Baugh et al 2003, class MDE, 639 genes

Gene list file name:Baugh2003_classMDE.txt
Type of gene identifier:Affymetrix custom chip
Description:Baugh et al 2005, Supplymental Dataset, class MDE  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AFF_C23H3.4 Aff_C23H3.4 P W
AFF_C25H3.3 Aff_C25H3.3 P W
AFF_C33A11.2 Aff_C33A11.2 P W
AFF_C35D10.1 Aff_C35D10.1 P W
AFF_E01A2.I Aff_E01A2.I P W
AFF_F09E5.4 Aff_F09E5.4 P W
AFF_F21H12.1 Aff_F21H12.1 P W
AFF_F28B3.6 Aff_F28B3.6 P W
AFF_F44A2.6 Aff_F44A2.6 P W
AFF_F44B9.8 Aff_F44B9.8 P W
AFF_F49H12.D Aff_F49H12.D P W
AFF_F53C3.9 Aff_F53C3.9 P W
AFF_R07E5.12 Aff_R07E5.12 P W
AFF_R11D1.9 Aff_R11D1.9 P W
AFF_R144.3 Aff_R144.3 P W
AFF_T08B2.9 Aff_T08B2.9 P W
AFF_Y105E8A.L Aff_Y105E8A.L P W
AFF_Y113G7A.I Aff_Y113G7A.I P W
AFF_Y116A8A.LL Aff_Y116A8A.LL P W
AFF_Y13C8_223.D Aff_Y13C8_223.D P W
AFF_Y25C1A.A Aff_Y25C1A.A P W
AFF_Y37D8A.21 Aff_Y37D8A.21 P W
AFF_Y38F2A_6126.E Aff_Y38F2A_6126.E P W
AFF_Y40H7.D Aff_Y40H7.D P W
AFF_Y46B2_176.B Aff_Y46B2_176.B P W
AFF_Y54E10A_159.C Aff_Y54E10A_159.C P W
AFF_Y73F8A.X Aff_Y73F8A.X P W
AFF_ZC395.7 Aff_ZC395.7 P W
AFF_ZK1236.5 Aff_ZK1236.5 P W
B0035.14 Aff_B0035.14 P W All gene names: dnj-1; B0035.14; 4M69; CE05169; NM_069721; WBGene00001019; WP:CE05169 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain. WormBase CDS description: DNAJ protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

B0035.4 Aff_B0035.4 P W All gene names: tag-317; B0035.4; B0035.4.1; B0035.4.2; B0035.4.3; 4M79; 4M81; CE05162; WBGene00007107; WP:CE05162 WormBase description: paramyosin like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0041.3 Aff_B0041.3 P W All gene names: B0041.3; 1F213; CE07668; WBGene00015008; WP:CE07668
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0205.6 Aff_B0205.6 P W All gene names: B0205.6; 1L315; CE30405; WBGene00015021; WP:CE30405 WormBase description: aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0205.8 Aff_B0205.8 P W All gene names: B0205.8; 1L306; CE17322; WBGene00015022; WP:CE17322
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0213.3 Aff_B0213.3 P W All gene names: nlp-28; B0213.3; 5E463; CE16774; NM_071709; WBGene00003766; WP:CE16774
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination                                                                      

B0238.10 Aff_B0238.10 P W All gene names: B0238.10; 5F753; CE07700; WBGene00015074; WP:CE07700 WormBase description: acyltransfersase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster E                               

B0252.4 Aff_B0252.4 P W All gene names: cyn-10; cyp-10; B0252.4; 2H202; CE02420; CE27567; NM_063015; WBGene00000886; WP:CE02420; WP:CE27567 WormBase description: cyp-10 encodes a divergent cyclophilin isoform that is functional when expressed in E. coli.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0285.4 Aff_B0285.4 P W All gene names: B0285.4; 3F433; CE00643; WBGene00007137; WP:CE00643
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

B0303.15 Aff_B0303.15 P W All gene names: B0303.15; 3J807; CE00004; WBGene00015133; WP:CE00004 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Ribosomal protein L11
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

B0303.7 Aff_B0303.7 P W All gene names: B0303.7; 3J787; CE36521; WBGene00015128; WP:CE36521 WormBase description: Neutrophil oxidase factor
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

B0334.5 Aff_B0334.5 P W All gene names: B0334.5; 2L789; CE30122; WBGene00007145; WP:CE30122 WormBase description: phytoene synthase precursor
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0336.6 Aff_B0336.6 P W All gene names: B0336.6; B0336.6.1; B0336.6.2; 3G780; CE29545; WBGene00015146; WP:CE29545 WormBase description: B0336.6 encodes an Abl interactor ortholog, with an SH3 domain, required for embryonic development; mammalian Abl interactors are associated with synaptosomes, growth cone particles, and macropinocytic vesicles, and may regulate Rac-dependent cytoskeletal reorganization and Abl kinase activity; B0336.6's orthologs include human SSH3BP1 (ABI1; OMIM:603050, mutated in acute myeloid leukemia), ABI-2 (OMIM:606442), and NESH (OMIM:606363); B0336.6 binds UNC-53 in two-hybrid screens.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

B0361.2 Aff_F56C9.4 P W All gene names: B0361.2; 3I397; CE33549; CE38480; WBGene00015156; WP:CE33549; WP:CE38480
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0361.3 Aff_B0361.3 P W All gene names: B0361.3; B0361.3.1; B0361.3.2; 3I373; CE34242; WBGene00015157; WP:CE34242
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0412.4 Aff_B0412.4 P W All gene names: rps-29; B0412.4; B0412.4.1; B0412.4.2; 3B413; CE26849; NM_064862; WBGene00004498; WP:CE26849 WormBase description: rps-29 encodes a small ribosomal subunit S29 protein; by homology, RPS-29 is predicted to function in protein biosynthesis; in C. elegans, RPS-29 activity is broadly required for embryonic and germline development, normal body coloration and morphology, normal postembryonic growth rates, and the overall health of the animal. WormBase CDS description: 40S ribosomal protein S29
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

B0414.8 Aff_B0414.8 P W All gene names: B0414.8; 1G380; CE30413; CE36910; WBGene00015176; WP:CE30413; WP:CE36910
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0416.6 Aff_B0416.6 P W All gene names: gly-13; B0416.6; CE26434; NM_077165; WBGene00001638; WP:CE26434; XJ912 WormBase description: alpha-1,3-mannosyl-glycoprotein beta-1,2-n-acetyglucosaminyltransferase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0491.7 Aff_B0491.7 P W All gene names: B0491.7; 2L641; CE02109; WBGene00007194; WP:CE02109 WormBase description: B0491.7 encodes a putative diphthine synthase orthologous to S. cerevisiae DPH5; DPH5 is an S-adenosylmethionine:EF-2 methyltransferase required for the enzymatic conversion of 3-amino-3-carboxypropyl-histidine to diphthine; DPH5 adds at least the last two of the three methyl groups present in diphthine, and is homologous to bacterial AdoMet:uroporphyrinogen III methyltransferases. WormBase CDS description: diphthine synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0495.6 Aff_B0495.6 P W All gene names: B0495.6; 2H988; CE01764; WBGene00015205; WP:CE01764
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0511.12 Aff_B0511.12 P W All gene names: B0511.12; 1L232; CE28877; WBGene00015237; WP:CE28877
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated                                                   

B0547.1 Aff_B0547.1 P W All gene names: csn-5; B0547.1; B0547.1.1; B0547.1.2; 4G415; CE06722; NM_068440; WBGene00000817; WP:CE06722 WormBase description: csn-5 encodes an ortholog of subunit 5 of the COP9 signalosome complex (CSN5), which in turn is a pan-eukaryotic multiprotein complex that positively regulates E3 ubiquitin ligases, physically interacts with SCF-type E3 ubiquitin ligases, and probably regulates protein degradation; CSN-5 (along with KGB-1 and ZYX-1) physically binds germline RNA helicases (GLH proteins), and csn-5(RNAi) results in sterile worms with small gonads and no oocytes, causing oogenesis to cease, but not affecting the initial assembly of P granules -- a defect essentially identical to that produced by RNAi with a combination of glh-1 and glh-4.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0564.1 Aff_B0564.1 P W All gene names: tin-9.2; B0564.1; 4N865; CE20469; CE37950; NM_070119; WBGene00007201; WBGene00044083; WP:CE20469; WP:CE37950 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C01A2.4 Aff_C01A2.4 P W All gene names: C01A2.4; 1N983; CE34247; WBGene00007216; WP:CE34247
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C01F1.2 Aff_C01F1.2 P W All gene names: C01F1.2; 2E591; CE06743; WBGene00015297; WP:CE06743 WormBase description: C01F1.2 is orthologous to the human gene SCO (CYTOCHROME OXIDASE DEFICIENT, YEAST) HOMOLOG 1 (SCO1; OMIM:603644), which when mutated leads to early-onset hepatic failure; the C01F1.2 protein is predicted to be mitochondrial with 68% accuracy.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

