Gene list file name: | Reinke2004_Fig5_ClusterB.txt |
---|---|
Type of gene identifier: | Cosmid name |
Description: | Reinke et al 2004, Fig5 list of genes in cluster B |
Organism: | Caenorhabditis elegans (nematode) |
Gene list type: | Experimental |
Gene name Source Gene ID Annotation Date Added by
AC3.5 AC3.5 P W All gene names: AC3.5; 5K873; CE36372; WBGene00007071; WP:CE36372 WormBase description: glutamyl aminopeptidase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S6 removed genes of contamination
AC3.7 AC3.7 P W All gene names: dod-15; ugt-1; AC3.7; 5K877; CE05137; NM_073270; WBGene00007072; WP:CE05137 WormBase description: UDP-glucuronosyltransferase
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction Ethanol-response, Murphy et al 2003 Fig2 Class1 elongate lifespan, ReichertK et al 2005 T1 xenobiotic induced UDP-gl, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
AC8.3 AC8.3 P W All gene names: AC8.3; AC8.F; CE37737; WBGene00007075; WP:CE37737; XA844
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
B0198.3 B0198.3 P W All gene names: B0198.3; CE37308; WBGene00007116; WP:CE37308; XM662 WormBase description: protein kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
B0205.4 B0205.4 P W All gene names: B0205.4; 1L320; CE39201; WBGene00015019; WP:CE39201 WormBase description: The B0205.4 gene encodes a homolog of the human gene FUT1, which when mutated leads to leukocyte adhesion deficiency, type II (OMIM:266265).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0205.6 B0205.6 P W All gene names: B0205.6; 1L315; CE30405; WBGene00015021; WP:CE30405 WormBase description: aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0218.6 B0218.6 P W All gene names: clec-51; B0218.6; 4I928; CE06689; WBGene00015050; WP:CE06689 WormBase description: 7TM chemoreceptor, clec family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
B0222.6 B0222.6 P W All gene names: col-144; B0222.6; 5J640; CE30585; NM_072973; WBGene00000717; WP:CE30585
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic induced Collag, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0222.7 B0222.7 P W All gene names: col-145; B0222.7; 5J642; CE06698; NM_072974; WBGene00000718; WP:CE06698
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0222.8 B0222.8 P W All gene names: col-10; B0222.8; 5J644; CE06699; NM_072975; WBGene00000599; WP:CE06699 WormBase description: col-10 encodes a collagen protein; expressed exclusively in hypodermal cells
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic induced Collag, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0280.2 B0280.2 P W All gene names: B0280.2; 3I215; CE37473; WBGene00015100; WP:CE37473
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
B0286.3 B0286.3 P W All gene names: B0286.3; 2E660; CE03863; WBGene00015116; WP:CE03863 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: saicar synthetase/air carboxlyase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Murphy et al 2003 Fig2 Class1 elongate lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S6 removed genes of contamination
B0304.3 B0304.3 P W All gene names: cyp-23A1; B0304.3; 2E805; CE27050; NM_062396; WBGene00015135; WP:CE27050 WormBase description: The B0304.3 gene encodes a homolog of the human gene CYP7B1, which when mutated leads to giant cell hepatitis (OMIM:231100). WormBase CDS description: Cytochrome P450
Member of lists (Publications lists):
Custodia et al 2001 T2 Cytochrome P450, Menzel et al 2001 T3 CYP genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
B0344.2 B0344.2 P W All gene names: wrt-9; B0344.2; CE33963; NM_075897; WBGene00006955; WP:CE33963; XC209
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0348.5 B0348.5 P W All gene names: B0348.5; Y108G3B.A; 5A485; CE17330; WBGene00015153; WP:CE17330
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0379.1 B0379.1 P W All gene names: B0379.1; 1K653; CE20452; WBGene00007155; WP:CE20452
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
B0393.5 B0393.5 P W All gene names: B0393.5; 3F865; CE00858; WBGene00007170; WP:CE00858 WormBase description: EGF-like aspartic acid and asparagine hydroxylation sites
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
B0395.2 B0395.2 P W All gene names: B0395.2; CE02943; WBGene00007174; WP:CE02943; XQ647 WormBase description: Sterol O-acyltransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Metabolism, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0414.4 B0414.4 P W All gene names: B0414.4; WBGene00043087
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0416.1 B0416.1 P W All gene names: B0416.1; CE19663; WBGene00015177; WP:CE19663; XJ927
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
B0491.2 B0491.2 P W All gene names: rol-5; sqt-1; B0491.2; B0491.2.1; B0491.2.2; 2L626; CE02104; NM_064020; Rol; WBGene00005016; WP:CE02104 WormBase description: sqt-1 encodes a cuticle collagen; during larval and adult development, sqt-1 activity is required, likely redundantly, for normal cuticle, and hence organismal, morphology; sqt-1 mRNA abundance oscillates during larval development, peaking at one point during each larval stage and peaking again in adults; sqt-1 transcripts are also detected in animals at the L1-L2d molt; in the temporally distinct waves of collagen gene expression that occur during larval development, sqt-1 mRNA appears to be synthesized during the second, or intermediate, stage, just very slightly earlier than sqt-3/col-1 and dpy-13; SQT-1 protein is detected in cuticle extracts from L2, L3, and L4 larvae, and from adults, but is not detected in extracts from L1 or dauer larvae; sqt-1 interacts genetically with a number of genes also required for normal cuticle and organismal morphology, e.g., rol-6 and lon-3, which also encode cuticular collagens. WormBase CDS description: cuticle collagen SQT-1
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic induced Collag, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0511.5 B0511.5 P W All gene names: B0511.5; 1L205; CE17344; WBGene00015231; WP:CE17344
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0513.5 B0513.5 P W All gene names: B0513.5; 4O634; CE37309; WBGene00007197; WP:CE37309
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
BE10.2 BE10.2 P W All gene names: BE10.2; 3N884; CE30592; WBGene00007210; WP:CE30592
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C01B10.10 C01B10.10 P W All gene names: C01B10.10; 4H390; CE37180; WBGene00015284; WP:CE37180
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B
C01B10.4 C01B10.4 P W All gene names: C01B10.4; 4H396; CE34641; WBGene00015279; WP:CE34641
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C01B12.1 C01B12.1 P W All gene names: sqt-2; C01B12.1; 2A315; CE07789; NM_061234; WBGene00005017; WP:CE07789 WormBase description: Uncloned locus that affects alae formation and body morphology such that mutants exhibit a slightly dumpy phenotype and the bodies of mutants are helically twisted. WormBase CDS description: cuticular collagen
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C01B12.7 C01B12.7 P W All gene names: C01B12.7; 2A316; CE07795; WBGene00015290; WP:CE07795
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C01B7.4 C01B7.4 P W All gene names: tag-117; C01B7.4; 5J272; CE06728; WBGene00006467; WP:CE06728 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: guanylate kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b signaling
C01F1.3 C01F1.3 P W All gene names: phi-41; C01F1.3; C01F1.3a.1; C01F1.3a.2; 2E587; CE06744; CE39553; WBGene00015298; WP:CE06744; WP:CE39553
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Metabolism, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C01F1.5 C01F1.5 P W All gene names: C01F1.5; 2E570; CE06746; WBGene00015300; WP:CE06746
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 Resveratrol regulate WT
C02D5.1 C02D5.1 P W All gene names: C02D5.1; 3J649; CE24778; WBGene00015335; WP:CE24778 WormBase description: Isovaleryl-CoA dehydrogenase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C02D5.2 C02D5.2 P W All gene names: C02D5.2; 3J647; CE00034; CE39554; WBGene00015336; WP:CE00034; WP:CE39554
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C02F4.2 C02F4.2 P W All gene names: cna-1; pph-3; pph2B-A; tax-6; C02F4.2; 4L258; CE07853; CE33593; PP2B; WBGene00006527; WP:CE07853; WP:CE33593 WormBase description: tax-6 encodes an ortholog of calcineurin A that is required for inhibition and adaptation of several sensory neurons and for the normal regulation of egg-laying by serotonin; TAX-6 stimulates transcription of rcn-1, and binds RCN-1 protein if free Ca[2+] is present; in general, calcineurin positively regulates calcium-dependent signaling.
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S8 SAGE genes in the dauer exit
C04C11.2 C04C11.2 P W All gene names: C04C11.2; C04C11.2.1; C04C11.2.2; CE05210; WBGene00007296; WP:CE05210; XO655
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C04E12.12 C04E12.12 P W All gene names: C04E12.12; 5D864; CE39556; WBGene00015441; WP:CE39556
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C04E6.12 C04E6.12 P W All gene names: C04E6.12; 5G400; CE07917; WBGene00015426; WP:CE07917
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C04F1.1 C04F1.1 P W All gene names: C04F1.1; 1G304; CE17364; WBGene00015442; WP:CE17364
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C05A9.1 C05A9.1 P W All gene names: pgp-5; C05A9.1; CE05221; NM_077409; WBGene00003999; WP:CE05221; XL474 WormBase description: pgp-5 encodes a transmembrane protein that is a member of the P-glycoprotein subclass of the ATP-binding cassette (ABC) transporter superfamily; by homology, PGP-5 is predicted to function as an ATP-dependent efflux pump that protects C. elegans by exporting exogenous toxins; however, as loss of pgp-5 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of PGP-5 in C. elegans development and/or behavior is not yet known. WormBase CDS description: p-glycoprotein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C05C8.3 C05C8.3 P W All gene names: dao-1; fkb-3; C05C8.3; 5H707; CE07921; NM_072434; WBGene00001428; WP:CE07921 WormBase description: fkb-3 encodes a peptidylprolyl cis/trans isomerase homologous to mammalian FK506 immunosuppressant-binding protein 9; FKB-3 expression is positively regulated by signaling through the DAF-2 insulin receptor-like pathway and the activity of the DAF-16 fork-head transcription factor suggesting that FKB-3 could play a role in metabolism and longevity; however, as loss of FKB-3 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of FKB-3 in C. elegans development and/or behavior is not yet known; FKB-3 contains a predicted endoplasmic reticulum (ER) retention sequence and is thus proposed to localize to the ER. WormBase CDS description: FKBP-binding protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C05C8.7 C05C8.7 P W All gene names: phi-49; C05C8.7; C05C8.7.1; C05C8.7.2; C05C8.7.3; C05C8.7.4; 5H724; CE07925; WBGene00015464; WP:CE07925 WormBase description: mannose-6-phosphate isomerase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Metabolism, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003 S4 genes pass two-wayANOVA P0
C05C9.1 C05C9.1 P W All gene names: C05C9.1; CE33968; WBGene00007325; WP:CE33968; XL779 WormBase description: LBP / BPI / CETP family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C05D11.6 C05D11.6 P W All gene names: nas-4; C05D11.6; 3H498; CE37080; NM_066004; WBGene00003523; WP:CE37080 WormBase description: nas-4 encodes a predicted extracellular matrix metalloprotease of the M12A (astacin) family that contains an N-terminal signal sequence and a catalytic domain, but no recognizable regulatory domains in the C-terminus; as loss of nas-4 activity via RNAi results in no obvious abnormalities, the precise role of NAS-4 in C. elegans development and/or behavior is not yet known; however, an NAS-4 translational reporter is expressed in the pharynx and intestine in larvae and adults, suggesting a role for NAS-4 in digestion; NAS-4 is specifically detected within cells of the pharyngeal procorpus, metacorpus, isthmus, and terminal bulb, with extracellular expression detected in the lumen of the terminal bulb and in the gut. WormBase CDS description: zinc metalloprotease
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C06B8.8 C06B8.8 P W All gene names: rpl-38; C06B8.8; C06B8.8.1; C06B8.8.2; 5P991; CE20485; NM_074459; WBGene00004452; WP:CE20485 WormBase description: rpl-38 encodes a large ribosomal subunit L38 protein.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Protein Synthesis
C06E2.1 C06E2.1 P W All gene names: C06E2.1; CE03944; WBGene00015527; WP:CE03944; XJ490
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C06E7.4 C06E7.4 P W All gene names: C06E7.4; 4G616; CE29026; WBGene00015541; WP:CE29026
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C06G1.1 C06G1.1 P W All gene names: C06G1.1; CE27054; WBGene00015545; WP:CE27054; XR251
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C06G1.5 C06G1.5 P W All gene names: C06G1.5; CE37187; WBGene00015548; WP:CE37187; XR254 WormBase description: protein phosphatase PP2A
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C06H5.1 C06H5.1 P W All gene names: C06H5.1; 5S376; CE27668; WBGene00007392; WP:CE27668 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C07B5.2 C07B5.2 P W All gene names: C07B5.2; CE00892; WBGene00007407; WP:CE00892; XK134
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C07E3.10 C07E3.10 P W All gene names: C07E3.10; 2K637; CE15607; WBGene00007420; WP:CE15607
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C07E3.3 C07E3.3 P W All gene names: C07E3.3; 2K644; CE32305; WBGene00007414; WP:CE32305
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C07H6.3 C07H6.3 P W All gene names: C07H6.3; C07H6.3.1; C07H6.3.2; 3I603; CE29074; WBGene00015580; WP:CE29074
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C09E8.3 C09E8.3 P W All gene names: mlt-10; C09E8.3; 2A841; CE19349; WBGene00015646; WP:CE19349
Member of lists (Publications lists):
Bishop et al 2004 T1 Upregulated in vhl-1 vs WT, Lund et al 2002 Fig1 aging-regulated genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C09H10.2 C09H10.2 P W All gene names: rpl-41; C09H10.2; C09H10.2.1; C09H10.2.2; C09H10.2.3; 2L388; CE02131; NM_063974; WBGene00004454; WP:CE02131 WormBase description: rpl-41 encodes a large ribosomal subunit L41 protein; by homology, RPL-41 is predicted to function in protein biosynthesis. WormBase CDS description: 60S ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Protein Synthesis
C09H5.2 C09H5.2 P W All gene names: C09H5.2; 5I559; CE24797; CE32578; WBGene00015660; WP:CE24797; WP:CE32578 WormBase description: ATPase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C10F3.6 C10F3.6 P W All gene names: fut-8; C10F3.6; 5G468; CE32580; NM_072154; WBGene00001508; WP:CE32580; fut8 WormBase description: fut-8 encodes a core alpha 1,6-fucosyltransferase; characterization of a recombinant form of the protein that contains the catalytic region of FUT-8 reveals a sustrate requirement for unsubstituted nonreducing terminal GlcNAc residues.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Metabolism
C11E4.6 C11E4.6 P W All gene names: C11E4.6; CE31411; WBGene00007520; WP:CE31411; XK235 WormBase description: ankyrin repeats
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C11H1.3 C11H1.3 P W All gene names: C11H1.3; CE05262; WBGene00007529; WP:CE05262; XO930 WormBase description: Zinc finger, C3HC4 type (RING finger)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C13C12.2 C13C12.2 P W All gene names: C13C12.2; 5N4; CE08133; WBGene00007552; WP:CE08133
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C14A4.9 C14A4.9 P W All gene names: C14A4.9; C14A4.9.1; C14A4.9.2; 2K891; CE02150; WBGene00007560; WP:CE02150
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C14B9.1 C14B9.1 P W All gene names: hsp-12.2; C14B9.1; C14B9.1.1; C14B9.1.2; C14B9.1.3; 3J229; CE00072; NM_066375; WBGene00002011; WP:CE00072 WormBase description: hsp-12.2 is orthologous to the human gene CRYSTALLIN, ALPHA B (CRYAB; OMIM:123590), which when mutated leads to disease. WormBase CDS description: Alpha-B-crystallin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C14F5.4 C14F5.4 P W All gene names: C14F5.4; CE30370; WBGene00015777; WP:CE30370; XI576
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C15C6.1 C15C6.1 P W All gene names: C15C6.1; 1M795; CE18501; WBGene00007600; WP:CE18501
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C15C7.1 C15C7.1 P W All gene names: C15C7.1; C15C7.1.1; C15C7.1.2; CE30865; WBGene00015789; WP:CE30865; XD783
