Gene name Source Gene ID Annotation Date Added by
AC3.5 AC3.5 P W All gene names: AC3.5; 5K873; CE36372; WBGene00007071;
WP:CE36372
WormBase description: glutamyl aminopeptidase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S6 removed genes of
contamination
AC3.7 AC3.7 P W All gene names: dod-15; ugt-1; AC3.7; 5K877; CE05137;
NM_073270; WBGene00007072; WP:CE05137
WormBase description: UDP-glucuronosyltransferase
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, Murphy et al 2003 Fig2 Class1
elongate lifespan, ReichertK et al 2005 T1 xenobiotic
induced UDP-gl, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, GO categories, Reinke et al
2004, list of genes in cluster B, ViswanathanM et al
2005 S2 sir-2.1 regulated
AC8.3 AC8.3 P W All gene names: AC8.3; AC8.F; CE37737; WBGene00007075;
WP:CE37737; XA844
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
B0198.3 B0198.3 P W All gene names: B0198.3; CE37308; WBGene00007116;
WP:CE37308; XM662
WormBase description: protein kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
B0205.4 B0205.4 P W All gene names: B0205.4; 1L320; CE39201;
WBGene00015019; WP:CE39201
WormBase description: The B0205.4 gene encodes a
homolog of the human gene FUT1, which when mutated
leads to leukocyte adhesion deficiency, type II
(OMIM:266265).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
B0205.6 B0205.6 P W All gene names: B0205.6; 1L315; CE30405;
WBGene00015021; WP:CE30405
WormBase description: aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
B0218.6 B0218.6 P W All gene names: clec-51; B0218.6; 4I928; CE06689;
WBGene00015050; WP:CE06689
WormBase description: 7TM chemoreceptor, clec family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
B0222.6 B0222.6 P W All gene names: col-144; B0222.6; 5J640; CE30585;
NM_072973; WBGene00000717; WP:CE30585
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic
induced Collag, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003
S4 genes pass two-wayANOVA P0
B0222.7 B0222.7 P W All gene names: col-145; B0222.7; 5J642; CE06698;
NM_072974; WBGene00000718; WP:CE06698
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
B0222.8 B0222.8 P W All gene names: col-10; B0222.8; 5J644; CE06699;
NM_072975; WBGene00000599; WP:CE06699
WormBase description: col-10 encodes a collagen
protein; expressed exclusively in hypodermal cells
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic
induced Collag, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003
S4 genes pass two-wayANOVA P0
B0280.2 B0280.2 P W All gene names: B0280.2; 3I215; CE37473;
WBGene00015100; WP:CE37473
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
B0286.3 B0286.3 P W All gene names: B0286.3; 2E660; CE03863;
WBGene00015116; WP:CE03863
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: saicar synthetase/air
carboxlyase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Murphy et al 2003 Fig2 Class1
elongate lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S6 removed genes of
contamination
B0304.3 B0304.3 P W All gene names: cyp-23A1; B0304.3; 2E805; CE27050;
NM_062396; WBGene00015135; WP:CE27050
WormBase description: The B0304.3 gene encodes a
homolog of the human gene CYP7B1, which when mutated
leads to giant cell hepatitis (OMIM:231100).
WormBase CDS description: Cytochrome P450
Member of lists (Publications lists):
Custodia et al 2001 T2 Cytochrome
P450, Menzel et al 2001 T3 CYP genes, Reinke et al
2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster B, Wang et al 2003 S5
genes common to feeding ANOVA, Wang et al 2003 S3
genes pass one-way ANOVA
B0344.2 B0344.2 P W All gene names: wrt-9; B0344.2; CE33963; NM_075897;
WBGene00006955; WP:CE33963; XC209
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
B0348.5 B0348.5 P W All gene names: B0348.5; Y108G3B.A; 5A485; CE17330;
WBGene00015153; WP:CE17330
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
B0379.1 B0379.1 P W All gene names: B0379.1; 1K653; CE20452;
WBGene00007155; WP:CE20452
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
B0393.5 B0393.5 P W All gene names: B0393.5; 3F865; CE00858;
WBGene00007170; WP:CE00858
WormBase description: EGF-like aspartic acid and
asparagine hydroxylation sites
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
B0395.2 B0395.2 P W All gene names: B0395.2; CE02943; WBGene00007174;
WP:CE02943; XQ647
WormBase description: Sterol O-acyltransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Metabolism,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
B0414.4 B0414.4 P W All gene names: B0414.4; WBGene00043087
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
B0416.1 B0416.1 P W All gene names: B0416.1; CE19663; WBGene00015177;
WP:CE19663; XJ927
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
B0491.2 B0491.2 P W All gene names: rol-5; sqt-1; B0491.2; B0491.2.1;
B0491.2.2; 2L626; CE02104; NM_064020; Rol;
WBGene00005016; WP:CE02104
WormBase description: sqt-1 encodes a cuticle collagen;
during larval and adult development, sqt-1 activity is
required, likely redundantly, for normal cuticle, and
hence organismal, morphology; sqt-1 mRNA abundance
oscillates during larval development, peaking at one
point during each larval stage and peaking again in
adults; sqt-1 transcripts are also detected in animals
at the L1-L2d molt; in the temporally distinct waves of
collagen gene expression that occur during larval
development, sqt-1 mRNA appears to be synthesized
during the second, or intermediate, stage, just very
slightly earlier than sqt-3/col-1 and dpy-13; SQT-1
protein is detected in cuticle extracts from L2, L3,
and L4 larvae, and from adults, but is not detected in
extracts from L1 or dauer larvae; sqt-1 interacts
genetically with a number of genes also required for
normal cuticle and organismal morphology, e.g., rol-6
and lon-3, which also encode cuticular collagens.
WormBase CDS description: cuticle collagen SQT-1
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic
induced Collag, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
B0511.5 B0511.5 P W All gene names: B0511.5; 1L205; CE17344;
WBGene00015231; WP:CE17344
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
B0513.5 B0513.5 P W All gene names: B0513.5; 4O634; CE37309;
WBGene00007197; WP:CE37309
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
BE10.2 BE10.2 P W All gene names: BE10.2; 3N884; CE30592; WBGene00007210;
WP:CE30592
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C01B10.10 C01B10.10 P W All gene names: C01B10.10; 4H390; CE37180;
WBGene00015284; WP:CE37180
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B
C01B10.4 C01B10.4 P W All gene names: C01B10.4; 4H396; CE34641;
WBGene00015279; WP:CE34641
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C01B12.1 C01B12.1 P W All gene names: sqt-2; C01B12.1; 2A315; CE07789;
NM_061234; WBGene00005017; WP:CE07789
WormBase description: Uncloned locus that affects alae
formation and body morphology such that mutants exhibit
a slightly dumpy phenotype and the bodies of mutants
are helically twisted.
WormBase CDS description: cuticular collagen
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C01B12.7 C01B12.7 P W All gene names: C01B12.7; 2A316; CE07795;
WBGene00015290; WP:CE07795
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C01B7.4 C01B7.4 P W All gene names: tag-117; C01B7.4; 5J272; CE06728;
WBGene00006467; WP:CE06728
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: guanylate kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b signaling
C01F1.3 C01F1.3 P W All gene names: phi-41; C01F1.3; C01F1.3a.1;
C01F1.3a.2; 2E587; CE06744; CE39553; WBGene00015298;
WP:CE06744; WP:CE39553
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Metabolism,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C01F1.5 C01F1.5 P W All gene names: C01F1.5; 2E570; CE06746;
WBGene00015300; WP:CE06746
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 Resveratrol
regulate WT
C02D5.1 C02D5.1 P W All gene names: C02D5.1; 3J649; CE24778;
WBGene00015335; WP:CE24778
WormBase description: Isovaleryl-CoA dehydrogenase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C02D5.2 C02D5.2 P W All gene names: C02D5.2; 3J647; CE00034; CE39554;
WBGene00015336; WP:CE00034; WP:CE39554
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C02F4.2 C02F4.2 P W All gene names: cna-1; pph-3; pph2B-A; tax-6; C02F4.2;
4L258; CE07853; CE33593; PP2B; WBGene00006527;
WP:CE07853; WP:CE33593
WormBase description: tax-6 encodes an ortholog of
calcineurin A that is required for inhibition and
adaptation of several sensory neurons and for the
normal regulation of egg-laying by serotonin; TAX-6
stimulates transcription of rcn-1, and binds RCN-1
protein if free Ca[2+] is present; in general,
calcineurin positively regulates calcium-dependent
signaling.
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S7 SAGE genes in the dataset, Wang et al 2003
S8 SAGE genes in the dauer exit
C04C11.2 C04C11.2 P W All gene names: C04C11.2; C04C11.2.1; C04C11.2.2;
CE05210; WBGene00007296; WP:CE05210; XO655
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C04E12.12 C04E12.12 P W All gene names: C04E12.12; 5D864; CE39556;
WBGene00015441; WP:CE39556
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C04E6.12 C04E6.12 P W All gene names: C04E6.12; 5G400; CE07917;
WBGene00015426; WP:CE07917
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C04F1.1 C04F1.1 P W All gene names: C04F1.1; 1G304; CE17364;
WBGene00015442; WP:CE17364
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C05A9.1 C05A9.1 P W All gene names: pgp-5; C05A9.1; CE05221; NM_077409;
WBGene00003999; WP:CE05221; XL474
WormBase description: pgp-5 encodes a transmembrane
protein that is a member of the P-glycoprotein subclass
of the ATP-binding cassette (ABC) transporter
superfamily; by homology, PGP-5 is predicted to
function as an ATP-dependent efflux pump that protects
C. elegans by exporting exogenous toxins; however, as
loss of pgp-5 activity via large-scale RNAi screens
does not result in any obvious abnormalities, the
precise role of PGP-5 in C. elegans development and/or
behavior is not yet known.
WormBase CDS description: p-glycoprotein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C05C8.3 C05C8.3 P W All gene names: dao-1; fkb-3; C05C8.3; 5H707; CE07921;
NM_072434; WBGene00001428; WP:CE07921
WormBase description: fkb-3 encodes a peptidylprolyl
cis/trans isomerase homologous to mammalian FK506
immunosuppressant-binding protein 9; FKB-3 expression
is positively regulated by signaling through the DAF-2
insulin receptor-like pathway and the activity of the
DAF-16 fork-head transcription factor suggesting that
FKB-3 could play a role in metabolism and longevity;
however, as loss of FKB-3 function via RNA-mediated
interference (RNAi) does not result in any
abnormalities, the precise role of FKB-3 in C. elegans
development and/or behavior is not yet known; FKB-3
contains a predicted endoplasmic reticulum (ER)
retention sequence and is thus proposed to localize to
the ER.
WormBase CDS description: FKBP-binding protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C05C8.7 C05C8.7 P W All gene names: phi-49; C05C8.7; C05C8.7.1; C05C8.7.2;
C05C8.7.3; C05C8.7.4; 5H724; CE07925; WBGene00015464;
WP:CE07925
WormBase description: mannose-6-phosphate isomerase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, GO categories, Reinke et al
2004, list of genes in cluster B, Romagnolo et al 2002
Fig3b Metabolism, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003
S4 genes pass two-wayANOVA P0
C05C9.1 C05C9.1 P W All gene names: C05C9.1; CE33968; WBGene00007325;
WP:CE33968; XL779
WormBase description: LBP / BPI / CETP family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C05D11.6 C05D11.6 P W All gene names: nas-4; C05D11.6; 3H498; CE37080;
NM_066004; WBGene00003523; WP:CE37080
WormBase description: nas-4 encodes a predicted
extracellular matrix metalloprotease of the M12A
(astacin) family that contains an N-terminal signal
sequence and a catalytic domain, but no recognizable
regulatory domains in the C-terminus; as loss of nas-4
activity via RNAi results in no obvious abnormalities,
the precise role of NAS-4 in C. elegans development
and/or behavior is not yet known; however, an NAS-4
translational reporter is expressed in the pharynx and
intestine in larvae and adults, suggesting a role for
NAS-4 in digestion; NAS-4 is specifically detected
within cells of the pharyngeal procorpus, metacorpus,
isthmus, and terminal bulb, with extracellular
expression detected in the lumen of the terminal bulb
and in the gut.
WormBase CDS description: zinc metalloprotease
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C06B8.8 C06B8.8 P W All gene names: rpl-38; C06B8.8; C06B8.8.1; C06B8.8.2;
5P991; CE20485; NM_074459; WBGene00004452; WP:CE20485
WormBase description: rpl-38 encodes a large ribosomal
subunit L38 protein.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Romagnolo et al 2002 Fig3b Protein Synthesis
C06E2.1 C06E2.1 P W All gene names: C06E2.1; CE03944; WBGene00015527;
WP:CE03944; XJ490
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C06E7.4 C06E7.4 P W All gene names: C06E7.4; 4G616; CE29026;
WBGene00015541; WP:CE29026
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C06G1.1 C06G1.1 P W All gene names: C06G1.1; CE27054; WBGene00015545;
WP:CE27054; XR251
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C06G1.5 C06G1.5 P W All gene names: C06G1.5; CE37187; WBGene00015548;
WP:CE37187; XR254
WormBase description: protein phosphatase PP2A
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
C06H5.1 C06H5.1 P W All gene names: C06H5.1; 5S376; CE27668;
WBGene00007392; WP:CE27668
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; this gene's
encoded protein also contains an FTH/DUF38 motif, which
may also mediate protein-protein interaction.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C07B5.2 C07B5.2 P W All gene names: C07B5.2; CE00892; WBGene00007407;
WP:CE00892; XK134
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C07E3.10 C07E3.10 P W All gene names: C07E3.10; 2K637; CE15607;
WBGene00007420; WP:CE15607
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C07E3.3 C07E3.3 P W All gene names: C07E3.3; 2K644; CE32305;
WBGene00007414; WP:CE32305
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C07H6.3 C07H6.3 P W All gene names: C07H6.3; C07H6.3.1; C07H6.3.2; 3I603;
CE29074; WBGene00015580; WP:CE29074
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C09E8.3 C09E8.3 P W All gene names: mlt-10; C09E8.3; 2A841; CE19349;
WBGene00015646; WP:CE19349
Member of lists (Publications lists):
Bishop et al 2004 T1 Upregulated in
vhl-1 vs WT, Lund et al 2002 Fig1 aging-regulated
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C09H10.2 C09H10.2 P W All gene names: rpl-41; C09H10.2; C09H10.2.1;
C09H10.2.2; C09H10.2.3; 2L388; CE02131; NM_063974;
WBGene00004454; WP:CE02131
WormBase description: rpl-41 encodes a large ribosomal
subunit L41 protein; by homology, RPL-41 is predicted
to function in protein biosynthesis.
WormBase CDS description: 60S ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Romagnolo et al 2002 Fig3b Protein Synthesis
C09H5.2 C09H5.2 P W All gene names: C09H5.2; 5I559; CE24797; CE32578;
WBGene00015660; WP:CE24797; WP:CE32578
WormBase description: ATPase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C10F3.6 C10F3.6 P W All gene names: fut-8; C10F3.6; 5G468; CE32580;
NM_072154; WBGene00001508; WP:CE32580; fut8
WormBase description: fut-8 encodes a core alpha
1,6-fucosyltransferase; characterization of a
recombinant form of the protein that contains the
catalytic region of FUT-8 reveals a sustrate
requirement for unsubstituted nonreducing terminal
GlcNAc residues.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Romagnolo et al 2002 Fig3b Metabolism
C11E4.6 C11E4.6 P W All gene names: C11E4.6; CE31411; WBGene00007520;
WP:CE31411; XK235
WormBase description: ankyrin repeats
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C11H1.3 C11H1.3 P W All gene names: C11H1.3; CE05262; WBGene00007529;
WP:CE05262; XO930
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
C13C12.2 C13C12.2 P W All gene names: C13C12.2; 5N4; CE08133; WBGene00007552;
WP:CE08133
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C14A4.9 C14A4.9 P W All gene names: C14A4.9; C14A4.9.1; C14A4.9.2; 2K891;
CE02150; WBGene00007560; WP:CE02150
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C14B9.1 C14B9.1 P W All gene names: hsp-12.2; C14B9.1; C14B9.1.1;
C14B9.1.2; C14B9.1.3; 3J229; CE00072; NM_066375;
WBGene00002011; WP:CE00072
WormBase description: hsp-12.2 is orthologous to the
human gene CRYSTALLIN, ALPHA B (CRYAB; OMIM:123590),
which when mutated leads to disease.
