase description: The T02C5.1 gene encodes a protein that may be involved in apoptosis; it has some similarity to the tumor necrosis factor (TNF) receptor of vertebrates.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T02C5.5 T02C5.5 P W All gene names: unc-2; T02C5.5; T02C5.5d.1; T02C5.5d.2; T02C5.5d.3; CE29459; CE31225; CE34591; CE34980; NM_171638; NM_171639; NM_171942; WBGene00006742; WP:CE29459; WP:CE31225; WP:CE34591; WP:CE34980; XD330 WormBase description: unc-2 encodes a calcium channel alpha subunit required for desensitization to dopamine, normal flexion and speed during movement, normally low sensitivity of whole animals to serotonin, and neuronal migrations promoted by humoral serotonin; UNC-2 is orthologous to human CACNA1A (OMIM:601011, mutated in familiar hemiplegic migraine or episodic ataxia 2) and to Drosophila CACOPHONY; UNC-2 is expressed primarily in motor neurons, several sensory neurons, and HSN and VC neurons controlling egg-laying.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

T02G5.2 T02G5.2 P W All gene names: T02G5.2; 2H385; CE39397; WBGene00020162; WP:CE39397
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated                                                   

T03D8.3 T03D8.3 P W All gene names: sbt-1; T03D8.3; 5V298; CE18921; WBGene00011392; WP:CE18921 WormBase description: neuroendocrine protein 7B2
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              neuronal, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order, Wang                            
                                              et al 2003  S5 genes common to feeding ANOVA, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA                                              

T03F6.4 T03F6.4 P W All gene names: T03F6.4; 3O477; CE32483; WBGene00011400; WP:CE32483
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T03F7.1 T03F7.1 P W All gene names: snf-11; T03F7.1; T03F7.1.1; T03F7.1.2; 5L784; CE06344; NM_073472; WBGene00004910; WP:CE06344 WormBase description: Na(+)/Cl(-)-dependent GABA transporter
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S5 genes common to                                   
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

T03G11.1 T03G11.1 P W All gene names: pqn-62; T03G11.1; CE31226; NM_076482; WBGene00004145; WP:CE31226; XF821 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T03G11.8 T03G11.8 P W All gene names: zig-6; T03G11.8; CE39763; NM_076481; WBGene00006983; WP:CE39763; XF804 WormBase description: zig-6 encodes a predicted membrane-associated protein containing two C2-type immunoglobulin domains and a GPI (glycosylated phosphatidylinositol) anchor site, but no transmembrane domain; ZIG-6 is predicted to function in cell adhesion and/or signaling, and as loss of zig-6 activity via RNA-mediated interference results in a Clear phenotype, zig-6 appears also to be required for maintenance of body fluid homeostasis; ZIG-6 is expressed in anterior and posterior body wall muscles. WormBase CDS description: human leukocyte surface protein (weak)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Adhesion, Wang et al                            
                                              2003  S4 Early genes, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

T04A6.1 T04A6.1 P W All gene names: T04A6.1; 3I725; CE31585; CE31586; WBGene00020200; WP:CE31585; WP:CE31586
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T04A8.4 T04A8.4 P W All gene names: tag-243; T04A8.4; 3F776; CE39625; WBGene00011406; WBGene00044078; WP:CE39625
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T04C12.3 T04C12.3 P W All gene names: T04C12.3; T04C12.3.1; T04C12.3.2; 5L544; CE13146; WBGene00011428; WP:CE13146
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T05A6.1 T05A6.1 P W All gene names: cki-1; T05A6.1; 2I101; CE03628; NM_063240; WBGene00000516; WP:CE03628 WormBase description: cki-1 encodes a homolog of the mammalian cyclin-dependent kinase inhibitor p27/KIP1 that is required for the arrest of cell division in larval blast lineages, dauer larvae and starved L1 larvae; excess CKI-1 expression prematurely stops cell division while cki-1(RNAi) induces extra cell divisions, indicating that CKI-1 quantitatively regulates the amount of mitosis in postembryonic worms.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T05A7.4 T05A7.4 P W All gene names: hmg-11; hmg-I-alpha; T05A7.4; T05A7.4.1; T05A7.4.2; 2E963; CE04890; NM_062424; WBGene00001976; WP:CE04890 WormBase description: nuclear phosphoprotein (weak)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T05E11.2 T05E11.2 P W All gene names: T05E11.2; 4L879; CE35611; WBGene00011479; WP:CE35611 WormBase description: T05E11.2 encodes a claudin homolog that may be required for normal cohesion of apical junctions in epithelia; T05E11.2 is worm-specific, with a with highly divergent sequence lacking obvious homologs; T05E11.2 has no obvious function in mass RNAi assays; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T05E12.3 T05E12.3 P W All gene names: T05E12.3; 5R558; CE23948; WBGene00011486; WP:CE23948
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