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C15C8.2 C15C8.2 P W All gene names: cky-1; C15C8.2; 5N221; CE30427; NM_073783; WBGene00000521; WP:CE30427 WormBase description: cky-1 encodes a member of the basic-helix-loop-helix-PAS (bHLH-PAS) protein family; it is likely that CKY-1 together with AHA-1, another bHLH-PAS protein, has a role in pharyngeal function; CKY-1 is expressed in most non-neuronal pharyngeal cells. WormBase CDS description: Human ARNT-interacting protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C15F1.2 C15F1.2 P W All gene names: C15F1.2; 2H277; CE23545; WBGene00015795; WP:CE23545
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C15H9.10 C15H9.10 P W All gene names: C15H9.10; CE06836; WBGene00015804; WP:CE06836; XG730
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C16B8.4 C16B8.4 P W All gene names: C16B8.4; CE30248; WBGene00015824; WP:CE30248; XE590
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C16C4.13 C16C4.13 P W All gene names: math-8; C16C4.13; 2C152; CE08209; WBGene00015837; WP:CE08209
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C16C8.2 C16C8.2 P W All gene names: C16C8.2; 2D722; CE23553; WBGene00015841; WP:CE23553 WormBase description: peroxidase precursor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C16D9.2 C16D9.2 P W All gene names: let-333; rol-3; C16D9.2; 5I710; CE32798; CE32799; CE32800; NM_072721; NM_182326; NM_182327; WBGene00004395; WP:CE32798; WP:CE32799; WP:CE32800 WormBase description: rol-3 was identified in screens for recessive mutations that affect body morphology; strong loss-of-function mutations in rol-3 result in early-to-mid larval lethality, while weaker mutations result in animals that are left-handed rollers at the adult stage only; lethal rol-3 mutations are suppressed by mutations in srl-1 and srl-2.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 Resveratrol regulate WT
C17B7.11 C17B7.11 P W All gene names: fbxa-65; C17B7.11; 5D824; CE16859; WBGene00015885; WP:CE16859 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C17G1.6 C17G1.6 P W All gene names: nas-37; C17G1.6; C17G1.6b.1; C17G1.6b.2; CE31417; CE38034; WBGene00003553; WP:CE31417; WP:CE38034; XK564 WormBase description: nas-37 encodes an extracellular matrix metalloprotease of the M12A (astacin) family that, in addition to its catalytic domain, contains an N-terminal secretion signal and EGF-like, CUB, and thrombospondin-1 domains in the C-terminal regulatory, or predicted protein-protein interaction, region; NAS-37 activity is required for efficient or full completion of the four larval molts in which older cuticle is shed and replaced by the newer, stage-specific cuticle; NAS-37 is able to induce the formation of an anterior contractile ring in cuticle from a parasitic nematode, suggesting that anterior cuticle digestion may be a conserved process in nematode ecdysis; in addition, NAS-37 may also play a minor role in normal cuticular collagen synthesis and/or processing; a NAS-37 translational reporter is expressed in the anterior hypodermis Hyp5, the excretory duct cell, and in pharyngeal, rectal, amphid, and vulval tissues; expression in Hyp5 can be see up to four hours prior to ecdysis; nas-37 promoter fusions additionally reveal expression in all hypodermal cells, although the functional significance of this more widespread expression is not yet known.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Proteases, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 Resveratrol regulate WT
C18B2.3 C18B2.3 P W All gene names: C18B2.3; CE27077; WBGene00015954; WP:CE27077; XE221
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C18C4.5 C18C4.5 P W All gene names: C18C4.5; 5G32; CE30729; CE35246; WBGene00015966; WP:CE30729; WP:CE35246
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C18D11.1 C18D11.1 P W All gene names: C18D11.1; 3M907; CE18512; WBGene00007679; WP:CE18512
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C18E9.9 C18E9.9 P W All gene names: C18E9.9; 2J278; CE05301; WBGene00007689; WP:CE05301
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C23F12.1 C23F12.1 P W All gene names: C23F12.1; CE32133; CE32134; WBGene00016006; WP:CE32133; WP:CE32134; XK45
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C24A3.6 C24A3.6 P W All gene names: mah-2; twk-18; unc-110; C24A3.5; C24A3.6; C24A3.6.1; C24A3.6.2; CE24811; WBGene00006672; WP:CE24811; XJ611 WormBase description: twk-18 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; TWK-18 was originally defined by gain-of-function mutations that result in embryonic lethality at the two-fold stage, locomotion defects, longer than normal body length, abnormal egg-laying, and temperature-sensitive paralysis; as loss of TWK-18 function via reversion or RNA-mediated interference does not result in any abnormalities, TWK-18 likely functions redundantly with other TWK channels; TWK-18 can function as an outwardly rectifying K+ channel, and is activated by temperature increases, thus making it a temperature-gated channel; TWK-18 is expressed in body wall muscle. WormBase CDS description: potassium channel protein
Member of lists (Publications lists):
Jiang et al 2001 Fig1 male-enriched neuronal, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C24B5.3 C24B5.3 P W All gene names: ptr-1; C24B5.3; 5J656; CE06861; NM_072979; WBGene00004216; WP:CE06861
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C25F9.4 C25F9.4 P W All gene names: C25F9.4; 5T886; CE33975; WBGene00007724; WP:CE33975
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C26B9.3 C26B9.3 P W All gene names: C26B9.3; CE29187; WBGene00016133; WP:CE29187; XF957
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C26D10.5 C26D10.5 P W All gene names: eff-1; elf-1; C26D10.5; 2I639; CE03028; CE30881; CE31159; CE32594; WBGene00001159; WP:CE03028; WP:CE30881; WP:CE31159; WP:CE32594 WormBase description: The eff-1 gene encodes a novel, type I transmembrane glycoprotein that is required for cell fusion during development; eff-1(hy21) mutants are viable, but have severe body morphology defects associated with cell fusion failure.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C26E1.3 C26E1.3 P W All gene names: C26E1.3; 5N787; CE31885; WBGene00007749; WP:CE31885
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown
C26F1.1 C26F1.1 P W All gene names: C26F1.1; 5I267; CE32807; CE35249; WBGene00016146; WP:CE32807; WP:CE35249
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C27A2.4 C27A2.4 P W All gene names: C27A2.4; 2F348; CE39326; WBGene00016152; WP:CE39326 WormBase description: acid phosphotase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b others, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C27H5.1 C27H5.1 P W All gene names: pdl-1; C27H5.1; 2H473; CE01175; NM_063089; WBGene00003966; WP:CE01175
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C27H6.1 C27H6.1 P W All gene names: apt-10; C27H6.1; 5K448; CE08425; NM_073165; WBGene00000167; WP:CE08425 WormBase description: apt-10 encodes the C. elegans ortholog of the mammalian Stonins and Drosophila Stoned B, membrane-associated proteins that contain three distinct domains: a proline-rich domain, a stonin homology domain, and a domain paralogous to the mu-adaptin subunits of adaptor protein complexes 1-3; by homology, APT-10 is predicted to regulate the activity of the heteromeric AP-1 and AP-2 clathrin adaptor protein complexes, and thus to play a role in intracellular protein trafficking and endocytosis; in vivo, apt-10 is required for the secretion of EGL-17/FGF, required for sex myoblast migration, from the vulval precursor cell P6.p; loss of apt-10 activity via large-scale RNAi screens, however, does not result in any obvious abnormalities. WormBase CDS description: Adaptor complexes medium subunit family
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C28G1.1 C28G1.1 P W All gene names: ubc-23; C28G1.1; CE37613; NM_077097; WBGene00006718; WP:CE37613; XJ467 WormBase description: ubc-23 encodes a predicted conjugating enzyme (UBCs/E2s) of the ubiquitin-conjugation system; expressed in larvae and adults in cells around the pharynx and in intestinal cells. WormBase CDS description: ubiquitin-conjugating enzyme
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C28G1.3 C28G1.3 P W All gene names: C28G1.3; C28G1.3.1; C28G1.3.2; CE37614; WBGene00016188; WP:CE37614; XJ452 WormBase description: GTP-binding protein and M protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C28H8.5 C28H8.5 P W All gene names: C28H8.5; 3G973; CE01827; CE39681; WBGene00016196; WP:CE01827; WP:CE39681
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C29E4.1 C29E4.1 P W All gene names: col-90; C29E4.1; 3J39; CE00083; NM_066328; WBGene00000665; WP:CE00083 WormBase description: Cuticle collagen
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
C29E6.1 C29E6.1 P W All gene names: let-653; C29E6.1; C29E6.1b.1; C29E6.1b.2; 4M655; CE05332; CE37323; WBGene00002827; WP:CE05332; WP:CE37323 WormBase description: let-653 encodes a mucin-like protein similar to the highly glycosylated mucins secreted by the apical surface of epithelia and believed to provide a protective barrier to exposed cellular surfaces; LET-653 is required for viability, locomotion, and for maintaining the tubular epithelial structure of the excretory cell canals. WormBase CDS description: LET-653 mucin like protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 Resveratrol regulate WT
C29E6.2 C29E6.2 P W All gene names: trpa-1; C29E6.2; 4M639; CE37324; WBGene00007801; WP:CE37324 WormBase description: ankyrin repeats
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C29F3.2 C29F3.2 P W All gene names: wrt-8; C29F3.2; 5P822; CE29200; NM_074404; WBGene00006954; WP:CE29200 WormBase description: Hint module
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C29F3.5 C29F3.5 P W All gene names: C29F3.5; 5P828; CE08439; WBGene00007806; WP:CE08439 WormBase description: Lectin C-type domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C30B5.6 C30B5.6 P W All gene names: C30B5.6; 2G508; CE32155; WBGene00016247; WP:CE32155
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S8 SAGE genes in the dauer exit
C30F12.5 C30F12.5 P W All gene names: C30F12.5; 1H568; CE16885; WBGene00016264; WP:CE16885
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S8 SAGE genes in the dauer exit, Wang et al 2003 S4 genes pass two-wayANOVA P0
C30F12.6 C30F12.6 P W All gene names: C30F12.6; 1H569; CE16886; WBGene00016265; WP:CE16886 WormBase description: seven trans-membrane receptor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C30F2.3 C30F2.3 P W All gene names: C30F2.3; CE35416; WBGene00007817; WP:CE35416; XQ699
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Early genes, Wang et al 2003 S4 genes pass two-wayANOVA P0
C31A11.1 C31A11.1 P W All gene names: C31A11.1; 5Q771; CE15653; WBGene00007829; WP:CE15653
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C31H2.2 C31H2.2 P W All gene names: dpy-8; C31H2.2; CE04130; NM_076472; WBGene00001070; WP:CE04130; XF768 WormBase description: dpy-8 encodes a collagen with a nematode-specific N-terminal domain that is required for normal body morphology and (perhaps) for a normal embryonic cell division rate; dpy-8 interacts genetically with emb-5 and glp-1. WormBase CDS description: collagen alpha (weak)
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
C32E12.3 C32E12.3 P W All gene names: osr-1; C32E12.3; 1F768; CE30495; NM_059144; WBGene00016329; WP:CE30495
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C33A12.6 C33A12.6 P W All gene names: ugt-21; C33A12.6; 4K263; CE05352; WBGene00007885; WP:CE05352 WormBase description: UDP-glucuronysltransferase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, GO categories, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C33D3.3 C33D3.3 P W All gene names: C33D3.3; CE02154; WBGene00007894; WP:CE02154; XL103
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C33D9.3 C33D9.3 P W All gene names: C33D9.3; 4J556; CE33758; CE33759; WBGene00007898; WP:CE33758; WP:CE33759
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S8 SAGE genes in the dauer exit, Wang et al 2003 S4 genes pass two-wayANOVA P0
C33F10.7 C33F10.7 P W All gene names: C33F10.7; C33F10.7b.1; C33F10.7b.2; 2F108; CE04140; CE37751; WBGene00016355; WP:CE04140; WP:CE37751 WormBase description: esterase and beta-lactamase
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction Ethanol-response, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C34C12.6 C34C12.6 P W All gene names: C34C12.6; 3E573; CE01514; WBGene00007925; WP:CE01514
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C34C12.7 C34C12.7 P W All gene names: C34C12.7; 3E574; CE01515; WBGene00007926; WP:CE01515
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C34C6.6 C34C6.6 P W All gene names: PEX-5; prx-5; C34C6.6; 2I995; CE03054; CE36377; WBGene00004194; WP:CE03054; WP:CE36377 WormBase description: prx-5 encodes an ortholog of the human receptor for type I peroxisomal targeting signal protein, PXR1 (or PEX5; OMIM:600414), which when mutated leads to neonatal adrenoleukodystrophy or Zellweger syndrome; PXR1 protein is a component of the peroxisomal import machinery known to exist in organisms like yeast, plants and mammals.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C34E11.3 C34E11.3 P W All gene names: tag-241; C34E11.3; CE08573; WBGene00007936; WBGene00044079; WP:CE08573; XM453
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C34E7.4 C34E7.4 P W All gene names: C34E7.4; CE03061; WBGene00007934; WP:CE03061; XN552
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C34F6.10 C34F6.10 P W All gene names: C34F6.10; CE15679; WBGene00007944; WP:CE15679; XL848 WormBase description: Fibronectin type III domain (4 domains)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C34F6.8 C34F6.8 P W All gene names: C34F6.8; C34F6.8.1; C34F6.8.2; C34F6.8.3; CE15677; WBGene00007942; WP:CE15677; XL835 WormBase description: Isocitrate and isopropylmalate dehydrogenases
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C34H4.4 C34H4.4 P W All gene names: col-107; C34H4.4; 4C313; CE20539; CE27821; NM_067693; NM_182305; WBGene00000681; WP:CE20539; WP:CE27821 WormBase description: cuticular collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C37A5.9 C37A5.9 P W All gene names: pry-1; C37A5.9; 1O766; CE30125; NM_061073; WBGene00004202; WP:CE30125
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C37F5.1 C37F5.1 P W All gene names: lin-1; C37F5.1; C37F5.1.1; C37F5.1.2; 4D42; CE31440; WBGene00002990; WP:CE31440 WormBase description: lin-1 encodes an Ets-domain-containing transcription factor that is a member of the ETS gene family that includes human ELK1, 3, and 4 (OMIM:600247); LIN-1 functions as a general effector of MAP kinase-mediated signaling; when MAP kinase is inactive, LIN-1 forms a complex with LIN-31/WH that inhibits vulval cell fate specification; upon MAP kinase activation (vulval induction), LIN-1 is phosphorylated, dissociates from LIN-31, and becomes inactive, thus allowing for vulval development.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C38C6.2 C38C6.2 P W All gene names: atg-2; C38C6.2; 2O926; CE31162; NM_064642; WBGene00000225; WP:CE31162 WormBase description: atg-2 encodes an amino acid transporter glycoprotein subunit; when co-expressed in Xenopus oocytes with either the AAT-1 or AAT-3 catalytic subunit, ATG-2 facilitates amino acid uptake and exchange, showing a relatively high affinity for small and some large neutral amino acids; when co-expressed with AAT-9, ATG-2 is able to enhance the activity of this catalytic subunit; ATG-2 can covalently associate with AAT-1 or AAT-3 in the Xenopus expression system; when co-expressed with AAT-1 or AAT-3, ATG-2 localizes to the cell surface of oocytes, but when expressed alone, ATG-2 localizes intracellularly. WormBase CDS description: Alpha amylase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C38C6.3 C38C6.3 P W All gene names: C38C6.3; 2O919; CE15695; WBGene00007996; WP:CE15695
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C38C6.6 C38C6.6 P W All gene names: tag-297; C38C6.6; C38C6.6.1; C38C6.6.2; 2O915; CE15698; WBGene00007999; WP:CE15698
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C39E9.7 C39E9.7 P W All gene names: C39E9.7; 4N838; CE35427; WBGene00008031; WP:CE35427 WormBase description: sodium/phosphate transporter