WormBase CDS description: Alpha-B-crystallin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C14F5.4 C14F5.4 P W All gene names: C14F5.4; CE30370; WBGene00015777;
WP:CE30370; XI576
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C15C6.1 C15C6.1 P W All gene names: C15C6.1; 1M795; CE18501;
WBGene00007600; WP:CE18501
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C15C7.1 C15C7.1 P W All gene names: C15C7.1; C15C7.1.1; C15C7.1.2; CE30865;
WBGene00015789; WP:CE30865; XD783
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C15C8.2 C15C8.2 P W All gene names: cky-1; C15C8.2; 5N221; CE30427;
NM_073783; WBGene00000521; WP:CE30427
WormBase description: cky-1 encodes a member of the
basic-helix-loop-helix-PAS (bHLH-PAS) protein family;
it is likely that CKY-1 together with AHA-1, another
bHLH-PAS protein, has a role in pharyngeal function;
CKY-1 is expressed in most non-neuronal pharyngeal
cells.
WormBase CDS description: Human ARNT-interacting
protein like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C15F1.2 C15F1.2 P W All gene names: C15F1.2; 2H277; CE23545;
WBGene00015795; WP:CE23545
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
C15H9.10 C15H9.10 P W All gene names: C15H9.10; CE06836; WBGene00015804;
WP:CE06836; XG730
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C16B8.4 C16B8.4 P W All gene names: C16B8.4; CE30248; WBGene00015824;
WP:CE30248; XE590
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C16C4.13 C16C4.13 P W All gene names: math-8; C16C4.13; 2C152; CE08209;
WBGene00015837; WP:CE08209
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C16C8.2 C16C8.2 P W All gene names: C16C8.2; 2D722; CE23553;
WBGene00015841; WP:CE23553
WormBase description: peroxidase precursor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C16D9.2 C16D9.2 P W All gene names: let-333; rol-3; C16D9.2; 5I710;
CE32798; CE32799; CE32800; NM_072721; NM_182326;
NM_182327; WBGene00004395; WP:CE32798; WP:CE32799;
WP:CE32800
WormBase description: rol-3 was identified in screens
for recessive mutations that affect body morphology;
strong loss-of-function mutations in rol-3 result in
early-to-mid larval lethality, while weaker mutations
result in animals that are left-handed rollers at the
adult stage only; lethal rol-3 mutations are suppressed
by mutations in srl-1 and srl-2.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 Resveratrol
regulate WT
C17B7.11 C17B7.11 P W All gene names: fbxa-65; C17B7.11; 5D824; CE16859;
WBGene00015885; WP:CE16859
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins; this gene's
encoded protein also contains an FTH/DUF38 motif, which
may also mediate protein-protein interaction.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C17G1.6 C17G1.6 P W All gene names: nas-37; C17G1.6; C17G1.6b.1;
C17G1.6b.2; CE31417; CE38034; WBGene00003553;
WP:CE31417; WP:CE38034; XK564
WormBase description: nas-37 encodes an extracellular
matrix metalloprotease of the M12A (astacin) family
that, in addition to its catalytic domain, contains an
N-terminal secretion signal and EGF-like, CUB, and
thrombospondin-1 domains in the C-terminal regulatory,
or predicted protein-protein interaction, region;
NAS-37 activity is required for efficient or full
completion of the four larval molts in which older
cuticle is shed and replaced by the newer,
stage-specific cuticle; NAS-37 is able to induce the
formation of an anterior contractile ring in cuticle
from a parasitic nematode, suggesting that anterior
cuticle digestion may be a conserved process in
nematode ecdysis; in addition, NAS-37 may also play a
minor role in normal cuticular collagen synthesis
and/or processing; a NAS-37 translational reporter is
expressed in the anterior hypodermis Hyp5, the
excretory duct cell, and in pharyngeal, rectal, amphid,
and vulval tissues; expression in Hyp5 can be see up to
four hours prior to ecdysis; nas-37 promoter fusions
additionally reveal expression in all hypodermal cells,
although the functional significance of this more
widespread expression is not yet known.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Proteases,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 Resveratrol regulate WT
C18B2.3 C18B2.3 P W All gene names: C18B2.3; CE27077; WBGene00015954;
WP:CE27077; XE221
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C18C4.5 C18C4.5 P W All gene names: C18C4.5; 5G32; CE30729; CE35246;
WBGene00015966; WP:CE30729; WP:CE35246
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C18D11.1 C18D11.1 P W All gene names: C18D11.1; 3M907; CE18512;
WBGene00007679; WP:CE18512
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C18E9.9 C18E9.9 P W All gene names: C18E9.9; 2J278; CE05301;
WBGene00007689; WP:CE05301
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C23F12.1 C23F12.1 P W All gene names: C23F12.1; CE32133; CE32134;
WBGene00016006; WP:CE32133; WP:CE32134; XK45
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C24A3.6 C24A3.6 P W All gene names: mah-2; twk-18; unc-110; C24A3.5;
C24A3.6; C24A3.6.1; C24A3.6.2; CE24811; WBGene00006672;
WP:CE24811; XJ611
WormBase description: twk-18 encodes one of 44 C.
elegans TWK (two-P domain K+) potassium channel
subunits that contain two pore-forming domains and four
transmembrane domains; TWK-18 was originally defined by
gain-of-function mutations that result in embryonic
lethality at the two-fold stage, locomotion defects,
longer than normal body length, abnormal egg-laying,
and temperature-sensitive paralysis; as loss of TWK-18
function via reversion or RNA-mediated interference
does not result in any abnormalities, TWK-18 likely
functions redundantly with other TWK channels; TWK-18
can function as an outwardly rectifying K+ channel, and
is activated by temperature increases, thus making it a
temperature-gated channel; TWK-18 is expressed in body
wall muscle.
WormBase CDS description: potassium channel protein
Member of lists (Publications lists):
Jiang et al 2001 Fig1 male-enriched
neuronal, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C24B5.3 C24B5.3 P W All gene names: ptr-1; C24B5.3; 5J656; CE06861;
NM_072979; WBGene00004216; WP:CE06861
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
C25F9.4 C25F9.4 P W All gene names: C25F9.4; 5T886; CE33975;
WBGene00007724; WP:CE33975
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al
2005 S2 daf-16 Resveratrol
C26B9.3 C26B9.3 P W All gene names: C26B9.3; CE29187; WBGene00016133;
WP:CE29187; XF957
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C26D10.5 C26D10.5 P W All gene names: eff-1; elf-1; C26D10.5; 2I639; CE03028;
CE30881; CE31159; CE32594; WBGene00001159; WP:CE03028;
WP:CE30881; WP:CE31159; WP:CE32594
WormBase description: The eff-1 gene encodes a novel,
type I transmembrane glycoprotein that is required for
cell fusion during development; eff-1(hy21) mutants are
viable, but have severe body morphology defects
associated with cell fusion failure.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C26E1.3 C26E1.3 P W All gene names: C26E1.3; 5N787; CE31885;
WBGene00007749; WP:CE31885
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown
C26F1.1 C26F1.1 P W All gene names: C26F1.1; 5I267; CE32807; CE35249;
WBGene00016146; WP:CE32807; WP:CE35249
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
C27A2.4 C27A2.4 P W All gene names: C27A2.4; 2F348; CE39326;
WBGene00016152; WP:CE39326
WormBase description: acid phosphotase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b others, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C27H5.1 C27H5.1 P W All gene names: pdl-1; C27H5.1; 2H473; CE01175;
NM_063089; WBGene00003966; WP:CE01175
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
C27H6.1 C27H6.1 P W All gene names: apt-10; C27H6.1; 5K448; CE08425;
NM_073165; WBGene00000167; WP:CE08425
WormBase description: apt-10 encodes the C. elegans
ortholog of the mammalian Stonins and Drosophila Stoned
B, membrane-associated proteins that contain three
distinct domains: a proline-rich domain, a stonin
homology domain, and a domain paralogous to the
mu-adaptin subunits of adaptor protein complexes 1-3;
by homology, APT-10 is predicted to regulate the
activity of the heteromeric AP-1 and AP-2 clathrin
adaptor protein complexes, and thus to play a role in
intracellular protein trafficking and endocytosis; in
vivo, apt-10 is required for the secretion of
EGL-17/FGF, required for sex myoblast migration, from
the vulval precursor cell P6.p; loss of apt-10 activity
via large-scale RNAi screens, however, does not result
in any obvious abnormalities.
WormBase CDS description: Adaptor complexes medium
subunit family
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C28G1.1 C28G1.1 P W All gene names: ubc-23; C28G1.1; CE37613; NM_077097;
WBGene00006718; WP:CE37613; XJ467
WormBase description: ubc-23 encodes a predicted
conjugating enzyme (UBCs/E2s) of the
ubiquitin-conjugation system; expressed in larvae and
adults in cells around the pharynx and in intestinal
cells.
WormBase CDS description: ubiquitin-conjugating enzyme
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C28G1.3 C28G1.3 P W All gene names: C28G1.3; C28G1.3.1; C28G1.3.2; CE37614;
WBGene00016188; WP:CE37614; XJ452
WormBase description: GTP-binding protein and M protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C28H8.5 C28H8.5 P W All gene names: C28H8.5; 3G973; CE01827; CE39681;
WBGene00016196; WP:CE01827; WP:CE39681
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C29E4.1 C29E4.1 P W All gene names: col-90; C29E4.1; 3J39; CE00083;
NM_066328; WBGene00000665; WP:CE00083
WormBase description: Cuticle collagen
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt herm enriched
gen, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0, Wang et al 2003 S4
LateList
C29E6.1 C29E6.1 P W All gene names: let-653; C29E6.1; C29E6.1b.1;
C29E6.1b.2; 4M655; CE05332; CE37323; WBGene00002827;
WP:CE05332; WP:CE37323
WormBase description: let-653 encodes a mucin-like
protein similar to the highly glycosylated mucins
secreted by the apical surface of epithelia and
believed to provide a protective barrier to exposed
cellular surfaces; LET-653 is required for viability,
locomotion, and for maintaining the tubular epithelial
structure of the excretory cell canals.
WormBase CDS description: LET-653 mucin like protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 Resveratrol
regulate WT
C29E6.2 C29E6.2 P W All gene names: trpa-1; C29E6.2; 4M639; CE37324;
WBGene00007801; WP:CE37324
WormBase description: ankyrin repeats
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
C29F3.2 C29F3.2 P W All gene names: wrt-8; C29F3.2; 5P822; CE29200;
NM_074404; WBGene00006954; WP:CE29200
WormBase description: Hint module
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C29F3.5 C29F3.5 P W All gene names: C29F3.5; 5P828; CE08439;
WBGene00007806; WP:CE08439
WormBase description: Lectin C-type domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C30B5.6 C30B5.6 P W All gene names: C30B5.6; 2G508; CE32155;
WBGene00016247; WP:CE32155
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S7 SAGE genes in the dataset, Wang et al 2003
S8 SAGE genes in the dauer exit
C30F12.5 C30F12.5 P W All gene names: C30F12.5; 1H568; CE16885;
WBGene00016264; WP:CE16885
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S4 Climbing, Wang et al 2003 S7 SAGE
genes in the dataset, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S8 SAGE genes in the
dauer exit, Wang et al 2003 S4 genes pass two-wayANOVA
P0
C30F12.6 C30F12.6 P W All gene names: C30F12.6; 1H569; CE16886;
WBGene00016265; WP:CE16886
WormBase description: seven trans-membrane receptor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C30F2.3 C30F2.3 P W All gene names: C30F2.3; CE35416; WBGene00007817;
WP:CE35416; XQ699
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Early genes, Wang et al 2003
S4 genes pass two-wayANOVA P0
C31A11.1 C31A11.1 P W All gene names: C31A11.1; 5Q771; CE15653;
WBGene00007829; WP:CE15653
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C31H2.2 C31H2.2 P W All gene names: dpy-8; C31H2.2; CE04130; NM_076472;
WBGene00001070; WP:CE04130; XF768
WormBase description: dpy-8 encodes a collagen with a
nematode-specific N-terminal domain that is required
for normal body morphology and (perhaps) for a normal
embryonic cell division rate; dpy-8 interacts
genetically with emb-5 and glp-1.
WormBase CDS description: collagen alpha (weak)
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt herm enriched
gen, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0, Wang et al 2003 S4
LateList
C32E12.3 C32E12.3 P W All gene names: osr-1; C32E12.3; 1F768; CE30495;
NM_059144; WBGene00016329; WP:CE30495
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C33A12.6 C33A12.6 P W All gene names: ugt-21; C33A12.6; 4K263; CE05352;
WBGene00007885; WP:CE05352
WormBase description: UDP-glucuronysltransferase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, GO categories, Reinke
et al 2004, herm soma enriched genes, Reinke et al
2004, list of genes in cluster B, ViswanathanM et al
2005 S2 sir-2.1 regulated
C33D3.3 C33D3.3 P W All gene names: C33D3.3; CE02154; WBGene00007894;
WP:CE02154; XL103
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C33D9.3 C33D9.3 P W All gene names: C33D9.3; 4J556; CE33758; CE33759;
WBGene00007898; WP:CE33758; WP:CE33759
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Dauer Enriched, Wang et al 2003 S8 SAGE genes in
the dauer exit, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C33F10.7 C33F10.7 P W All gene names: C33F10.7; C33F10.7b.1; C33F10.7b.2;
2F108; CE04140; CE37751; WBGene00016355; WP:CE04140;
WP:CE37751
WormBase description: esterase and beta-lactamase
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C34C12.6 C34C12.6 P W All gene names: C34C12.6; 3E573; CE01514;
WBGene00007925; WP:CE01514
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C34C12.7 C34C12.7 P W All gene names: C34C12.7; 3E574; CE01515;
WBGene00007926; WP:CE01515
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C34C6.6 C34C6.6 P W All gene names: PEX-5; prx-5; C34C6.6; 2I995; CE03054;
CE36377; WBGene00004194; WP:CE03054; WP:CE36377
WormBase description: prx-5 encodes an ortholog of the
human receptor for type I peroxisomal targeting signal
protein, PXR1 (or PEX5; OMIM:600414), which when
mutated leads to neonatal adrenoleukodystrophy or
Zellweger syndrome; PXR1 protein is a component of the
peroxisomal import machinery known to exist in
organisms like yeast, plants and mammals.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
C34E11.3 C34E11.3 P W All gene names: tag-241; C34E11.3; CE08573;
WBGene00007936; WBGene00044079; WP:CE08573; XM453
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C34E7.4 C34E7.4 P W All gene names: C34E7.4; CE03061; WBGene00007934;
WP:CE03061; XN552
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C34F6.10 C34F6.10 P W All gene names: C34F6.10; CE15679; WBGene00007944;
WP:CE15679; XL848
WormBase description: Fibronectin type III domain (4
domains)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C34F6.8 C34F6.8 P W All gene names: C34F6.8; C34F6.8.1; C34F6.8.2;
C34F6.8.3; CE15677; WBGene00007942; WP:CE15677; XL835
WormBase description: Isocitrate and isopropylmalate
dehydrogenases
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig5 conserved w/ yeast,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C34H4.4 C34H4.4 P W All gene names: col-107; C34H4.4; 4C313; CE20539;
CE27821; NM_067693; NM_182305; WBGene00000681;
WP:CE20539; WP:CE27821
WormBase description: cuticular collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C37A5.9 C37A5.9 P W All gene names: pry-1; C37A5.9; 1O766; CE30125;
NM_061073; WBGene00004202; WP:CE30125
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C37F5.1 C37F5.1 P W All gene names: lin-1; C37F5.1; C37F5.1.1; C37F5.1.2;
4D42; CE31440; WBGene00002990; WP:CE31440
WormBase description: lin-1 encodes an
Ets-domain-containing transcription factor that is a
member of the ETS gene family that includes human ELK1,
3, and 4 (OMIM:600247); LIN-1 functions as a general
effector of MAP kinase-mediated signaling; when MAP
kinase is inactive, LIN-1 forms a complex with
LIN-31/WH that inhibits vulval cell fate specification;
upon MAP kinase activation (vulval induction), LIN-1 is
phosphorylated, dissociates from LIN-31, and becomes
inactive, thus allowing for vulval development.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C38C6.2 C38C6.2 P W All gene names: atg-2; C38C6.2; 2O926; CE31162;
NM_064642; WBGene00000225; WP:CE31162
WormBase description: atg-2 encodes an amino acid
transporter glycoprotein subunit; when co-expressed in
Xenopus oocytes with either the AAT-1 or AAT-3
catalytic subunit, ATG-2 facilitates amino acid uptake
and exchange, showing a relatively high affinity for
small and some large neutral amino acids; when
co-expressed with AAT-9, ATG-2 is able to enhance the
activity of this catalytic subunit; ATG-2 can
covalently associate with AAT-1 or AAT-3 in the Xenopus
expression system; when co-expressed with AAT-1 or
AAT-3, ATG-2 localizes to the cell surface of oocytes,
but when expressed alone, ATG-2 localizes
intracellularly.