T05F1.11 T05F1.11 P W All gene names: T05F1.11; 1K231; CE32486; WBGene00011495; WP:CE32486 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes,                                
                                              Reinke et al 2004, GO categories, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 Climbing, Wang                             
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

T06C12.10 T06C12.10 P W All gene names: tag-217; T06C12.10; T06C12.10.1; T06C12.10.2; 5Q366; CE31986; WBGene00011517; WP:CE31986
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T06H11.1 T06H11.1 P W All gene names: unc-58; T06H11.1; CE31594; CE31595; NM_171758; NM_171759; WBGene00006792; WP:CE31594; WP:CE31595; XK722 WormBase description: unc-58 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; unc-58 was originally defined by gain-of-function (gf) mutations that result in paralysis and a shortened (dumpy) body morphology due to hypercontraction of body wall muscle; unc-58 gf mutations also result in constitutive egg-laying; as loss of UNC-58 function via reversion or RNA-mediated interference (RNAi) results in either no abnormalities or only a weakly uncoordinated phenotype, UNC-58 likely functions redudantly with other TWK channels to regulate locomotion and egg-laying; UNC-58 is expressed in motor neurons and interneurons.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 TransientList, Wang et al                               
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T07A9.3 T07A9.3 P W All gene names: kgb-1; T07A9.3; 4B160; CE29466; NM_067521; WBGene00002187; WP:CE29466 WormBase description: kgb-1 encodes a serine/threonine kinase that is a member of the JNK (Jun-N-terminal kinase) subfamily of MAP (mitogen-activated protein)kinases; loss of kgb-1 activity results in temperature-sensitive sterility in hermaphrodites and males; in hermaphrodites, this sterility is associated with disorganized gonads and endomitotic oocytes that have likely failed to undergo oocyte maturation; in kgb-1 mutant males, sperm is present, but is non-functional; KGB-1 interacts in vitro with all four C. elegans germline helicases, GLH-1, -2, -3, and -4, that localize to P granules in vivo; Northern analyses indicate that kgb-1 mRNA is present in both somatic and germline tissues. WormBase CDS description: protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T07D4.2 T07D4.2 P W All gene names: T07D4.2; 2J160; CE36406; CE36950; WBGene00011579; WP:CE36406; WP:CE36950
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order, Wang                            
                                              et al 2003  S4 TransientList, Wang et al 2003  S7 SAGE                             
                                              genes in the dataset, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S8 SAGE genes in the                               
                                              dauer exit, Wang et al 2003  S4 genes pass two-wayANOVA                            
                                              P0                                                                                 

T07F12.4 T07F12.4 P W All gene names: T07F12.4; CE28650; WBGene00020324; WP:CE28650; XF516 WormBase description: Serine/Threonine protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T08B1.3 T08B1.3 P W All gene names: alh-5; T08B1.3; 5C476; CE13415; NM_071144; WBGene00000111; WP:CE13415 WormBase description: aldehyde dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T09A5.1 T09A5.1 P W All gene names: cex-2; T09A5.1; 2I120; CE35904; CE35905; NM_063244; WBGene00011632; WBGene00023408; WP:CE35904; WP:CE35905 WormBase description: calcium binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b others, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