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C40C9.5 C40C9.5 P W All gene names: nlg-1; tag-27; C40C9.5; CE18546; CE32604; NM_077882; NM_182454; WBGene00006412; WP:CE18546; WP:CE32604; XO244 WormBase description: Carboxylesterases (2 domains)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C40D2.2 C40D2.2 P W All gene names: math-20; C40D2.2; C40D2.2.1; C40D2.2.2; 2C287; CE19374; WBGene00016555; WP:CE19374 WormBase description: The C40D2.2 gene encodes a protein closely similar to C46F9.3, which has a meprin-associated Traf homology (MATH) domain and may be involved in apoptosis. WormBase CDS description: possible trans-splice site at 5004
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B
C40D2.3 C40D2.3 P W All gene names: math-21; C40D2.3; 2C279; CE19375; WBGene00016556; WP:CE19375
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C40H5.3 C40H5.3 P W All gene names: C40H5.3; CE33982; WBGene00008046; WP:CE33982; XM373
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C41C4.5 C41C4.5 P W All gene names: unc-105; C41C4.5; C41C4.5.1; C41C4.5.2; 2I411; CE23585; NM_063301; WBGene00006832; WP:CE23585 WormBase description: unc-105 encodes a muscle degenerin, a mechanosensory membrane channel that is a member of the degenerin ion channel superfamily and similar to subunits of the mammalian amiloride-sensitive epithelial sodium channel (ENaC, OMIM:600761); UNC-105 is required for normal growth and for normal contraction and organization of muscle, where it is expressed; UNC-105 interacts with LET-2, an alpha2 chain of type IV collagen that is also expressed by muscle and localized to the basement membrane between muscle and hypodermis. WormBase CDS description: Amiloride-sensitive sodium channel
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Transporters, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
C42D4.3 C42D4.3 P W All gene names: C42D4.3; 4H945; CE04191; WBGene00016596; WP:CE04191
Member of lists (Publications lists):
Bishop et al 2004 T4 57 vhl-1 depend hif-1 indep, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C42D8.1 C42D8.1 P W All gene names: C42D8.1; CE39693; WBGene00016599; WP:CE39693; XF729
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
C42D8.5 C42D8.5 P W All gene names: acn-1; C42D8.5; C42D8.5b.1; C42D8.5b.2; C42D8.5b.3; CE30627; CE37212; WBGene00000039; WP:CE30627; WP:CE37212; XF712 WormBase description: acn-1 encodes an ACE-like protein required for larval development and adult morphogenesis, and probably for cell fusion in larval seam cells; ACN-1 lacks not only the HExxH consensus metallopeptidase motif, but also other active site residues found in the sequence HEAI/VxD of mammalian and insect ACEs; acn-1 is expressed in hypodermal cells, vulval precursor cells, and ray papillae in the male tail; the hypodermal expression of acn-1 appears to be controlled by nhr-23 and nhr-25.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C43C3.1 C43C3.1 P W All gene names: ifp-1; C43C3.1; CE01523; IF E1; NM_077227; WBGene00002067; WP:CE01523; XK296 WormBase description: ifp-1 encodes a nonessential intermediate filament protein; IFP-1 is predicted to function as a structural component of the cytoskeleton; IFP-1 has no obvious function in RNAi assays. WormBase CDS description: intermediate filament protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C43G2.2 C43G2.2 P W All gene names: C43G2.2; 4H330; CE08691; WBGene00016611; WP:CE08691 WormBase description: cytoskeleton-like protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C44B11.3 C44B11.3 P W All gene names: Alpha-tubulin; mec-12; tba-3; C44B11.3; C44B11.3.1; C44B11.3.2; 3E222; CE24843; NM_065262; WBGene00003175; WP:CE24843 WormBase description: mec-12 encodes a novel C. elegans alpha-tubulin that is unique amongst C. elegans alpha tubulins in that it may be subject to post-translational acetylation; MEC-12 is required for normal mechanosensory response to gentle touch, and specifically for formation of the 15-protofilament microtubule bundle present in the touch receptor neurons; mec-12 interacts genetically with mec-5, which encodes a unique C. elegans collagen secreted by the hypodermis; MEC-12 is highly expressed in the touch neurons as well as in several other neurons that do not contains the microfilament bundle, such as the ventral cord motorneurons. WormBase CDS description: alpha tubulin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003 S4 genes pass two-wayANOVA P0
C44B7.3 C44B7.3 P W All gene names: C44B7.3; 2H152; CE32328; WBGene00016625; WP:CE32328
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C44B7.9 C44B7.9 P W All gene names: pmp-2; C44B7.9; 2H174; CE02547; NM_063007; WBGene00004059; WP:CE02547 WormBase description: peroxisomal membrane protein (PMP70, an ATP-binding transport protein)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C44C1.2 C44C1.2 P W All gene names: C44C1.2; CE30126; WBGene00016642; WP:CE30126; XB577
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C44H4.1 C44H4.1 P W All gene names: C44H4.1; CE35433; WBGene00008093; WP:CE35433; XP193 WormBase description: Leucine Rich Repeat (2 copies) (6 domains)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C44H4.2 C44H4.2 P W All gene names: sym-5; C44H4.2; CE08723; NM_078024; WBGene00006370; WP:CE08723; XP197 WormBase description: sym-5 encodes a predicted transmembrane protein that contains 13 contiguous leucine-rich repeats (LRRs) and that is similar to SYM-1, a secreted protein involved in muscle attachment; sym-5 activity appears to be required for embryogenesis and functionally overlaps with that of sym-1 and mec-8 in affecting muscle attachment; in addition, loss of sym-5 activity via RNA-mediated interference (RNAi) in a hypersensitized strain indicates that SYM-5 may also be required for locomotion, body morphology, and normal rates of postembryonic growth. WormBase CDS description: Drosophila chaoptin protein like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C44H4.3 C44H4.3 P W All gene names: sym-1; C44H4.3; CE08724; NM_078025; WBGene00006366; WP:CE08724; XP201 WormBase description: sym-1 encodes a protein containing 15 contiguous leucine-rich repeats (LRRs) that functionally overlaps with sym-5 and interacts with mec-8 with respect to embryonic viability and attachment of body muscle to the extracellular cuticle; expression begins at the time of embryonic elongation and SYM-1 is secreted from the apical hypodermal surface of the embryo WormBase CDS description: Drosophila chaoptin protein like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C45B2.7 C45B2.7 P W All gene names: ptr-4; C45B2.7; CE30905; NM_076612; WBGene00004219; WP:CE30905; XG680
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C45G7.6 C45G7.6 P W All gene names: C45G7.6; WBGene00016672
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C45H4.12 C45H4.12 P W All gene names: str-52; C45H4.12; 5C622; CE17553; NM_071178; WBGene00006117; WP:CE17553 WormBase description: 7TM chemoreceptor, str family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C46G7.1 C46G7.1 P W All gene names: C46G7.1; C46G7.1.1; C46G7.1.2; 4G783; CE37213; WBGene00016721; WP:CE37213
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C46H11.3 C46H11.3 P W All gene names: C46H11.3; 1F609; AR16; CE08785; WBGene00016729; WP:CE08785
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C46H11.9 C46H11.9 P W All gene names: phat-2; C46H11.9; 1F614; CE08791; WBGene00016733; WP:CE08791
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
C47E12.6 C47E12.6 P W All gene names: C47E12.6; 4K753; CE32042; CE32043; WBGene00008150; WP:CE32042; WP:CE32043
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C48A7.1 C48A7.1 P W All gene names: eat-12; egl-19; pat-5; C48A7.1; 4I183; CE28820; CE31165; NM_171379; WBGene00001187; WP:CE28820; WP:CE31165 WormBase description: egl-19 encodes an ortholog of the alpha subunit of mammalian L-type calcium ion channels that affects muscle contraction in late embryonic morphogenesis, movement, egg-laying, mating and feeding; egl-19 is expressed in muscle cells and some neurons.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C48D5.1 C48D5.1 P W All gene names: ceb-1; cnr-8; nhr-6; C48D5.1; C48D5.1.1; C48D5.1.2; 3E667; CE24859; NM_065330; WBGene00003605; WP:CE24859; cnr8 WormBase description: nhr-6 encodes a nuclear receptor of the NR4A4 subfamily that is orthologous to the mammalian NGFI-B receptors and the Drosophila HR38 nuclear receptor (DHR38) that has been implicated in molting and metamorphosis; by homology, NHR-6 likely functions as a transcription factor that, based upon RNAi experiments, is required for normal ovulation and/or spermathecal development or function; an nhr-6 reporter fusion is expressed primarily in the anterior and posterior spermatheca during L3 and L4 larval stages, with some weak and variable expression also observed in two chemosensory neurons; nhr-6 mRNA is expressed in an oscillating manner throughout larval development, in a pattern that is slightly irregular with respect to the timing of larval molts and that exhibits consistently lower expression at the times when these molts actually occur. WormBase CDS description: Zinc finger, C4 type (two domains) ; Ligand-binding domain of nuclear hormone receptors
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C49A9.3 C49A9.3 P W All gene names: C49A9.3; 4G989; CE31451; WBGene00016757; WP:CE31451
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C49A9.9 C49A9.9 P W All gene names: C49A9.9; 4G983; CE27112; CE33570; WBGene00016763; WP:CE27112; WP:CE33570
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C49C8.5 C49C8.5 P W All gene names: C49C8.5; C49C8.5.1; C49C8.5.2; 4J414; CE31453; WBGene00016769; WP:CE31453
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C49F8.3 C49F8.3 P W All gene names: C49F8.3; CE05458; WBGene00008215; WP:CE05458; XO4
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C50B6.7 C50B6.7 P W All gene names: C50B6.7; 5N804; CE08876; WBGene00008220; WP:CE08876 WormBase description: amylase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, GO categories, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C50H2.1 C50H2.1 P W All gene names: fshr-1; C50H2.1; 5K373; CE28214; WBGene00008239; WP:CE28214; lgr WormBase description: C50H2.1 is orthologous to the human gene FORKHEAD BOX O1A (RHABDOMYOSARCOMA) (FSHR; OMIM:136533), which when mutated leads to disease. WormBase CDS description: steroid hormone receptor
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
C52A11.4 C52A11.4 P W All gene names: mpz-1; C52A11.4; 2L48; CE35841; CE35842; WBGene00003404; WP:CE35841; WP:CE35842 WormBase description: lethal(1) discs large-1 tumor suppressor protein-like repeats
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C52D10.12 C52D10.12 P W All gene names: C52D10.12; C52D10.12.1; C52D10.12.2; 4S142; CE28434; WBGene00016879; WP:CE28434 WormBase description: C52D10.12 encodes a homolog of human ACDP1-ACDP4 and a paralog of C01H6.6, C33D12.2, M02F4.3, R04E5.2, and R13G10.4; both C52D10.12 and ACDP1-ACDP4 belong to a family of proteins (defined by NCBI as KOG2118) that are predicted to be membrane-spanning and that share a motif (the 'ACD domain') with proteins from bacteria, yeast, plants, and metazoa; murine Acdp1 is a plasma membrane protein bacterial proteins containing the ACD domain include CorC from Salmonella typhimurium, which is involved in magnesium and cobalt efflux; C52D10.12 has no obvious function in RNAi assays.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C52D10.2 C52D10.2 P W All gene names: C52D10.2; CE17587; WBGene00016876; WP:CE17587
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1 elongate lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
C52D10.3 C52D10.3 P W All gene names: C52D10.3; CE36281; WBGene00016877; WP:CE36281
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
C53B7.1 C53B7.1 P W All gene names: rig-3; C53B7.1; CE06971; NM_076754; WBGene00004370; WP:CE06971; XH479
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C53B7.4 C53B7.4 P W All gene names: asg-2; C53B7.4; C53B7.4.1; C53B7.4.2; CE06974; NM_076751; WBGene00000210; WP:CE06974; XH461 WormBase description: asg-2 encodes a homolog of ATP synthase G required both for growth at a normally high rate and for normal osmoregulation. WormBase CDS description: ATP synthase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C53C9.2 C53C9.2 P W All gene names: C53C9.2; CE27882; WBGene00016898; WP:CE27882; XI306
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C54D1.2 C54D1.2 P W All gene names: clec-86; C54D1.2; CE06978; WBGene00016912; WP:CE06978; XH759 WormBase description: C-type lectin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C54D1.6 C54D1.6 P W All gene names: bar-1; pvl-1; spy-1; C54D1.6; C54D1.6.1; C54D1.6.2; CE08973; NM_076805; WBGene00000238; WP:CE08973; XH786 WormBase description: bar-1 encodes a beta-catenin; during C. elegans development, BAR-1 likely functions as a transcriptional coactivator whose activity is required for Q neuroblast migration, P12 cell fate specification, and P3.p through P8.p vulval cell fate specification at two different stages of development; in specifying vulval cell fates, bar-1 interacts with Wnt and MAPK signaling pathways to regulate proper expression of the LIN-39 homeodomain transcription factor, overexpresion of which can partially rescue the bar-1 mutant phenotype; in yeast two-hybrid assays, BAR-1 interacts strongly with the POP-1/TCF transcription factor, and when fused to the Gal4 DNA binding domain, BAR-1 can function in yeast as a transcriptional coactivator; during larval development, BAR-1 expression begins in P3.p through P8.p at the late L1 stage and then disappears from these cells by the mid-L3 stage; BAR-1 is also expressed in P12, in the seam cells, and in cells of the somatic gonad; BAR-1 subcellular localization, assessed using an integrated transgene, reveals localization to the cytoplasm, nucleus, and cell junctions; genetic mosaic analyses indicate that, in P4.p and in P12, bar-1 acts cell autonomously to specify cell fates. WormBase CDS description: beta-catenin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C54D10.1 C54D10.1 P W All gene names: cdr-2; C54D10.1; 5M894; CE05497; NM_073713; WBGene00008296; WP:CE05497 WormBase description: glutathione S-transferase
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction Ethanol-response, Murphy et al 2003 Fig2 Class1 elongate lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C55B7.2 C55B7.2 P W All gene names: gly-2; C55B7.2; C55B7.2.1; C55B7.2.2; 1H87; CE27887; NM_059473; WBGene00001627; WP:CE27887 WormBase description: gly-2 encodes a functional homolog of mammalian UDP-N-acetylglucosamine alpha-6-d-mannoside beta-1,6-N-acetylglucosaminyltransferase V (GlcNAc-TV) which regulates polylactosamine-containing N-glycans; gly-2 is functionally interchangeable with the mammalian gene; GLY-2 is expressed in late embryos and in a subset of neurons in larvae, spermathecal and pharyngeal-intestinal valves and in specific vulval cells of adults. WormBase CDS description: alpha-1,3(6)-mannosylglycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
C56C10.4 C56C10.4 P W All gene names: C56C10.4; 2G873; CE02569; WBGene00016962; WP:CE02569
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
D1005.2 D1005.2 P W All gene names: D1005.2; CE29741; WBGene00016996; WP:CE29741; XC81
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
D1037.3 D1037.3 P W All gene names: ftn-2; D1037.3; D1037.3.1; D1037.3.2; 1E248; CE20622; NM_058797; WBGene00001501; WP:CE20622 WormBase description: ftn-2 encodes one of two C. elegans ferritin heavy chain homologs; loss of ftn-2 activity via deletion mutation results in slightly lower brood sizes and, under iron stress conditions, slightly faster growth from the L4 to adult stage of development, and slightly reduced lifespan; an ftn-2::gfp reporter fusion is expressed in diverse tissues, including the pharynx, intestine, and hypodermis, and its expression, along with that of ftn-2 mRNA, does not appear to change significantly under iron stress conditions. WormBase CDS description: ferritin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
D2024.4 D2024.4 P W All gene names: D2024.4; 4H997; CE04293; WBGene00017052; WP:CE04293
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
D2092.8 D2092.8 P W All gene names: D2092.8; 1H197; CE09107; WBGene00017068; WP:CE09107
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
E01A2.8 E01A2.8 P W All gene names: E01A2.8; 1E714; CE24875; WBGene00017090; WP:CE24875 WormBase description: The E01A2.8 gene encodes one of five paraoxonase-like proteins; it is homologous to the human PARAOXONASE 1 gene (PON1, OMIM:168820), which in some allelic forms is associated with susceptibility to coronary artery disease.