C01F6.9 Aff_C01F6.9 P W All gene names: C01F6.9; 4J862; CE17361; NX; WBGene00007223; WP:CE17361 WormBase description: The C01F6.9 gene resides in an operon that also contains the genes icl-1 and lpl-1.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C01G6.4 Aff_C01G6.4 P W All gene names: C01G6.4; 2J562; CE00866; WBGene00007226; WP:CE00866 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C02F12.8 Aff_C02F12.8 P W All gene names: C02F12.8; CE03902; WBGene00015357; WP:CE03902; XE310
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C03D6.4 Aff_C03D6.4 P W All gene names: npp-14; C03D6.4; 1K238; CE05198; CeNup214; NM_060167; WBGene00003800; WP:CE05198 WormBase description: npp-14 is orthologous to the human gene NUCLEOPORIN, 214-KD (NUP214; OMIM:114350), which encodes part of the nucleopore complex mediating nucleocytoplasmic transport; NUP214, as a fusion gene with DEK (OMIM:125264), is found in a subset of acute myeloid leukemia. WormBase CDS description: nucleoporin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C04F12.10 Aff_C04F12.10 P W All gene names: Ce-face-1; fce-1; C04F12.10; 1K288; CE19683; NM_060181; WBGene00001405; WP:CE19683 WormBase description: fce-1 encodes an ortholog of 'farnesylated-proteins converting enzyme 1' (FACE-1), and thus probably enables post-translational processing of proteins (such as LET-60/RAS) carrying a C-terminal CaaX motif; FCE-1 protein probably accounts for the EDTA-sensitive, tosylphenylalanylchloromethane-insensitive component of CaaX-proteolytic activity in membrane extracts from C. elegans, and FCE-1 can cleave a farnesylated peptide in vitro; the S. cerevisiae homolog of FCE-1 (Ste24p) cleaves the precursor of yeast a-factor mating pheromone after its farnesylated cysteine residue, and transgenic FCE-1 rescues a mating defect of mutant yeast lacking both the Ste24p and the Rce1p CaaX-proteases. WormBase CDS description: Zinc-binding metalloprotease domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C04F5.9 Aff_C04F5.9 P W All gene names: C04F5.9; 5F594; CE19673; WBGene00015451; WP:CE19673
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C04F6.5 Aff_C04F6.5 P W All gene names: dhs-27; C04F6.5; CE37079; NM_076190; WBGene00000990; WP:CE37079; XE32 WormBase description: dhs-27 encodes a short-chain dehydrogenase predicted to be mitochondrial. WormBase CDS description: alcohol/ribitol dehydrogenase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C05D11.12 Aff_C05D11.12 P W All gene names: let-721; C05D11.12; C05D11.12.1; C05D11.12.2; 3H534; CE29662; NM_066014; WBGene00002855; WP:CE29662 WormBase description: The let-721 gene encodes an ortholog of the human gene SIMILAR TO ELECTRON-TRANSFERRING-FLAVOPROTEIN DEHYDROGENASE (ETFDH), which when mutated leads to glutaricaciduria type IIC (OMIM:231675). WormBase CDS description: YAAS
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b Oxidation,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C05D11.9 Aff_C05D11.9 P W All gene names: C05D11.9; 3H518; CE24787; WBGene00015486; WP:CE24787
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Romagnolo et                             
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C05D9.7 Aff_C05D9.7 P W All gene names: C05D9.7; CE07933; WBGene00015474; WP:CE07933; XB736
C06A5.11 Aff_C06A5.3 P W All gene names: sir-2.4; C06A5.11; 1G567; CE27656; NM_059332; WBGene00004803; WP:CE27656
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C06G3.10 Aff_C06G3.10 P W All gene names: cgo-2; cogc-2; C06G3.10; 4H802; CE28817; CELDLC; NM_068691; WBGene00000585; WP:CE28817; cog2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C06G3.11 Aff_C06G3.11 P W All gene names: tin-9.1; C06G3.11; C06G3.11b.1; C06G3.11b.2; 4H808; CE07987; CE33518; WBGene00006572; WP:CE07987; WP:CE33518; tim9a; tim9b WormBase description: tin-9 encodes a member of the Tim10/DDP family of zinc finger proteins, a family of proteins typically involved in mitochondrial protein import, and localized to the mitochondrial intermembrane space.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C07G1.5 Aff_C07G1.5 P W All gene names: hgrs-1; pqn-9; C07G1.5; 4I966; CE32574; NM_068974; WBGene00004101; WP:CE32574 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C07H4.2 Aff_C07H4.2 P W All gene names: clh-5; C07H4.2; C07H4.2.1; C07H4.2.2; 2J386; CE27360; NM_063539; WBGene00000532; WP:CE27360 WormBase description: The clh-5 gene encodes a chloride channel, whose human homologs include CLC1 and CLCN5; the latter homolog is imvolved in receptor-mediated endocytosis. WormBase CDS description: chloride channel protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

C07H6.1 Aff_C07H6.1 P W All gene names: lig-4; C07H6.1; 3I613; CE34522; NM_066252; WBGene00002986; WP:CE34522
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

C07H6.2 Aff_C07H6.2 P W All gene names: C07H6.2; 3I609; CE00756; WBGene00015579; WP:CE00756
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C08B11.7 Aff_C08B11.7 P W All gene names: ubh-4; C08B11.7; 2I328; CE36913; NM_063283; WBGene00006724; WP:CE36913 WormBase description: thiolesterase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C08B11.8 Aff_C08B11.8 P W All gene names: C08B11.8; 2I333; CE01478; WBGene00007435; WP:CE01478
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, Wang et al 2003  S4 Early genes,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

C08F8.1 Aff_C08F8.1 P W All gene names: C08F8.1; 4L915; CE05248; WBGene00007443; WP:CE05248
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C08H9.3 Aff_C08H9.3 P W All gene names: C08H9.3; 2K174; CE36914; CE37608; WBGene00007464; WP:CE36914; WP:CE37608 WormBase description: glucosyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

C09G5.2 Aff_C09G5.2 P W All gene names: C09G5.2; 2K992; CE15608; WBGene00007488; WP:CE15608 WormBase description: C09G5.2 encodes an ortholog of S. cerevisiae DPH2/YKL191W and human DPH2L2 (OMIM:603456); C09G5.2 is a putative protein component of diphtamide synthesis; C09G5.2 has no obvious function in mass RNAi assays. WormBase CDS description: Diphthamide biosynthesis protein (diptheria resistance protein)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C                                                                          

C10F3.5 Aff_C10F3.5 P W All gene names: pcm-1; C10F3.5; 5G442; CE08070; NM_072150; WBGene00003954; WP:CE08070 WormBase description: L-isoaspartyl/D-aspartyl methyltransferase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C13B9.3 Aff_C13B9.3 P W All gene names: phi-30; C13B9.3; 3H712; CE01778; WBGene00015734; WP:CE01778 WormBase description: C13B9.3 encodes a delta subunit of the coatomer (COPI) complex; in mass RNAi assays, C13B9.3 is required for fertility and general health.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C14A11.6 Aff_C14A11.6 P W All gene names: C14A11.6; CE08154; WBGene00015751; WP:CE08154; XD426
C14A4.3 Aff_C14A4.3 P W All gene names: C14A4.3; CE32796; NM_063881; WBGene00007556; WP:CE32796
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Romagnolo et al 2002  Fig3b                               
                                              Metabolism, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C14A4.5 Aff_C14A4.5 P W All gene names: crn-5; C14A4.5; 2K883; CE02146; NM_063883; WBGene00000798; WP:CE02146 WormBase description: Prokaryotic ribonuclease PH
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C14C10.4 Aff_C14C10.4 P W All gene names: C14C10.4; C14C10.4.1; C14C10.4.2; 5N74; CE05283; WBGene00007587; WP:CE05283
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

C14C11.7 Aff_C14C11.7 P W All gene names: C14C11.7; 5G146; CE06826; WBGene00015769; WP:CE06826
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C15F1.6 Aff_C15F1.C P W All gene names: art-1; C15F1.6; 2H262; CE20509; NM_063029; WBGene00000198; WP:CE20509 WormBase description: a protein similar to synaptic glycoprotein SC2 from mammals.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C15H11.4 Aff_C15H11.4 P W All gene names: dhs-22; C15H11.4; 5O900; CE08181; NM_074169; WBGene00000985; WP:CE08181 WormBase description: dhs-22 encodes a short-chain dehydrogenase predicted to be mitochondrial. WormBase CDS description: dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C15H11.8 Aff_C15H11.8 P W All gene names: C15H11.8; 5O904; CE08185; WBGene00007616; WP:CE08185 WormBase description: DNA-directed RNA polymerase I like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C16A3.2 Aff_C16A3.2 P W All gene names: C16A3.2; 3H479; CE08188; WBGene00015807; WP:CE08188 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, IVb male                                
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C16A3.5 Aff_C16A3.5 P W All gene names: C16A3.5; C16A3.5.1; C16A3.5.2; 3H471; CE04005; WBGene00015810; WP:CE04005 WormBase description: NADH-ubiquinone oxidoreductase B22
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, McCarroll et al 2004  SFig1-4 conserved w/                                  
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

C16C10.5 Aff_C16C10.5 P W All gene names: C16C10.5; 3F260; CE01496; WBGene00007626; WP:CE01496 WormBase description: Glutaredoxin, Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class2                               
                                              shorten lifespan                                                                   