T09B4.4 T09B4.4 P W All gene names: T09B4.4; 1G745; CE36196; WBGene00020378; WP:CE36196
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T09B4.6 T09B4.6 P W All gene names: T09B4.6; 1G732; CE13467; WBGene00020380; WP:CE13467 WormBase description: SER/THR-protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T10B10.4 T10B10.4 P W All gene names: T10B10.4; CE31604; WBGene00011681; WP:CE31604; XP811
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S6 removed genes of contamination                                         

T10C6.13 T10C6.13 P W All gene names: his-2; T10C6.13; 5Q522; CE03253; NM_074632; WBGene00001876; WP:CE03253 WormBase description: his-2 encodes an H3 histone; his-2 is contained within the histone gene cluster HIS1. WormBase CDS description: histone H3
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma                                            

T10C6.14 T10C6.14 P W All gene names: his-1; T10C6.14; 5Q523; CE03252; NM_074633; WBGene00001875; WP:CE03252 WormBase description: his-1 encodes an H4 histone; his-1 is contained within the histone gene cluster HIS1; transcript analysis suggests that it encodes the major class of H4 transcripts. WormBase CDS description: histone H4
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

T11B7.3 T11B7.3 P W All gene names: col-118; T11B7.3; 4J613; CE03649; NM_069131; WBGene00000692; WP:CE03649 WormBase description: cuticle collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T13A10.4 T13A10.4 P W All gene names: T13A10.4; WBGene00043500
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

T13A10.5 T13A10.5 P W All gene names: nlp-16; T13A10.5; 4H20; CE31727; CE35009; WBGene00003754; WP:CE31727; WP:CE35009 WormBase description: nlp-16 encodes a predicted neuropeptide that does not belong to a multigene family in C. elegans and is not clearly related to well-characterized neuropeptides; the peptide encoded by nlp-16 has been isolated from Ascaris suum.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T13H5.3 T13H5.3 P W All gene names: T13H5.3; 2I813; CE36953; WBGene00011757; WP:CE36953 WormBase description: chitinase-like repeats
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 LateList, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

T14A8.2 T14A8.2 P W All gene names: T14A8.2; 4I586; CE29475; WBGene00020497; WP:CE29475
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T14B4.4 T14B4.4 P W All gene names: tsp-10; T14B4.4; T14B4.4b.1; T14B4.4b.2; 2H9; CE02047; CE39776; NM_062968; WBGene00006636; WP:CE02047; WP:CE39776 WormBase description: transpanin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

T14B4.5 T14B4.5 P W All gene names: T14B4.5; 2H7; CE02048; WBGene00020501; WP:CE02048
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T14F9.4 T14F9.4 P W All gene names: peb-1; T14F9.4; T14F9.4a.1; T14F9.4a.2; CE07500; CE34372; WBGene00003968; WP:CE07500; WP:CE34372; XC837
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T16H12.5 T16H12.5 P W All gene names: bath-43; T16H12.5; T16H12.5b.1; T16H12.5b.2; T16H12.5b.3; 3L182; CE00510; CE29054; WBGene00011815; WP:CE00510; WP:CE29054 WormBase description: The T16H12.5 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis. WormBase CDS description: Kruppel-like zinc finger protein (outside zinc fingers)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Shen et al 2005  T1 hif-1indepen                                    
                                              hypoxia, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T18D3.8 T18D3.8 P W All gene names: T18D3.8; CE03669; WBGene00011825; WP:CE03669; XN55
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                               
                                              Wang et al 2003  S4 TransientList, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T19B4.1 T19B4.1 P W All gene names: T19B4.1; 1G275; CE39282; WBGene00020556; WP:CE39282 WormBase description: monooxygenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T19C3.3 T19C3.3 P W All gene names: T19C3.3; 3B228; CE30183; WBGene00020561; WP:CE30183
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 LateList, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

T19C4.1 T19C4.1 P W All gene names: T19C4.1; 5L629; CE06465; WBGene00011838; WP:CE06465
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S3  genes pass one-way ANOVA, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

T19D12.3 T19D12.3 P W All gene names: T19D12.3; 2G951; CE04978; WBGene00020578; WP:CE04978
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, list of genes in cluster A, Reinke et al                               
                                              2004, list of genes in cluster order                                               

T20D4.11 T20D4.11 P W All gene names: T20D4.11; 5D875; CE13800; WBGene00020617; WP:CE13800
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