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1 elongate lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S6 removed genes of contamination
E02H9.2 E02H9.2 P W All gene names: E02H9.2; 3D555; CE26882; WBGene00017100; WP:CE26882
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
E04A4.7 E04A4.7 P W All gene names: E04A4.7; E04A4.7.1; E04A4.7.2; E04A4.7.3; E04A4.7.4; CE16968; NM_068228; WBGene00017121; WP:CE16968 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: cytochrome C
Member of lists (Publications lists):
Golden et al 2004, N2 vs daf-2 different genes at , McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
E04F6.6 E04F6.6 P W All gene names: E04F6.6; 2H488; CE27909; WBGene00017126; WP:CE27909
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F01D5.6 F01D5.6 P W All gene names: F01D5.6; 2O297; CE18563; WBGene00008496; WP:CE18563
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F01E11.1 F01E11.1 P W All gene names: ugt-57; F01E11.1; CE04327; WBGene00017154; WP:CE04327; XH611 WormBase description: 7TM chemoreceptor, ugt family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F01G10.10 F01G10.10 P W All gene names: F01G10.10; 4L13; CE36123; WBGene00008512; WP:CE36123 WormBase description: lipopolysaccharide-binding protein like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F01G10.2 F01G10.2 P W All gene names: ech-8; F01G10.2; 4L2; CE35450; NM_069475; WBGene00001157; WP:CE35450 WormBase description: enoyl-CoA hydratase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F01G10.6 F01G10.6 P W All gene names: F01G10.6; 4K990; CE09168; WBGene00008509; WP:CE09168
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F02A9.2 F02A9.2 P W All gene names: far-1; F02A9.2; F02A9.2.1; F02A9.2.2; F02A9.2.3; 3K170; CE00133; NM_066609; WBGene00001385; WP:CE00133 WormBase description: far-1 encodes a fatty acid/retinol binding protein; expressed throughout development with highest expression levels in L3 stage larvae and in adult males. WormBase CDS description: O. volvulus 20Kd antigenic peptide
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F02D8.2 F02D8.2 P W All gene names: grd-12; F02D8.2; 5P457; CE09180; NM_074281; WBGene00001701; WP:CE09180
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F07A11.5 F07A11.5 P W All gene names: F07A11.5; 2L903; CE03147; WBGene00008548; WP:CE03147 WormBase description: ribokinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F07C3.7 F07C3.7 P W All gene names: aat-2; F07C3.7; 5J726; CE32853; NM_072993; WBGene00000003; WP:CE32853 WormBase description: aat-2 encodes a predicted amino acid transporter catalytic subunit; when co-expressed in Xenopus oocytes with a glycoprotein subunit, however, AAT-2 is not able to induce amino acid uptake. WormBase CDS description: amino acid permease
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F07C4.7 F07C4.7 P W All gene names: grsp-4; F07C4.7; 5I105; CE09206; WBGene00017201; WP:CE09206
Member of lists (Publications lists):
Bishop et al 2004 T1 Upregulated in vhl-1 vs WT, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F07D10.1 F07D10.1 P W All gene names: rpl-11.2; F07D10.1; F07D10.1.1; F07D10.1.2; F07D10.1.3; CE07033; NM_076012; WBGene00004423; WP:CE07033; XC860 WormBase description: rpl-11.2 encodes a large ribosomal subunit L11 protein; by homology, RPL-11.2 is predicted to function in protein biosynthesis. WormBase CDS description: ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F08B12.1 F08B12.1 P W All gene names: F08B12.1; CE03162; WBGene00008571; WP:CE03162; XM11 WormBase description: F08B12.1 is orthologous to the human gene AC133-2 ANTIGEN (PROML1; OMIM:604365), which when mutated leads to disease.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F08B12.2 F08B12.2 P W All gene names: prx-12; F08B12.2; CE03163; NM_077507; WBGene00004197; WP:CE03163; XM13 WormBase description: Zinc finger, C3HC4 type (RING finger)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F08C6.1 F08C6.1 P W All gene names: adt-2; F08C6.1; F08C6.1a.1; F08C6.1a.2; CE33772; CE33991; CE33992; WBGene00000083; WP:CE33772; WP:CE33991; WP:CE33992; XI213 WormBase description: Thrombospondin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F08C6.3 F08C6.3 P W All gene names: tag-197; F08C6.3; F08C6.3.1; F08C6.3.2; CE30938; WBGene00007059; WBGene00017242; WP:CE30938; XI185
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed oogenesis soma, Reinke et al 2004, list of genes in cluster B
F08D12.12 F08D12.12 P W All gene names: F08D12.12; F08D12.12.1; F08D12.12.2; 2D72; CE37221; WBGene00017255; WP:CE37221
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F08F1.6 F08F1.6 P W All gene names: spp-13; F08F1.6; CE09253; NM_077027; WBGene00004998; WP:CE09253; XJ36 WormBase description: 7TM chemoreceptor, spp family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F08F1.7 F08F1.7 P W All gene names: tag-123; F08F1.7; CE09254; WBGene00006472; WP:CE09254; XJ38
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F09B9.1 F09B9.1 P W All gene names: F09B9.1; CE15758; WBGene00008602; WP:CE15758; XK758
Member of lists (Publications lists):
GuhaThakurta et al 2002 T1 upregu on heat stress, Jiang et al 2001 Fig1 male-enriched neuronal, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F09B9.3 F09B9.3 P W All gene names: erd-2; F09B9.3; CE23635; ERD2; NM_077302; WBGene00001331; WP:CE23635; XK776 WormBase description: erd-2 encodes a protein with homology to human ER lumen protein retaining receptor 1. WormBase CDS description: ER lumen protein retaining receptor
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F09C11.1 F09C11.1 P W All gene names: F09C11.1; 4B294; CE16970; WBGene00017276; WP:CE16970
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F09C3.1 F09C3.1 P W All gene names: pes-7; tag-2; F09C3.1; 1O861; CE23636; NM_061091; WBGene00003980; WP:CE23636 WormBase description: pes-7 encodes an ortholog of the vertebrate IQGAP proteins, actin- and CLIP-170-binding proteins that serve as effectors for the Rho family GTPases Rac1 and Cdc42; IQGAP's alpha-actinin domain is related distantly to alpha-actinin domains in calponin, transgelin (SM22 alpha), and the proto-oncogene Vav; pes-7 was identified in promoter-trapping screens and by homology, is predicted to function as a key regulator of cytoskeletal organization in migrating cells and as a regulator of cadherin-mediated cell-cell adhesion; however, PES-7 has no obvious function in mass RNAi assays; a pes-7 reporter is first expressed in the ventral nerve cord of the elongating embryo and in later stages of development is also expressed in all major ganglia, the vulva, and in the spermathecal valves; in the ventral nerve cord, pes-7 expression is detected in nuclei as well as in cell bodies and neural processes. WormBase CDS description: ras GTPase-activating protein like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F09F9.2 F09F9.2 P W All gene names: F09F9.2; CE04347; WBGene00017307; WP:CE04347; XE728
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F10D7.2 F10D7.2 P W All gene names: F10D7.2; F10D7.2.1; F10D7.2.2; CE04352; WBGene00017339; WP:CE04352; XR980 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: calcium alpha subunit; tetracycline resistance
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Transporters, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F10D7.3 F10D7.3 P W All gene names: F10D7.3; CE29754; WBGene00017340; WP:CE29754; XR988 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: glutaredoxin
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F10E7.4 F10E7.4 P W All gene names: F10E7.4; 2H409; CE32368; WBGene00017346; WP:CE32368 WormBase description: F-spondin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F10F2.3 F10F2.3 P W All gene names: F10F2.3; 3F705; CE00948; WBGene00008655; WP:CE00948 WormBase description: lipase (Bacillus subtilis)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F11E6.6 F11E6.6 P W All gene names: F11E6.6; 4S408; CE35464; WBGene00008709; WP:CE35464
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F11E6.8 F11E6.8 P W All gene names: F11E6.8; 4S388; CE19788; WBGene00008711; WP:CE19788 WormBase description: Eukaryotic protein kinase domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F13B6.1 F13B6.1 P W All gene names: F13B6.1; 4I223; CE16973; WBGene00017416; WP:CE16973
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, Reinke et al 2004, IVb male soma enriched genes, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F13B9.2 F13B9.2 P W All gene names: F13B9.2; CE04379; WBGene00017420; WP:CE04379; XI905
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown
F13D2.1 F13D2.1 P W All gene names: F13D2.1; CE37347; WBGene00008735; WP:CE37347; XL784 WormBase description: alpha-1-macroglobulin-like domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F13G3.1 F13G3.1 P W All gene names: ztf-2; F13G3.1; 1H871; CE05613; WBGene00008762; WP:CE05613 WormBase description: Zinc finger, C2H2 type
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F13H6.1 F13H6.1 P W All gene names: F13H6.1; 5G841; CE30755; WBGene00017430; WP:CE30755 WormBase description: zinc-finger protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F14B6.2 F14B6.2 P W All gene names: F14B6.2; 1M812; CE25855; WBGene00008783; WP:CE25855
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F14F3.3 F14F3.3 P W All gene names: tag-289; F14F3.3; CE02189; WBGene00008806; WP:CE02189; XL142
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed oogenesis soma, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F15A2.7 F15A2.7 P W All gene names: F15A2.7; CE05636; WBGene00008836; WP:CE05636; XO109
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F15B9.8 F15B9.8 P W All gene names: F15B9.8; 5N471; CE20686; WBGene00008851; WP:CE20686 WormBase description: Thrombospondin type 1 domain
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F15E6.2 F15E6.2 P W All gene names: F15E6.2; 4F67; CE36293; WBGene00017483; WP:CE36293
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F16B4.4 F16B4.4 P W All gene names: F16B4.4; 5C73; CE17014; WBGene00017506; WP:CE17014
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
F16F9.2 F16F9.2 P W All gene names: dpy-6; F16F9.2; CE30956; NM_077034; WBGene00001068; WP:CE30956; XJ70 WormBase description: dpy-6 encodes a novel, conserved protein; dpy-6 activity is required for normal body morphology.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F16H11.5 F16H11.5 P W All gene names: nhr-45; F16H11.5; CE33052; NM_076396; WBGene00003635; WP:CE33052; XF276 WormBase description: zinc finger DNA-binding protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F17A9.4 F17A9.4 P W All gene names: F17A9.4; 5G590; CE09448; WBGene00017536; WP:CE09448
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F18A11.2 F18A11.2 P W All gene names: F18A11.2; 2N325; CE09452; WBGene00008929; WP:CE09452 WormBase description: retinal-binding like protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F18F11.4 F18F11.4 P W All gene names: F18F11.4; 4B87; CE39243; WBGene00017577; WP:CE39243 WormBase description: serine/threonine-protein kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F19B2.5 F19B2.5 P W All gene names: F19B2.5; F19B2.C; 5U632; CE20697; WBGene00008944; WP:CE20697
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Zhang et al 2002, T1 mec-3 dependent genes
F19C7.8 F19C7.8 P W All gene names: F19C7.8; 4F376; CE31685; CE31686; WBGene00017597; WP:CE31685; WP:CE31686
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F19H6.1 F19H6.1 P W All gene names: F19H6.1; CE31484; WBGene00008956; WP:CE31484; XN8 WormBase description: serine/threonine kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F19H8.2 F19H8.2 P W All gene names: F19H8.2; 2O888; CE15871; WBGene00008963; WP:CE15871
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F20G2.3 F20G2.3 P W All gene names: F20G2.3; 5O246; CE09506; WBGene00008987; WP:CE09506
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F21C10.8 F21C10.8 P W All gene names: pqn-31; F21C10.8; 5J591; CE07123; CE35283; WBGene00004119; WP:CE07123; WP:CE35283 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed sperm soma, Reinke et al 2004, fem3 enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F21G4.1 F21G4.1 P W All gene names: F21G4.1; F21G4.1.1; F21G4.1.2; CE37359; WBGene00009023; WP:CE37359; XK508 WormBase description: Rat prostoglandin transporter like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F21G4.3 F21G4.3 P W All gene names: F21G4.3; CE09549; WBGene00009024; WP:CE09549; XK513