C17C3.1 Aff_C17C3.1 P W All gene names: C17C3.1; 2F863; CE27070; CE27071; CE27072; CE27073; CE39676; WBGene00015887; WP:CE27070; WP:CE27071; WP:CE27072; WP:CE27073; WP:CE39676
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C17G1.4 Aff_C17G1.4 P W All gene names: C17G1.4; CE08283; CE37318; WBGene00007651; WP:CE08283; WP:CE37318; XK546
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, fem1 enriched                                
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories                                                          

C17G10.1 Aff_C17G10.1 P W All gene names: C17G10.1; C17G10.1.1; C17G10.1.2; 2F887; CE01785; WBGene00015915; WP:CE01785
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C17G10.2 Aff_C17G10.2 P W All gene names: C17G10.2; 2F885; CE29583; WBGene00015916; WP:CE29583 WormBase description: TPR domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Wang et al                               
                                              2003  S5 genes common to feeding ANOVA, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA                                                      

C17G10.8 Aff_C17G10.8 P W All gene names: dhs-6; C17G10.8; CED6.1; 2F906; CE02490; WBGene00000970; WP:CE02490 WormBase description: The dhs-6 locus is predicted to encode four transcripts derived from alternative splicing and alternative transcriptional initiation sites; the longest transcript is predicted to encode a member of the eukaryotic translation initiation factor family within its amino-terminal end, and is a member of both the SCP-2 sterol transfer family and short-chain dehydrogenase-reductase families within its carboxyl-terminal end; DHS-6 is predicted to be mitochondrial. WormBase CDS description: Alcohol dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C18A3.2 Aff_C18A3.2 P W All gene names: C18A3.2; 2G9; CE27707; WBGene00015940; WP:CE27707
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              F, Reinke et al 2004, list of genes in cluster order,                              
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C18B2.4 Aff_C18B2.4 P W All gene names: C18B2.4; CE04043; WBGene00015955; WP:CE04043; XE224
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C18E9.6 Aff_C18E9.6 P W All gene names: C18E9.6; 2J262; CE05298; WBGene00007686; WP:CE05298
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

C24D10.4 Aff_C24D10.4 P W All gene names: C24D10.4; 4F925; CE16876; WBGene00016055; WP:CE16876
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

C24D10.6 Aff_C24D10.6 P W All gene names: C24D10.6; 4F924; CE16878; WBGene00016057; WP:CE16878
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C24F3.2 Aff_C24F3.2 P W All gene names: C24F3.2; 4K987; CE18519; WBGene00007697; WP:CE18519 WormBase description: Dual specificity phosphatase, catalytic domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C24F3.4 Aff_C24F3.4 P W All gene names: C24F3.4; 4K980; CE18521; WBGene00007698; WP:CE18521
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C25A1.13 Aff_C25A1.13 P W All gene names: C25A1.13; 1K769; CE08379; WBGene00007712; WP:CE08379 WormBase description: NADH-ubiquinone oxidoreductase B8 subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C26B2.1 Aff_C26B2.1 P W All gene names: C26B2.1; 4I784; CE04087; WBGene00016124; WP:CE04087
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 daf-16 Resveratrol                                                     

C26E6.6 Aff_C26E6.6 P W All gene names: C26E6.6; C26E6.6.1; C26E6.6.2; 3G25; CE39477; WBGene00016142; WP:CE39477 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Ribosomal protein L3
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C27A12.9 Aff_C27A12.9 P W All gene names: C27A12.9; 1G638; CE36272; WBGene00016159; WP:CE36272
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Climbing, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

C27F2.8 Aff_C27F2.8 P W All gene names: C27F2.8; 3G82; CE39000; WBGene00016170; WP:CE39000
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C27H6.4 Aff_C27H6.4 P W All gene names: C27H6.4; 5K464; CE08428; CE31322; WBGene00007786; WP:CE08428; WP:CE31322
C28H8.12 Aff_C28H8.12 P W All gene names: dnc-2; C28H8.12; 3H14; CE01823; NM_065885; WBGene00001018; WP:CE01823 WormBase description: dnc-2 encodes a member of the dynamitin family that affects spindle alignment in polarized cells in early embryos, nuclear movement, spindle morphology, chromosome segregation, and pronuclear migration.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C30B5.2 Aff_C30B5.2 P W All gene names: C30B5.2; 2G487; CE31889; CE31890; WBGene00016244; WP:CE31889; WP:CE31890
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C30C11.1 Aff_C30C11.1 P W All gene names: C30C11.1; 3J539; CE00100; WBGene00016249; WP:CE00100
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C30H6.8 Aff_C30H6.8 P W All gene names: C30H6.8; 4S327; CE15652; WBGene00007825; WP:CE15652 WormBase description: Thioredoxins
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C33H5.15 Aff_C33H5.15 P W All gene names: sgo-1; C33H5.15; 4I560; CE34732; NM_068889; WBGene00016381; WP:CE34732
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C33H5.7 Aff_C33H5.7 P W All gene names: C33H5.7; 4I539; CE04150; WBGene00016374; WP:CE04150
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, list of genes in cluster F, Reinke et al 2004, wt                            
                                              vs glp-4 enriched genes, Reinke et al 2004, list of                                
                                              genes in cluster order, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C34B2.10 Aff_C34B2.10 P W All gene names: phi-56; C34B2.10; C34B2.10.1; C34B2.10.2; 1L258; CE16898; WBGene00016395; WP:CE16898
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C34B2.2 Aff_C34B2.2 P W All gene names: kbp-5; C34B2.2; 1L263; CE16890; NM_060399; WBGene00016387; WP:CE16890
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C34D4.13 Aff_C34D4.13 P W All gene names: C34D4.13; 4H896; CE34735; WBGene00016404; WP:CE34735
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C34E10.8 Aff_C34E10.8 P W All gene names: C34E10.8; 3G340; CE32158; WBGene00016409; WP:CE32158
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen                                                    

C34G6.7 Aff_C34G6.7 P W All gene names: pqn-19; C34G6.7; C34G6.7a.1; C34G6.7a.2; C34G6.7b.1; C34G6.7b.2; 1G480; CE29700; CE32816; NM_059309; NM_182013; WBGene00004109; WP:CE29700; WP:CE32816 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C35B8.3 Aff_C35B8.3 P W All gene names: C35B8.3; C35B8.3a.1; C35B8.3a.2; CE02536; CE27827; WBGene00016438; WP:CE02536; WP:CE27827; XJ835
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, herm soma                                    
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol                                                                        

C35D10.10 Aff_C35D10.10 P W All gene names: C35D10.10; 3F950; CE01191; WBGene00016446; WP:CE01191
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C35D10.9 Aff_C35D10.9 P W All gene names: ced-4; C35D10.9; 3F943; CE01203; CE38154; WBGene00000418; WP:CE01203; WP:CE38154 WormBase description: ced-4 encodes a novel protein; along with CED-3, CED-4 is required for the initiation of programmed cell death; accordingly, genetic analyses indicate that ced-3 and ced-4 function upstream of ced-1, ced-2, and nuc-1 in the programmed cell death pathway; in yeast two-hybrid experiments, and upon coexpression in mammalian cells, CED-4 interacts with CED-9, an anti-apoptotic BCL-2 homolog; coexpression of CED-4 and CED-9 results in redistribution of CED-4 from the cytosol to organellar membranes, suggesting that CED-9 may negatively regulate CED-4 activity by sequestering CED-4 to intracellular membranes.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C38D4.6 Aff_C38D4.6 P W All gene names: ceh-3; nob-2; pal-1; C38D4.6; C38D4.6a.1; C38D4.6a.2; C38D4.6b.1; C38D4.6b.2; 3F896; CE05383; CE27837; NM_065590; WBGene00003912; WP:CE05383; WP:CE27837 WormBase description: pal-1 encodes a homeodomain protein that is the C. elegans Caudal ortholog; PAL-1 is required maternally and embryonically for cell fate specification and posterior patterning during embryogenesis; PAL-1 is also required postembryonically for fate specification of the posterior V6 neuroectoblast during male tail development; PAL-1 is expressed in posterior blastomeres beginning at the four-cell stage of embryogenesis and its expression continues during embryogenesis in posterior-derived tissues and cells undergoing movement or forming midline structures; pal-1 is subject to both transcriptional and translational regulation.
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              Jones et al 2001  Non dauer genes P<0.05, McCarroll et                             
                                              al 2004  SFig1-4 conserved w/ Drosoph, Reinke et al                                
                                              2004, fem1 enriched genes, Reinke et al 2004, list of                              
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, list of genes in cluster E                                 

C40H1.6 Aff_C40H1.6 P W All gene names: C40H1.6; 3K421; CE00114; WBGene00008041; WP:CE00114
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Roy et al 2002  S3 muscle genes,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C42C1.11 Aff_C42C1.11 P W All gene names: AP-1; C42C1.11; C42C1.11a.1; C42C1.11a.2; C42C1.11c.1; C42C1.11c.2; 4N45; CE24840; CE33564; CE33565; WBGene00016589; WP:CE24840; WP:CE33564; WP:CE33565 WormBase description: peptidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C42C1.16 Aff_C42C1.10 P W All gene names: C42C1.16; 4N49; CE29223; WBGene00016593; WP:CE29223
C42C1.5 Aff_C42C1.5 P W All gene names: tag-335; C42C1.5; 4N40; CE16911; WBGene00016583; WP:CE16911 WormBase description: guanyltransferase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C43E11.7 Aff_C43E11.7 P W All gene names: ndx-7; C43E11.7; 1E808; CE30504; NM_058935; WBGene00003584; WP:CE30504 WormBase description: ndx-7 encodes a NUDIX hydrolase; by sequence comparison, NDX-7 is predicted to function as a pyrophosphatase, and is most closely related to the mouse RP2 protein that has unknown substrate specificity but is regulated transcriptionally by the presence of androgens; in C. elegans, loss of ndx-7 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, consistent with the proposed nonessential roles for Nudix proteins in eliminating potentially toxic nucleotide metabolites from cells and modulating levels of metabolic intermediates by shuttling them into alternative biochemical pathways.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S5 genes common to                                   
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C43E11.8 Aff_C43E11.8 P W All gene names: C43E11.8; 1E812; CE08686; WBGene00016606; WP:CE08686
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated                                                   