T20D4.12 T20D4.12 P W All gene names: T20D4.12; 5D873; CE39631; WBGene00020618; WP:CE39631
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T20F5.4 T20F5.4 P W All gene names: T20F5.4; 1E482; CE13822; WBGene00020626; WP:CE13822
                                              
Member of lists (Publications lists):
                                              Bishop et al 2004  T1 Upregulated in                              
                                              vhl-1 vs WT, Reinke et al 2004, list of genes in                                   
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T22B7.2 T22B7.2 P W All gene names: T22B7.2; WBGene00043516
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T22B7.3 T22B7.3 P W All gene names: T22B7.3; CE31242; WBGene00020672; WP:CE31242; XG273
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, IVb male soma enriched genes, Romagnolo et al                             
                                              2002  Fig3b Unkown                                                                 

T22C8.3 T22C8.3 P W All gene names: T22C8.3; 2I912; CE02351; WBGene00011924; WP:CE02351 WormBase description: Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T22C8.6 T22C8.6 P W All gene names: T22C8.6; 2I918; CE02354; WBGene00011927; WP:CE02354
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T22C8.7 T22C8.7 P W All gene names: T22C8.7; 2I920; CE02355; WBGene00011928; WP:CE02355 WormBase description: cuticulin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T22C8.8 T22C8.8 P W All gene names: vab-9; T22C8.8; 2I924; CE32938; NM_063435; WBGene00006875; WP:CE32938 WormBase description: vab-9 encodes a claudin homolog orthologous to human brain cell membrane protein 1 (BCMP1) and Drosophila CG6982; VAB-9 colocalizes with HMP-1 to an apical layer of the adherens junctions of all epithelial cells, one layer more apically than AJM-1; vab-9 mutants have disorganized F-actin at the adherens junction, implying that VAB-9 links junctions to circumferential actin filaments; VAB-9 is also expressed in the nerve ring; VAB-9 requires the cadherin HMR-1 to localize to the cell membrane, and both alpha-catenin (HMP-1) and beta-catenin (HMP-2) to remain at the cell junction after membrane localization.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

T22F3.8 T22F3.8 P W All gene names: T22F3.8; 5E82; CE13976; WBGene00020698; WP:CE13976
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T23C6.3 T23C6.3 P W All gene names: T23C6.3; T23C6.3.1; T23C6.3.2; CE07528; WBGene00020725; WP:CE07528; XR750
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T23C6.4 T23C6.4 P W All gene names: T23C6.4; CE07529; WBGene00020726; WP:CE07529; XR762
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T23F11.3 T23F11.3 P W All gene names: cdka-1; T23F11.3; T23F11.3.1; T23F11.3.2; 3F753; CE33707; WBGene00011955; WP:CE33707
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

T23F4.2 T23F4.2 P W All gene names: T23F4.2; 2B455; CE32070; WBGene00020740; WP:CE32070
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T23H2.2 T23H2.2 P W All gene names: snt-4; T23H2.2; 1H17; CE30456; NM_059452; WBGene00004924; WP:CE30456 WormBase description: C2 domain protein
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              ViswanathanM et al 2005 S2 Resveratrol regulate WT,                                
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

T23H2.5 T23H2.5 P W All gene names: rab-10; T23H2.5; 1H34; CE14114; NM_059456; WBGene00004273; WP:CE14114 WormBase description: RAS
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

T24B8.3 T24B8.3 P W All gene names: T24B8.3; T24B8.3a.1; T24B8.3a.2; T24B8.3b.1; T24B8.3b.2; 2J350; CE35910; CE35911; WBGene00011977; WP:CE35910; WP:CE35911
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T24D8.5 T24D8.5 P W All gene names: nlp-2; T24D8.5; CE05009; NM_076025; WBGene00003740; WP:CE05009; XC960
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, list of genes in                                 
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