WormBase CDS description: Alpha amylase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C38C6.3 C38C6.3 P W All gene names: C38C6.3; 2O919; CE15695;
WBGene00007996; WP:CE15695
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C38C6.6 C38C6.6 P W All gene names: tag-297; C38C6.6; C38C6.6.1; C38C6.6.2;
2O915; CE15698; WBGene00007999; WP:CE15698
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C39E9.7 C39E9.7 P W All gene names: C39E9.7; 4N838; CE35427;
WBGene00008031; WP:CE35427
WormBase description: sodium/phosphate transporter
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C40C9.5 C40C9.5 P W All gene names: nlg-1; tag-27; C40C9.5; CE18546;
CE32604; NM_077882; NM_182454; WBGene00006412;
WP:CE18546; WP:CE32604; XO244
WormBase description: Carboxylesterases (2 domains)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C40D2.2 C40D2.2 P W All gene names: math-20; C40D2.2; C40D2.2.1; C40D2.2.2;
2C287; CE19374; WBGene00016555; WP:CE19374
WormBase description: The C40D2.2 gene encodes a
protein closely similar to C46F9.3, which has a
meprin-associated Traf homology (MATH) domain and may
be involved in apoptosis.
WormBase CDS description: possible trans-splice site at
5004
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B
C40D2.3 C40D2.3 P W All gene names: math-21; C40D2.3; 2C279; CE19375;
WBGene00016556; WP:CE19375
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C40H5.3 C40H5.3 P W All gene names: C40H5.3; CE33982; WBGene00008046;
WP:CE33982; XM373
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C41C4.5 C41C4.5 P W All gene names: unc-105; C41C4.5; C41C4.5.1; C41C4.5.2;
2I411; CE23585; NM_063301; WBGene00006832; WP:CE23585
WormBase description: unc-105 encodes a muscle
degenerin, a mechanosensory membrane channel that is a
member of the degenerin ion channel superfamily and
similar to subunits of the mammalian
amiloride-sensitive epithelial sodium channel (ENaC,
OMIM:600761); UNC-105 is required for normal growth and
for normal contraction and organization of muscle,
where it is expressed; UNC-105 interacts with LET-2, an
alpha2 chain of type IV collagen that is also expressed
by muscle and localized to the basement membrane
between muscle and hypodermis.
WormBase CDS description: Amiloride-sensitive sodium
channel
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Transporters,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Dauer Enriched, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C42D4.3 C42D4.3 P W All gene names: C42D4.3; 4H945; CE04191;
WBGene00016596; WP:CE04191
Member of lists (Publications lists):
Bishop et al 2004 T4 57 vhl-1 depend
hif-1 indep, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C42D8.1 C42D8.1 P W All gene names: C42D8.1; CE39693; WBGene00016599;
WP:CE39693; XF729
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
C42D8.5 C42D8.5 P W All gene names: acn-1; C42D8.5; C42D8.5b.1; C42D8.5b.2;
C42D8.5b.3; CE30627; CE37212; WBGene00000039;
WP:CE30627; WP:CE37212; XF712
WormBase description: acn-1 encodes an ACE-like protein
required for larval development and adult
morphogenesis, and probably for cell fusion in larval
seam cells; ACN-1 lacks not only the HExxH consensus
metallopeptidase motif, but also other active site
residues found in the sequence HEAI/VxD of mammalian
and insect ACEs; acn-1 is expressed in hypodermal
cells, vulval precursor cells, and ray papillae in the
male tail; the hypodermal expression of acn-1 appears
to be controlled by nhr-23 and nhr-25.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C43C3.1 C43C3.1 P W All gene names: ifp-1; C43C3.1; CE01523; IF E1;
NM_077227; WBGene00002067; WP:CE01523; XK296
WormBase description: ifp-1 encodes a nonessential
intermediate filament protein; IFP-1 is predicted to
function as a structural component of the cytoskeleton;
IFP-1 has no obvious function in RNAi assays.
WormBase CDS description: intermediate filament protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C43G2.2 C43G2.2 P W All gene names: C43G2.2; 4H330; CE08691;
WBGene00016611; WP:CE08691
WormBase description: cytoskeleton-like protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C44B11.3 C44B11.3 P W All gene names: Alpha-tubulin; mec-12; tba-3; C44B11.3;
C44B11.3.1; C44B11.3.2; 3E222; CE24843; NM_065262;
WBGene00003175; WP:CE24843
WormBase description: mec-12 encodes a novel C. elegans
alpha-tubulin that is unique amongst C. elegans alpha
tubulins in that it may be subject to
post-translational acetylation; MEC-12 is required for
normal mechanosensory response to gentle touch, and
specifically for formation of the 15-protofilament
microtubule bundle present in the touch receptor
neurons; mec-12 interacts genetically with mec-5, which
encodes a unique C. elegans collagen secreted by the
hypodermis; MEC-12 is highly expressed in the touch
neurons as well as in several other neurons that do not
contains the microfilament bundle, such as the ventral
cord motorneurons.
WormBase CDS description: alpha tubulin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003
S4 genes pass two-wayANOVA P0
C44B7.3 C44B7.3 P W All gene names: C44B7.3; 2H152; CE32328;
WBGene00016625; WP:CE32328
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C44B7.9 C44B7.9 P W All gene names: pmp-2; C44B7.9; 2H174; CE02547;
NM_063007; WBGene00004059; WP:CE02547
WormBase description: peroxisomal membrane protein
(PMP70, an ATP-binding transport protein)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C44C1.2 C44C1.2 P W All gene names: C44C1.2; CE30126; WBGene00016642;
WP:CE30126; XB577
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C44H4.1 C44H4.1 P W All gene names: C44H4.1; CE35433; WBGene00008093;
WP:CE35433; XP193
WormBase description: Leucine Rich Repeat (2 copies) (6
domains)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C44H4.2 C44H4.2 P W All gene names: sym-5; C44H4.2; CE08723; NM_078024;
WBGene00006370; WP:CE08723; XP197
WormBase description: sym-5 encodes a predicted
transmembrane protein that contains 13 contiguous
leucine-rich repeats (LRRs) and that is similar to
SYM-1, a secreted protein involved in muscle
attachment; sym-5 activity appears to be required for
embryogenesis and functionally overlaps with that of
sym-1 and mec-8 in affecting muscle attachment; in
addition, loss of sym-5 activity via RNA-mediated
interference (RNAi) in a hypersensitized strain
indicates that SYM-5 may also be required for
locomotion, body morphology, and normal rates of
postembryonic growth.
WormBase CDS description: Drosophila chaoptin protein
like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C44H4.3 C44H4.3 P W All gene names: sym-1; C44H4.3; CE08724; NM_078025;
WBGene00006366; WP:CE08724; XP201
WormBase description: sym-1 encodes a protein
containing 15 contiguous leucine-rich repeats (LRRs)
that functionally overlaps with sym-5 and interacts
with mec-8 with respect to embryonic viability and
attachment of body muscle to the extracellular cuticle;
expression begins at the time of embryonic elongation
and SYM-1 is secreted from the apical hypodermal
surface of the embryo
WormBase CDS description: Drosophila chaoptin protein
like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
C45B2.7 C45B2.7 P W All gene names: ptr-4; C45B2.7; CE30905; NM_076612;
WBGene00004219; WP:CE30905; XG680
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C45G7.6 C45G7.6 P W All gene names: C45G7.6; WBGene00016672
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C45H4.12 C45H4.12 P W All gene names: str-52; C45H4.12; 5C622; CE17553;
NM_071178; WBGene00006117; WP:CE17553
WormBase description: 7TM chemoreceptor, str family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C46G7.1 C46G7.1 P W All gene names: C46G7.1; C46G7.1.1; C46G7.1.2; 4G783;
CE37213; WBGene00016721; WP:CE37213
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C46H11.3 C46H11.3 P W All gene names: C46H11.3; 1F609; AR16; CE08785;
WBGene00016729; WP:CE08785
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C46H11.9 C46H11.9 P W All gene names: phat-2; C46H11.9; 1F614; CE08791;
WBGene00016733; WP:CE08791
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C47E12.6 C47E12.6 P W All gene names: C47E12.6; 4K753; CE32042; CE32043;
WBGene00008150; WP:CE32042; WP:CE32043
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Climbing, Wang et al
2003 S5 genes common to feeding ANOVA, Wang et al 2003
S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C48A7.1 C48A7.1 P W All gene names: eat-12; egl-19; pat-5; C48A7.1; 4I183;
CE28820; CE31165; NM_171379; WBGene00001187;
WP:CE28820; WP:CE31165
WormBase description: egl-19 encodes an ortholog of the
alpha subunit of mammalian L-type calcium ion channels
that affects muscle contraction in late embryonic
morphogenesis, movement, egg-laying, mating and
feeding; egl-19 is expressed in muscle cells and some
neurons.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C48D5.1 C48D5.1 P W All gene names: ceb-1; cnr-8; nhr-6; C48D5.1;
C48D5.1.1; C48D5.1.2; 3E667; CE24859; NM_065330;
WBGene00003605; WP:CE24859; cnr8
WormBase description: nhr-6 encodes a nuclear receptor
of the NR4A4 subfamily that is orthologous to the
mammalian NGFI-B receptors and the Drosophila HR38
nuclear receptor (DHR38) that has been implicated in
molting and metamorphosis; by homology, NHR-6 likely
functions as a transcription factor that, based upon
RNAi experiments, is required for normal ovulation
and/or spermathecal development or function; an nhr-6
reporter fusion is expressed primarily in the anterior
and posterior spermatheca during L3 and L4 larval
stages, with some weak and variable expression also
observed in two chemosensory neurons; nhr-6 mRNA is
expressed in an oscillating manner throughout larval
development, in a pattern that is slightly irregular
with respect to the timing of larval molts and that
exhibits consistently lower expression at the times
when these molts actually occur.
WormBase CDS description: Zinc finger, C4 type (two
domains) ; Ligand-binding domain of nuclear hormone
receptors
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C49A9.3 C49A9.3 P W All gene names: C49A9.3; 4G989; CE31451;
WBGene00016757; WP:CE31451
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown, Wang et
al 2003 S4 Early genes, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
C49A9.9 C49A9.9 P W All gene names: C49A9.9; 4G983; CE27112; CE33570;
WBGene00016763; WP:CE27112; WP:CE33570
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
Romagnolo et al 2002 Fig3b Unkown, Wang et al 2003 S4
Early genes, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C49C8.5 C49C8.5 P W All gene names: C49C8.5; C49C8.5.1; C49C8.5.2; 4J414;
CE31453; WBGene00016769; WP:CE31453
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
C49F8.3 C49F8.3 P W All gene names: C49F8.3; CE05458; WBGene00008215;
WP:CE05458; XO4
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
C50B6.7 C50B6.7 P W All gene names: C50B6.7; 5N804; CE08876;
WBGene00008220; WP:CE08876
WormBase description: amylase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, GO categories,
Reinke et al 2004, herm soma enriched genes, Reinke et
al 2004, list of genes in cluster B, ViswanathanM et al
2005 S2 sir-2.1 regulated
C50H2.1 C50H2.1 P W All gene names: fshr-1; C50H2.1; 5K373; CE28214;
WBGene00008239; WP:CE28214; lgr
WormBase description: C50H2.1 is orthologous to the
human gene FORKHEAD BOX O1A (RHABDOMYOSARCOMA) (FSHR;
OMIM:136533), which when mutated leads to disease.
WormBase CDS description: steroid hormone receptor
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
C52A11.4 C52A11.4 P W All gene names: mpz-1; C52A11.4; 2L48; CE35841;
CE35842; WBGene00003404; WP:CE35841; WP:CE35842
WormBase description: lethal(1) discs large-1 tumor
suppressor protein-like repeats
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C52D10.12 C52D10.12 P W All gene names: C52D10.12; C52D10.12.1; C52D10.12.2;
4S142; CE28434; WBGene00016879; WP:CE28434
WormBase description: C52D10.12 encodes a homolog of
human ACDP1-ACDP4 and a paralog of C01H6.6, C33D12.2,
M02F4.3, R04E5.2, and R13G10.4; both C52D10.12 and
ACDP1-ACDP4 belong to a family of proteins (defined by
NCBI as KOG2118) that are predicted to be
membrane-spanning and that share a motif (the 'ACD
domain') with proteins from bacteria, yeast, plants,
and metazoa; murine Acdp1 is a plasma membrane protein
bacterial proteins containing the ACD domain include
CorC from Salmonella typhimurium, which is involved in
magnesium and cobalt efflux; C52D10.12 has no obvious
function in RNAi assays.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C52D10.2 C52D10.2 P W All gene names: C52D10.2; CE17587; WBGene00016876;
WP:CE17587
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1
elongate lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
C52D10.3 C52D10.3 P W All gene names: C52D10.3; CE36281; WBGene00016877;
WP:CE36281
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
C53B7.1 C53B7.1 P W All gene names: rig-3; C53B7.1; CE06971; NM_076754;
WBGene00004370; WP:CE06971; XH479
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C53B7.4 C53B7.4 P W All gene names: asg-2; C53B7.4; C53B7.4.1; C53B7.4.2;
CE06974; NM_076751; WBGene00000210; WP:CE06974; XH461
WormBase description: asg-2 encodes a homolog of ATP
synthase G required both for growth at a normally high
rate and for normal osmoregulation.
WormBase CDS description: ATP synthase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
C53C9.2 C53C9.2 P W All gene names: C53C9.2; CE27882; WBGene00016898;
WP:CE27882; XI306
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
C54D1.2 C54D1.2 P W All gene names: clec-86; C54D1.2; CE06978;
WBGene00016912; WP:CE06978; XH759
WormBase description: C-type lectin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
C54D1.6 C54D1.6 P W All gene names: bar-1; pvl-1; spy-1; C54D1.6;
C54D1.6.1; C54D1.6.2; CE08973; NM_076805;
WBGene00000238; WP:CE08973; XH786
WormBase description: bar-1 encodes a beta-catenin;
during C. elegans development, BAR-1 likely functions
as a transcriptional coactivator whose activity is
required for Q neuroblast migration, P12 cell fate
specification, and P3.p through P8.p vulval cell fate
specification at two different stages of development;
in specifying vulval cell fates, bar-1 interacts with
Wnt and MAPK signaling pathways to regulate proper
expression of the LIN-39 homeodomain transcription
factor, overexpresion of which can partially rescue the
bar-1 mutant phenotype; in yeast two-hybrid assays,
BAR-1 interacts strongly with the POP-1/TCF
transcription factor, and when fused to the Gal4 DNA
binding domain, BAR-1 can function in yeast as a
transcriptional coactivator; during larval development,
BAR-1 expression begins in P3.p through P8.p at the
late L1 stage and then disappears from these cells by
the mid-L3 stage; BAR-1 is also expressed in P12, in
the seam cells, and in cells of the somatic gonad;
BAR-1 subcellular localization, assessed using an
integrated transgene, reveals localization to the
cytoplasm, nucleus, and cell junctions; genetic mosaic
analyses indicate that, in P4.p and in P12, bar-1 acts
cell autonomously to specify cell fates.
WormBase CDS description: beta-catenin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C54D10.1 C54D10.1 P W All gene names: cdr-2; C54D10.1; 5M894; CE05497;
NM_073713; WBGene00008296; WP:CE05497
WormBase description: glutathione S-transferase
Member of lists (Publications lists):
Kwon et al 2004 T1 late-induction
Ethanol-response, Murphy et al 2003 Fig2 Class1
elongate lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
C55B7.2 C55B7.2 P W All gene names: gly-2; C55B7.2; C55B7.2.1; C55B7.2.2;
1H87; CE27887; NM_059473; WBGene00001627; WP:CE27887
WormBase description: gly-2 encodes a functional
homolog of mammalian UDP-N-acetylglucosamine
alpha-6-d-mannoside
beta-1,6-N-acetylglucosaminyltransferase V (GlcNAc-TV)
which regulates polylactosamine-containing N-glycans;
gly-2 is functionally interchangeable with the
mammalian gene; GLY-2 is expressed in late embryos and
in a subset of neurons in larvae, spermathecal and
pharyngeal-intestinal valves and in specific vulval
cells of adults.