C44B9.3 Aff_C44B9.3 P W All gene names: C44B9.3; 3L966; CE05405; WBGene00008080; WP:CE05405
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C44C1.2 Aff_C44C1.2 P W All gene names: C44C1.2; CE30126; WBGene00016642; WP:CE30126; XB577
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

C44H4.7 Aff_C44H4.7 P W All gene names: eor-2; C44H4.7; CE31445; CE31446; WBGene00001325; WP:CE31445; WP:CE31446; XP225 WormBase description: eor-2 encodes an unfamiliar protein, similar to CG17233 in Drosophila and KIAA1205 in H. sapiens, required for signal transduction by both RAS and Wnt pathways in both excretory system development and P12 fate specification.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C45B11.1 Aff_C45B11.1 P W All gene names: pak-4; tag-66; C45B11.1; 5L518; CE05425; CE20564; WBGene00006443; WP:CE05425; WP:CE20564 WormBase description: P21-Rho-binding domain ; Eukaryotic protein kinase domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C46H3.2 Aff_C46H3.2 P W All gene names: C46H3.2; C46H3.2b.1; C46H3.2b.2; CE29228; CE33921; WBGene00016725; WP:CE29228; WP:CE33921; XB832 WormBase description: tyrosine-protein kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C47B2.2 Aff_C47B2.2 P W All gene names: C47B2.2; C47B2.2b.1; C47B2.2b.2; CE17562; CE23599; WBGene00008131; WP:CE17562; WP:CE23599
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C47E12.4 Aff_C47E12.4 P W All gene names: pyp-1; C47E12.4; C47E12.4c.1; C47E12.4c.2; C47E12.4c.3; C47E12.4d.1; C47E12.4d.2; C47E12.4d.3; 4K760; CE05448; CE33767; CE33768; CE33769; WBGene00008149; WP:CE05448; WP:CE33767; WP:CE33768; WP:CE33769 WormBase description: inorganic pyrophosphatase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C48E7.3 Aff_C48E7.3 P W All gene names: lpd-2; C48E7.3; 1G831; CE29953; NM_059405; WBGene00003059; WP:CE29953 WormBase description: lpd-2 encodes a predicted transcription factor with homology to transcription factors of the CCAAT/Enhancer Binding Protein family (C/EBPA and B, OMIM:116897, 189965, associated with the regulation of mammalian adipocyte differentiation); in C. elegans, LPD-2 activity is required for normal lipid metabolism and wild-type levels of lipogenic enzyme expression, as well as for larval development; in addition, LPD-2 may be part of a conserved pathway regulating lipogenesis, as LPD-2 appears to positively regulate expression of sbp-1, which encodes the C. elegans Sterol Regulatory Element Binding Protein (SREBP) homolog, a basic helix-loop-helix-type transcription factor also required for normal lipid metabolism and larval development.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Romagnolo et                             
                                              al 2002  Fig3b TF, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C49C3.15 Aff_C49C3.15 P W All gene names: C49C3.15; 4S279; CE37493; WBGene00008204; WP:CE37493
C50F4.16 Aff_C50F4.11 P W All gene names: C50F4.16; C50F4.16.1; C50F4.16.2; 5K18; CE28213; WBGene00008238; WP:CE28213 WormBase description: The C50F4.16 gene encodes a NUDIX hydrolase.
C50F7.4 Aff_C50F7.4 P W All gene names: C50F7.4; 4I495; CE04242; SCB2; WBGene00016844; WP:CE04242 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: succinyl-CoA synthetase beta chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C52E4.2 Aff_C52E4.2 P W All gene names: mif-2; C52E4.2; C52E4.2.1; C52E4.2.2; 5M458; CE08944; NM_073602; WBGene00003235; WP:CE08944 WormBase description: macrophage migration inhibitory factor like protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C56A3.6 Aff_C56A3.6 P W All gene names: C56A3.6; 5O34; CE32339; WBGene00008345; WP:CE32339 WormBase description: EF hand (2 domains)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C56C10.10 Aff_C56C10.10 P W All gene names: C56C10.10; 2G884; CE02564; WBGene00016966; WP:CE02564 WormBase description: TPR domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C56C10.3 Aff_C56C10.3 P W All gene names: phi-27; tag-309; C56C10.3; C56C10.3.1; C56C10.3.2; 2G881; CE02568; WBGene00016961; WP:CE02568
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

CD4.3 Aff_CD4.3 P W All gene names: CD4.3; CD4.3.1; CD4.3.2; 5G73; CE16951; WBGene00016989; WP:CE16951
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

CD4.4 Aff_CD4.4 P W All gene names: CD4.4; 5G71; CE16952; WBGene00016990; WP:CE16952
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

D1007.5 Aff_D1007.5 P W All gene names: D1007.5; D1007.5a.1; D1007.5a.2; D1007.5b.1; D1007.5b.2; 1F150; CE29034; CE33577; WBGene00017003; WP:CE29034; WP:CE33577
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

D1022.1 Aff_D1022.1 P W All gene names: ubc-6; D1022.1; 2H771; CE29241; CE39712; NM_063165; WBGene00006703; WP:CE29241; WP:CE39712 WormBase description: Ubiquitin-conjugating enzyme
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

D2013.10 Aff_D2013.10 P W All gene names: tag-175; D2013.10; 2J613; CE17622; WBGene00006520; WBGene00008406; WP:CE17622
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

D2013.6 Aff_D2013.6 P W All gene names: D2013.6; 2J621; CE00931; WBGene00008404; WP:CE00931
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

D2023.4 Aff_D2023.4 P W All gene names: D2023.4; D2023.4.1; D2023.4.2; 5M304; CE09074; WBGene00008408; WP:CE09074 WormBase description: D2023.4 encodes a thialysine N-(epsilon)-acetyltransferase, belonging to the GCN5-related N-acetyltransferase superfamily; recombinant D2023.4 protein forms a catalytically active homodimer, most efficiently catalysing the N-acetylation of thialysine [S-(2-aminoethyl)-L-cysteine], O-(2-aminoethyl)-L-serine and S-(2-aminoethyl)-D,L-homocysteine. WormBase CDS description: diamine acetyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Early genes,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

D2023.5 Aff_D2023.5 P W All gene names: D2023.5; 5M306; CE09075; WBGene00008409; WP:CE09075 WormBase description: thiosulphate sulphurtransferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

D2024.6 Aff_D2024.6 P W All gene names: cap-1; D2024.6; D2024.6.1; D2024.6.2; 4H994; CAPZ/A; CE04295; NM_068744; WBGene00000292; WP:CE04295 WormBase description: cap-1 encodes an F-actin capping protein alpha subunit that affects fertility; likely expressed in touch receptor neurons.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

D2030.5 Aff_D2030.5 P W All gene names: mce-1; D2030.5; 1I159; CE09082; WBGene00008415; WP:CE09082 WormBase description: B.subtilis YQJC protein like
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

D2030.8 Aff_D2030.8 P W All gene names: D2030.8; 1I169; CE28545; WBGene00008418; WP:CE28545
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

D2089.3 Aff_D2089.3 P W All gene names: D2089.3; 2K952; CE00938; WBGene00008434; WP:CE00938
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

D2096.2 Aff_D2096.2 P W All gene names: D2096.2; 4J145; CE29245; CE38496; WBGene00017070; WP:CE29245; WP:CE38496
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

DY3.1 Aff_DY3.1 P W All gene names: tim-13; tin-13; DY3.1; 1J336; CE15745; NM_059969; WBGene00006574; WP:CE15745; tim13
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

E01G6.1 Aff_E01G6.1 P W All gene names: E01G6.1; CE03112; WBGene00008449; WP:CE03112; XM883 WormBase description: pancreatic trypsin inhibitor (kunitz) protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

E02H1.2 Aff_E02H1.2 P W All gene names: E02H1.2; 2J878; CE01537; WBGene00008456; WP:CE01537 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: GTP binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated, Wang et al 2003  S5                              
                                              genes common to feeding ANOVA, Wang et al 2003  S3                                 
                                              genes pass one-way ANOVA                                                           