T24F1.3 T24F1.3 P W All gene names: T24F1.3; T24F1.3b.1; T24F1.3b.2; T24F1.3b.3; 2L601; CE02363; CE38227; WBGene00011995; WP:CE02363; WP:CE38227 WormBase description: DAG binding domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T25F10.2 T25F10.2 P W All gene names: cet-1; dbl-1; T25F10.2; T25F10.2.1; T25F10.2.2; 5H239; CE26386; NM_072308; WBGene00000936; WP:CE26386 WormBase description: dbl-1 encodes a member of the transforming growth factor beta (TGFbeta) superfamily that includes Drosophila decapentaplegic (Dpp) and the vertebrate bone morphogenetic proteins (BMPs); DBL-1 functions as a dose-dependent ligand for the SMA-6 and DAF-4 TGFbeta receptors that ultimately activate the SMA-2, -3, and -4 complex of transcription factors to regulate body length and size, as well as the patterning of male sensory rays and copulatory spicules; DBL-1 signaling upregulates sma-6 expression, suggesting that there is positive autoregulation in the DBL-1 signaling pathway; in contrast, DBL-1 negatively regulates expression of LON-1, a predicted secreted protein that is a downstream component of the body size pathway; DBL-1 is expressed primarily in neurons. WormBase CDS description: TGF-beta-like growth factor
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

T25G12.7 T25G12.7 P W All gene names: dhs-30; T25G12.7; CE37275; NM_078392; WBGene00000993; WP:CE37275; XR846 WormBase description: dhs-30 encodes a member of the short-chain dehydrogenases/reductases family (SDR) homologous to HSD, which when mutated leads to cortisol 11-beta ketoreductase deficiency (OMIM:218030). WormBase CDS description: dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T27A1.3 T27A1.3 P W All gene names: T27A1.3; 2A827; CE14209; WBGene00020835; WP:CE14209 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T27A1.4 T27A1.4 P W All gene names: T27A1.4; 2A819; CE14211; WBGene00020836; WP:CE14211 WormBase description: ionic channel protein
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , Reinke et al 2004, list of genes                              
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

T27A10.2 T27A10.2 P W All gene names: T27A10.2; CE07552; WBGene00020844; WP:CE07552; XE205
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T27D12.1 T27D12.1 P W All gene names: T27D12.1; T27D12.1.1; T27D12.1.2; T27D12.1.3; 2M135; CE06516; WBGene00012085; WP:CE06516 WormBase description: sodium/phosphate transporter
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

T28A11.2 T28A11.2 P W All gene names: T28A11.2; 5D755; CE20109; WBGene00020869; WP:CE20109
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

T28A11.6 T28A11.6 P W All gene names: T28A11.6; 5D739; CE39636; WBGene00020873; WP:CE39636
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T28D9.7 T28D9.7 P W All gene names: T28D9.7; 2G766; CE37157; WBGene00020897; WP:CE37157 WormBase description: degenerin
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              neuronal, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, mixed sperm soma, ViswanathanM et al 2005  S2                                
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, ViswanathanM et al 2005 S2 Resveratrol                                  
                                              regulate WT, Wang et al 2003  S4 TransientList, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Early genes, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

T28F2.3 T28F2.3 P W All gene names: cah-6; T28F2.3; 1E197; CE14355; NM_058788; WBGene00000284; WP:CE14355 WormBase description: cah-6 encodes a predicted carbonic anhydrase. WormBase CDS description: carbonic anhydrase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, GO categories, Reinke et al                                
                                              2004, IVb male soma enriched genes                                                 

T28F2.5 T28F2.5 P W All gene names: ccb-1; T28F2.5; 1E210; CE39788; NM_058792; WBGene00000368; WP:CE39788 WormBase description: ccb-1 encodes a homolog of the beta subunits of dihydropyridine sensitive L-type calcium channels that, in RNAi screens, is dispensable for viability or grossly normal morphology; a mutant allele of ccb-1 exists, but its phenotype has not yet been described. WormBase CDS description: calcium channel subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

T28F4.2 T28F4.2 P W All gene names: asic-2; T28F4.2; 1I59; CE06524; NM_059698; WBGene00012137; WP:CE06524 WormBase description: mechanosensory protein like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, IVb male soma enriched genes, Reinke                            
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

W01A8.6 W01A8.6 P W All gene names: W01A8.6; 1H648; CE06536; WBGene00012168; WP:CE06536 WormBase description: carboxypeptidase b like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