WormBase CDS description:
alpha-1,3(6)-mannosylglycoprotein
beta-1,6-N-acetyl-glucosaminyltransferase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
C56C10.4 C56C10.4 P W All gene names: C56C10.4; 2G873; CE02569;
WBGene00016962; WP:CE02569
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
D1005.2 D1005.2 P W All gene names: D1005.2; CE29741; WBGene00016996;
WP:CE29741; XC81
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
D1037.3 D1037.3 P W All gene names: ftn-2; D1037.3; D1037.3.1; D1037.3.2;
1E248; CE20622; NM_058797; WBGene00001501; WP:CE20622
WormBase description: ftn-2 encodes one of two C.
elegans ferritin heavy chain homologs; loss of ftn-2
activity via deletion mutation results in slightly
lower brood sizes and, under iron stress conditions,
slightly faster growth from the L4 to adult stage of
development, and slightly reduced lifespan; an
ftn-2::gfp reporter fusion is expressed in diverse
tissues, including the pharynx, intestine, and
hypodermis, and its expression, along with that of
ftn-2 mRNA, does not appear to change significantly
under iron stress conditions.
WormBase CDS description: ferritin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
D2024.4 D2024.4 P W All gene names: D2024.4; 4H997; CE04293;
WBGene00017052; WP:CE04293
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
D2092.8 D2092.8 P W All gene names: D2092.8; 1H197; CE09107;
WBGene00017068; WP:CE09107
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
E01A2.8 E01A2.8 P W All gene names: E01A2.8; 1E714; CE24875;
WBGene00017090; WP:CE24875
WormBase description: The E01A2.8 gene encodes one of
five paraoxonase-like proteins; it is homologous to the
human PARAOXONASE 1 gene (PON1, OMIM:168820), which in
some allelic forms is associated with susceptibility to
coronary artery disease.
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1
elongate lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S6 removed genes of
contamination
E02H9.2 E02H9.2 P W All gene names: E02H9.2; 3D555; CE26882;
WBGene00017100; WP:CE26882
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
E04A4.7 E04A4.7 P W All gene names: E04A4.7; E04A4.7.1; E04A4.7.2;
E04A4.7.3; E04A4.7.4; CE16968; NM_068228;
WBGene00017121; WP:CE16968
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: cytochrome C
Member of lists (Publications lists):
Golden et al 2004, N2 vs daf-2
different genes at , McCarroll et al 2004 SFig5
conserved w/ yeast, McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
E04F6.6 E04F6.6 P W All gene names: E04F6.6; 2H488; CE27909;
WBGene00017126; WP:CE27909
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F01D5.6 F01D5.6 P W All gene names: F01D5.6; 2O297; CE18563;
WBGene00008496; WP:CE18563
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F01E11.1 F01E11.1 P W All gene names: ugt-57; F01E11.1; CE04327;
WBGene00017154; WP:CE04327; XH611
WormBase description: 7TM chemoreceptor, ugt family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F01G10.10 F01G10.10 P W All gene names: F01G10.10; 4L13; CE36123;
WBGene00008512; WP:CE36123
WormBase description: lipopolysaccharide-binding
protein like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F01G10.2 F01G10.2 P W All gene names: ech-8; F01G10.2; 4L2; CE35450;
NM_069475; WBGene00001157; WP:CE35450
WormBase description: enoyl-CoA hydratase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F01G10.6 F01G10.6 P W All gene names: F01G10.6; 4K990; CE09168;
WBGene00008509; WP:CE09168
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F02A9.2 F02A9.2 P W All gene names: far-1; F02A9.2; F02A9.2.1; F02A9.2.2;
F02A9.2.3; 3K170; CE00133; NM_066609; WBGene00001385;
WP:CE00133
WormBase description: far-1 encodes a fatty
acid/retinol binding protein; expressed throughout
development with highest expression levels in L3 stage
larvae and in adult males.
WormBase CDS description: O. volvulus 20Kd antigenic
peptide
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F02D8.2 F02D8.2 P W All gene names: grd-12; F02D8.2; 5P457; CE09180;
NM_074281; WBGene00001701; WP:CE09180
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F07A11.5 F07A11.5 P W All gene names: F07A11.5; 2L903; CE03147;
WBGene00008548; WP:CE03147
WormBase description: ribokinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F07C3.7 F07C3.7 P W All gene names: aat-2; F07C3.7; 5J726; CE32853;
NM_072993; WBGene00000003; WP:CE32853
WormBase description: aat-2 encodes a predicted amino
acid transporter catalytic subunit; when co-expressed
in Xenopus oocytes with a glycoprotein subunit,
however, AAT-2 is not able to induce amino acid uptake.
WormBase CDS description: amino acid permease
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F07C4.7 F07C4.7 P W All gene names: grsp-4; F07C4.7; 5I105; CE09206;
WBGene00017201; WP:CE09206
Member of lists (Publications lists):
Bishop et al 2004 T1 Upregulated in
vhl-1 vs WT, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F07D10.1 F07D10.1 P W All gene names: rpl-11.2; F07D10.1; F07D10.1.1;
F07D10.1.2; F07D10.1.3; CE07033; NM_076012;
WBGene00004423; WP:CE07033; XC860
WormBase description: rpl-11.2 encodes a large
ribosomal subunit L11 protein; by homology, RPL-11.2 is
predicted to function in protein biosynthesis.
WormBase CDS description: ribosomal protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F08B12.1 F08B12.1 P W All gene names: F08B12.1; CE03162; WBGene00008571;
WP:CE03162; XM11
WormBase description: F08B12.1 is orthologous to the
human gene AC133-2 ANTIGEN (PROML1; OMIM:604365), which
when mutated leads to disease.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F08B12.2 F08B12.2 P W All gene names: prx-12; F08B12.2; CE03163; NM_077507;
WBGene00004197; WP:CE03163; XM13
WormBase description: Zinc finger, C3HC4 type (RING
finger)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F08C6.1 F08C6.1 P W All gene names: adt-2; F08C6.1; F08C6.1a.1; F08C6.1a.2;
CE33772; CE33991; CE33992; WBGene00000083; WP:CE33772;
WP:CE33991; WP:CE33992; XI213
WormBase description: Thrombospondin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F08C6.3 F08C6.3 P W All gene names: tag-197; F08C6.3; F08C6.3.1; F08C6.3.2;
CE30938; WBGene00007059; WBGene00017242; WP:CE30938;
XI185
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, list of genes in cluster B
F08D12.12 F08D12.12 P W All gene names: F08D12.12; F08D12.12.1; F08D12.12.2;
2D72; CE37221; WBGene00017255; WP:CE37221
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F08F1.6 F08F1.6 P W All gene names: spp-13; F08F1.6; CE09253; NM_077027;
WBGene00004998; WP:CE09253; XJ36
WormBase description: 7TM chemoreceptor, spp family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F08F1.7 F08F1.7 P W All gene names: tag-123; F08F1.7; CE09254;
WBGene00006472; WP:CE09254; XJ38
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F09B9.1 F09B9.1 P W All gene names: F09B9.1; CE15758; WBGene00008602;
WP:CE15758; XK758
Member of lists (Publications lists):
GuhaThakurta et al 2002 T1 upregu on
heat stress, Jiang et al 2001 Fig1 male-enriched
neuronal, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
F09B9.3 F09B9.3 P W All gene names: erd-2; F09B9.3; CE23635; ERD2;
NM_077302; WBGene00001331; WP:CE23635; XK776
WormBase description: erd-2 encodes a protein with
homology to human ER lumen protein retaining receptor
1.
WormBase CDS description: ER lumen protein retaining
receptor
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F09C11.1 F09C11.1 P W All gene names: F09C11.1; 4B294; CE16970;
WBGene00017276; WP:CE16970
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F09C3.1 F09C3.1 P W All gene names: pes-7; tag-2; F09C3.1; 1O861; CE23636;
NM_061091; WBGene00003980; WP:CE23636
WormBase description: pes-7 encodes an ortholog of the
vertebrate IQGAP proteins, actin- and CLIP-170-binding
proteins that serve as effectors for the Rho family
GTPases Rac1 and Cdc42; IQGAP's alpha-actinin domain is
related distantly to alpha-actinin domains in calponin,
transgelin (SM22 alpha), and the proto-oncogene Vav;
pes-7 was identified in promoter-trapping screens and
by homology, is predicted to function as a key
regulator of cytoskeletal organization in migrating
cells and as a regulator of cadherin-mediated cell-cell
adhesion; however, PES-7 has no obvious function in
mass RNAi assays; a pes-7 reporter is first expressed
in the ventral nerve cord of the elongating embryo and
in later stages of development is also expressed in all
major ganglia, the vulva, and in the spermathecal
valves; in the ventral nerve cord, pes-7 expression is
detected in nuclei as well as in cell bodies and neural
processes.
WormBase CDS description: ras GTPase-activating protein
like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F09F9.2 F09F9.2 P W All gene names: F09F9.2; CE04347; WBGene00017307;
WP:CE04347; XE728
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F10D7.2 F10D7.2 P W All gene names: F10D7.2; F10D7.2.1; F10D7.2.2; CE04352;
WBGene00017339; WP:CE04352; XR980
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: calcium alpha subunit;
tetracycline resistance
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Transporters,
Wang et al 2003 S5 genes common to feeding ANOVA, Wang
et al 2003 S3 genes pass one-way ANOVA
F10D7.3 F10D7.3 P W All gene names: F10D7.3; CE29754; WBGene00017340;
WP:CE29754; XR988
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 68%
accuracy, to be mitochondrial.
WormBase CDS description: glutaredoxin
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 TransientList, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F10E7.4 F10E7.4 P W All gene names: F10E7.4; 2H409; CE32368;
WBGene00017346; WP:CE32368
WormBase description: F-spondin
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F10F2.3 F10F2.3 P W All gene names: F10F2.3; 3F705; CE00948;
WBGene00008655; WP:CE00948
WormBase description: lipase (Bacillus subtilis)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F11E6.6 F11E6.6 P W All gene names: F11E6.6; 4S408; CE35464;
WBGene00008709; WP:CE35464
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
F11E6.8 F11E6.8 P W All gene names: F11E6.8; 4S388; CE19788;
WBGene00008711; WP:CE19788
WormBase description: Eukaryotic protein kinase domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F13B6.1 F13B6.1 P W All gene names: F13B6.1; 4I223; CE16973;
WBGene00017416; WP:CE16973
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, Reinke et al 2004, IVb male soma enriched
genes, Wang et al 2003 S4 Climbing, Wang et al 2003
S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
F13B9.2 F13B9.2 P W All gene names: F13B9.2; CE04379; WBGene00017420;
WP:CE04379; XI905
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown
F13D2.1 F13D2.1 P W All gene names: F13D2.1; CE37347; WBGene00008735;
WP:CE37347; XL784
WormBase description: alpha-1-macroglobulin-like domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F13G3.1 F13G3.1 P W All gene names: ztf-2; F13G3.1; 1H871; CE05613;
WBGene00008762; WP:CE05613
WormBase description: Zinc finger, C2H2 type
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F13H6.1 F13H6.1 P W All gene names: F13H6.1; 5G841; CE30755;
WBGene00017430; WP:CE30755
WormBase description: zinc-finger protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F14B6.2 F14B6.2 P W All gene names: F14B6.2; 1M812; CE25855;
WBGene00008783; WP:CE25855
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F14F3.3 F14F3.3 P W All gene names: tag-289; F14F3.3; CE02189;
WBGene00008806; WP:CE02189; XL142
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, list of genes in cluster B, ViswanathanM et
al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4
Early genes, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F15A2.7 F15A2.7 P W All gene names: F15A2.7; CE05636; WBGene00008836;
WP:CE05636; XO109
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F15B9.8 F15B9.8 P W All gene names: F15B9.8; 5N471; CE20686;
WBGene00008851; WP:CE20686
WormBase description: Thrombospondin type 1 domain
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F15E6.2 F15E6.2 P W All gene names: F15E6.2; 4F67; CE36293; WBGene00017483;
WP:CE36293
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F16B4.4 F16B4.4 P W All gene names: F16B4.4; 5C73; CE17014; WBGene00017506;
WP:CE17014
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
F16F9.2 F16F9.2 P W All gene names: dpy-6; F16F9.2; CE30956; NM_077034;
WBGene00001068; WP:CE30956; XJ70
WormBase description: dpy-6 encodes a novel, conserved
protein; dpy-6 activity is required for normal body
morphology.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F16H11.5 F16H11.5 P W All gene names: nhr-45; F16H11.5; CE33052; NM_076396;
WBGene00003635; WP:CE33052; XF276
WormBase description: zinc finger DNA-binding protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F17A9.4 F17A9.4 P W All gene names: F17A9.4; 5G590; CE09448;
WBGene00017536; WP:CE09448
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S4 TransientList, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
F18A11.2 F18A11.2 P W All gene names: F18A11.2; 2N325; CE09452;
WBGene00008929; WP:CE09452
WormBase description: retinal-binding like protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F18F11.4 F18F11.4 P W All gene names: F18F11.4; 4B87; CE39243;
WBGene00017577; WP:CE39243
WormBase description: serine/threonine-protein kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, GO categories, Reinke
et al 2004, list of genes in cluster B, ViswanathanM et
al 2005 S2 sir-2.1 regulated
F19B2.5 F19B2.5 P W All gene names: F19B2.5; F19B2.C; 5U632; CE20697;
WBGene00008944; WP:CE20697
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Zhang et al 2002, T1 mec-3 dependent genes
F19C7.8 F19C7.8 P W All gene names: F19C7.8; 4F376; CE31685; CE31686;
WBGene00017597; WP:CE31685; WP:CE31686
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F19H6.1 F19H6.1 P W All gene names: F19H6.1; CE31484; WBGene00008956;
WP:CE31484; XN8
WormBase description: serine/threonine kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F19H8.2 F19H8.2 P W All gene names: F19H8.2; 2O888; CE15871;
WBGene00008963; WP:CE15871
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F20G2.3 F20G2.3 P W All gene names: F20G2.3; 5O246; CE09506;
WBGene00008987; WP:CE09506
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F21C10.8 F21C10.8 P W All gene names: pqn-31; F21C10.8; 5J591; CE07123;
CE35283; WBGene00004119; WP:CE07123; WP:CE35283
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, fem3 enriched genes, Reinke et al
2004, list of genes in cluster B, ViswanathanM et al
2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2
daf-16 Resveratrol
F21G4.1 F21G4.1 P W All gene names: F21G4.1; F21G4.1.1; F21G4.1.2; CE37359;
WBGene00009023; WP:CE37359; XK508
WormBase description: Rat prostoglandin transporter
like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F21G4.3 F21G4.3 P W All gene names: F21G4.3; CE09549; WBGene00009024;
WP:CE09549; XK513
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 Resveratrol
regulate WT
F22A3.5 F22A3.5 P W All gene names: ceh-60; F22A3.5; CE38506;
WBGene00017690; WP:CE38506; XH142
WormBase description: homeotic protein PBX2
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, GO categories, Reinke
et al 2004, herm soma enriched genes, Reinke et al
2004, list of genes in cluster B, Romagnolo et al 2002
Fig3b Unkown, ViswanathanM et al 2005 S2 sir-2.1
regulated
F22B7.10 F22B7.10 P W All gene names: dpy-19; F22B7.10; 3J750; CE26462;
NM_066508; WBGene00001078; WP:CE26462
WormBase description: The dpy-19 gene encodes a novel
transmembrane protein whose human homolog is expressed
in brain, and that is required for correct polarization
and migration of the neuroblasts QL and QR.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F22F4.1 F22F4.1 P W All gene names: F22F4.1; CE07126; WBGene00017716;
WP:CE07126; XG625
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F23F1.4 F23F1.4 P W All gene names: F23F1.4; 2A318; CE32635;
WBGene00017745; WP:CE32635
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F23H12.4 F23H12.4 P W All gene names: col-1; dpy-15; sqt-3; F23H12.4;
F23H12.4.1; F23H12.4.2; 5M833; CE05707; NM_073694;
WBGene00005018; WP:CE05707
WormBase description: collagen
Member of lists (Publications lists):
Baugh et al 2005, PAL-1 target genes,
Golden et al 2004, daf-2 differentially expressed ,
Golden et al 2004, N2 vs daf-2 different genes at ,
ReichertK et al 2005 T2 xenobiotic induced Collag,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 Resveratrol regulate WT,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003
S4 LateList
F23H12.5 F23H12.5 P W All gene names: F23H12.5; 5M843; CE05708;
WBGene00009094; WP:CE05708
WormBase description: Thrombospondin type 1 domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F25B4.6 F25B4.6 P W All gene names: phi-50; F25B4.6; 5G164; CE09624;
WBGene00017769; WP:CE09624
WormBase description: F25B4.6 is orthologous to the
human gene 3-HYDROXY-3-METHYLGLUTARYL COA SYNTHASE
(HMGCS2; OMIM:600234), which when mutated leads to
disease.