EEED8.10 Aff_EEED8.10 P W All gene names: EEED8.10; 2F686; CE39344; WBGene00017138; WP:CE39344 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. WormBase CDS description: Probable RNA binding protein.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, wt herm vs wt male enriched                             
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F01F1.15 Aff_F01F1.11 P W All gene names: F01F1.15; F01F1.15.1; F01F1.15.2; 3G958; CE26884; WBGene00017169; WP:CE26884
F01F1.2 Aff_F01F1.2 P W All gene names: F01F1.2; 3G969; CE26886; WBGene00017159; WP:CE26886
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F01F1.8 Aff_F01F1.8 P W All gene names: cct-6; F01F1.8; F01F1.8a.1; F01F1.8a.2; F01F1.8b.1; F01F1.8b.2; F01F1.8b.3; 3G944; CE01234; CE30647; NM_171135; NM_171136; WBGene00000381; WP:CE01234; WP:CE30647 WormBase description: eukaryotic cytosolic chaperonin; affects viability and fertility, and is expressed in various muscle and neuronal cells: near the pharynx, near the anal sphincter, in the ventral nerve cord and the nerve ring; occasionally the expression is visible in hypodermal cells and in some vulval cells.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

F01G10.1 Aff_F01G10.1 P W All gene names: F01G10.1; F01G10.1.1; F01G10.1.2; 4L9; CE09163; WBGene00008506; WP:CE09163 WormBase description: The F01G10.1 gene encodes an ortholog of the human gene TRANSKETOLASE (TKT; OMIM:606781), which when mutated leads to Wernicke-Korsakoff syndrome (OMIM:277730). WormBase CDS description: transketolase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F02E8.3 Aff_F02E8.3 P W All gene names: aps-2; F02E8.3; CE07018; NM_076366; WBGene00000157; WP:CE07018; XF77 WormBase description: The aps-2 gene encodes an adaptin: specifically, it encodes an ortholog of the sigma2 subunit of adaptor protein complex 2 (AP-2), which mediates endocytosis from the plasma membrane; APS-2 appears to be required for embryonic and larval development and for normal body morphology, but is not required for endocytosis of yolk protein in developing oocytes; APS-2 is expressed in nearly all cells during embryogenesis, but during larval and adult stages, expression is confined to neurons and some hypodermal cells, including vulval hypodermal cells during the fourth larval stage. WormBase CDS description: Clathrin coat assembly protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

F02E9.1 Aff_F02E9.1 P W All gene names: F02E9.1; 1I981; CE09183; WBGene00008528; WP:CE09183
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F02E9.4 Aff_F02E9.4 P W All gene names: pqn-28; F02E9.4; 1I999; CE33046; NM_059883; WBGene00004117; WP:CE33046 WormBase description: pqn-28 encodes an ortholog of the SIN3 family of histone deacetylase subunits, which also has a glutamine/asparagine-rich domain, possibly involved in epigenetic regulation; pqn-28 has no obvious phenotype in mass RNAi screens; on the basis of its homology, PQN-28, when activated by promoter-specific transcription factors, is expected to work in conjunction with other histone deacetylase components to induce chromatin silencing; PQN-28 may also silence genes by colocating to them with the O-GlcNAc transferase homolog OGT-1.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 daf-16                             
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

F02E9.5 Aff_F02E9.5 P W All gene names: F02E9.5; 1J2; CE23628; WBGene00008530; WP:CE23628
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, ViswanathanM et al 2005  S2 sir-2.1 regulated,                             
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S8 SAGE genes in the dauer exit                                           

F02E9.7 Aff_F02E9.7 P W All gene names: F02E9.7; 1I991; CE09190; WBGene00008531; WP:CE09190 WormBase description: acid phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F07A11.2 Aff_F07A11.2 P W All gene names: F07A11.2; F07A11.2b.1; F07A11.2b.2; F07A11.2b.3; 2L884; CE03144; CE27915; WBGene00008546; WP:CE03144; WP:CE27915 WormBase description: glucosamine-fructose-6-phosphate aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes                                              

F08B6.2 Aff_F08B6.E P W All gene names: gpc-2; F08B6.2; F08B6.2.1; F08B6.2.2; F08B6.2.3; 1H335; CE20656; NM_059534; WBGene00001682; WP:CE20656 WormBase description: gpc-2 encodes one of two C. elegans heterotrimeric G protein gamma subunits; gpc-2 is required, along with its partner GPB-1, a G protein beta subunit, for proper mitotic spindle positioning and orientation during early embryonic cell divisions; to date, GPC-2 expression has been reported in electrically excitable cells (all neurons and muscles).
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F08F1.7 Aff_F08F1.7 P W All gene names: tag-123; F08F1.7; CE09254; WBGene00006472; WP:CE09254; XJ38
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F08F8.2 Aff_F08F8.2 P W All gene names: F08F8.2; 3I451; CE30649; WBGene00017268; WP:CE30649 WormBase description: Hydroxymethylglutaryl-coA reductase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

F08G12.3 Aff_F08G12.3 P W All gene names: F08G12.3; CE03168; WBGene00008587; WP:CE03168; XL921
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma                                     

F08G2.4 Aff_F08G2.4 P W All gene names: F08G2.4; 2O121; 2O123; CE19776; WBGene00008576; WP:CE19776
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S3  genes pass                                   
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

F09E5.13 Aff_F09E5.13 P W All gene names: agt-2; cAGT-2; F09E5.13; 2F660; CE02608; NM_062607; WBGene00000094; WP:CE02608 WormBase description: agt-2 encodes a paralog of the DNA repair enzyme O6-Alkylguanine DNA-alkyltransferase (AGT); AGT-2 has AGT biochemical activity and is expressed at all developmental stages.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

F09E5.3 Aff_F09E5.3 P W All gene names: F09E5.3; F09E5.3.1; F09E5.3.2; 2F665; CE02610; WBGene00017283; WP:CE02610 WormBase description: Deoxyribose-phosphate aldolase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F09E5.5 Aff_F09E5.5 P W All gene names: F09E5.5; F09E5.5.1; F09E5.5.2; 2F661; CE29752; WBGene00017284; WP:CE29752
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen                                                                       

F09E5.8 Aff_F09E5.8 P W All gene names: F09E5.8; 2F641; CE02615; WBGene00017286; WP:CE02615
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F09F7.4 Aff_F09F7.4 P W All gene names: F09F7.4; F09F7.4a.1; F09F7.4a.2; F09F7.4b.1; F09F7.4b.2; F09F7.4b.3; 3G645; CE00689; CE30654; WBGene00017301; WP:CE00689; WP:CE30654 WormBase description: Enoyl-CoA hydratase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F10B5.2 Aff_F10B5.2 P W All gene names: F10B5.2; 2I437; CE01544; WBGene00008639; WP:CE01544
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Romagnolo                             
                                              et al 2002  Fig3b Unkown                                                           

F10C2.2 Aff_F10C2.2 P W All gene names: kup-1; F10C2.2; 5M514; CE09306; NM_073615; WBGene00002241; WP:CE09306; kup1 WormBase description: kup-1 encodes a novel protein that is conserved in C. briggsae, but contains no other known homologs; kup-1 is the upstream gene in an operon with pkc-1, which encodes two protein kinase C isoforms of the nPKC isotype; the polycistronic kup-1/pkc-1 mRNA is detected at low levels in embryos and larvae, but its expression greatly increases in adults; as loss of kup-1 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of kup-1 in C. elegans development and/or behavior is not yet known. WormBase CDS description: KUP-1 protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

F10C2.4 Aff_F10C2.4 P W All gene names: F10C2.4; 5M525; CE09308; WBGene00008645; WP:CE09308 WormBase description: F10C2.4 encodes a homolog of the DNA polymerase delta complex subunit A that is required in embryos for the normal timing of embryonic cell divisions (much as DIV-1 is) and, also, for normal chromosome segregation (probably because of defective DNA replication). WormBase CDS description: DNA polymerase family B
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F10C2.6 Aff_F10C2.6 P W All gene names: drs-2; F10C2.6; 5M531; CE31906; NM_073618; WBGene00001095; WP:CE31906 WormBase description: drs-2 encodes a putative aspartyl-tRNA synthetase. WormBase CDS description: aspartyl-tRNA synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Romagnolo et al 2002                                 
                                              Fig3b Protein Synthesis, ViswanathanM et al 2005  S2                               
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F10D11.2 Aff_F10D11.2 P W All gene names: F10D11.2; 1J12; CE32366; WBGene00008648; WP:CE32366
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

F10E7.6 Aff_F10E7.6 P W All gene names: F10E7.6; 2H405; CE04361; WBGene00017348; WP:CE04361
F10G7.3 Aff_F10G7.3 P W All gene names: asf-1; F10G7.3; F10G7.3.1; F10G7.3.2; 2E993; CE39722; WBGene00017368; WP:CE39722
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, fem1 enriched genes, Reinke et al 2004,                                
                                              Fig2b shared gemlines, Reinke et al 2004, list of genes                            
                                              in cluster order, Reinke et al 2004, oogenesis enriched                            
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, wt males vs glp4 male enriched ,                                
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F11G11.7 Aff_F11G11.7 P W All gene names: dnj-9; F11G11.7; 2F149; CE07060; NM_062471; WBGene00001027; WP:CE07060 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, herm soma                                    
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F12F6.6 Aff_F12F6.6 P W All gene names: sec-24.1; F12F6.6; 4M328; CE05594; NM_069777; WBGene00004755; WP:CE05594 WormBase description: sec-24.1 encodes one of two C. elegans Sec24 homologs; in Saccharomyces cerevisiae, Sec24 is a member of the Sec24-Sec23 subunit of the COPII coat complex, assembly of which is essential for the first step of secretory protein transport from the endoplasmic reticulum (ER) to the Golgi; by homology with Sec24, SEC-24.1 is predicted to facilitate vesicle cargo selection, and likely contains multiple, independent sites for binding to secreted proteins; loss of sec-24.1 activity via RNAi indicates that SEC-24.1 is required for cuticle secretion and oogenesis. WormBase CDS description: Yeast hypothetical YIK9 protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F13D12.2 Aff_F13D12.2 P W All gene names: ldh-1; F13D12.2; 2M15; CE02181; LDH; NM_064102; WBGene00002262; WP:CE02181 WormBase description: ldh-1 is orthologous to the human gene LACTATE DEHYDROGENASE B (LDHB; OMIM:150100), which when mutated leads to lactate dehydrogenase-B deficiency. WormBase CDS description: L-lactate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Early genes,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