W01C9.3 W01C9.3 P W All gene names: pqn-73; W01C9.3; 2I835; CE02369; NM_063403; WBGene00004155; WP:CE02369 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

W02C12.1 W02C12.1 P W All gene names: W02C12.1; 4E777; CE14412; WBGene00020928; WP:CE14412 WormBase description: EGF-like protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

W02D9.10 W02D9.10 P W All gene names: W02D9.10; 1N143; CE14472; WBGene00012216; WP:CE14472
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, Lund et al 2002  Fig4 Mount 15, Reinke et                             
                                              al 2004, list of genes in cluster A, Reinke et al 2004,                            
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt herm enriched gen, Reinke et al 2004, IVb                               
                                              male soma enriched genes, Shen et al 2005  T1                                      
                                              hif-1indepen hypoxia, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol, ViswanathanM et al 2005  Fig6A                                 
                                              Ethanol HS, Wang et al 2003  S3  genes pass one-way                                
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

W02D9.6 W02D9.6 P W All gene names: W02D9.6; 1N152; CE14464; WBGene00012212; WP:CE14464
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster A,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S6 removed genes of contamination                                         

W03C9.5 W03C9.5 P W All gene names: W03C9.5; 2M258; CE03779; WBGene00012221; WP:CE03779
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

W03F11.1 W03F11.1 P W All gene names: W03F11.1; 1C788; CE14542; WBGene00021005; WP:CE14542
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes,                                
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

W03G1.7 W03G1.7 P W All gene names: asm-3; W03G1.7; 4B274; CE31626; CE39794; NM_067539; WBGene00000213; WP:CE31626; WP:CE39794 WormBase description: sphingomyelin phosphodiesterase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

W04A8.4 W04A8.4 P W All gene names: W04A8.4; 1O434; CE16538; WBGene00012239; WP:CE16538
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

W04B5.6 W04B5.6 P W All gene names: W04B5.6; 3D522; CE20143; WBGene00021023; WP:CE20143
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

W05E10.3 W05E10.3 P W All gene names: ceh-32; W05E10.3; W05E10.3.1; W05E10.3.2; 5M182; CE29364; NM_073557; WBGene00000453; WP:CE29364 WormBase description: ceh-32 encodes a Six/sine oculis-type homeodomain protein most closely related to the Six3/6 subfamily that contains Drosophila OPTIX and human SIX3 (OMIM:603714, which when mutated leads to holoprosencephaly 2); CEH-32 appears to be essential for development and required for proper head morphogenesis; during embryogenesis, CEH-32 is expressed in hypodermal and neuronal precursors, and at later stages, in the descendants of these cells and in gonadal sheath cells; in some hypodermal cells, ceh-32 is a direct transcriptional target of VAB-3, a PAX-6 ortholog sufficient to induce ceh-32 expression in some cell types and able to bind the ceh-32 promoter in vitro. WormBase CDS description: homeobox protein (so subfamily)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol                                                                        

W05H12.1 W05H12.1 P W All gene names: W05H12.1; 1O13; CE24031; WBGene00012289; WP:CE24031
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

W07E11.2 W07E11.2 P W All gene names: flp-3; W07E11.2; CE02373; NM_077293; WBGene00001446; WP:CE02373; XK710 WormBase description: flp-3 encodes nine copies of a GTMRFamide-containing peptide that is predicted to function as a neuropeptide that inhibits pharyngeal action potential in a manner similar to octopamine without having a significant effect on basal resting membrane potential; expressed in three pairs of neurons IL1D, OL1, URB. WormBase CDS description: FMRFamide neuropeptide repeats
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

W07G4.5 W07G4.5 P W All gene names: W07G4.5; 5N529; CE03793; WBGene00012339; WP:CE03793
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