WormBase CDS description: hydroxymethlglutaryl-CoA
synthase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
F25B5.1 F25B5.1 P W All gene names: F25B5.1; 3H59; CE39493; CE39494;
WBGene00017773; WP:CE39493; WP:CE39494
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F25D1.3 F25D1.3 P W All gene names: F25D1.3; 5L9; CE31917; WBGene00009108;
WP:CE31917
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F25H8.6 F25H8.6 P W All gene names: F25H8.6; 4K689; CE05731;
WBGene00009133; WP:CE05731
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA,
Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes
pass two-wayANOVA P0
F26A1.9 F26A1.9 P W All gene names: F26A1.9; 3F910; CE29287;
WBGene00017807; WP:CE29287
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F26A10.2 F26A10.2 P W All gene names: F26A10.2; CE02692; WBGene00017814;
WP:CE02692; XI252
WormBase description: F26A10.2 encodes a protein with
four zinc-finger domains and a
glutamine/asparagine-rich domain, that is required for
maintenance of the germline and for locomotion;
F26A10.2(RNAi) animals are uncoordinated and have
sterile progeny.
WormBase CDS description: Zinc finger
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F26E4.3 F26E4.3 P W All gene names: F26E4.3; 1K340; CE17714;
WBGene00009158; WP:CE17714
WormBase description: cysteine protease
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, GO categories, Reinke et al
2004, list of genes in cluster B, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 Climbing,
Wang et al 2003 S4 genes pass two-wayANOVA P0
F26G1.5 F26G1.5 P W All gene names: F26G1.5; 2F60; CE02697; WBGene00017841;
WP:CE02697
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F27C8.1 F27C8.1 P W All gene names: aat-1; F27C8.1; 4K364; CE03266;
NM_069306; WBGene00000002; WP:CE03266
WormBase description: aat-1 encodes an amino acid
transporter catalytic subunit; when co-expressed in
Xenopus oocytes with the ATG-2 glycoprotein subunit,
AAT-1 is able to facilitate amino acid uptake and
exchange, showing a relatively high affinity for small
and some large neutral amino acids; in addition, AAT-1
is able to covalently associate with ATG-2 or ATG-1 to
form heterodimers in the Xenopus expression system;
when co-expressed with ATG-2, AAT-1 localizes to the
cell surface of oocytes, but when expressed alone or
with ATG-1, AAT-1 localizes intracellularly.
WormBase CDS description: integral membrane protein E16
like
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F27C8.3 F27C8.3 P W All gene names: F27C8.3; 4K360; CE03268;
WBGene00009184; WP:CE03268
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F27D9.5 F27D9.5 P W All gene names: F27D9.5; CE04451; WBGene00017864;
WP:CE04451; XI276
WormBase description: The F27D9.5 gene encodes an
ortholog of the human gene PROPIONYL-COA CARBOXYLASE
ALPHA SUBUNIT (PCCA), which when mutated leads to
propionicaciduria, type I (OMIM:232000).
WormBase CDS description: Propionyl-coA carboxylase
alpha chain precursor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F27D9.6 F27D9.6 P W All gene names: dhs-29; F27D9.6; CE28011; NM_076893;
WBGene00000992; WP:CE28011; XI282
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F27E5.4 F27E5.4 P W All gene names: phas-1; phg-1; F27E5.4; 2K425; CE30964;
NM_063785; WBGene00004017; WP:CE30964
WormBase description: growth arrest protein
extracellular domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F28C6.5 F28C6.5 P W All gene names: F28C6.5; 2I891; CE03276;
WBGene00009205; WP:CE03276
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F28D1.11 F28D1.11 P W All gene names: F28D1.11; 4N157; CE20732;
WBGene00009219; WP:CE20732
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S5 genes common to
feeding ANOVA, Wang et al 2003 S3 genes pass one-way
ANOVA
F28G4.4 F28G4.4 P W All gene names: F28G4.4; 5Q762; CE35511;
WBGene00009229; WP:CE35511
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F29C12.1 F29C12.1 P W All gene names: pqn-32; F29C12.1; F29C12.1a.1;
F29C12.1a.2; 2N399; CE19820; CE37902; WBGene00004120;
WP:CE19820; WP:CE37902
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F29G6.1 F29G6.1 P W All gene names: F29G6.1; CE34177; WBGene00009257;
WP:CE34177; XM127
WormBase description: kazal-type proteinase inhibitor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Proteases,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F29G9.4 F29G9.4 P W All gene names: evl-5; fos-1; F29G9.4; 5G495; CE27375;
CE39151; WBGene00001345; WBGene00017932; WP:CE27375;
WP:CE39151
WormBase description: fos-1 encodes two basic
region-leucine zipper (bZip) transcription factors,
FOS-1A and FOS-1B, that are the sole C. elegans
orthologs of the fos bZip transcription factor family;
during hermaphrodite development, FOS-1A activity is
required cell autonomously in the gonadal anchor cell
for basement-membrane removal and subsequent anchor
cell invasion of the vulval epithelium; in addition,
fos-1 activity is also required for proper vulval and
uterine development, fertility, and oogenesis; in
late-L3 larvae, a FOS-1A translational fusion protein
is expressed at high levels in the anchor cell nucleus
and at lower levels in uterine cells, while a FOS-1B
reporter is expressed at low levels in the anchor cell,
uterine, and vulval cells; transcriptional reporters
additionally reveal that fos-1b is expressed in most
cells of late L3 larvae; in affecting anchor cell
invasion, FOS-1A appears to act by regulating the
expression of three AC-expressed genes: cdh-3/cadherin,
him-4/hemicentin, and zmp-1/matrix metalloproteinase,
which likely function together to promote anchor cell
invasion.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F30F8.5 F30F8.5 P W All gene names: F30F8.5; 1I424; CE37511;
WBGene00009274; WP:CE37511
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F31C3.6 F31C3.6 P W All gene names: F31C3.6; 1P646; CE24930;
WBGene00009288; WP:CE24930
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F31F6.5 F31F6.5 P W All gene names: daf-6; ptr-7; F31F6.5; CE38955;
NM_078071; WBGene00000902; WP:CE38955; XP511
WormBase description: daf-6 is required for an
unidentified function of the nonneuronal amphidial
sheath cells that promotes correct morphology of both
the amphid and the outer labial sensilla; daf-6 mutants
disrupt the joining of the amphid sheath and socket
cells to form the receptor channel, and display defects
in several distinct functions including formation of
dauer larvae, chemotaxis, osmotic avoidance, male
mating, negative regulation of lifespan, negative
regulation of ASJ's axonal growth late in development,
and dye uptake by amphids and phasmids; daf-6 has
recently been reported to be identical to the coding
sequence ptr-7/F31F6.5, but this assertion has not yet
been verified by transgenic rescue.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F32B5.7 F32B5.7 P W All gene names: F32B5.7; F32B5.7.1; F32B5.7.2; 1D242;
CE30526; WBGene00017980; WP:CE30526
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
F32D8.7 F32D8.7 P W All gene names: F32D8.7; 5L379; CE05786;
WBGene00009331; WP:CE05786
WormBase description: Kunitz/Bovine pancreatic trypsin
inhibitor domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F32E10.3 F32E10.3 P W All gene names: F32E10.3; 4I337; CE37227;
WBGene00017991; WP:CE37227
WormBase description: LDL-receptor ligand-binding
repeat
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F32F2.1 F32F2.1 P W All gene names: uig-1; F32F2.1; 5N754; CE18658;
WBGene00009337; WP:CE18658
WormBase description: Guanine nucleotide exchange
factor for Rho/Rac/Cdc42-like GTPases
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
F33C8.1 F33C8.1 P W All gene names: tag-53; F33C8.1; CE32400; CE32401;
WBGene00006432; WP:CE32400; WP:CE32401; XP337
WormBase description: tag-53 encodes a protein with
high similarity to human Attractin, and affects
fertility and locomotion.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
F33D11.3 F33D11.3 P W All gene names: col-54; F33D11.3; 1G421; CE09893;
NM_059293; WBGene00000631; WP:CE09893
WormBase description: collagen
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F33E2.2 F33E2.2 P W All gene names: dlk-1; F33E2.2; 1N158; CE36153;
CE36154; CE36155; WBGene00001008; WP:CE36153;
WP:CE36154; WP:CE36155
WormBase description: dlk-1 encodes a homolog of
mammalian mitogen-activated protein kinase kinase
kinase 12; DLK-1 is dispensable for embryonic
development and gross morphology in mass RNAi screens.
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S7 SAGE genes in the dataset, Wang et al 2003
S8 SAGE genes in the dauer exit
F33H2.8 F33H2.8 P W All gene names: F33H2.8; 1P622; CE37514;
WBGene00009371; WP:CE37514
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F35B12.4 F35B12.4 P W All gene names: F35B12.4; 5M90; CE05803;
WBGene00009384; WP:CE05803
WormBase description: serine protease inhibitor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F35B12.7 F35B12.7 P W All gene names: nlp-24; F35B12.7; F35B12.7.1;
F35B12.7.2; 5M97; CE37515; NM_073545; WBGene00003762;
WP:CE37515
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F35D2.1 F35D2.1 P W All gene names: F35D2.1; 2H865; CE02723;
WBGene00018039; WP:CE02723
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F35E12.8 F35E12.8 P W All gene names: F35E12.8; 5O230; CE32403;
WBGene00009432; WP:CE32403
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F35E12.9 F35E12.9 P W All gene names: F35E12.9; 5O222; CE32404; CE38514;
WBGene00009433; WP:CE32404; WP:CE38514
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F35F10.6 F35F10.6 P W All gene names: F35F10.6; 5D762; CE09931;
WBGene00018056; WP:CE09931
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S6 removed genes of
contamination
F35G12.6 F35G12.6 P W All gene names: mab-21; F35G12.6; 3F691; CE32651;
NM_065539; WBGene00003112; WP:CE32651
WormBase description: mab-21 encodes a novel protein
that is a member of a highly conserved family of
proteins with Drosophila and vertebrate orthologs;
MAB-21 is cell-autonomously required for specifying the
identity of sensory ray 6 in the male tail, and also
for backward locomotion, normal body morphology,
fecundity, and embryonic morphogenesis; MAB-21
expression begins in embryonic hypodermal cells and
continues in larval and adult animals in hypodermis,
anterior and ventral cord neurons, some body wall
muscles, and ray cells.
Member of lists (Publications lists):
Baugh et al 2005, validated PAL-1
target genes, Baugh et al 2005, PAL-1 target genes,
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Early genes, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F35H10.10 F35H10.10 P W All gene names: CELF35-1; F35H10.10; 4J72; CE24945;
WBGene00018073; WP:CE24945
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
F36A4.10 F36A4.10 P W All gene names: alpha-collagen; col-34; ram-4;
F36A4.10; 4F8; CE07185; NM_068119; WBGene00000611;
WP:CE07185
WormBase description: col-34 encodes a cuticle collagen
protein and is a critical component of male tail
cuticle organization affecting ray morphology.
WormBase CDS description: cuticular collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0,
Wang et al 2003 S4 LateList
F36G3.1 F36G3.1 P W All gene names: F36G3.1; CE15979; WBGene00009482;
WP:CE15979; XK400
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F36H5.1 F36H5.1 P W All gene names: math-26; F36H5.1; F36H5.1.1; F36H5.1.2;
2C63; CE27156; WBGene00018100; WP:CE27156
WormBase description: The F36H5.1 gene encodes a
protein closely similar to F36H5.2, which has a
meprin-associated Traf homology (MATH) domain and may
be involved in apoptosis.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F37C4.4 F37C4.4 P W All gene names: F37C4.4; F37C4.4b.1; F37C4.4b.2; 4E635;
CE17047; CE31505; WBGene00018144; WP:CE17047;
WP:CE31505
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F38A1.10 F38A1.10 P W All gene names: F38A1.10; 4B998; CE10022;
WBGene00009523; WP:CE10022
WormBase description: receptor like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S4 Early genes, Wang et al 2003 S3 genes
pass one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F38A3.2 F38A3.2 P W All gene names: col-82; ram-2; ram-3; F38A3.2; 2L306;
CE02214; NM_063961; WBGene00004300; WP:CE02214
WormBase description: ram-2 encodes a cuticle collagen
that interacts with unc-6 to affect ray cell migration,
and interacts with unc-5 and unc-6 to affect embryonic
viability; also affects ray morphology in males such
that the structural cells and the hypodermis of the
rays are swollen in mutants.
WormBase CDS description: collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0,
Wang et al 2003 S4 LateList
F38A6.1 F38A6.1 P W All gene names: Ce-fkh-1; fkh-1; pha-4; F38A6.1; 5V229;
CE15998; NM_075605; WBGene00004013; WP:CE15998
WormBase description: Fork head domain, eukaryotic
transcription factors
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S8 SAGE genes in the dauer exit
F38E11.3 F38E11.3 P W All gene names: cpin-1; F38E11.3; 4K215; CE26624;
NM_069268; WBGene00000775; WP:CE26624
WormBase description: cpi-1 is orthologous to a
mammalian protein variously identified as guanine
aminohydrolase (or guanine deaminase, or guanase),
cypin, or p51-nedasin.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F40A3.3 F40A3.3 P W All gene names: F40A3.3; F40A3.3b.1; F40A3.3b.2; 5I359;
CE10146; CE38516; WBGene00018218; WP:CE10146;
WP:CE38516
WormBase description: phosphatidylethanolamine binding
protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke
et al 2004, list of genes in cluster order, Reinke et
al 2004, mixed oogenesis soma, Reinke et al 2004, list
of genes in cluster B, ViswanathanM et al 2005 S2
sir-2.1 regulated, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al
2003 S4 genes pass two-wayANOVA P0
F40A3.6 F40A3.6 P W All gene names: F40A3.6; 5I372; CE10152;
WBGene00018221; WP:CE10152
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F40E10.3 F40E10.3 P W All gene names: csq-1; F40E10.3; F40E10.3.1;
F40E10.3.2; CE05839; NM_078037; WBGene00000822;
WP:CE05839; XP305
WormBase description: calsequestrin like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Roy et al 2002 S2 positivecontrol L1
muscle, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes
pass two-wayANOVA P0
F40E10.5 F40E10.5 P W All gene names: F40E10.5; CE05840; NM_078040;
WBGene00009573; WP:CE05840; XP321
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S6 removed genes of
contamination
F40F4.7 F40F4.7 P W All gene names: F40F4.7; CE28316; WBGene00018238;
WP:CE28316; XD864
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
F40F9.5 F40F9.5 P W All gene names: F40F9.5; 5K202; CE37834;
WBGene00009582; WP:CE37834
WormBase description: translocase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F41B4.4 F41B4.4 P W All gene names: glr-6; F41B4.4; CE30983; CE35715;
NM_171712; NM_171713; WBGene00001617; WP:CE30983;
WP:CE35715; XH456
WormBase description: ligand-gated ionic channel
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F41C3.11 F41C3.11 P W All gene names: F41C3.11; 2F24; CE37372;
WBGene00018275; WP:CE37372
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
F41C3.7 F41C3.7 P W All gene names: F41C3.7; 2F25; CE39935; WBGene00018273;
WP:CE39935
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Dauer Enriched, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F41C6.1 F41C6.1 P W All gene names: unc-106; unc-6; F41C6.1; F41C6.1.1;
F41C6.1.2; CE04538; NM_076764; WBGene00006746;
WP:CE04538; XH515
WormBase description: unc-6 encodes a netrin
orthologous to the human and mouse netrin-1 precursor
proteins; UNC-6 functions as a guidance molecule that
regulates the migrations of pioneer axons and
mesodermal cells, such as the gonadal distal tip cell,
along the dorsoventral axis; a secreted molecule, UNC-6
is expressed during embryogenesis by epidermoblasts and
neurons; UNC-6 is involved in both attractive and
repulsive interactions that are mediated by the UNC-40
and UNC-5 netrin receptors, respectively.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
F41C6.5 F41C6.5 P W All gene names: col-173; F41C6.5; CE04542; NM_076761;
WBGene00000746; WP:CE04542; XH494
WormBase description: cuticular collagen
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F41D9.2 F41D9.2 P W All gene names: F41D9.2; CE10238; WBGene00018282;
WP:CE10238; XJ2
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F41E6.14 F41E6.14 P W All gene names: F41E6.14; 5J112; CE10270;
WBGene00018295; WP:CE10270
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F41F3.3 F41F3.3 P W All gene names: F41F3.3; F41F3.3.1; F41F3.3.2; 5F126;
CE07217; WBGene00018297; WP:CE07217
WormBase description: cuticlin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, wt herm vs wt herm enriched gen,
Reinke et al 2004, fem3 enriched genes, Reinke et al
2004, list of genes in cluster B, ViswanathanM et al
2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2
daf-16 Resveratrol
F42E11.4 F42E11.4 P W All gene names: tni-1; F42E11.4; CE03311; NM_077505;
WBGene00006584; WP:CE03311; XL994
WormBase description: tni-1 encodes a member of the
troponin family that affects body morphology,
locomotion, egg laying, and epithelial morphogenesis in
a large-scale RNAi analysis.