F13G3.11 Aff_F13G3.7 P W All gene names: F13G3.11; F13G3.11.1; F13G3.11.2; 1H885; CE28913; WBGene00008769; WP:CE28913
F13G3.4 Aff_F13G3.4 P W All gene names: dylt-1; F13G3.4; 1H876; CE17659; NM_059662; WBGene00008764; WP:CE17659
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Romagnolo et al 2002  Fig3b others,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F13G3.9 Aff_F13G3.9 P W All gene names: mif-3; F13G3.9; 1H890; CE09371; NM_059668; WBGene00003236; WP:CE09371 WormBase description: macrophage migratory inhibitory factor MIF like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, list of genes in cluster E, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F13H10.4 Aff_F13H10.4 P W All gene names: F13H10.4; 4L782; CE05625; WBGene00008775; WP:CE05625 WormBase description: F13H10.4 is orthologous to the human gene A-GLUCOSIDASE I (GCS1; OMIM:601336), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

F17A9.2 Aff_F17A9.2 P W All gene names: F17A9.2; 5G593; CE19798; WBGene00017534; WP:CE19798
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order, Wang                            
                                              et al 2003  S5 genes common to feeding ANOVA, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA                                              

F17C11.7 Aff_F17C11.7 P W All gene names: F17C11.7; 5L438; CE05654; CE37354; WBGene00008918; WP:CE05654; WP:CE37354
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F17H10.1 Aff_F17H10.1 P W All gene names: F17H10.1; CE03226; WBGene00008925; WP:CE03226; XN725
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F18A1.2 Aff_F18A1.2 P W All gene names: lin-26; F18A1.2; F18A1.2.1; F18A1.2.2; F18A1.2.3; 2H973; CE27972; WBGene00003012; WP:CE27972 WormBase description: lin-26 encodes a putative C2H2 zinc finger-containing protein required for proper differentiation of ectodermal and mesodermal epithelial cells; LIN-26 is expressed in many different cell types including the rectal rep cells, the somatic gonad, glial cells, and hypodermal cells; ectopic LIN-26 expression during embryogenesis induces epithelial-like cell fates suggesting that LIN-26 is sufficient for epithelial differentiation. WormBase CDS description: transcription factor
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, PAL-1 target genes,                             
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F20B6.2 Aff_F20B6.2 P W All gene names: vha-12; F20B6.2; F20B6.2.1; F20B6.2.2; CE04424; NM_076310; WBGene00006921; WP:CE04424; XE811 WormBase description: vacuolar ATP synthase (strong)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F20D1.3 Aff_F20D1.3 P W All gene names: F20D1.3; F20D1.3.1; F20D1.3.2; CE31486; WBGene00008975; WP:CE31486; XP595
F20D1.4 Aff_F20D1.4 P W All gene names: F20D1.4; CE09497; WBGene00008976; WP:CE09497; XP602 WormBase description: transcriptional activator protein PUR-alpha like
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, PAL-1 target genes,                             
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              oogenesis enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

F21D5.8 Aff_F21D5.8 P W All gene names: F21D5.8; 4J504; CE03250; WBGene00009013; WP:CE03250
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F21G4.2 Aff_F21G4.2 P W All gene names: mrp-4; F21G4.2; CE09548; NM_077257; WBGene00003410; WP:CE09548; XK507 WormBase description: The mrp-4 gene encodes a homolog of human CFTR, which when mutated leads to cystic fibrosis (OMIM:219700). WormBase CDS description: multidrug resistance-associated protein
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, fem1 enriched genes, Reinke et al 2004,                                
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes, Reinke et al 2004, wt vs                                 
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F22F7.1 Aff_F22F7.1 P W All gene names: F22F7.1; F22F7.1a.1; F22F7.1a.2; 5C603; CE17691; CE32871; WBGene00017719; WP:CE17691; WP:CE32871
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, herm soma                                 
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

F23B12.6 Aff_F23B12.6 P W All gene names: tag-114; F23B12.6; F23B12.6.1; F23B12.6.2; 5O929; CE09598; WBGene00006465; WBGene00009083; WP:CE09598 WormBase description: protein farnesyltransferase beta subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

F23C8.4 Aff_F23C8.K P W All gene names: ubxn-1; F23C8.4; F23C8.K; 1D3; CE20713; WBGene00017733; WP:CE20713
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

F25B4.1 Aff_F25B4.1 P W All gene names: F25B4.1; F25B4.1.1; F25B4.1.2; 5G193; CE09620; WBGene00017765; WP:CE09620 WormBase description: F25B4.1 is orthologous to the human gene GLYCINE CLEAVAGE SYSTEM T-PROTEIN (AMT; OMIM:238310), which when mutated leads to glycine encephalopathy. WormBase CDS description: aminomethytransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Climbing, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

F25B4.4 Aff_F25B4.4 P W All gene names: F25B4.4; 5G165; CE09622; WBGene00017767; WP:CE09622
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F25G6.8 Aff_F25G6.8 P W All gene names: F25G6.8; F25G6.8.1; F25G6.8.2; 5J44; CE09644; WBGene00017799; WP:CE09644
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

F25H2.13 Aff_F25H2.13 P W All gene names: F25H2.13; 1L153; CE15894; WBGene00009124; WP:CE15894 WormBase description: DEAH-type helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, intrinsic, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol                                                                        

F25H5.6 Aff_F25H5.6 P W All gene names: F25H5.6; F25H5.6.1; F25H5.6.2; 1J734; CE29591; WBGene00009128; WP:CE29591
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F25H8.1 Aff_F25H8.1 P W All gene names: F25H8.1; 4K696; CE05727; WBGene00009131; WP:CE05727 WormBase description: Yeast protein 00926 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 daf-16 Resveratrol, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

F25H9.6 Aff_F25H9.6 P W All gene names: F25H9.6; 5N948; CE09663; WBGene00009138; WP:CE09663 WormBase description: Yeast hypothetical 65.2 KD protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, list of genes in cluster E,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F26A1.1 Aff_F26A1.1 P W All gene names: F26A1.1; 3F941; CE27757; WBGene00017801; WP:CE27757
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F26B1.2 Aff_F26B1.2 P W All gene names: F26B1.2; F26B1.2c.1; F26B1.2c.2; F26B1.2c.3; 1G895; CE09674; CE33057; CE33058; CE33059; CE33060; WBGene00017816; WP:CE09674; WP:CE33057; WP:CE33058; WP:CE33059; WP:CE33060 WormBase description: RNA-binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

F26D10.3 Aff_F26D10.3 P W All gene names: hsp-1; F26D10.3; F26D10.3.1; F26D10.3.2; F26D10.3.3; T28F3.2; 4S223; CE09682; NM_070667; WBGene00002005; WP:CE09682 WormBase description: hsp-1 encodes hsp70A, a member of the heat shock family of proteins; hsp70A is closely related to the Drosophila heat inducible hsp70s and the S. cerevisiae SSA hsp70 subfamily; the hsp-1 gene is normally expressed throughout development and upon heat-shock the hsp-1 mRNA is enhanced 2-6 fold; down-regulation of hsp-1 via RNA interference results in a small reduction in the life-span of an age-1 mutant indicating that hsp-1 may play some role in regulating longevity. WormBase CDS description: HSP-1 heat shock 70kd protein A
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 heat shock,                               
                                              Lund et al 2002 Aging time course Fig2C heatshock,                                 
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Romagnolo et al 2002  Fig2a heat                             
                                              shock, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F26F4.3 Aff_F26F4.3 P W All gene names: rom-1; F26F4.3; 3F995; CE32392; NM_065628; WBGene00004400; WP:CE32392
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F26F4.4 Aff_F26F4.4 P W All gene names: tag-340; F26F4.4; F26F4.4.1; F26F4.4.2; F26F4.4.3; 3F991; CE30767; WBGene00017826; WP:CE30767
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F26H9.6 Aff_F26H9.6 P W All gene names: CE-RAB5; rab-5; F26H9.6; F26H9.6.1; F26H9.6.2; 1J885; CE09711; NM_060080; WBGene00004268; WP:CE09711 WormBase description: rab-5 encodes a rab related protein of the Ras GTPase superfamily that affects both the localization of P-granules and of PAR-2, and also affects embryonic and larval viability and the cytoplasmic appearance of cells in the early embryo. WormBase CDS description: RAS-related protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories                                                                         