W08D2.4 W08D2.4 P W All gene names: fat-3; W08D2.4; 4K569; CE25153; NM_069351; WBGene00001395; WP:CE25153 WormBase description: The fat-3 gene encodes a delta-6 fatty acid desaturase ('linoleoyl-CoA desaturase') containing an N-terminal cytochrome b5 domain; FAT-3 expressed in yeast uses linoleic and alpha-linolenic acid as substrates; FAT-3 is absolutely required in vivo for synthesis of delta-6 fatty acids, and also required for fully normal synthesis of C20 fatty acids; FAT-3 is required for a normally fast growth rate and movement speed, and for normal defecation rhythms and fertility.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y105C5A.13 Y105C5A.13 P W All gene names: Y105C5A.13; 4Q407; CE36217; WBGene00013637; WP:CE36217
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster A,                              
                                              Reinke et al 2004, list of genes in cluster order                                  

Y105C5A.24 Y105C5A.24 P W All gene names: Y105C5A.24; 4Q615; CE36218; WBGene00013643; WP:CE36218
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S3  genes pass one-way ANOVA, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

Y105E8B.7 Y105E8B.7 P W All gene names: Y105E8B.7; 1P239; CE24095; WBGene00013692; WP:CE24095
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y110A2AL.4 Y110A2AL.4 P W All gene names: Y110A2AL.4; 2D131; CE33472; CE33473; WBGene00022441; WP:CE33472; WP:CE33473
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

Y116A8A.8 Y116A8A.8 P W All gene names: Y116A8A.8; 4R777; CE23311; WBGene00013778; WP:CE23311
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

Y11D7A.14 Y11D7A.14 P W All gene names: Y11D7A.14; 4K47; CE32957; WBGene00012437; WP:CE32957 WormBase description: Myosin head (motor domain)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

Y11D7A.5 Y11D7A.5 P W All gene names: Y11D7A.5; 4K8; CE20188; WBGene00012429; WP:CE20188
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

Y15E3A.4 Y15E3A.4 P W All gene names: Y15E3A.4; CE21371; WBGene00012443; WP:CE21371; XP951
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y17G7B.13 Y17G7B.13 P W All gene names: Y17G7B.13; 2M337; CE19047; WBGene00012466; WP:CE19047
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y22F5A.3 Y22F5A.3 P W All gene names: ric-4; snap-25; Y22F5A.3; 5K742; CE32008; NM_073240; WBGene00004364; WBGene00012495; WP:CE32008 WormBase description: Y22F5A.3 encodes an ortholog of vertebrate SNAP-25 and S. cerevisiae Sec9p; SNAP-25 is associated with synaptosomes, required for axonal growth in vivo, and targeted by botulinum neurotoxins; UNC-86 and MEC-3 are required for Y22F5A.3 expression, and act on a regulatory element (I2h) in Y22F5A.3 conserved between the first introns of C. elegans and C. briggsae Y22F5A.3 genes; other conserved motifs in the promoter region (P1 and P2) and first intron (I1h, I1m, I2h, and I2m) are required for Y22F5A.3 expression in DA and DD motor neurons (P1), DB and DA neurons (I1m and I2m), amphid and phasmid neurons (P2), pharyngeal neurons (I1h), and mechanosensory neurons (I2h); Y22F5A.3 has no obvious function in mass RNAi assays WormBase CDS description: SNAP-25 family
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              neuronal, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y23H5A.6 Y23H5A.6 P W All gene names: Y23H5A.6; WBGene00043564
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster A,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y23H5B.8 Y23H5B.8 P W All gene names: Y23H5B.8; 1D108; CE23004; WBGene00021279; WP:CE23004
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y36E3A.1 Y36E3A.1 P W All gene names: Y36E3A.1; 5P902; CE20205; WBGene00012533; WP:CE20205 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y37D8A.23 Y37D8A.23 P W All gene names: unc-25; Y37D8A.23; 3O37; CE20226; CE31832; CE32012; NM_067288; WBGene00006762; WP:CE20226; WP:CE31832; WP:CE32012 WormBase description: Pyridoxal-dependent decarboxylase conserved domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

Y37E11AR.4 Y37E11AR.4 P W All gene names: Y37E11AR.4; 4E504; CE21545; WBGene00021371; WP:CE21545
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, fem3 enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

Y38A10A.2 Y38A10A.2 P W All gene names: Y38A10A.2; Y38A10A.E; 5G538; CE21559; WBGene00021389; WP:CE21559
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