WormBase CDS description: troponin I
Member of lists (Publications lists):
Lund et al 2002 Aging time course
Fig3A muscle, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F42G8.11 F42G8.11 P W All gene names: sph-1; F42G8.11; 4I896; CE17070;
NM_068959; WBGene00004979; WP:CE17070
WormBase description: sph-1 encodes a member of the
synaptophysin/synaptoporin family that contains a
MARVEL domain, a membrane-associating domain found in
lipid-associating proteins, and contains a
transmembrane domain.
WormBase CDS description: synaptic vesicle channel
protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F42G9.2 F42G9.2 P W All gene names: cyn-6; cyp-6; F42G9.2; 3B391; CE01301;
NM_064856; WBGene00000882; WP:CE01301
WormBase description: cyp-6 encodes a cyclophilin most
similar to human secreted cyclophilin type B isoforms
that is functional when expressed in E. coli; it is
expressed in the intestine.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
F42H10.3 F42H10.3 P W All gene names: F42H10.3; 3J577; CE37108;
WBGene00018367; WP:CE37108
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F42H10.4 F42H10.4 P W All gene names: F42H10.4; WBGene00018368
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated
genes, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
F43B10.2 F43B10.2 P W All gene names: tag-343; F43B10.2; CE35536;
WBGene00018374; WP:CE35536; XR280
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F43C9.1 F43C9.1 P W All gene names: F43C9.1; CE04564; WBGene00018375;
WP:CE04564; XF415
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
F43D9.1 F43D9.1 P W All gene names: F43D9.1; 3L589; CE32661;
WBGene00009653; WP:CE32661
WormBase description: Band 4.1 domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F44A2.5 F44A2.5 P W All gene names: F44A2.5; F44A2.5a.1; F44A2.5a.2; 5J781;
CE33088; CE33089; WBGene00018405; WP:CE33088;
WP:CE33089
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F44E2.4 F44E2.4 P W All gene names: F44E2.4; 3J922; CE28232;
WBGene00018418; WP:CE28232
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 Resveratrol
regulate WT, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
LateList, Wang et al 2003 S4 genes pass two-wayANOVA
P0
F44E5.4 F44E5.4 P W All gene names: F44E5.4; F44E5.4.1; F44E5.4.2; 2M48;
CE18679; WBGene00009691; WP:CE18679
WormBase description: Heat shock hsp70 proteins
Member of lists (Publications lists):
Custodia et al 2001 T2 heat shock,
GuhaThakurta et al 2002 T1 upregu on heat stress, Lund
et al 2002 Aging time course Fig2C heatshock, Reinke et
al 2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster B, Romagnolo et al 2002
Fig2a heat shock, Shen et al 2005 T1 hif-1indepen
hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated
F44E5.5 F44E5.5 P W All gene names: F44E5.5; F44E5.5.1; F44E5.5.2; 2M51;
WBGene00009692
WormBase description: Heat shock hsp70 proteins
Member of lists (Publications lists):
Custodia et al 2001 T2 heat shock,
GuhaThakurta et al 2002 T1 upregu on heat stress, Lund
et al 2002 Aging time course Fig2C heatshock, Reinke et
al 2004, list of genes in cluster order, Reinke et al
2004, list of genes in cluster B, Romagnolo et al 2002
Fig2a heat shock, Shen et al 2005 T1 hif-1indepen
hypoxia, ViswanathanM et al 2005 S2 sir-2.1 regulated
F44F4.4 F44F4.4 P W All gene names: ptr-8; F44F4.4; 2L183; CE01000;
NM_063942; WBGene00004222; WP:CE01000
WormBase description: ptr-8 encodes a member of the
Patched superfamily.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F44G3.6 F44G3.6 P W All gene names: skr-3; F44G3.6; F44G3.6.1; F44G3.6.2;
5Q603; CE16037; NM_074658; WBGene00004809; WP:CE16037
WormBase description: The skr-3 gene encodes a homolog
of Skp1 in S. cerevisiae that has no known function in
vivo, since skr-3(RNAi) animals are at least
superficially normal.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F45D3.2 F45D3.2 P W All gene names: F45D3.2; F45D3.2.1; F45D3.2.2; 5N21;
CE38517; WBGene00009722; WP:CE38517
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 Resveratrol
regulate WT, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F45F2.4 F45F2.4 P W All gene names: his-7; F45F2.4; 5J13; NM_072797;
WBGene00001881
WormBase description: his-7 encodes an H2A histone.
WormBase CDS description: histone H2A
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F45H10.4 F45H10.4 P W All gene names: drr-1; F45H10.4; 2N786; CE10548;
WBGene00009741; WP:CE10548
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al
2003 S4 genes pass two-wayANOVA P0
F45H7.4 F45H7.4 P W All gene names: prk-2; F45H7.4; F45H7.4.1; F45H7.4.2;
3E454; CE31517; NM_065295; WBGene00004183; WP:CE31517
WormBase description: serine/threonine kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F46B3.5 F46B3.5 P W All gene names: grd-2; F46B3.5; 5V83; CE34022;
NM_075576; WBGene00001691; WP:CE34022
WormBase description: grd-2 encodes a predicted
secreted protein that is similar to vertebrate desert
hedgehog (Dhh) proteins (OMIM:605423, mutated in
partial gonadal dysgenesis accompanied by
minifascicular neuropathy); by homology, GRD-2 is
predicted to be involved in cell communication, but as
loss of grd-2 activity via RNA-mediated interference
(RNAi) does not result in any obvious abnormalities,
the precise role of GRD-2 in C. elegans development
and/or behavior is not yet known; the grd-2 expression
pattern has not been reported.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B
F46C3.3 F46C3.3 P W All gene names: hum-4; F46C3.3; CE39575; NM_077513;
WBGene00002037; WP:CE39575; XM40
WormBase description: hum-4 encodes a class XII myosin,
an unconventional myosin.
WormBase CDS description: myosin like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F46C8.1 F46C8.1 P W All gene names: F46C8.1; CE04576; WBGene00018484;
WP:CE04576; XI169
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F46C8.6 F46C8.6 P W All gene names: dpy-7; F46C8.6; F46C8.6.1; F46C8.6.2;
CE04580; NM_076873; WBGene00001069; WP:CE04580; XI156
WormBase description: dpy-7 encodes a cuticular
collagen; DPY-7 functions as a structural constituent
of the extracellular cuticle whose activity is required
for normal cuticular morphology and hence, proper body
form.
WormBase CDS description: cuticle collagen
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic
induced Collag, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, IVb male soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0, Wang et al 2003 S4
LateList
F46C8.8 F46C8.8 P W All gene names: F46C8.8; CE35539; WBGene00018487;
WP:CE35539; XI170
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F46E10.9 F46E10.9 P W All gene names: dpy-11; F46E10.9; F46E10.9.1;
F46E10.9.2; F46E10.9.3; F46E10.E; 5G992; CE20819;
NM_072254; WBGene00001073; WP:CE20819
WormBase description: dpy-11 encodes a membrane-
associated thioredoxin- like (TRX) protein that affects
body shape and ray morphology; the TRX domain displays
catalytic activity in vitro, and dpy-11 is expressed in
cytoplasm of hypodermis.
WormBase CDS description: thioredoxin
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, list of genes in cluster B, Wang et al 2003
S4 Climbing, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F46F2.2 F46F2.2 P W All gene names: kin-20; F46F2.2; F46F2.2a.1;
F46F2.2a.2; F46F2.2d.1; F46F2.2d.2; CE38356; CE38358;
CE38359; CE39502; NM_078132; NM_182447; WBGene00002203;
WP:CE38356; WP:CE38358; WP:CE38359; WP:CE39502; XP888
WormBase description: casein kinase I (epsilon/delta)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
F46G11.1 F46G11.1 P W All gene names: F46G11.1; CE37646; WBGene00018514;
WP:CE37646; XG415
WormBase description: F46G11.1 is orthologous to the
human gene TRUNCATED PUTATIVE T7-LIKE MITOCHONDRIAL DNA
HELICASE (C10orf2; OMIM:606075), which when mutated
leads to disease.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
F46G11.2 F46G11.2 P W All gene names: F46G11.2; CE38520; WBGene00018515;
WP:CE38520; XG405
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F46H5.7 F46H5.7 P W All gene names: F46H5.7; F46H5.7a.1; F46H5.7a.2;
F46H5.7c.1; F46H5.7c.2; CE04593; CE31170; CE34026;
WBGene00018522; WP:CE04593; WP:CE31170; WP:CE34026;
XH858
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1
elongate lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F47B7.7 F47B7.7 P W All gene names: F47B7.7; CE35544; WBGene00018538;
WP:CE35544; XE398
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Early genes, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F47B8.5 F47B8.5 P W All gene names: F47B8.5; 5O806; CE10640;
WBGene00009806; WP:CE10640
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F48F7.1 F48F7.1 P W All gene names: alg-1; F48F7.1; CE31525; NM_077921;
WBGene00000105; WP:CE31525; XO573
WormBase description: A homolog of rde-1 that is
involved in RNA interference and affects developmental
timing along with alg-2 and dcr-1 by regulating
expression of the lin-4 and let-7 small temporal RNAs.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
F49B2.5 F49B2.5 P W All gene names: kin-22; src-2; F49B2.5; 1O919; CE24991;
NM_061101; WBGene00005078; WP:CE24991
WormBase description: Src homology domain 2, Src
homology domain 3, protein tyrosine kinase (src
subfamily)
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F49C12.14 F49C12.14 P W All gene names: F49C12.14; 4K88; CE03374;
WBGene00009883; WP:CE03374
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F49E11.2 F49E11.2 P W All gene names: F49E11.2; 4N800; CE35551;
WBGene00009889; WP:CE35551
WormBase description: adenosine receptor like protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F49E12.6 F49E12.6 P W All gene names: F49E12.6; 2I705; CE37018;
WBGene00009899; WP:CE37018
WormBase description: The F49E12.6 gene encodes a
protein with two E2F domains that may be involved in
apoptosis.
WormBase CDS description: RBB3 like protein
Member of lists (Publications lists):
Jiang et al 2001 Fig3 Rb complex
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
F49H12.5 F49H12.5 P W All gene names: F49H12.5; CE20835; WBGene00018656;
WP:CE20835; XC693
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F52B11.3 F52B11.3 P W All gene names: noah-2; phi-55; F52B11.3; F52B11.3.1;
F52B11.3.2; 4O859; CE18723; WBGene00009926; WP:CE18723
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F52D1.3 F52D1.3 P W All gene names: pqn-40; F52D1.3; CE37115; NM_075703;
WBGene00004127; WP:CE37115; XB70
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F52D10.6 F52D10.6 P W All gene names: F52D10.6; CE03392; WBGene00009932;
WP:CE03392; XM201
WormBase description: PH (pleckstrin homology) domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F52E4.6 F52E4.6 P W All gene names: wrt-2; F52E4.6; CE07273; NM_076128;
WBGene00006948; WP:CE07273; XD712
WormBase description: wrt-2 encodes a (potentially
secreted) protein, expressed in seam cells and
hypodermal syncytia, with similarity to the
carboxy-terminal autoprocessing domain of Drosophila
hedgehog; WRT-2 also contains a
glutamine/asparagine-rich domain.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt herm enriched
gen, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0, Wang et al 2003 S4
LateList
F52H2.3 F52H2.3 P W All gene names: F52H2.3; CE10868; WBGene00018715;
WP:CE10868; XD156
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B
F52H3.1 F52H3.1 P W All gene names: let-268; F52H3.1; F52H3.1.1; F52H3.1.2;
F52H3.1.3; 2K324; CE03397; NM_063769; WBGene00002497;
WP:CE03397
WormBase description: let-268 encodes a procollagen
lysyl hydroxylase that processes type IV collagen, a
collagen secreted and incorporated into the basement
membrane during embryogenesis (and encoded partly by
emb-9); LET-268 activity is essential for type IV
collagen processing and secretion and for the
stability, but not the formation of, the basement
membrane that provides mechanical support to body wall
muscle once contraction begins; LET-268 also appears to
be required for pharyngeal muscle contraction.
WormBase CDS description:
procollagen-lysine,2-oxoglutarate 5-dioxygenase
precusor
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F53B1.4 F53B1.4 P W All gene names: F53B1.4; CE04644; WBGene00018737;
WP:CE04644; XC730
WormBase description: thymidine diphosphoglucose
4,6-dehydratase
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F53B1.5 F53B1.5 P W All gene names: F53B1.5; WBGene00043352
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F53B3.6 F53B3.6 P W All gene names: F53B3.6; CE04446; WBGene00018744;
WP:CE04446; XD483
WormBase description: zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F53G12.3 F53G12.3 P W All gene names: F53G12.3; 1A615; CE24999;
WBGene00018771; WP:CE24999
WormBase description: F53G12.3 encodes a large partial
homolog of dual oxidase ('Ce-Duox2'), with an
N-terminal peroxidase domain, two central
calmodulin-binding EF hands, and a C-terminal
superoxide-generating NADPH-oxidase domain; F53G12.3
may be required for dityrosine cross-linking of
collagen, and thus for cuticular integrity; F53G12.3
may use cytosolic NADPH to generate reactive oxygen,
which then may drive the peroxidase ectodomain to
cross-link free tyrosine in collagen; F53G12.3 has no
visible expression pattern detectable by antibodies,
implying very low or rare expression.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F53H4.5 F53H4.5 P W All gene names: F53H4.5; CE35554; WBGene00010010;
WP:CE35554; XQ501
WormBase description: SAND domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F54A5.1 F54A5.1 P W All gene names: F54A5.1; F54A5.1.1; F54A5.1.2; F54A5.E;
1B465; CE20859; WBGene00018786; WP:CE20859
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, GO categories, Reinke et al 2004, list of
genes in cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003
S4 Early genes, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F54C9.1 F54C9.1 P W All gene names: iff-2; F54C9.1; F54C9.1.1; F54C9.1.2;
F54C9.1.3; 2I850; CE02249; NM_063406; WBGene00002065;
WP:CE02249
WormBase description: initiation factor 5A
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
F54F2.1 F54F2.1 P W All gene names: F54F2.1; 3J913; CE00194; NM_066547;
WBGene00018832; WP:CE00194
WormBase description: Vitronectin receptor alpha
subunit
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F55A12.4 F55A12.4 P W All gene names: dhs-2; F55A12.4; 1F923; CE11123;
CE26924; CE33397; NM_059174; NM_182014; NM_182015;
WBGene00000966; WP:CE11123; WP:CE26924; WP:CE33397
WormBase description: dhs-2 encodes a short-chain
dehydrogenase predicted to be mitochondrial.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F55A4.8 F55A4.8 P W All gene names: F55A4.8; F55A4.8c.1; F55A4.8c.2;
CE19463; CE31182; CE31183; WBGene00018860; WP:CE19463;
WP:CE31182; WP:CE31183; XB658
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F55D10.2 F55D10.2 P W All gene names: rpl-25.1; F55D10.2; F55D10.2.1;
F55D10.2.2; CE02777; NM_076407; WBGene00004438;
WP:CE02777; XF335
WormBase description: rpl-25.1 encodes a large
ribosomal subunit L23a protein.