F27D4.2 Aff_F27D4.2 P W All gene names: F27D4.2; F27D4.2.1; F27D4.2.2; F27D4.2.3; F27D4.2.4; 1I282; CE36140; WBGene00009188; WP:CE36140
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F27D4.5 Aff_F27D4.5 P W All gene names: tag-173; F27D4.5; F27D4.5.1; F27D4.5.2; 1I305; CE05736; WBGene00006518; WP:CE05736 WormBase description: tag-173/F27D4.5 is orthologous to the human gene BRANCHED CHAIN KETO ACID DEHYDROGENASE E1, ALPHA POLYPEPTIDE (BCKDHB; OMIM:248600), which when mutated leads to maple syrup urine disease, type 1a; F27D4.5 protein is predicted to be mitochondrial. WormBase CDS description: 2-oxoisovalerate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F28C6.3 Aff_F28C6.3 P W All gene names: cpf-1; F28C6.3; 2I892; CE03274; NM_063421; WBGene00000773; WP:CE03274 WormBase description: cleavage stimulation factor like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes, Reinke et al 2004, wt vs                                 
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, Reinke et al 2004, list of genes in                             
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F28C6.8 Aff_F28C6.8 P W All gene names: F28C6.8; 2I897; CE09746; WBGene00009207; WP:CE09746 WormBase description: MAP kinase phosphatase like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F28F8.5 Aff_F28F8.5 P W All gene names: F28F8.5; 5Q54; CE09759; WBGene00009223; WP:CE09759
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

F29A7.6 Aff_F29A7.6 P W All gene names: F29A7.6; 2D42; CE09777; WBGene00017916; WP:CE09777
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

F29B9.10 Aff_F29B9.10 P W All gene names: F29B9.10; 4F422; CE09788; WBGene00017924; WP:CE09788
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F29B9.2 Aff_F29B9.2 P W All gene names: F29B9.2; 4F429; CE09781; CE27145; WBGene00017920; WP:CE09781; WP:CE27145
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F29C12.4 Aff_F29C12.4 P W All gene names: F29C12.4; 2N411; CE19822; WBGene00009246; WP:CE19822 WormBase description: Elongation factor Tu family (contains ATP/GTP binding P-loop), Elongation factor G C-terminus
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b Protein Synthesis,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F29C4.7 Aff_F29C4.7 P W All gene names: F29C4.7; F29C4.7a.1; F29C4.7a.2; F29C4.7b.1; F29C4.7b.2; 4A876; CE17724; CE31493; CE37226; WBGene00017929; WP:CE17724; WP:CE31493; WP:CE37226 WormBase description: F29C4.7 is orthologous to human RBM15 (OMIM:606077, mutated in infantile acute megakaryoblastic leukemia) and Drosophila NITO; F29C4.7 encodes a paralog of DIN-1; like DIN-1, it has N-terminal RNA recognition motifs (RRMs) and a C-terminal SID/RD (SMRT interaction domain/repressor) domain.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

F29D10.4 Aff_F29D10.4 P W All gene names: hum-1; F29D10.4; 1J422; CE05763; NM_059992; WBGene00002035; WP:CE05763 WormBase description: myosin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McElwee et al 2003  T1 targets of daf-16,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, list of                             
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F29G9.3 Aff_F29G9.3 P W All gene names: aps-1; apt-2; F29G9.3; 5G505; CE09797; NM_072158; WBGene00000159; WP:CE09797 WormBase description: The apt-2 gene encodes an adaptin: specifically, it encodes an ortholog of the sigma1 subunit of adaptor protein complex 1 (AP-1). WormBase CDS description: clathrin coat assembly protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F30A10.6 Aff_F30A10.6 P W All gene names: F30A10.6; 1K67; CE09807; WBGene00009264; WP:CE09807 WormBase description: Yeast recessive suppressor RSD1 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster E,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F31C3.5 Aff_F31C3.5 P W All gene names: F31C3.5; 1P647; CE17734; WBGene00009287; WP:CE17734
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, list of                             
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F31D4.3 Aff_F31D4.3 P W All gene names: fkb-6; F31D4.3; F31D4.3.1; F31D4.3.2; 5V317; CE15929; NM_075625; WBGene00001431; WP:CE15929 WormBase description: FKBP-type peptidyl-prolyl cis-trans isomerases
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F32B6.3 Aff_F32B6.3 P W All gene names: F32B6.3; 4K646; CE35518; WBGene00009320; WP:CE35518 WormBase description: Human HPRP18 protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F32D1.1 Aff_F32D1.1 P W All gene names: figl-1; F32D1.1; 5E820; CE09865; WBGene00017981; WP:CE09865 WormBase description: F32D1.1 encodes an homolog of human SPASTIN (OMIM:604277, mutated in spastic paraplegia), FIDGETIN (OMIM:605295, mutated in fidget mice), and FIDGETIN-LIKE-1, and of Drosophila SPASTIN; recombinant F32D1.1 protein has N-ethylmaleimide-sensitive ATPase activity in vitro, which is strongly dependent on the C368 residue immediately C-terminal to its Walker A motif; F32D1.1 is required for persistence of the germline in RNAi assays. WormBase CDS description: ATPase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

F32D8.6 Aff_F32D8.6 P W All gene names: emo-1; oar-1; F32D8.6; F32D8.6.1; F32D8.6.2; 5L376; CE05785; NM_073377; WBGene00001303; WP:CE05785 WormBase description: emo-1 encodes an ortholog of S. cerevisiae Sec61p gamma subunit, which is required for translocation of secreted and membrane proteins into the endoplasmic reticulum; EMO-1 is required for oogenesis and ovulation. WormBase CDS description: protein transport protein SEC61 gamma subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F33H2.2 Aff_F33H2.2 P W All gene names: F33H2.2; 1P619; CE17765; WBGene00009366; WP:CE17765
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Wang et al 2003  S5                               
                                              genes common to feeding ANOVA, Wang et al 2003  S3                                 
                                              genes pass one-way ANOVA                                                           

F35D11.4 Aff_F35D11.4 P W All gene names: F35D11.4; 2E893; CE32648; WBGene00018045; WP:CE32648
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S8 SAGE genes in the dauer exit, Wang et al                               
                                              2003  S4 Climbing, Wang et al 2003  S7 SAGE genes in                               
                                              the dataset, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

F35D11.5 Aff_F35D11.5 P W All gene names: F35D11.5; F35D11.5.1; F35D11.5.2; 2E892; CE29789; WBGene00018046; WP:CE29789
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F35D2.3 Aff_F35D2.3 P W All gene names: F35D2.3; 2H861; CE31804; WBGene00018041; WP:CE31804
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, PAL-1 target genes,                             
                                              Jones et al 2001  Non dauer genes P<0.05                                           

F35G12.12 Aff_F35G12.12 P W All gene names: F35G12.12; F35G12.12.1; F35G12.12.2; 3F673; CE31499; WBGene00009445; WP:CE31499
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Lund et al 2002  Fig1                                          
                                              aging-regulated genes, Reinke et al 2004, list of genes                            
                                              in cluster order, Reinke et al 2004, intrinsic, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F35G12.6 Aff_F35G12.6 P W All gene names: mab-21; F35G12.6; 3F691; CE32651; NM_065539; WBGene00003112; WP:CE32651 WormBase description: mab-21 encodes a novel protein that is a member of a highly conserved family of proteins with Drosophila and vertebrate orthologs; MAB-21 is cell-autonomously required for specifying the identity of sensory ray 6 in the male tail, and also for backward locomotion, normal body morphology, fecundity, and embryonic morphogenesis; MAB-21 expression begins in embryonic hypodermal cells and continues in larval and adult animals in hypodermis, anterior and ventral cord neurons, some body wall muscles, and ray cells.
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster B,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Early genes, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

F35H10.6 Aff_F35H10.6 P W All gene names: F35H10.6; 4J65; CE38515; WBGene00018071; WP:CE38515
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol, ViswanathanM et al 2005 S2 Resveratrol                                
                                              regulate WT                                                                        

F35H10.7 Aff_F35H10.7 P W All gene names: F35H10.7; 4J63; CE04507; WBGene00018072; WP:CE04507
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F36A2.8 Aff_F36A2.8 P W All gene names: F36A2.8; 1J389; CE32406; WBGene00009455; WP:CE32406 WormBase description: Drosophila sex-regulated protein janus like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F36D1.1 Aff_F36D1.1 P W All gene names: F36D1.1; 1L870; CE19832; WBGene00009461; WP:CE19832
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F36D4.2 Aff_F36D4.2 P W All gene names: F36D4.2; 5J881; CE07190; WBGene00018088; WP:CE07190 WormBase description: synbindin TRS23 family
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F36H1.1 Aff_F36H1.1 P W All gene names: fkb-1; F36H1.1; 4L801; CE05813; NM_069655; WBGene00001426; WP:CE05813 WormBase description: fkb-1 encodes a homolog of mouse FK506-binding protein 2. WormBase CDS description: FK506-binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b others,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F37C12.2 Aff_F37C12.2 P W All gene names: F37C12.2; 3I275; CE00741; WBGene00018150; WP:CE00741
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta induced,                                
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F37F2.2 Aff_F37F2.2 P W All gene names: F37F2.2; 1B916; CE32185; WBGene00018159; WP:CE32185
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F38A5.1 Aff_F38A5.1 P W All gene names: F38A5.1; 4H346; CE10028; CE33641; WBGene00018160; WP:CE10028; WP:CE33641
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