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 Resveratrol regulate WT
F22A3.5 F22A3.5 P W All gene names: ceh-60; F22A3.5; CE38506; WBGene00017690; WP:CE38506; XH142 WormBase description: homeotic protein PBX2
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, GO categories, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2 sir-2.1 regulated
F22B7.10 F22B7.10 P W All gene names: dpy-19; F22B7.10; 3J750; CE26462; NM_066508; WBGene00001078; WP:CE26462 WormBase description: The dpy-19 gene encodes a novel transmembrane protein whose human homolog is expressed in brain, and that is required for correct polarization and migration of the neuroblasts QL and QR.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F22F4.1 F22F4.1 P W All gene names: F22F4.1; CE07126; WBGene00017716; WP:CE07126; XG625
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F23F1.4 F23F1.4 P W All gene names: F23F1.4; 2A318; CE32635; WBGene00017745; WP:CE32635
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F23H12.4 F23H12.4 P W All gene names: col-1; dpy-15; sqt-3; F23H12.4; F23H12.4.1; F23H12.4.2; 5M833; CE05707; NM_073694; WBGene00005018; WP:CE05707 WormBase description: collagen
Member of lists (Publications lists):
Baugh et al 2005, PAL-1 target genes, Golden et al 2004, daf-2 differentially expressed , Golden et al 2004, N2 vs daf-2 different genes at , ReichertK et al 2005 T2 xenobiotic induced Collag, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 Resveratrol regulate WT, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
F23H12.5 F23H12.5 P W All gene names: F23H12.5; 5M843; CE05708; WBGene00009094; WP:CE05708 WormBase description: Thrombospondin type 1 domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F25B4.6 F25B4.6 P W All gene names: phi-50; F25B4.6; 5G164; CE09624; WBGene00017769; WP:CE09624 WormBase description: F25B4.6 is orthologous to the human gene 3-HYDROXY-3-METHYLGLUTARYL COA SYNTHASE (HMGCS2; OMIM:600234), which when mutated leads to disease. WormBase CDS description: hydroxymethlglutaryl-CoA synthase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F25B5.1 F25B5.1 P W All gene names: F25B5.1; 3H59; CE39493; CE39494; WBGene00017773; WP:CE39493; WP:CE39494
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F25D1.3 F25D1.3 P W All gene names: F25D1.3; 5L9; CE31917; WBGene00009108; WP:CE31917
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F25H8.6 F25H8.6 P W All gene names: F25H8.6; 4K689; CE05731; WBGene00009133; WP:CE05731
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F26A1.9 F26A1.9 P W All gene names: F26A1.9; 3F910; CE29287; WBGene00017807; WP:CE29287
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F26A10.2 F26A10.2 P W All gene names: F26A10.2; CE02692; WBGene00017814; WP:CE02692; XI252 WormBase description: F26A10.2 encodes a protein with four zinc-finger domains and a glutamine/asparagine-rich domain, that is required for maintenance of the germline and for locomotion; F26A10.2(RNAi) animals are uncoordinated and have sterile progeny. WormBase CDS description: Zinc finger
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F26E4.3 F26E4.3 P W All gene names: F26E4.3; 1K340; CE17714; WBGene00009158; WP:CE17714 WormBase description: cysteine protease
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003 S4 genes pass two-wayANOVA P0
F26G1.5 F26G1.5 P W All gene names: F26G1.5; 2F60; CE02697; WBGene00017841; WP:CE02697
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F27C8.1 F27C8.1 P W All gene names: aat-1; F27C8.1; 4K364; CE03266; NM_069306; WBGene00000002; WP:CE03266 WormBase description: aat-1 encodes an amino acid transporter catalytic subunit; when co-expressed in Xenopus oocytes with the ATG-2 glycoprotein subunit, AAT-1 is able to facilitate amino acid uptake and exchange, showing a relatively high affinity for small and some large neutral amino acids; in addition, AAT-1 is able to covalently associate with ATG-2 or ATG-1 to form heterodimers in the Xenopus expression system; when co-expressed with ATG-2, AAT-1 localizes to the cell surface of oocytes, but when expressed alone or with ATG-1, AAT-1 localizes intracellularly. WormBase CDS description: integral membrane protein E16 like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F27C8.3 F27C8.3 P W All gene names: F27C8.3; 4K360; CE03268; WBGene00009184; WP:CE03268
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F27D9.5 F27D9.5 P W All gene names: F27D9.5; CE04451; WBGene00017864; WP:CE04451; XI276 WormBase description: The F27D9.5 gene encodes an ortholog of the human gene PROPIONYL-COA CARBOXYLASE ALPHA SUBUNIT (PCCA), which when mutated leads to propionicaciduria, type I (OMIM:232000). WormBase CDS description: Propionyl-coA carboxylase alpha chain precursor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F27D9.6 F27D9.6 P W All gene names: dhs-29; F27D9.6; CE28011; NM_076893; WBGene00000992; WP:CE28011; XI282
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F27E5.4 F27E5.4 P W All gene names: phas-1; phg-1; F27E5.4; 2K425; CE30964; NM_063785; WBGene00004017; WP:CE30964 WormBase description: growth arrest protein extracellular domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F28C6.5 F28C6.5 P W All gene names: F28C6.5; 2I891; CE03276; WBGene00009205; WP:CE03276
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F28D1.11 F28D1.11 P W All gene names: F28D1.11; 4N157; CE20732; WBGene00009219; WP:CE20732
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F28G4.4 F28G4.4 P W All gene names: F28G4.4; 5Q762; CE35511; WBGene00009229; WP:CE35511
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F29C12.1 F29C12.1 P W All gene names: pqn-32; F29C12.1; F29C12.1a.1; F29C12.1a.2; 2N399; CE19820; CE37902; WBGene00004120; WP:CE19820; WP:CE37902 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F29G6.1 F29G6.1 P W All gene names: F29G6.1; CE34177; WBGene00009257; WP:CE34177; XM127 WormBase description: kazal-type proteinase inhibitor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Proteases, ViswanathanM et al 2005 S2 sir-2.1 regulated
F29G9.4 F29G9.4 P W All gene names: evl-5; fos-1; F29G9.4; 5G495; CE27375; CE39151; WBGene00001345; WBGene00017932; WP:CE27375; WP:CE39151 WormBase description: fos-1 encodes two basic region-leucine zipper (bZip) transcription factors, FOS-1A and FOS-1B, that are the sole C. elegans orthologs of the fos bZip transcription factor family; during hermaphrodite development, FOS-1A activity is required cell autonomously in the gonadal anchor cell for basement-membrane removal and subsequent anchor cell invasion of the vulval epithelium; in addition, fos-1 activity is also required for proper vulval and uterine development, fertility, and oogenesis; in late-L3 larvae, a FOS-1A translational fusion protein is expressed at high levels in the anchor cell nucleus and at lower levels in uterine cells, while a FOS-1B reporter is expressed at low levels in the anchor cell, uterine, and vulval cells; transcriptional reporters additionally reveal that fos-1b is expressed in most cells of late L3 larvae; in affecting anchor cell invasion, FOS-1A appears to act by regulating the expression of three AC-expressed genes: cdh-3/cadherin, him-4/hemicentin, and zmp-1/matrix metalloproteinase, which likely function together to promote anchor cell invasion.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F30F8.5 F30F8.5 P W All gene names: F30F8.5; 1I424; CE37511; WBGene00009274; WP:CE37511
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F31C3.6 F31C3.6 P W All gene names: F31C3.6; 1P646; CE24930; WBGene00009288; WP:CE24930
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F31F6.5 F31F6.5 P W All gene names: daf-6; ptr-7; F31F6.5; CE38955; NM_078071; WBGene00000902; WP:CE38955; XP511 WormBase description: daf-6 is required for an unidentified function of the nonneuronal amphidial sheath cells that promotes correct morphology of both the amphid and the outer labial sensilla; daf-6 mutants disrupt the joining of the amphid sheath and socket cells to form the receptor channel, and display defects in several distinct functions including formation of dauer larvae, chemotaxis, osmotic avoidance, male mating, negative regulation of lifespan, negative regulation of ASJ's axonal growth late in development, and dye uptake by amphids and phasmids; daf-6 has recently been reported to be identical to the coding sequence ptr-7/F31F6.5, but this assertion has not yet been verified by transgenic rescue.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F32B5.7 F32B5.7 P W All gene names: F32B5.7; F32B5.7.1; F32B5.7.2; 1D242; CE30526; WBGene00017980; WP:CE30526
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S8 SAGE genes in the dauer exit
F32D8.7 F32D8.7 P W All gene names: F32D8.7; 5L379; CE05786; WBGene00009331; WP:CE05786 WormBase description: Kunitz/Bovine pancreatic trypsin inhibitor domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F32E10.3 F32E10.3 P W All gene names: F32E10.3; 4I337; CE37227; WBGene00017991; WP:CE37227 WormBase description: LDL-receptor ligand-binding repeat
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F32F2.1 F32F2.1 P W All gene names: uig-1; F32F2.1; 5N754; CE18658; WBGene00009337; WP:CE18658 WormBase description: Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F33C8.1 F33C8.1 P W All gene names: tag-53; F33C8.1; CE32400; CE32401; WBGene00006432; WP:CE32400; WP:CE32401; XP337 WormBase description: tag-53 encodes a protein with high similarity to human Attractin, and affects fertility and locomotion.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F33D11.3 F33D11.3 P W All gene names: col-54; F33D11.3; 1G421; CE09893; NM_059293; WBGene00000631; WP:CE09893 WormBase description: collagen
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F33E2.2 F33E2.2 P W All gene names: dlk-1; F33E2.2; 1N158; CE36153; CE36154; CE36155; WBGene00001008; WP:CE36153; WP:CE36154; WP:CE36155 WormBase description: dlk-1 encodes a homolog of mammalian mitogen-activated protein kinase kinase kinase 12; DLK-1 is dispensable for embryonic development and gross morphology in mass RNAi screens.
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S8 SAGE genes in the dauer exit
F33H2.8 F33H2.8 P W All gene names: F33H2.8; 1P622; CE37514; WBGene00009371; WP:CE37514
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F35B12.4 F35B12.4 P W All gene names: F35B12.4; 5M90; CE05803; WBGene00009384; WP:CE05803 WormBase description: serine protease inhibitor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F35B12.7 F35B12.7 P W All gene names: nlp-24; F35B12.7; F35B12.7.1; F35B12.7.2; 5M97; CE37515; NM_073545; WBGene00003762; WP:CE37515
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F35D2.1 F35D2.1 P W All gene names: F35D2.1; 2H865; CE02723; WBGene00018039; WP:CE02723
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F35E12.8 F35E12.8 P W All gene names: F35E12.8; 5O230; CE32403; WBGene00009432; WP:CE32403
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F35E12.9 F35E12.9 P W All gene names: F35E12.9; 5O222; CE32404; CE38514; WBGene00009433; WP:CE32404; WP:CE38514
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F35F10.6 F35F10.6 P W All gene names: F35F10.6; 5D762; CE09931; WBGene00018056; WP:CE09931
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S6 removed genes of contamination
F35G12.6 F35G12.6 P W All gene names: mab-21; F35G12.6; 3F691; CE32651; NM_065539; WBGene00003112; WP:CE32651 WormBase description: mab-21 encodes a novel protein that is a member of a highly conserved family of proteins with Drosophila and vertebrate orthologs; MAB-21 is cell-autonomously required for specifying the identity of sensory ray 6 in the male tail, and also for backward locomotion, normal body morphology, fecundity, and embryonic morphogenesis; MAB-21 expression begins in embryonic hypodermal cells and continues in larval and adult animals in hypodermis, anterior and ventral cord neurons, some body wall muscles, and ray cells.