WormBase CDS description: Ribosomal protein L23
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F55D12.2 F55D12.2 P W All gene names: F55D12.2; 1I469; CE32439;
WBGene00010111; WP:CE32439
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F55E10.6 F55E10.6 P W All gene names: F55E10.6; CE02786; WBGene00018885;
WP:CE02786; XI964
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
WormBase CDS description: D-beta-hydroxybutyrate
dehydrogenase (BDH)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F55F8.1 F55F8.1 P W All gene names: ptr-10; F55F8.1; F55F8.1.1; F55F8.1.2;
1G233; CE36938; NM_059257; WBGene00004224; WP:CE36938
WormBase description: ptr-10 encodes a member of the
Patched superfamily.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F55H12.4 F55H12.4 P W All gene names: F55H12.4; 1J468; CE11212;
WBGene00010135; WP:CE11212
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F56C11.1 F56C11.1 P W All gene names: bli-3; tag-31; F56C11.1; 1A620;
CE28463; NM_058285; WBGene00000253; WP:CE28463
WormBase description: bli-3 encodes a large homolog of
dual oxidase ('Ce-Duox1'), with an N-terminal
peroxidase domain, two central calmodulin-binding EF
hands, and a C-terminal superoxide-generating
NADPH-oxidase domain; BLI-3 is required for dityrosine
cross-linking of collagen, and thus for cuticular
integrity; BLI-3 is thought to use cytosolic NADPH to
generate reactive oxygen, which then drives the
peroxidase ectodomain to cross-link free tyrosine in
collagen; BLI-3 is expressed exclusively in hypodermal
cells at low levels, with peaks of expression
corresponding to collagen/cuticle biosynthesis.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F56C11.2 F56C11.2 P W All gene names: ptr-11; F56C11.2; 1A634; CE17902;
NM_058286; WBGene00004225; WP:CE17902
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
F56D12.2 F56D12.2 P W All gene names: F56D12.2; NM_061551; WBGene00043374
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F56D3.1 F56D3.1 P W All gene names: F56D3.1; F56D3.1.1; F56D3.1.2;
F56D3.1.3; 2E439; CE29410; WBGene00018969; WP:CE29410
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Reinke et al 2004, IVb male soma enriched
genes, ViswanathanM et al 2005 S2 sir-2.1 regulated,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
F56D6.1 F56D6.1 P W All gene names: clec-68; F56D6.1; 4E693; CE39162;
WBGene00018970; WP:CE39162
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
F56D6.2 F56D6.2 P W All gene names: clec-67; F56D6.2; 4E687; CE31546;
WBGene00018971; WP:CE31546
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten
lifespan, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
F56H1.1 F56H1.1 P W All gene names: che-14; ptd-1; F56H1.1; 1G329; CE28468;
NM_059272; WBGene00000493; WP:CE28468
WormBase description: che-14 encodes a protein with a
sterol-sensing domain; CHE-14 protein is involved in
the exocytotic secretion of lipid-modified proteins at
the apical surface of certain epithelial cells.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F57B9.9 F57B9.9 P W All gene names: pqn-46; F57B9.9; 3I32; CE33114;
NM_066114; WBGene00004133; WP:CE33114
WormBase description: The protein product of this gene
is predicted to contain a glutamine/asparagine
(Q/N)-rich ('prion') domain, by the algorithm of
Michelitsch and Weissman (as of the WS77 release of
WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F57C12.1 F57C12.1 P W All gene names: nas-38; F57C12.1; CE31188; NM_075719;
WBGene00003554; WP:CE31188; XB181
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F57C12.4 F57C12.4 P W All gene names: mrp-2; F57C12.4; CE26370; NM_075720;
WBGene00003408; WP:CE26370; XB184
WormBase description: mrp-2 encodes a predicted
multidomain transmembrane protein that is a member of
the ATP-binding cassette (ABC) superfamily of transport
proteins and is homologous to the human multidrug
resistance-associated protein 1 (MRP1, OMIM:158343); by
homology, MRP-2 is predicted to function as a membrane
pump that couples the energy of ATP hydrolysis to
membrane transport; as loss of MRP-2 function via
RNA-mediated interference (RNAi) does not result in any
abnormalities, the precise role of MRP-2 in C. elegans
development and/or behavior is not yet known; mrp-2
expression is, however, upregulated early in the exit
from the alternative dauer stage and then remains
induced, suggesting that MRP-2 activity is required for
the transition to, and maintenance of, a more active
metabolic state.
WormBase CDS description: ATP-binding transport family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Early genes, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
F58A4.11 F58A4.11 P W All gene names: gei-13; F58A4.11; 3K722; CE00217;
NM_066733; WBGene00001570; WP:CE00217
WormBase description: gei-13 encodes a protein, with a
BED finger domain (predicted to be DNA-binding) and a
glutamine/asparagine-rich domain; GEI-13 physically
interacts with GEX-3, and is required for normal body
shape, cuticle synthesis, and locomotion.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F58A6.4 F58A6.4 P W All gene names: nas-29; F58A6.4; 2F424; CE39943;
NM_062552; WBGene00003547; WP:CE39943
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Proteases, Wang
et al 2003 S3 genes pass one-way ANOVA, Wang et al
2003 S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
F58G1.5 F58G1.5 P W All gene names: F58G1.5; 2N224; CE17925;
WBGene00010267; WP:CE17925
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F58G4.1 F58G4.1 P W All gene names: F58G4.1; 5I597; CE07306;
WBGene00019064; WP:CE07306
WormBase description: myosin
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F58H12.1 F58H12.1 P W All gene names: kin-29; sma-11; sns-8; F58H12.1;
CE28479; NM_076092; WBGene00002210; WP:CE28479; XD464
WormBase description: kin-29 encodes a serine/threonine
kinase with significant homology in the kinase domain
to the AMP-activated protein kinase (AMPK) and SNF1
kinases; the AMP-kinase cascade is activated by
cellular stresses that deplete ATP; AMP-kinase is
believed to protect the mammalian cell by 'switching
off' ATP-consuming pathways like fatty acid synthesis,
by phosphorylating key regulatory enzymes, and
switching on alternative pathways for ATP generation;
kin-29 is involved in regulating the expression of
chemosensory receptors and entry into the daur pathway;
kin-29 also affects body size via interaction with the
Sma/Mab pathway and lifespan, with mutants exhibiting a
smaller body size and increased life span; a functional
KIN-29-GFP fusion protein is expressed in sensory
neurons and many other cell types, and localizes to the
cytoplasm; under conditions of cellular stress like
heat shock and starvation, KIN-29-GFP translocates to
the nucleus.
WormBase CDS description: serine/threonine-protein
kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
F59A3.1 F59A3.1 P W All gene names: F59A3.1; 1G97; CE30548; WBGene00019074;
WP:CE30548
WormBase description: carboxypeptidase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F59B10.1 F59B10.1 P W All gene names: pqn-47; F59B10.1; 2K788; CE36940;
NM_063861; WBGene00004134; WP:CE36940
WormBase description: pqn-47 encodes a protein with a
glutamine/asparagine-rich domain, homologous to human
C11orf9 and Drosophila CG3328, that is required for
locomotion, vulval development, full body size,
cuticular integrity, and general health in mass RNAi
assays; pqn-47(cxP5915) homozygotes are sluggish.
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
F59B10.3 F59B10.3 P W All gene names: F59B10.3; 2K803; CE35884;
WBGene00010319; WP:CE35884
WormBase description: cadherin transmembranous domain
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S7 SAGE genes in the dataset, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S8 SAGE genes in the
dauer exit, Wang et al 2003 S4 genes pass two-wayANOVA
P0
F59B10.5 F59B10.5 P W All gene names: F59B10.5; 2K810; CE01594;
WBGene00010321; WP:CE01594
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
F59C6.8 F59C6.8 P W All gene names: F59C6.8; 1L87; CE37526; WBGene00010327;
WP:CE37526
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, mixed sperm soma,
Reinke et al 2004, fem3 enriched genes, Reinke et al
2004, list of genes in cluster B, ViswanathanM et al
2005 S2 sir-2.1 regulated
F59D12.2 F59D12.2 P W All gene names: F59D12.2; CE35566; WBGene00010330;
WP:CE35566; XQ292
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
F59D12.4 F59D12.4 P W All gene names: gpn-1; F59D12.4; CE26816; NM_078181;
WBGene00001687; WP:CE26816; XQ301
WormBase description: gpn-1 encodes a glypican, a
heparan sulfate proteoglycan anchored to the cell
membrane by a GPI linkage, that is orthologous to
Drosophila Dally-like (Dlp) and mammalian glypicans
(OMIM:312870, mutated in Simpson-Golabi-Behmel
overgrowth syndrome); by homology, GPN-1 is predicted
to function as a cell surface protein that regulates
intercellular signaling, perhaps within the context of
cell division and growth regulation; however, as loss
of gpn-1 activity via large-scale RNAi screens does not
result in any obvious abnormalities, the precise role
of GPN-1 in C. elegans development and/or behavior is
not yet known.
WormBase CDS description: glypican
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
F59F5.6 F59F5.6 P W All gene names: syd-2; F59F5.6; CE03447; NM_077367;
WBGene00006364; WP:CE03447; XL168
WormBase description: syd-2 encodes alpha-liprin, a
member of the liprin family of proteins that interact
with LAR (leukocyte common antigen related)-type
receptor tyrosine phosphatases (RPTPs) to facilitate
clustering of RPTPs to focal adhesions; SYD-2 is
required for establishing normal presynaptic density,
and is expressed in all neurons and muscles; SYD-2 is
required cell autonomously in neurons for
differentiation of presynaptic active zones, where
SYD-2 is localized.
WormBase CDS description: liprin-alpha
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Roy et al 2002 S3 muscle genes
H03A11.2 H03A11.2 P W All gene names: H03A11.2; CE32684; WBGene00010357;
WP:CE32684; XP846
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt male enriched
gen, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
H03E18.1 H03E18.1 P W All gene names: H03E18.1; CE37653; WBGene00019148;
WP:CE37653; XJ131
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
H08M01.2 H08M01.2 P W All gene names: H08M01.2; 4O597; CE36175; CE36176;
WBGene00010374; WP:CE36175; WP:CE36176
WormBase description: GTPase-activator protein for
Rho-like GTPases
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
H10E21.5 H10E21.5 P W All gene names: H10E21.5; 3A638; CE19490;
WBGene00019185; WP:CE19490
WormBase description: zinc finger protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
H13N06.2 H13N06.2 P W All gene names: H13N06.2; CE35570; WBGene00010396;
WP:CE35570; XQ109
WormBase description: von Willebrand factor type A
domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
H14E04.1 H14E04.1 P W All gene names: H14E04.1; H14E04.F; 3D495; CE29973;
WBGene00019198; WP:CE29973
WormBase description: This gene encodes a protein
predicted by Eisenberg and coworkers, with 52%
accuracy, to be mitochondrial.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B
H22K11.4 H22K11.4 P W All gene names: H22K11.4; CE37119; WBGene00019227;
WP:CE37119; XH406
WormBase description: H22K11.4 is orthologous to the
human gene SARCOGLYCAN, ALPHA (50KD
DYSTROPHIN-ASSOCIATED GLYCOPROTEIN) (SGCA;
OMIM:600119), which when mutated leads to disease.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
H23N18.5 H23N18.5 P W All gene names: H23N18.5; H23N18.A; 5F386; CE20987;
WBGene00019236; WP:CE20987
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
H32C10.2 H32C10.2 P W All gene names: H32C10.2; 4G697; CE21004;
WBGene00019256; WP:CE21004
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
H42K12.3 H42K12.3 P W All gene names: H42K12.3; H42K12.3.1; H42K12.3.2;
CE11614; WBGene00019272; WP:CE11614; XB933
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S3 genes pass one-way ANOVA, Wang et
al 2003 S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
K01A2.5 K01A2.5 P W All gene names: K01A2.5; 2A593; CE19513;
WBGene00019280; WP:CE19513
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Murphy et al 2003 Fig2 Class2
shorten lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
K01B6.1 K01B6.1 P W All gene names: fozi-1; K01B6.1; 3K385; CE00238;
NM_066646; WBGene00010453; WP:CE00238
WormBase description: K01B6.1 encodes a protein with a
zinc-finger domain, a formin homology 2 domain, and a
glutamine/asparagine-rich domain; it is dispensable, in
RNAi assays, for viability and gross anatomy.
WormBase CDS description: Zinc-finger motif C2H2 type
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
K01D12.5 K01D12.5 P W All gene names: K01D12.5; 5M879; CE34198;
WBGene00010464; WP:CE34198
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
K02E10.4 K02E10.4 P W All gene names: K02E10.4; CE30083; CE37250;
WBGene00019318; WP:CE30083; WP:CE37250; XD105
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
K02E10.7 K02E10.7 P W All gene names: K02E10.7; CE31194; WBGene00019321;
WP:CE31194; XD120
WormBase description: protein kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
K02G10.5 K02G10.5 P W All gene names: K02G10.5; CE04705; WBGene00019346;
WP:CE04705; XF308
WormBase description: zinc-finger DNA-binding protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
K03E6.6 K03E6.6 P W All gene names: pfn-3; K03E6.6; CE07332; NM_075804;
WBGene00003991; WP:CE07332; XB698
WormBase description: Profilin
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed sperm soma, Reinke et
al 2004, fem3 enriched genes, Reinke et al 2004, list
of genes in cluster B
K04A8.6 K04A8.6 P W All gene names: F46E10.A; K04A8.6; 5H14; CE27388;
WBGene00019377; WP:CE27388
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
K05F1.10 K05F1.10 P W All gene names: K05F1.10; 2G92; CE02805;
WBGene00019411; WP:CE02805
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
K08B12.1 K08B12.1 P W All gene names: K08B12.1; 5G741; CE35337;
WBGene00019520; WP:CE35337
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
K08E3.1 K08E3.1 P W All gene names: tyr-2; K08E3.1; 3O835; CE18864;
NM_067435; WBGene00010661; WP:CE18864
WormBase description: tyrosinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Shen et al 2005 T1 hif-1 depend hypoxia
K09B3.1 K09B3.1 P W All gene names: K09B3.1; 4E561; CE31560;
WBGene00019545; WP:CE31560
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
K09C8.1 K09C8.1 P W All gene names: nhx-7; pbo-4; K09C8.1; CE31034;
NM_077429; WBGene00003943; WP:CE31034; XL575
WormBase description: pbo-4 encodes a sodium/proton
exchanger (also known as nhx-7), with a potential
Ca[2+]/calmodulin binding domain in its C-terminal
cytosolic region that could mediate calcium signaling;
PBO-4 is expressed in the basolateral membrane of
posterior intestinal cells; PBO-4 is required for
normal posterior body muscle contraction (pBoc) during
the defecation cycle; PBO-4 is thought to prevent
intracellular acidification by catalysing the
electroneutral exchange of extracellular sodium for an
intracellular proton; specifically, PBO-4 may enable
intercellular signals from intestinal cells (by
secreting protons which then might activate PBO-5 in
adjacent muscle cells).
WormBase CDS description: Na(+)/H(+) exchanger
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
K10B4.3 K10B4.3 P W All gene names: K10B4.3; 2A406; CE35995;
WBGene00019615; WP:CE35995
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
K10H10.4 K10H10.4 P W All gene names: K10H10.4; 2O787; CE16254;
WBGene00010760; WP:CE16254
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Shen et al 2005 T1 hif-1 depend hypoxia,
ViswanathanM et al 2005 S2 sir-2.1 regulated
K11D12.10 K11D12.10 P W All gene names: mlk-1; K11D12.10; 5F536; CE30383;
CE30384; NM_171456; NM_171928; WBGene00003374;
WP:CE30383; WP:CE30384
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B
K11D12.4 K11D12.4 P W All gene names: cpt-4; K11D12.4; 5F502; CE12132;
WBGene00019644; WP:CE12132
WormBase description: acetyltransferase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
K11G12.5 K11G12.5 P W All gene names: K11G12.5; CE02827; WBGene00019656;
WP:CE02827; XH342
WormBase description: mitochondrial 2-oxoglutartae
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S4 Climbing, Wang et al 2003 S3 genes pass
one-way ANOVA, Wang et al 2003 S4 genes pass
two-wayANOVA P0
M01E10.2 M01E10.2 P W All gene names: M01E10.2; 3D126; CE19534;
WBGene00019708; WP:CE19534
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
M01F1.7 M01F1.7 P W All gene names: M01F1.7; 3E612; CE33673;
WBGene00010813; WP:CE33673
WormBase description: M01F1.7 encodes a
phosphatidylinositol transfer protein, with a
C-terminal DDHD domain, that is orthologous to RETINAL
DEGENERATION B (RDGB) in D. melanogaster, as well as
other orthologs in mammals (NIR1-3); M01F1.7 is
expressed in the egg membrane, the germline, the
spermatheca and three pairs of head neurons; while
M01F1.7 would be expected to mediate PIP(2) signalling
in either neuronal function or cytokinesis, it has not
yet had a published mutant phenotype, and has no
obvious function in mass RNAi assays.