Y39A3B.3 Y39A3B.3 P W All gene names: Y39A3B.3; 3D75; CE32522; WBGene00021438; WP:CE32522
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y42G9A.3 Y42G9A.3 P W All gene names: Y42G9A.3; Y42G9A.D; 3H237; CE21870; CE33945; WBGene00021533; WP:CE21870; WP:CE33945
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

Y43F8B.7 Y43F8B.7 P W All gene names: Y43F8B.7; 5T963; CE21892; WBGene00012818; WP:CE21892
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y44A6D.2 Y44A6D.2 P W All gene names: Y44A6D.2; 5V259; CE19160; WBGene00012853; WP:CE19160
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen                                                                                

Y45F10A.8 Y45F10A.8 P W All gene names: Y45F10A.8; WBGene00043665
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y51A2D.11 Y51A2D.11 P W All gene names: Y51A2D.11; 5T40; CE19207; WBGene00013079; WP:CE19207 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol                                                        

Y52B11B.1 Y52B11B.1 P W All gene names: Y52B11B.1; 1L715; CE19220; WBGene00013130; WP:CE19220
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

Y54E10A.16 Y54E10A.16 P W All gene names: Y54E10A.16; Y54E10A.16a.1; Y54E10A.16a.2; 1D812; CE24445; CE33235; WBGene00021834; WP:CE24445; WP:CE33235
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y65B4BL.6 Y65B4BL.6 P W All gene names: Y65B4BL.6; 1A992; CE22747; WBGene00022038; WP:CE22747
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

Y69A2AR.5 Y69A2AR.5 P W All gene names: Y69A2AR.5; CE36371; NM_067833; WBGene00022076; WP:CE36371
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

Y69H2.9 Y69H2.9 P W All gene names: Y69H2.9; 5T183; CE22827; WBGene00013484; WP:CE22827
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y6G8.2 Y6G8.2 P W All gene names: Y6G8.2; 5S76; CE27786; WBGene00012404; WP:CE27786 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, ViswanathanM et al 2005  S2 daf-16 Resveratrol                                

Y71D11A.5 Y71D11A.5 P W All gene names: Y71D11A.5; 3C216; CE29908; WBGene00022106; WP:CE29908 WormBase description: ion channel protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y71G12B.4 Y71G12B.4 P W All gene names: Y71G12B.4; 1C283; CE26253; WBGene00022144; WP:CE26253
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y71H2AM.16 Y71H2AM.16 P W All gene names: Y71H2AM.16; 3D846; CE22949; WBGene00022181; WP:CE22949
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

Y71H2B.7 Y71H2B.7 P W All gene names: Y71H2B.7; Y71H2B.7.1; Y71H2B.7.2; 3D677; CE24633; WBGene00022196; WP:CE24633
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y71H9A.3 Y71H9A.3 P W All gene names: sto-4; Y71H9A.3; Y71H9A.3.1; Y71H9A.3.2; CE22957; NM_077543; WBGene00006066; WP:CE22957; XM265 WormBase description: Band 7 family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y73F4A.2 Y73F4A.2 P W All gene names: Y73F4A.2; 4J806; CE20368; WBGene00013515; WP:CE20368
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order, Wang                            
                                              et al 2003  S7 SAGE genes in the dataset, Wang et al                               
                                              2003  S8 SAGE genes in the dauer exit                                              

Y77E11A.2 Y77E11A.2 P W All gene names: Y77E11A.2; 4C223; CE23076; WBGene00022307; WP:CE23076
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

Y7A9A.1 Y7A9A.1 P W All gene names: Y7A9A.1; 4Q965; CE28151; WBGene00012416; WP:CE28151 WormBase description: gamma-glutamyltranspeptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y80D3A.6 Y80D3A.6 P W All gene names: Y80D3A.6; NM_075288; WBGene00043831
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

Y87G2A.4 Y87G2A.4 P W All gene names: rab-27; Y87G2A.4; 1O136; CE23130; NM_060975; WBGene00004280; WP:CE23130; rab27
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

Y95B8A.1 Y95B8A.1 P W All gene na