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1 target genes, Baugh et al 2005, PAL-1 target genes, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Early genes, Wang et al 2003 S4 genes pass two-wayANOVA P0
F35H10.10 F35H10.10 P W All gene names: CELF35-1; F35H10.10; 4J72; CE24945; WBGene00018073; WP:CE24945
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F36A4.10 F36A4.10 P W All gene names: alpha-collagen; col-34; ram-4; F36A4.10; 4F8; CE07185; NM_068119; WBGene00000611; WP:CE07185 WormBase description: col-34 encodes a cuticle collagen protein and is a critical component of male tail cuticle organization affecting ray morphology. WormBase CDS description: cuticular collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
F36G3.1 F36G3.1 P W All gene names: F36G3.1; CE15979; WBGene00009482; WP:CE15979; XK400
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F36H5.1 F36H5.1 P W All gene names: math-26; F36H5.1; F36H5.1.1; F36H5.1.2; 2C63; CE27156; WBGene00018100; WP:CE27156 WormBase description: The F36H5.1 gene encodes a protein closely similar to F36H5.2, which has a meprin-associated Traf homology (MATH) domain and may be involved in apoptosis.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F37C4.4 F37C4.4 P W All gene names: F37C4.4; F37C4.4b.1; F37C4.4b.2; 4E635; CE17047; CE31505; WBGene00018144; WP:CE17047; WP:CE31505
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F38A1.10 F38A1.10 P W All gene names: F38A1.10; 4B998; CE10022; WBGene00009523; WP:CE10022 WormBase description: receptor like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F38A3.2 F38A3.2 P W All gene names: col-82; ram-2; ram-3; F38A3.2; 2L306; CE02214; NM_063961; WBGene00004300; WP:CE02214 WormBase description: ram-2 encodes a cuticle collagen that interacts with unc-6 to affect ray cell migration, and interacts with unc-5 and unc-6 to affect embryonic viability; also affects ray morphology in males such that the structural cells and the hypodermis of the rays are swollen in mutants. WormBase CDS description: collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
F38A6.1 F38A6.1 P W All gene names: Ce-fkh-1; fkh-1; pha-4; F38A6.1; 5V229; CE15998; NM_075605; WBGene00004013; WP:CE15998 WormBase description: Fork head domain, eukaryotic transcription factors
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S8 SAGE genes in the dauer exit
F38E11.3 F38E11.3 P W All gene names: cpin-1; F38E11.3; 4K215; CE26624; NM_069268; WBGene00000775; WP:CE26624 WormBase description: cpi-1 is orthologous to a mammalian protein variously identified as guanine aminohydrolase (or guanine deaminase, or guanase), cypin, or p51-nedasin.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F40A3.3 F40A3.3 P W All gene names: F40A3.3; F40A3.3b.1; F40A3.3b.2; 5I359; CE10146; CE38516; WBGene00018218; WP:CE10146; WP:CE38516 WormBase description: phosphatidylethanolamine binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed oogenesis soma, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F40A3.6 F40A3.6 P W All gene names: F40A3.6; 5I372; CE10152; WBGene00018221; WP:CE10152
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F40E10.3 F40E10.3 P W All gene names: csq-1; F40E10.3; F40E10.3.1; F40E10.3.2; CE05839; NM_078037; WBGene00000822; WP:CE05839; XP305 WormBase description: calsequestrin like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Roy et al 2002 S2 positivecontrol L1 muscle, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
F40E10.5 F40E10.5 P W All gene names: F40E10.5; CE05840; NM_078040; WBGene00009573; WP:CE05840; XP321
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S6 removed genes of contamination
F40F4.7 F40F4.7 P W All gene names: F40F4.7; CE28316; WBGene00018238; WP:CE28316; XD864
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F40F9.5 F40F9.5 P W All gene names: F40F9.5; 5K202; CE37834; WBGene00009582; WP:CE37834 WormBase description: translocase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F41B4.4 F41B4.4 P W All gene names: glr-6; F41B4.4; CE30983; CE35715; NM_171712; NM_171713; WBGene00001617; WP:CE30983; WP:CE35715; XH456 WormBase description: ligand-gated ionic channel
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F41C3.11 F41C3.11 P W All gene names: F41C3.11; 2F24; CE37372; WBGene00018275; WP:CE37372
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F41C3.7 F41C3.7 P W All gene names: F41C3.7; 2F25; CE39935; WBGene00018273; WP:CE39935
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
F41C6.1 F41C6.1 P W All gene names: unc-106; unc-6; F41C6.1; F41C6.1.1; F41C6.1.2; CE04538; NM_076764; WBGene00006746; WP:CE04538; XH515 WormBase description: unc-6 encodes a netrin orthologous to the human and mouse netrin-1 precursor proteins; UNC-6 functions as a guidance molecule that regulates the migrations of pioneer axons and mesodermal cells, such as the gonadal distal tip cell, along the dorsoventral axis; a secreted molecule, UNC-6 is expressed during embryogenesis by epidermoblasts and neurons; UNC-6 is involved in both attractive and repulsive interactions that are mediated by the UNC-40 and UNC-5 netrin receptors, respectively.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F41C6.5 F41C6.5 P W All gene names: col-173; F41C6.5; CE04542; NM_076761; WBGene00000746; WP:CE04542; XH494 WormBase description: cuticular collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F41D9.2 F41D9.2 P W All gene names: F41D9.2; CE10238; WBGene00018282; WP:CE10238; XJ2
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F41E6.14 F41E6.14 P W All gene names: F41E6.14; 5J112; CE10270; WBGene00018295; WP:CE10270
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F41F3.3 F41F3.3 P W All gene names: F41F3.3; F41F3.3.1; F41F3.3.2; 5F126; CE07217; WBGene00018297; WP:CE07217 WormBase description: cuticlin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed sperm soma, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, fem3 enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F42E11.4 F42E11.4 P W All gene names: tni-1; F42E11.4; CE03311; NM_077505; WBGene00006584; WP:CE03311; XL994 WormBase description: tni-1 encodes a member of the troponin family that affects body morphology, locomotion, egg laying, and epithelial morphogenesis in a large-scale RNAi analysis. WormBase CDS description: troponin I
Member of lists (Publications lists):
Lund et al 2002 Aging time course Fig3A muscle, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F42G8.11 F42G8.11 P W All gene names: sph-1; F42G8.11; 4I896; CE17070; NM_068959; WBGene00004979; WP:CE17070 WormBase description: sph-1 encodes a member of the synaptophysin/synaptoporin family that contains a MARVEL domain, a membrane-associating domain found in lipid-associating proteins, and contains a transmembrane domain. WormBase CDS description: synaptic vesicle channel protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F42G9.2 F42G9.2 P W All gene names: cyn-6; cyp-6; F42G9.2; 3B391; CE01301; NM_064856; WBGene00000882; WP:CE01301 WormBase description: cyp-6 encodes a cyclophilin most similar to human secreted cyclophilin type B isoforms that is functional when expressed in E. coli; it is expressed in the intestine.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F42H10.3 F42H10.3 P W All gene names: F42H10.3; 3J577; CE37108; WBGene00018367; WP:CE37108
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F42H10.4 F42H10.4 P W All gene names: F42H10.4; WBGene00018368
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated genes, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F43B10.2 F43B10.2 P W All gene names: tag-343; F43B10.2; CE35536; WBGene00018374; WP:CE35536; XR280
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F43C9.1 F43C9.1 P W All gene names: F43C9.1; CE04564; WBGene00018375; WP:CE04564; XF415 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F43D9.1 F43D9.1 P W All gene names: F43D9.1; 3L589; CE32661; WBGene00009653; WP:CE32661 WormBase description: Band 4.1 domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F44A2.5 F44A2.5 P W All gene names: F44A2.5; F44A2.5a.1; F44A2.5a.2; 5J781; CE33088; CE33089; WBGene00018405; WP:CE33088; WP:CE33089
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F44E2.4 F44E2.4 P W All gene names: F44E2.4; 3J922; CE28232; WBGene00018418; WP:CE28232
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 Resveratrol regulate WT, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F44E5.4 F44E5.4 P W All gene names: F44E5.4; F44E5.4.1; F44E5.4.2; 2M48; CE18679; WBGene00009691; WP:CE18679 WormBase description: Heat shock hsp70 proteins
Member of lists (Publications lists):
Custodia et al 2001 T2 heat shock, GuhaThakurta et al 2002 T1 upregu on heat stress, Lund et al 2002 Aging time course Fig2C heatshock, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig2a heat shock, Shen et al 2005 T1 hif-1indepen hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated
F44E5.5 F44E5.5 P W All gene names: F44E5.5; F44E5.5.1; F44E5.5.2; 2M51; WBGene00009692 WormBase description: Heat shock hsp70 proteins
Member of lists (Publications lists):
Custodia et al 2001 T2 heat shock, GuhaThakurta et al 2002 T1 upregu on heat stress, Lund et al 2002 Aging time course Fig2C heatshock, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig2a heat shock, Shen et al 2005 T1 hif-1indepen hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated
F44F4.4 F44F4.4 P W All gene names: ptr-8; F44F4.4; 2L183; CE01000; NM_063942; WBGene00004222; WP:CE01000 WormBase description: ptr-8 encodes a member of the Patched superfamily.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F44G3.6 F44G3.6 P W All gene names: skr-3; F44G3.6; F44G3.6.1; F44G3.6.2; 5Q603; CE16037; NM_074658; WBGene00004809; WP:CE16037 WormBase description: The skr-3 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-3(RNAi) animals are at least superficially normal.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F45D3.2 F45D3.2 P W All gene names: F45D3.2; F45D3.2.1; F45D3.2.2; 5N21; CE38517; WBGene00009722; WP:CE38517
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 Resveratrol regulate WT, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F45F2.4 F45F2.4 P W All gene names: his-7; F45F2.4; 5J13; NM_072797; WBGene00001881 WormBase description: his-7 encodes an H2A histone. WormBase CDS description: histone H2A
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F45H10.4 F45H10.4 P W All gene names: drr-1; F45H10.4; 2N786; CE10548; WBGene00009741; WP:CE10548
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
F45H7.4 F45H7.4 P W All gene names: prk-2; F45H7.4; F45H7.4.1; F45H7.4.2; 3E454; CE31517; NM_065295; WBGene00004183; WP:CE31517 WormBase description: serine/threonine kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F46B3.5 F46B3.5 P W All gene names: grd-2; F46B3.5; 5V83; CE34022; NM_075576; WBGene00001691; WP:CE34022 WormBase description: grd-2 encodes a predicted secreted protein that is similar to vertebrate desert hedgehog (Dhh) proteins (OMIM:605423, mutated in partial gonadal dysgenesis accompanied by minifascicular neuropathy); by homology, GRD-2 is predicted to be involved in cell communication, but as loss of grd-2 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of GRD-2 in C. elegans development and/or behavior is not yet known; the grd-2 expression pattern has not been reported.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B
F46C3.3 F46C3.3 P W All gene names: hum-4; F46C3.3; CE39575; NM_077513; WBGene00002037; WP:CE39575; XM40 WormBase description: hum-4 encodes a class XII myosin, an unconventional myosin. WormBase CDS description: myosin like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F46C8.1 F46C8.1 P W All gene names: F46C8.1; CE04576; WBGene00018484; WP:CE04576; XI169
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F46C8.6 F46C8.6 P W All gene names: dpy-7; F46C8.6; F46C8.6.1; F46C8.6.2; CE04580; NM_076873; WBGene00001069; WP:CE04580; XI156 WormBase description: dpy-7 encodes a cuticular collagen; DPY-7 functions as a structural constituent of the extracellular cuticle whose activity is required for normal cuticular morphology and hence, proper body form. WormBase CDS description: cuticle collagen
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic induced Collag, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, IVb male soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
F46C8.8 F46C8.8 P W All gene names: F46C8.8; CE35539; WBGene00018487; WP:CE35539; XI170
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F46E10.9 F46E10.9 P W All gene names: dpy-11; F46E10.9; F46E10.9.1; F46E10.9.2; F46E10.9.3; F46E10.E; 5G992; CE20819; NM_072254; WBGene00001073; WP:CE20819 WormBase description: dpy-11 encodes a membrane- associated thioredoxin- like (TRX) protein that affects body shape and ray morphology; the TRX domain displays catalytic activity in vitro, and dpy-11 is expressed in cytoplasm of hypodermis. WormBase CDS description: thioredoxin
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed oogenesis soma, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F46F2.2 F46F2.2 P W All gene names: kin-20; F46F2.2; F46F2.2a.1; F46F2.2a.2; F46F2.2d.1; F46F2.2d.2; CE38356; CE38358; CE38359; CE39502; NM_078132; NM_182447; WBGene00002203; WP:CE38356; WP:CE38358; WP:CE38359; WP:CE39502; XP888 WormBase description: casein kinase I (epsilon/delta)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F46G11.1 F46G11.1 P W All gene names: F46G11.1; CE37646; WBGene00018514; WP:CE37646; XG415 WormBase description: F46G11.1 is orthologous to the human gene TRUNCATED PUTATIVE T7-LIKE MITOCHONDRIAL DNA HELICASE (C10orf2; OMIM:606075), which when mutated leads to disease.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F46G11.2 F46G11.2 P W All gene names: F46G11.2; CE38520; WBGene00018515; WP:CE38520; XG405
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F46H5.7 F46H5.7 P W All gene names: F46H5.7; F46H5.7a.1; F46H5.7a.2; F46H5.7c.1; F46H5.7c.2; CE04593; CE31170; CE34026; WBGene00018522; WP:CE04593; WP:CE31170; WP:CE34026; XH858
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1 elongate lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F47B7.7 F47B7.7 P W All gene names: F47B7.7; CE35544; WBGene00018538; WP:CE35544; XE398
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F47B8.5 F47B8.5 P W All gene names: F47B8.5; 5O806; CE10640; WBGene00009806; WP:CE10640
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F48F7.1 F48F7.1 P W All gene names: alg-1; F48F7.1; CE31525; NM_077921; WBGene00000105; WP:CE31525; XO573 WormBase description: A homolog of rde-1 that is involved in RNA interference and affects developmental timing along with alg-2 and dcr-1 by regulating expression of the lin-4 and let-7 small temporal RNAs.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F49B2.5 F49B2.5 P W All gene names: kin-22; src-2; F49B2.5; 1O919; CE24991; NM_061101; WBGene00005078; WP:CE24991 WormBase description: Src homology domain 2, Src homology domain 3, protein tyrosine kinase (src subfamily)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F49C12.14 F49C12.14 P W All gene names: F49C12.14; 4K88; CE03374; WBGene00009883; WP:CE03374
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F49E11.2 F49E11.2 P W All gene names: F49E11.2; 4N800; CE35551; WBGene00009889; WP:CE35551 WormBase description: adenosine receptor like protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F49E12.6 F49E12.6 P W All gene names: F49E12.6; 2I705; CE37018; WBGene00009899; WP:CE37018 WormBase description: The F49E12.6 gene encodes a protein with two E2F domains that may be involved in apoptosis. WormBase CDS description: RBB3 like protein
Member of lists (Publications lists):
Jiang et al 2001 Fig3 Rb complex genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F49H12.5 F49H12.5 P W All gene names: F49H12.5; CE20835; WBGene00018656; WP:CE20835; XC693
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F52B11.3 F52B11.3 P W All gene names: noah-2; phi-55; F52B11.3; F52B11.3.1; F52B11.3.2; 4O859; CE18723; WBGene00009926; WP:CE18723
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F52D1.3 F52D1.3 P W All gene names: pqn-40; F52D1.3; CE37115; NM_075703; WBGene00004127; WP:CE37115; XB70 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F52D10.6 F52D10.6 P W All gene names: F52D10.6; CE03392; WBGene00009932; WP:CE03392; XM201 WormBase description: PH (pleckstrin homology) domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F52E4.6 F52E4.6 P W All gene names: wrt-2; F52E4.6; CE07273; NM_076128; WBGene00006948; WP:CE07273; XD712 WormBase description: wrt-2 encodes a (potentially secreted) protein, expressed in seam cells and hypodermal syncytia, with similarity to the carboxy-terminal autoprocessing domain of Drosophila hedgehog; WRT-2 also contains a glutamine/asparagine-rich domain.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