WormBase CDS description: RETINAL DEGENERATION B
PROTEIN (PROBABLE CALCIUM TRANSPORTER RDGB)
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes
P<0.05, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, herm soma enriched genes,
Reinke et al 2004, GO categories, Reinke et al 2004,
list of genes in cluster B, Wang et al 2003 S8 SAGE
genes in the dauer exit, Wang et al 2003 S7 SAGE genes
in the dataset
M03B6.3 M03B6.3 P W All gene names: M03B6.3; CE23873; WBGene00010835;
WP:CE23873; XO480
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
M03F4.6 M03F4.6 P W All gene names: phi-61; M03F4.6; CE28621;
WBGene00019759; WP:CE28621; XF584
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
M03F8.1 M03F8.1 P W All gene names: M03F8.1; 5G433; CE12372;
WBGene00019761; WP:CE12372
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
M04C3.1 M04C3.1 P W All gene names: M04C3.1; 5T912; CE18078; CE31972;
WBGene00010850; WP:CE18078; WP:CE31972
Member of lists (Publications lists):
Bishop et al 2004 T4 57 vhl-1 depend
hif-1 indep, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B
M04C3.2 M04C3.2 P W All gene names: M04C3.2; 5T920; CE31973;
WBGene00010851; WP:CE31973
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B
M04C3.3 M04C3.3 P W All gene names: M04C3.3; CE18080; WBGene00010852;
WP:CE18080
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B
M04G7.3 M04G7.3 P W All gene names: M04G7.3; M04G7.3b.1; M04G7.3b.2; 4B214;
CE17192; CE28624; WBGene00019774; WP:CE17192;
WP:CE28624
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Shen et al 2005 T1 hif-1indepen hypoxia
M153.1 M153.1 P W All gene names: M153.1; CE03511; WBGene00010924;
WP:CE03511; XM767
WormBase description: pyrroline-5-carboxylate reductase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, wt herm vs wt herm enriched
gen, Reinke et al 2004, list of genes in cluster B,
Romagnolo et al 2002 Fig3b Metabolism, Wang et al 2003
S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0, Wang et al 2003 S4
LateList
M153.3 M153.3 P W All gene names: M153.3; CE03513; WBGene00010926;
WP:CE03513; XM765
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
M28.8 M28.8 P W All gene names: M28.8; 2K923; CE02286; WBGene00010899;
WP:CE02286
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
PDB1.1 PDB1.1 P W All gene names: PDB1.1; CE31209; CE39603; CE39604;
NM_076878; WBGene00019803; WP:CE31209; WP:CE39603;
WP:CE39604; XI176
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class1
elongate lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
R01E6.2 R01E6.2 P W All gene names: R01E6.2; CE35593; WBGene00010968;
WP:CE35593; XO180
Member of lists (Publications lists):
Bishop et al 2004 T4 57 vhl-1 depend
hif-1 indep, Jones et al 2001 Non dauer genes P<0.05,
Reinke et al 2004, list of genes in cluster order,
Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
R01H2.5 R01H2.5 P W All gene names: R01H2.5; 3I150; CE00804;
WBGene00019813; WP:CE00804
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
R02C2.4 R02C2.4 P W All gene names: nhr-204; R02C2.4; 5A732; CE32202;
WBGene00019816; WP:CE32202
WormBase description: nuclear hormone receptor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
R02F11.1 R02F11.1 P W All gene names: R02F11.1; 5F281; CE12496;
WBGene00019839; WP:CE12496
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
R02F11.3 R02F11.3 P W All gene names: R02F11.3; 5F280; CE36883; CE37658;
WBGene00019841; WP:CE36883; WP:CE37658
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
R05D3.9 R05D3.9 P W All gene names: R05D3.9; 3J452; CE31049;
WBGene00019882; WP:CE31049
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
R05G6.9 R05G6.9 P W All gene names: R05G6.9; 4I278; CE35359;
WBGene00019901; WP:CE35359
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
R05H10.6 R05H10.6 P W All gene names: cdh-7; R05H10.6; 2P135; CE38092;
NM_064674; WBGene00000399; WP:CE38092
WormBase description: cdh-7 encodes a protein that
contains a cadherin domain.
WormBase CDS description: Cadherin (3 domains)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
R06C1.4 R06C1.4 P W All gene names: R06C1.4; 1M523; CE18119;
WBGene00011059; WP:CE18119
WormBase description: RNA recognition motif. (aka RRM,
RBD, or RNP domain)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S5 genes common to feeding
ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
R07B1.7 R07B1.7 P W All gene names: R07B1.7; CE01633; WBGene00011079;
WP:CE01633; XK487
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B
R07B7.11 R07B7.11 P W All gene names: gana-1; R07B7.11; 5M569; CE06273;
NM_073630; WBGene00011095; WP:CE06273
WormBase description: R07B7.11 is orthologous to the
human gene ALPHA-GALACTOSIDASE B (GALB; OMIM:104170),
which when mutated leads to Schindler disease, Kanzaki
disease, or NAGA deficiency.
WormBase CDS description:
alpha-N-acetylgalactosaminidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Metabolism,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S5 genes common to feeding ANOVA, Wang et al
2003 S3 genes pass one-way ANOVA
R07C12.2 R07C12.2 P W All gene names: R07C12.2; 4E913; CE33679;
WBGene00019932; WP:CE33679
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
R07E3.1 R07E3.1 P W All gene names: R07E3.1; R07E3.1a.1; R07E3.1a.2;
R07E3.1b.1; R07E3.1b.2; CE02295; CE39608;
WBGene00011102; WP:CE02295; WP:CE39608; XK958
WormBase description: cysteine proteinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 Early genes, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
R07E3.6 R07E3.6 P W All gene names: R07E3.6; CE02300; WBGene00011107;
WP:CE02300; XK939
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
R07E4.4 R07E4.4 P W All gene names: mig-23; R07E4.4; R07E4.4.1; R07E4.4.2;
CE28748; NM_076593; WBGene00003254; WP:CE28748; XG566
WormBase description: guanosine-diphosphatase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
R07G3.6 R07G3.6 P W All gene names: R07G3.6; 2H894; CE02025;
WBGene00019942; WP:CE02025
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
R08D7.7 R08D7.7 P W All gene names: R08D7.7; 3K85; CE01048; WBGene00011147;
WP:CE01048
WormBase description: Carbohydrate kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
R09B5.8 R09B5.8 P W All gene names: cnc-3; R09B5.8; 5B927; CE12632;
NM_071016; WBGene00000557; WP:CE12632
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, IVb male soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 Climbing, Wang et al 2003 S4 genes pass
two-wayANOVA P0
R09F10.1 R09F10.1 P W All gene names: R09F10.1; CE28755; WBGene00019986;
WP:CE28755; XI943
WormBase description: peptidase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B
R09F10.4 R09F10.4 P W All gene names: inx-5; opu-5; R09F10.4; CE33811;
NM_077002; WBGene00002127; WP:CE33811; XI916
WormBase description: inx-5 encodes a predicted member
of the innexin family; expressed in the embryonic
hypodermis, developing vulva, seam cells, and
spermatheca.
WormBase CDS description: unc-7-like protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Transporters,
Wang et al 2003 S4 Early genes, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
R107.8 R107.8 P W All gene names: lin-12; R107.8; 3K150; CE00274;
NM_066606; WBGene00003001; WP:CE00274
WormBase description: The lin-12 gene encodes a member
of the Notch/LIN-12/glp-1 transmembrane receptor family
that affects cell fate specification events during
development, notably including the anchor cell,
secondary vulval precursor cells, and the embryonic
ABplp lineage; its expression is dynamic, including
Z1.ppp and Z4.aaa, ABplaa descendants, ABplpa
descendants, and the intestinal primordium.
WormBase CDS description: LIN-12 protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Murphy et al 2003 Fig2 Class2
shorten lifespan, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
R10E8.2 R10E8.2 P W All gene names: R10E8.2; 5S735; CE36449;
WBGene00011208; WP:CE36449
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S4 TransientList, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
R10E8.3 R10E8.3 P W All gene names: R10E8.3; 5S714; CE18911;
WBGene00011209; WP:CE18911
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B
R11A5.7 R11A5.7 P W All gene names: R11A5.7; R11A5.7.1; R11A5.7.2; 1I448;
CE32478; WBGene00011235; WP:CE32478
WormBase description: zinc carboxypeptidase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
R11D1.11 R11D1.11 P W All gene names: dhs-21; R11D1.11; 5N212; CE39954;
NM_073781; WBGene00000984; WP:CE39954
WormBase description: dhs-21 encodes a member of the
short-chain dehydrogenases/reductases family (SDR)
expressed in the intestine, hypodermis, uterus, and
spermatheca.
WormBase CDS description: Mouse adipocyte P27 protein
like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
R11E3.4 R11E3.4 P W All gene names: R11E3.4; 4F536; CE19546;
WBGene00020006; WP:CE19546
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched
genes, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, mixed oogenesis soma, Reinke
et al 2004, list of genes in cluster B, ViswanathanM et
al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4
Early genes, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
R11G1.4 R11G1.4 P W All gene names: sax-1; R11G1.4; R11G1.4a.1; R11G1.4a.2;
CE39615; CE39616; NM_076226; WBGene00004727;
WP:CE39615; WP:CE39616; XE264
WormBase description: The sax-1 gene encodes a homolog
of Ndr kinase that regulates neuronal cell shape and
neurite initiation.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated,
ViswanathanM et al 2005 S2 daf-16 Resveratrol
R11G11.12 R11G11.12 P W All gene names: nhr-210; R11G11.12; 5A990; CE12762;
WBGene00020015; WP:CE12762
WormBase description: zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, GO categories, Reinke
et al 2004, herm soma enriched genes, Reinke et al
2004, list of genes in cluster B, ViswanathanM et al
2005 S2 sir-2.1 regulated
R11G11.2 R11G11.2 P W All gene names: nhr-58; R11G11.2; 5B11; CE12742;
CE33298; NM_070835; WBGene00003648; WP:CE12742;
WP:CE33298
WormBase description: zinc finger protein
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S4 TransientList, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
R11G11.6 R11G11.6 P W All gene names: R11G11.6; 5A981; CE12750;
WBGene00020014; WP:CE12750
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol
R12E2.9 R12E2.9 P W All gene names: inx-15; opu-15; R12E2.9; 1E728;
CE18141; NM_058912; WBGene00002137; WP:CE18141
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
R13A1.8 R13A1.8 P W All gene names: R13A1.8; 4H982; CE04843;
WBGene00020045; WP:CE04843
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, GO categories, Reinke
et al 2004, list of genes in cluster B, Reinke et al
2004, IVb male soma enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2
daf-16 Resveratrol
R148.5 R148.5 P W All gene names: R148.5; 3E259; CE31583; CE32711;
WBGene00020104; WP:CE31583; WP:CE32711
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated
R186.6 R186.6 P W All gene names: R186.6; 5N438; CE20030; WBGene00011307;
WP:CE20030
WormBase description: Rhodanese-like domain
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
R74.2 R74.2 P W All gene names: R74.2; 3F279; CE23931; WBGene00011278;
WP:CE23931
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
T01B7.7 T01B7.7 P W All gene names: rol-6; T01B7.7; 2J23; CE03591;
NM_063457; WBGene00004397; WP:CE03591
WormBase description: The rol-6 gene encodes a cuticle
collagen related to human collagen alpha 1 (III) chain
precursor (OMIM:120180), and is required for normal
cuticular morphology; ROL-6 interacts with SQT-1, a
closely related cuticle collagen, and is expressed at
all stages from L2 to adult with transcripts detected
at each of the molts preceding these stages.
WormBase CDS description: cuticle collagen ROL-6
Member of lists (Publications lists):
ReichertK et al 2005 T2 xenobiotic
induced Collag, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0,
Wang et al 2003 S4 LateList
T01B7.8 T01B7.8 P W All gene names: T01B7.8; 2J24; CE03592; WBGene00011313;
WP:CE03592
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
T01C8.5 T01C8.5 P W All gene names: T01C8.5; CE07462; WBGene00020146;
WP:CE07462; XR406
WormBase description: aminotransferase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved
w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/
Drosoph, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
Wang et al 2003 S4 Climbing, Wang et al 2003 S3
genes pass one-way ANOVA, Wang et al 2003 S4 genes
pass two-wayANOVA P0
T01G6.9 T01G6.9 P W All gene names: str-256; T01G6.9; 5A976; CE25978;
NM_070822; WBGene00006282; WP:CE25978
WormBase description: 7TM chemoreceptor, str family
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
T02D1.6 T02D1.6 P W All gene names: T02D1.6; 4S352; CE30684;
WBGene00011372; WP:CE30684
WormBase description: 7 transmembrane receptor
(rhodopsin family)
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, GO categories, Reinke
et al 2004, list of genes in cluster B, Reinke et al
2004, IVb male soma enriched genes, ViswanathanM et al
2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2
daf-16 Resveratrol
T02E9.2 T02E9.2 P W All gene names: grl-7; T02E9.2; T02E9.2a.1; T02E9.2a.2;
5L826; CE13064; CE38539; NM_073481; WBGene00001716;
WP:CE13064; WP:CE38539
Member of lists (Publications lists):
Bishop et al 2004 T4 57 vhl-1 depend
hif-1 indep, Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
T03D8.6 T03D8.6 P W All gene names: T03D8.6; 5V288; CE37271;
WBGene00011393; WP:CE37271
WormBase description: Gamma-glutamyltranspeptidase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4
conserved w/ Drosoph, Reinke et al 2004, list of genes
in cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Climbing, Wang et al
2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4
genes pass two-wayANOVA P0
T03F7.7 T03F7.7 P W All gene names: T03F7.7; 5L793; CE20032; CE32484;
WBGene00011404; WP:CE20032; WP:CE32484
WormBase description: Candida SEC14 cytosolic factor
like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt male
enriched gen, Reinke et al 2004, herm soma enriched
genes, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated
T04B2.3 T04B2.3 P W All gene names: T04B2.3; 4K813; CE23944;
WBGene00011422; WP:CE23944
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Romagnolo et al 2002 Fig3b Unkown,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Zhang et
al 2002, T1 mec-3 dependent genes
T04H1.6 T04H1.6 P W All gene names: egf-5; lrx-1; T04H1.6; 5M735; CE38413;
NM_073671; WBGene00003075; WP:CE38413
WormBase description: lrx-1 encodes a protein that
contains four class A low-density lipoprotein receptor
domains.
WormBase CDS description: low-density lipoprotein
receptor
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 daf-16
Resveratrol
T05B11.1 T05B11.1 P W All gene names: T05B11.1; 5I231; CE07464;
WBGene00020245; WP:CE07464
WormBase description: This gene encodes a protein
containing an F-box, a motif predicted to mediate
protein-protein interactions either with homologs of
yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, wt herm vs wt herm
enriched gen, Reinke et al 2004, list of genes in
cluster B
T05B4.9 T05B4.9 P W All gene names: T05B4.9; 5E586; CE13209;
WBGene00020240; WP:CE13209
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B
T05C1.3 T05C1.3 P W All gene names: T05C1.3; 2E776; CE02861;
WBGene00020250; WP:CE02861
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, Wang et al 2003 S3 genes pass one-way
ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003
S4 genes pass two-wayANOVA P0
T05C12.10 T05C12.10 P W All gene names: qua-1; T05C12.10; 2I493; CE34989; M110;
NM_063324; WBGene00004264; WP:CE34989
WormBase description: hedgehog-like protein
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes
P<0.05, Reinke et al 2004, list of genes in cluster
order, Reinke et al 2004, list of genes in cluster B,
ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 LateList, Wang et al 2003 S4 genes pass
two-wayANOVA P0
T05D4.4 T05D4.4 P W All gene names: T05D4.4; 3O667; CE34087;
WBGene00011477; WP:CE34087
Member of lists (Publications lists):
Reinke et al 2004, list of genes in
cluster order, Reinke et al 2004, list of genes in
cluster B, ViswanathanM et al 2005 S2 sir-2.1
regulated, ViswanathanM et al 2005 S2 daf-16
Resveratrol, Wang et al 2003 S4 Early genes, Wang et
al 2003 S3 genes pass one-way ANOVA, Wang et al 2003
S4 genes pass two-wayANOVA P0
T05E7.1 T05E7.1 P W All gene names: T05E7.1; 1G781; CE13231;
WBGen