F52H2.3 F52H2.3 P W All gene names: F52H2.3; CE10868; WBGene00018715; WP:CE10868; XD156
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B
F52H3.1 F52H3.1 P W All gene names: let-268; F52H3.1; F52H3.1.1; F52H3.1.2; F52H3.1.3; 2K324; CE03397; NM_063769; WBGene00002497; WP:CE03397 WormBase description: let-268 encodes a procollagen lysyl hydroxylase that processes type IV collagen, a collagen secreted and incorporated into the basement membrane during embryogenesis (and encoded partly by emb-9); LET-268 activity is essential for type IV collagen processing and secretion and for the stability, but not the formation of, the basement membrane that provides mechanical support to body wall muscle once contraction begins; LET-268 also appears to be required for pharyngeal muscle contraction. WormBase CDS description: procollagen-lysine,2-oxoglutarate 5-dioxygenase precusor
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F53B1.4 F53B1.4 P W All gene names: F53B1.4; CE04644; WBGene00018737; WP:CE04644; XC730 WormBase description: thymidine diphosphoglucose 4,6-dehydratase
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F53B1.5 F53B1.5 P W All gene names: F53B1.5; WBGene00043352
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F53B3.6 F53B3.6 P W All gene names: F53B3.6; CE04446; WBGene00018744; WP:CE04446; XD483 WormBase description: zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F53G12.3 F53G12.3 P W All gene names: F53G12.3; 1A615; CE24999; WBGene00018771; WP:CE24999 WormBase description: F53G12.3 encodes a large partial homolog of dual oxidase ('Ce-Duox2'), with an N-terminal peroxidase domain, two central calmodulin-binding EF hands, and a C-terminal superoxide-generating NADPH-oxidase domain; F53G12.3 may be required for dityrosine cross-linking of collagen, and thus for cuticular integrity; F53G12.3 may use cytosolic NADPH to generate reactive oxygen, which then may drive the peroxidase ectodomain to cross-link free tyrosine in collagen; F53G12.3 has no visible expression pattern detectable by antibodies, implying very low or rare expression.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F53H4.5 F53H4.5 P W All gene names: F53H4.5; CE35554; WBGene00010010; WP:CE35554; XQ501 WormBase description: SAND domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F54A5.1 F54A5.1 P W All gene names: F54A5.1; F54A5.1.1; F54A5.1.2; F54A5.E; 1B465; CE20859; WBGene00018786; WP:CE20859
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed oogenesis soma, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003 S4 Early genes, Wang et al 2003 S4 genes pass two-wayANOVA P0
F54C9.1 F54C9.1 P W All gene names: iff-2; F54C9.1; F54C9.1.1; F54C9.1.2; F54C9.1.3; 2I850; CE02249; NM_063406; WBGene00002065; WP:CE02249 WormBase description: initiation factor 5A
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F54F2.1 F54F2.1 P W All gene names: F54F2.1; 3J913; CE00194; NM_066547; WBGene00018832; WP:CE00194 WormBase description: Vitronectin receptor alpha subunit
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F55A12.4 F55A12.4 P W All gene names: dhs-2; F55A12.4; 1F923; CE11123; CE26924; CE33397; NM_059174; NM_182014; NM_182015; WBGene00000966; WP:CE11123; WP:CE26924; WP:CE33397 WormBase description: dhs-2 encodes a short-chain dehydrogenase predicted to be mitochondrial.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F55A4.8 F55A4.8 P W All gene names: F55A4.8; F55A4.8c.1; F55A4.8c.2; CE19463; CE31182; CE31183; WBGene00018860; WP:CE19463; WP:CE31182; WP:CE31183; XB658
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F55D10.2 F55D10.2 P W All gene names: rpl-25.1; F55D10.2; F55D10.2.1; F55D10.2.2; CE02777; NM_076407; WBGene00004438; WP:CE02777; XF335 WormBase description: rpl-25.1 encodes a large ribosomal subunit L23a protein. WormBase CDS description: Ribosomal protein L23
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F55D12.2 F55D12.2 P W All gene names: F55D12.2; 1I469; CE32439; WBGene00010111; WP:CE32439
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F55E10.6 F55E10.6 P W All gene names: F55E10.6; CE02786; WBGene00018885; WP:CE02786; XI964 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: D-beta-hydroxybutyrate dehydrogenase (BDH)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F55F8.1 F55F8.1 P W All gene names: ptr-10; F55F8.1; F55F8.1.1; F55F8.1.2; 1G233; CE36938; NM_059257; WBGene00004224; WP:CE36938 WormBase description: ptr-10 encodes a member of the Patched superfamily.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F55H12.4 F55H12.4 P W All gene names: F55H12.4; 1J468; CE11212; WBGene00010135; WP:CE11212
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F56C11.1 F56C11.1 P W All gene names: bli-3; tag-31; F56C11.1; 1A620; CE28463; NM_058285; WBGene00000253; WP:CE28463 WormBase description: bli-3 encodes a large homolog of dual oxidase ('Ce-Duox1'), with an N-terminal peroxidase domain, two central calmodulin-binding EF hands, and a C-terminal superoxide-generating NADPH-oxidase domain; BLI-3 is required for dityrosine cross-linking of collagen, and thus for cuticular integrity; BLI-3 is thought to use cytosolic NADPH to generate reactive oxygen, which then drives the peroxidase ectodomain to cross-link free tyrosine in collagen; BLI-3 is expressed exclusively in hypodermal cells at low levels, with peaks of expression corresponding to collagen/cuticle biosynthesis.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F56C11.2 F56C11.2 P W All gene names: ptr-11; F56C11.2; 1A634; CE17902; NM_058286; WBGene00004225; WP:CE17902
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F56D12.2 F56D12.2 P W All gene names: F56D12.2; NM_061551; WBGene00043374
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F56D3.1 F56D3.1 P W All gene names: F56D3.1; F56D3.1.1; F56D3.1.2; F56D3.1.3; 2E439; CE29410; WBGene00018969; WP:CE29410
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Reinke et al 2004, IVb male soma enriched genes, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F56D6.1 F56D6.1 P W All gene names: clec-68; F56D6.1; 4E693; CE39162; WBGene00018970; WP:CE39162
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F56D6.2 F56D6.2 P W All gene names: clec-67; F56D6.2; 4E687; CE31546; WBGene00018971; WP:CE31546
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F56H1.1 F56H1.1 P W All gene names: che-14; ptd-1; F56H1.1; 1G329; CE28468; NM_059272; WBGene00000493; WP:CE28468 WormBase description: che-14 encodes a protein with a sterol-sensing domain; CHE-14 protein is involved in the exocytotic secretion of lipid-modified proteins at the apical surface of certain epithelial cells.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F57B9.9 F57B9.9 P W All gene names: pqn-46; F57B9.9; 3I32; CE33114; NM_066114; WBGene00004133; WP:CE33114 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F57C12.1 F57C12.1 P W All gene names: nas-38; F57C12.1; CE31188; NM_075719; WBGene00003554; WP:CE31188; XB181
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F57C12.4 F57C12.4 P W All gene names: mrp-2; F57C12.4; CE26370; NM_075720; WBGene00003408; WP:CE26370; XB184 WormBase description: mrp-2 encodes a predicted multidomain transmembrane protein that is a member of the ATP-binding cassette (ABC) superfamily of transport proteins and is homologous to the human multidrug resistance-associated protein 1 (MRP1, OMIM:158343); by homology, MRP-2 is predicted to function as a membrane pump that couples the energy of ATP hydrolysis to membrane transport; as loss of MRP-2 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of MRP-2 in C. elegans development and/or behavior is not yet known; mrp-2 expression is, however, upregulated early in the exit from the alternative dauer stage and then remains induced, suggesting that MRP-2 activity is required for the transition to, and maintenance of, a more active metabolic state. WormBase CDS description: ATP-binding transport family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F58A4.11 F58A4.11 P W All gene names: gei-13; F58A4.11; 3K722; CE00217; NM_066733; WBGene00001570; WP:CE00217 WormBase description: gei-13 encodes a protein, with a BED finger domain (predicted to be DNA-binding) and a glutamine/asparagine-rich domain; GEI-13 physically interacts with GEX-3, and is required for normal body shape, cuticle synthesis, and locomotion.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F58A6.4 F58A6.4 P W All gene names: nas-29; F58A6.4; 2F424; CE39943; NM_062552; WBGene00003547; WP:CE39943
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Proteases, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F58G1.5 F58G1.5 P W All gene names: F58G1.5; 2N224; CE17925; WBGene00010267; WP:CE17925
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F58G4.1 F58G4.1 P W All gene names: F58G4.1; 5I597; CE07306; WBGene00019064; WP:CE07306 WormBase description: myosin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F58H12.1 F58H12.1 P W All gene names: kin-29; sma-11; sns-8; F58H12.1; CE28479; NM_076092; WBGene00002210; WP:CE28479; XD464 WormBase description: kin-29 encodes a serine/threonine kinase with significant homology in the kinase domain to the AMP-activated protein kinase (AMPK) and SNF1 kinases; the AMP-kinase cascade is activated by cellular stresses that deplete ATP; AMP-kinase is believed to protect the mammalian cell by 'switching off' ATP-consuming pathways like fatty acid synthesis, by phosphorylating key regulatory enzymes, and switching on alternative pathways for ATP generation; kin-29 is involved in regulating the expression of chemosensory receptors and entry into the daur pathway; kin-29 also affects body size via interaction with the Sma/Mab pathway and lifespan, with mutants exhibiting a smaller body size and increased life span; a functional KIN-29-GFP fusion protein is expressed in sensory neurons and many other cell types, and localizes to the cytoplasm; under conditions of cellular stress like heat shock and starvation, KIN-29-GFP translocates to the nucleus. WormBase CDS description: serine/threonine-protein kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F59A3.1 F59A3.1 P W All gene names: F59A3.1; 1G97; CE30548; WBGene00019074; WP:CE30548 WormBase description: carboxypeptidase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F59B10.1 F59B10.1 P W All gene names: pqn-47; F59B10.1; 2K788; CE36940; NM_063861; WBGene00004134; WP:CE36940 WormBase description: pqn-47 encodes a protein with a glutamine/asparagine-rich domain, homologous to human C11orf9 and Drosophila CG3328, that is required for locomotion, vulval development, full body size, cuticular integrity, and general health in mass RNAi assays; pqn-47(cxP5915) homozygotes are sluggish.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
F59B10.3 F59B10.3 P W All gene names: F59B10.3; 2K803; CE35884; WBGene00010319; WP:CE35884 WormBase description: cadherin transmembranous domain
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S8 SAGE genes in the dauer exit, Wang et al 2003 S4 genes pass two-wayANOVA P0
F59B10.5 F59B10.5 P W All gene names: F59B10.5; 2K810; CE01594; WBGene00010321; WP:CE01594
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
F59C6.8 F59C6.8 P W All gene names: F59C6.8; 1L87; CE37526; WBGene00010327; WP:CE37526
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed sperm soma, Reinke et al 2004, fem3 enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
F59D12.2 F59D12.2 P W All gene names: F59D12.2; CE35566; WBGene00010330; WP:CE35566; XQ292
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F59D12.4 F59D12.4 P W All gene names: gpn-1; F59D12.4; CE26816; NM_078181; WBGene00001687; WP:CE26816; XQ301 WormBase description: gpn-1 encodes a glypican, a heparan sulfate proteoglycan anchored to the cell membrane by a GPI linkage, that is orthologous to Drosophila Dally-like (Dlp) and mammalian glypicans (OMIM:312870, mutated in Simpson-Golabi-Behmel overgrowth syndrome); by homology, GPN-1 is predicted to function as a cell surface protein that regulates intercellular signaling, perhaps within the context of cell division and growth regulation; however, as loss of gpn-1 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of GPN-1 in C. elegans development and/or behavior is not yet known. WormBase CDS description: glypican
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F59F5.6 F59F5.6 P W All gene names: syd-2; F59F5.6; CE03447; NM_077367; WBGene00006364; WP:CE03447; XL168 WormBase description: syd-2 encodes alpha-liprin, a member of the liprin family of proteins that interact with LAR (leukocyte common antigen related)-type receptor tyrosine phosphatases (RPTPs) to facilitate clustering of RPTPs to focal adhesions; SYD-2 is required for establishing normal presynaptic density, and is expressed in all neurons and muscles; SYD-2 is required cell autonomously in neurons for differentiation of presynaptic active zones, where SYD-2 is localized. WormBase CDS description: liprin-alpha
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Roy et al 2002 S3 muscle genes
H03A11.2 H03A11.2 P W All gene names: H03A11.2; CE32684; WBGene00010357; WP:CE32684; XP846
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
H03E18.1 H03E18.1 P W All gene names: H03E18.1; CE37653; WBGene00019148; WP:CE37653; XJ131
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
H08M01.2 H08M01.2 P W All gene names: H08M01.2; 4O597; CE36175; CE36176; WBGene00010374; WP:CE36175; WP:CE36176 WormBase description: GTPase-activator protein for Rho-like GTPases
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
H10E21.5 H10E21.5 P W All gene names: H10E21.5; 3A638; CE19490; WBGene00019185; WP:CE19490 WormBase description: zinc finger protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
H13N06.2 H13N06.2 P W All gene names: H13N06.2; CE35570; WBGene00010396; WP:CE35570; XQ109 WormBase description: von Willebrand factor type A domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
H14E04.1 H14E04.1 P W All gene names: H14E04.1; H14E04.F; 3D495; CE29973; WBGene00019198; WP:CE29973 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
H22K11.4 H22K11.4 P W All gene names: H22K11.4; CE37119; WBGene00019227; WP:CE37119; XH406 WormBase description: H22K11.4 is orthologous to the human gene SARCOGLYCAN, ALPHA (50KD DYSTROPHIN-ASSOCIATED GLYCOPROTEIN) (SGCA; OMIM:600119), which when mutated leads to disease.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
H23N18.5 H23N18.5 P W All gene names: H23N18.5; H23N18.A; 5F386; CE20987; WBGene00019236; WP:CE20987
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
H32C10.2 H32C10.2 P W All gene names: H32C10.2; 4G697; CE21004; WBGene00019256; WP:CE21004
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
H42K12.3 H42K12.3 P W All gene names: H42K12.3; H42K12.3.1; H42K12.3.2; CE11614; WBGene00019272; WP:CE11614; XB933
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
K01A2.5 K01A2.5 P W All gene names: K01A2.5; 2A593; CE19513; WBGene00019280; WP:CE19513
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Murphy et al 2003 Fig2 Class2 shorten lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
K01B6.1 K01B6.1 P W All gene names: fozi-1; K01B6.1; 3K385; CE00238; NM_066646; WBGene00010453; WP:CE00238 WormBase description: K01B6.1 encodes a protein with a zinc-finger domain, a formin homology 2 domain, and a glutamine/asparagine-rich domain; it is dispensable, in RNAi assays, for viability and gross anatomy. WormBase CDS description: Zinc-finger motif C2H2 type
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
K01D12.5 K01D12.5 P W All gene names: K01D12.5; 5M879; CE34198; WBGene00010464; WP:CE34198
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
K02E10.4 K02E10.4 P W All gene names: K02E10.4; CE30083; CE37250; WBGene00019318; WP:CE30083; WP:CE37250; XD105
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
K02E10.7 K02E10.7 P W All gene names: K02E10.7; CE31194; WBGene00019321; WP:CE31194; XD120 WormBase description: protein kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
K02G10.5 K02G10.5 P W All gene names: K02G10.5; CE04705; WBGene00019346; WP:CE04705; XF308 WormBase description: zinc-finger DNA-binding protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
K03E6.6 K03E6.6 P W All gene names: pfn-3; K03E6.6; CE07332; NM_075804; WBGene00003991; WP:CE07332; XB698 WormBase description: Profilin
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed sperm soma, Reinke et al 2004, fem3 enriched genes, Reinke et al 2004, list of genes in cluster B
K04A8.6 K04A8.6 P W All gene names: F46E10.A; K04A8.6; 5H14; CE27388; WBGene00019377; WP:CE27388 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
K05F1.10 K05F1.10 P W All gene names: K05F1.10; 2G92; CE02805; WBGene00019411; WP:CE02805
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
K08B12.1 K08B12.1 P W All gene names: K08B12.1; 5G741; CE35337; WBGene00019520; WP:CE35337
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
K08E3.1 K08E3.1 P W All gene names: tyr-2; K08E3.1; 3O835; CE18864; NM_067435; WBGene00010661; WP:CE18864 WormBase description: tyrosinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Shen et al 2005 T1 hif-1 depend hypoxia
K09B3.1 K09B3.1 P W All gene names: K09B3.1; 4E561; CE31560; WBGene00019545; WP:CE31560
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
K09C8.1 K09C8.1 P W All gene names: nhx-7; pbo-4; K09C8.1; CE31034; NM_077429; WBGene00003943; WP:CE31034; XL575 WormBase description: pbo-4 encodes a sodium/proton exchanger (also known as nhx-7), with a potential Ca[2+]/calmodulin binding domain in its C-terminal cytosolic region that could mediate calcium signaling; PBO-4 is expressed in the basolateral membrane of posterior intestinal cells; PBO-4 is required for normal posterior body muscle contraction (pBoc) during the defecation cycle; PBO-4 is thought to prevent intracellular acidification by catalysing the electroneutral exchange of extracellular sodium for an intracellular proton; specifically, PBO-4 may enable intercellular signals from intestinal cells (by secreting protons which then might activate PBO-5 in adjacent muscle cells). WormBase CDS description: Na(+)/H(+) exchanger
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
K10B4.3 K10B4.3 P W All gene names: K10B4.3; 2A406; CE35995; WBGene00019615; WP:CE35995
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
K10H10.4 K10H10.4 P W All gene names: K10H10.4; 2O787; CE16254; WBGene00010760; WP:CE16254
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Shen et al 2005 T1 hif-1 depend hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated
K11D12.10 K11D12.10 P W All gene names: mlk-1; K11D12.10; 5F536; CE30383; CE30384; NM_171456; NM_171928; WBGene00003374; WP:CE30383; WP:CE30384
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
K11D12.4 K11D12.4 P W All gene names: cpt-4; K11D12.4; 5F502; CE12132; WBGene00019644; WP:CE12132 WormBase description: acetyltransferase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
K11G12.5 K11G12.5 P W All gene names: K11G12.5; CE02827; WBGene00019656; WP:CE02827; XH342 WormBase description: mitochondrial 2-oxoglutartae
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
M01E10.2 M01E10.2 P W All gene names: M01E10.2; 3D126; CE19534; WBGene00019708; WP:CE19534
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
M01F1.7 M01F1.7 P W All gene names: M01F1.7; 3E612; CE33673; WBGene00010813; WP:CE33673 WormBase description: M01F1.7 encodes a phosphatidylinositol transfer protein, with a C-terminal DDHD domain, that is orthologous to RETINAL DEGENERATION B (RDGB) in D. melanogaster, as well as other orthologs in mammals (NIR1-3); M01F1.7 is expressed in the egg membrane, the germline, the spermatheca and three pairs of head neurons; while M01F1.7 would be expected to mediate PIP(2) signalling in either neuronal function or cytokinesis, it has not yet had a published mutant phenotype, and has no obvious function in mass RNAi assays. WormBase CDS description: RETINAL DEGENERATION B PROTEIN (PROBABLE CALCIUM TRANSPORTER RDGB)
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S8 SAGE genes in the dauer exit, Wang et al 2003 S7 SAGE genes in the dataset
M03B6.3 M03B6.3 P W All gene names: M03B6.3; CE23873; WBGene00010835; WP:CE23873; XO480
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
M03F4.6 M03F4.6 P W All gene names: phi-61; M03F4.6; CE28621; WBGene00019759; WP:CE28621; XF584
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
M03F8.1 M03F8.1 P W All gene names: M03F8.1; 5G433; CE12372; WBGene00019761; WP:CE12372
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
M04C3.1 M04C3.1 P W All gene names: M04C3.1; 5T912; CE18078; CE31972; WBGene00010850; WP:CE18078; WP:CE31972
Member of lists (Publications lists):
Bishop et al 2004 T4 57 vhl-1 depend hif-1 indep, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B
M04C3.2 M04C3.2 P W All gene names: M04C3.2; 5T920; CE31973; WBGene00010851; WP:CE31973
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B
M04C3.3 M04C3.3 P W All gene names: M04C3.3; CE18080; WBGene00010852; WP:CE18080
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B
M04G7.3 M04G7.3 P W All gene names: M04G7.3; M04G7.3b.1; M04G7.3b.2; 4B214; CE17192; CE28624; WBGene00019774; WP:CE17192; WP:CE28624
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Shen et al 2005 T1 hif-1indepen hypoxia
M153.1 M153.1 P W All gene names: M153.1; CE03511; WBGene00010924; WP:CE03511; XM767 WormBase description: pyrroline-5-carboxylate reductase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Metabolism, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
M153.3 M153.3 P W All gene names: M153.3; CE03513; WBGene00010926; WP:CE03513; XM765
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
M28.8 M28.8 P W All gene names: M28.8; 2K923; CE02286; WBGene00010899; WP:CE02286
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
PDB1.1 PDB1.1 P W All gene names: PDB1.1; CE31209; CE39603; CE39604; NM_076878; WBGene00019803; WP:CE31209; WP:CE39603; WP:CE39604; XI176
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1 elongate lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
R01E6.2 R01E6.2 P W All gene names: R01E6.2; CE35593; WBGene00010968; WP:CE35593; XO180
Member of lists (Publications lists):
Bishop et al 2004 T4 57 vhl-1 depend hif-1 indep, Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
R01H2.5 R01H2.5 P W All gene names: R01H2.5; 3I150; CE00804; WBGene00019813; WP:CE00804
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
R02C2.4 R02C2.4 P W All gene names: nhr-204; R02C2.4; 5A732; CE32202; WBGene00019816; WP:CE32202 WormBase description: nuclear hormone receptor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
R02F11.1 R02F11.1 P W All gene names: R02F11.1; 5F281; CE12496; WBGene00019839; WP:CE12496
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
R02F11.3 R02F11.3 P W All gene names: R02F11.3; 5F280; CE36883; CE37658; WBGene00019841; WP:CE36883; WP:CE37658
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
R05D3.9 R05D3.9 P W All gene names: R05D3.9; 3J452; CE31049; WBGene00019882; WP:CE31049
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
R05G6.9 R05G6.9 P W All gene names: R05G6.9; 4I278; CE35359; WBGene00019901; WP:CE35359
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
R05H10.6 R05H10.6 P W All gene names: cdh-7; R05H10.6; 2P135; CE38092; NM_064674; WBGene00000399; WP:CE38092 WormBase description: cdh-7 encodes a protein that contains a cadherin domain. WormBase CDS description: Cadherin (3 domains)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
R06C1.4 R06C1.4 P W All gene names: R06C1.4; 1M523; CE18119; WBGene00011059; WP:CE18119 WormBase description: RNA recognition motif. (aka RRM, RBD, or RNP domain)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
R07B1.7 R07B1.7 P W All gene names: R07B1.7; CE01633; WBGene00011079; WP:CE01633; XK487
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B
R07B7.11 R07B7.11 P W All gene names: gana-1; R07B7.11; 5M569; CE06273; NM_073630; WBGene00011095; WP:CE06273 WormBase description: R07B7.11 is orthologous to the human gene ALPHA-GALACTOSIDASE B (GALB; OMIM:104170), which when mutated leads to Schindler disease, Kanzaki disease, or NAGA deficiency. WormBase CDS description: alpha-N-acetylgalactosaminidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Metabolism, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
R07C12.2 R07C12.2 P W All gene names: R07C12.2; 4E913; CE33679; WBGene00019932; WP:CE33679
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
R07E3.1 R07E3.1 P W All gene names: R07E3.1; R07E3.1a.1; R07E3.1a.2; R07E3.1b.1; R07E3.1b.2; CE02295; CE39608; WBGene00011102; WP:CE02295; WP:CE39608; XK958 WormBase description: cysteine proteinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
R07E3.6 R07E3.6 P W All gene names: R07E3.6; CE02300; WBGene00011107; WP:CE02300; XK939
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
R07E4.4 R07E4.4 P W All gene names: mig-23; R07E4.4; R07E4.4.1; R07E4.4.2; CE28748; NM_076593; WBGene00003254; WP:CE28748; XG566 WormBase description: guanosine-diphosphatase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
R07G3.6 R07G3.6 P W All gene names: R07G3.6; 2H894; CE02025; WBGene00019942; WP:CE02025
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
R08D7.7 R08D7.7 P W All gene names: R08D7.7; 3K85; CE01048; WBGene00011147; WP:CE01048 WormBase description: Carbohydrate kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
R09B5.8 R09B5.8 P W All gene names: cnc-3; R09B5.8; 5B927; CE12632; NM_071016; WBGene00000557; WP:CE12632
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, IVb male soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003 S4 genes pass two-wayANOVA P0
R09F10.1 R09F10.1 P W All gene names: R09F10.1; CE28755; WBGene00019986; WP:CE28755; XI943 WormBase description: peptidase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B
R09F10.4 R09F10.4 P W All gene names: inx-5; opu-5; R09F10.4; CE33811; NM_077002; WBGene00002127; WP:CE33811; XI916 WormBase description: inx-5 encodes a predicted member of the innexin family; expressed in the embryonic hypodermis, developing vulva, seam cells, and spermatheca. WormBase CDS description: unc-7-like protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Transporters, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
R107.8 R107.8 P W All gene names: lin-12; R107.8; 3K150; CE00274; NM_066606; WBGene00003001; WP:CE00274 WormBase description: The lin-12 gene encodes a member of the Notch/LIN-12/glp-1 transmembrane receptor family that affects cell fate specification events during development, notably including the anchor cell, secondary vulval precursor cells, and the embryonic ABplp lineage; its expression is dynamic, including Z1.ppp and Z4.aaa, ABplaa descendants, ABplpa descendants, and the intestinal primordium. WormBase CDS description: LIN-12 protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Murphy et al 2003 Fig2 Class2 shorten lifespan, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
R10E8.2 R10E8.2 P W All gene names: R10E8.2; 5S735; CE36449; WBGene00011208; WP:CE36449
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
R10E8.3 R10E8.3 P W All gene names: R10E8.3; 5S714; CE18911; WBGene00011209; WP:CE18911
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B
R11A5.7 R11A5.7 P W All gene names: R11A5.7; R11A5.7.1; R11A5.7.2; 1I448; CE32478; WBGene00011235; WP:CE32478 WormBase description: zinc carboxypeptidase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
R11D1.11 R11D1.11 P W All gene names: dhs-21; R11D1.11; 5N212; CE39954; NM_073781; WBGene00000984; WP:CE39954 WormBase description: dhs-21 encodes a member of the short-chain dehydrogenases/reductases family (SDR) expressed in the intestine, hypodermis, uterus, and spermatheca. WormBase CDS description: Mouse adipocyte P27 protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
R11E3.4 R11E3.4 P W All gene names: R11E3.4; 4F536; CE19546; WBGene00020006; WP:CE19546
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed oogenesis soma, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
R11G1.4 R11G1.4 P W All gene names: sax-1; R11G1.4; R11G1.4a.1; R11G1.4a.2; CE39615; CE39616; NM_076226; WBGene00004727; WP:CE39615; WP:CE39616; XE264 WormBase description: The sax-1 gene encodes a homolog of Ndr kinase that regulates neuronal cell shape and neurite initiation.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
R11G11.12 R11G11.12 P W All gene names: nhr-210; R11G11.12; 5A990; CE12762; WBGene00020015; WP:CE12762 WormBase description: zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, GO categories, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
R11G11.2 R11G11.2 P W All gene names: nhr-58; R11G11.2; 5B11; CE12742; CE33298; NM_070835; WBGene00003648; WP:CE12742; WP:CE33298 WormBase description: zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
R11G11.6 R11G11.6 P W All gene names: R11G11.6; 5A981; CE12750; WBGene00020014; WP:CE12750
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
R12E2.9 R12E2.9 P W All gene names: inx-15; opu-15; R12E2.9; 1E728; CE18141; NM_058912; WBGene00002137; WP:CE18141
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
R13A1.8 R13A1.8 P W All gene names: R13A1.8; 4H982; CE04843; WBGene00020045; WP:CE04843
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster B, Reinke et al 2004, IVb male soma enriched genes, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
R148.5 R148.5 P W All gene names: R148.5; 3E259; CE31583; CE32711; WBGene00020104; WP:CE31583; WP:CE32711
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
R186.6 R186.6 P W All gene names: R186.6; 5N438; CE20030; WBGene00011307; WP:CE20030 WormBase description: Rhodanese-like domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
R74.2 R74.2 P W All gene names: R74.2; 3F279; CE23931; WBGene00011278; WP:CE23931
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
T01B7.7 T01B7.7 P W All gene names: rol-6; T01B7.7; 2J23; CE03591; NM_063457; WBGene00004397; WP:CE03591 WormBase description: The rol-6 gene encodes a cuticle collagen related to human collagen alpha 1 (III) chain precursor (OMIM:120180), and is required for normal cuticular morphology; ROL-6 interacts with SQT-1, a closely related cuticle collagen, and is expressed at all stages from L2 to adult with transcripts detected at each of the molts preceding these stages. WormBase CDS description: cuticle collagen ROL-6
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic induced Collag, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
T01B7.8 T01B7.8 P W All gene names: T01B7.8; 2J24; CE03592; WBGene00011313; WP:CE03592
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
T01C8.5 T01C8.5 P W All gene names: T01C8.5; CE07462; WBGene00020146; WP:CE07462; XR406 WormBase description: aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
T01G6.9 T01G6.9 P W All gene names: str-256; T01G6.9; 5A976; CE25978; NM_070822; WBGene00006282; WP:CE25978 WormBase description: 7TM chemoreceptor, str family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
T02D1.6 T02D1.6 P W All gene names: T02D1.6; 4S352; CE30684; WBGene00011372; WP:CE30684 WormBase description: 7 transmembrane receptor (rhodopsin family)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster B, Reinke et al 2004, IVb male soma enriched genes, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
T02E9.2 T02E9.2 P W All gene names: grl-7; T02E9.2; T02E9.2a.1; T02E9.2a.2; 5L826; CE13064; CE38539; NM_073481; WBGene00001716; WP:CE13064; WP:CE38539
Member of lists (Publications lists):
Bishop et al 2004 T4 57 vhl-1 depend hif-1 indep, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
T03D8.6 T03D8.6 P W All gene names: T03D8.6; 5V288; CE37271; WBGene00011393; WP:CE37271 WormBase description: Gamma-glutamyltranspeptidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
T03F7.7 T03F7.7 P W All gene names: T03F7.7; 5L793; CE20032; CE32484; WBGene00011404; WP:CE20032; WP:CE32484 WormBase description: Candida SEC14 cytosolic factor like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, herm soma enriched genes, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated
T04B2.3 T04B2.3 P W All gene names: T04B2.3; 4K813; CE23944; WBGene00011422; WP:CE23944
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2 sir-2.1 regulated, Zhang et al 2002, T1 mec-3 dependent genes
T04H1.6 T04H1.6 P W All gene names: egf-5; lrx-1; T04H1.6; 5M735; CE38413; NM_073671; WBGene00003075; WP:CE38413 WormBase description: lrx-1 encodes a protein that contains four class A low-density lipoprotein receptor domains. WormBase CDS description: low-density lipoprotein receptor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 daf-16 Resveratrol
T05B11.1 T05B11.1 P W All gene names: T05B11.1; 5I231; CE07464; WBGene00020245; WP:CE07464 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, list of genes in cluster B
T05B4.9 T05B4.9 P W All gene names: T05B4.9; 5E586; CE13209; WBGene00020240; WP:CE13209
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B
T05C1.3 T05C1.3 P W All gene names: T05C1.3; 2E776; CE02861; WBGene00020250; WP:CE02861
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
T05C12.10 T05C12.10 P W All gene names: qua-1; T05C12.10; 2I493; CE34989; M110; NM_063324; WBGene00004264; WP:CE34989 WormBase description: hedgehog-like protein
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
T05D4.4 T05D4.4 P W All gene names: T05D4.4; 3O667; CE34087; WBGene00011477; WP:CE34087
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
T05E7.1 T05E7.1 P W All gene names: T05E7.1; 1G781; CE13231; WBGen