F38E1.9 Aff_F38E1.9 P W All gene names: F38E1.9; 5I838; CE04527; WBGene00018181; WP:CE04527
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

F38H4.10 Aff_F38H4.10 P W All gene names: F38H4.10; 4M625; CE32887; WBGene00009551; WP:CE32887 WormBase description: Yeast hypothetical protein YIK6 like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, list of genes in cluster E, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F38H4.8 Aff_F38H4.8 P W All gene names: ech-2; F38H4.8; 4M616; CE17808; NM_069845; WBGene00001151; WP:CE17808 WormBase description: enoyl-CoA hydratase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

F39B2.4 Aff_F39B2.4 P W All gene names: mdt-23; sur-2; F39B2.4; 1P370; CE28023; CE28024; NM_061174; WBGene00006349; WP:CE28023; WP:CE28024 WormBase description: SUR-2 PROTEIN
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F39B2.5 Aff_F39B2.5 P W All gene names: F39B2.5; F39B2.5.1; F39B2.5.2; 1P354; CE34485; WBGene00009556; WP:CE34485 WormBase description: Src homology domain 2
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Romagnolo et al                            
                                              2002  Fig3b signaling                                                              

F40F9.7 Aff_F40F9.7 P W All gene names: F40F9.7; F40F9.7a.1; F40F9.7a.2; F40F9.7b.1; F40F9.7b.2; F40F9.7b.3; F40F9.7b.4; 5K213; CE05856; CE33580; WBGene00009584; WP:CE05856; WP:CE33580
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F40G9.11 Aff_F40G9.11 P W All gene names: mxl-2; F40G9.11; 3A804; CE19858; NM_064772; WBGene00003510; WP:CE19858
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, Reinke et al 2004, list of                              
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F40G9.2 Aff_F40G9.2 P W All gene names: F40G9.2; 3A809; CE19849; WBGene00018240; WP:CE19849
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F41E6.9 Aff_F41E6.9 P W All gene names: F41E6.9; 5J86; CE10260; WBGene00018290; WP:CE10260
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F41H10.3 Aff_F41H10.3 P W All gene names: F41H10.3; 4G139; CE10276; CE31694; WBGene00018316; WP:CE10276; WP:CE31694
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F41H10.6 Aff_Y4C6B.A P W All gene names: F41H10.6; 4G122; CE20772; CE25887; WBGene00018319; WP:CE20772; WP:CE25887
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

F42H10.7 Aff_F42H10.7 P W All gene names: F42H10.7; 3J578; CE00169; CE37109; WBGene00018371; WP:CE00169; WP:CE37109
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order, Reinke et al 2004, intrinsic, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

F42H11.2 Aff_F42H11.2 P W All gene names: lem-3; F42H11.2; F42H11.2.1; F42H11.2.2; 1K156; CE10332; NM_060138; WBGene00002276; WP:CE10332 WormBase description: ankyrin domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, GO                              
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F43G6.1 Aff_F43G6.1 P W All gene names: dna-2; F43G6.1; 2M71; CE02219; CE23725; NM_064114; NM_064115; WBGene00001016; WP:CE02219; WP:CE23725 WormBase description: dna-2 encodes the C. elegans ortholog of the yeast and vertebrate Dna2 replication helicases; by homology, DNA-2 is predicted to function as an endonuclease and an ATP-dependent helicase that is involved in DNA replication and repair; in C. elegans, DNA-2 activity is required maternally and zygotically to maintain normal rates of cell division and for proper germ-line, embryonic, and larval development; DNA-2 activity is temperature-sensitive: animals lacking DNA-2 at 16 degrees Celsius (C) are less severely affected than those at 20 or 25 degrees C; in the hermaphrodite gonad, DNA-2 localizes to nuclei of germ cells and developing oocytes, and expression continues in embryos up to the comma stage; DNA-2 then reappears at the L3 larval stage, and in L3 and L4 larvae is visible in the proliferating somatic cells of the uterus and spermatheca.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F43G9.12 Aff_F43G9.12 P W All gene names: F43G9.12; 1J219; CE17822; WBGene00009672; WP:CE17822 WormBase description: Human GC-rich sequence DNA-binding factor (GCF) like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, list of genes in cluster F, Reinke et al 2004, wt                            
                                              vs glp-4 enriched genes, Reinke et al 2004, list of                                
                                              genes in cluster order, Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen                                                               

F43G9.4 Aff_F43G9.4 P W All gene names: F43G9.4; 1J184; CE10360; WBGene00009667; WP:CE10360
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F44B9.5 Aff_F44B9.5 P W All gene names: F44B9.5; F44B9.5.1; F44B9.5.2; 3J104; CE24973; WBGene00018408; WP:CE24973
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F44E2.8 Aff_F44E2.8 P W All gene names: F44E2.8; 3J938; CE32420; WBGene00018421; WP:CE32420
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004,                                     
                                              oogenesis enriched genes, Reinke et al 2004, wt males                              
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F44E7.9 Aff_F44E7.9 P W All gene names: F44E7.9; 5G271; CE10396; WBGene00018431; WP:CE10396
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

F45E12.5 Aff_F45E12.4 P W All gene names: F45E12.5; F45E12.5b.1; F45E12.5b.2; 2H598; CE02741; CE32049; WBGene00018475; WP:CE02741; WP:CE32049
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F45E4.2 Aff_F45E4.2 P W All gene names: plp-1; F45E4.2; F45E4.2.1; F45E4.2.2; 4I399; CE10494; NM_068840; WBGene00004046; WP:CE10494 WormBase description: plp-1 encodes a protein containing three PUR repeats that are predicted to bind DNA/RNA and has similarity to the mammalian transcription factor pur alpha, and is required for embryonic development, development of the pharynx, and affects formation of the intestine; interacts with an Lef-1 site within the end-1 promoter and binding is regulated by phosphorylation
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, PAL-1 target genes,                             
                                              Kwon et al 2004 T1 late-induction Ethanol-response,                                
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Romagnolo et al 2002  Fig3b TF,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F46B6.6 Aff_F46B6.6 P W All gene names: F46B6.6; 5K264; CE26974; WBGene00009771; WP:CE26974 WormBase description: initiation factor IF-2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

F46C5.9 Aff_F46C5.9 P W All gene names: F46C5.9; 2J100; CE10584; WBGene00009784; WP:CE10584 WormBase description: G-protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F46E10.10 Aff_F46E10.D P W All gene names: F46E10.10; F46E10.10b.1; F46E10.10b.2; F46E10.10c.1; F46E10.10c.2; F46E10.D; F46E10.I; 5G996; CE20820; CE33096; CE33097; WBGene00018491; WP:CE20820; WP:CE33096; WP:CE33097 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F46F11.5 Aff_F46F11.5 P W All gene names: vha-10; F46F11.5; F46F11.5.1; F46F11.5.2; F46F11.5.3; 1G178; CE10604; NM_059240; WBGene00006919; WP:CE10604 WormBase description: vacuolar ATPase G subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F48B9.8 Aff_F48B9.8 P W All gene names: F48B9.8; CE04616; WBGene00018593; WP:CE04616; XC790
F48C1.6 Aff_F48C1.6 P W All gene names: F48C1.6; 1F886; CE10742; WBGene00018599; WP:CE10742
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F49C12.11 Aff_F49C12.11 P W All gene names: F49C12.11; F49C12.11.1; F49C12.11.2; 4K83; CE03371; WBGene00009880; WP:CE03371
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F49C12.12 Aff_F49C12.12 P W All gene names: phi-62; F49C12.12; F49C12.12.1; F49C12.12.2; 4K84; CE03372; WBGene00009881; WP:CE03372
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F49C12.9 Aff_F49C12.9 P W All gene names: F49C12.9; 4K80; CE10780; WBGene00009878; WP:CE10780
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

F49E7.1 Aff_C05D9.6 P W All gene names: rme-6; F49E7.1; CE26468; CE38712; WBGene00004377; WBGene00018633; WP:CE26468; WP:CE38712; XB721 WormBase description: The primary phenotype of rme-6 animals is an accumulation of secreted GFP in the pseudocoelom, suggesting a decrease in, or the absence of, endocytosis in coelomocytes.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F52A8.5 Aff_F52A8.5 P W All gene names: F52A8.5; F52A8.5.1; F52A8.5.2; 1H922; CE05912; WBGene00009918; WP:CE05912 WormBase description: F52A8.5 is orthologous to the human gene GLYCINE CLEAVAGE SYSTEM PROTEIN H (GCSH; OMIM:238330), which when mutated leads to glycine encephalopathy. WormBase CDS description: glycine cleavage system H protein like
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

F52H2.7 Aff_F52H2.7 P W All gene names: F52H2.7; CE31179; WBGene00018719; WP:CE31179; XD186
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol                                                                 

F52H3.2 Aff_F52H3.2 P W All gene names: F52H3.2; 2K322; CE03398; WBGene00009944; WP:CE03398 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: glucose inhibited division protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes, Reinke et al 2004, wt herm vs                            
                                              wt male enriched gen                                                               

F53A2.4 Aff_F53A2.4 P W All gene names: nud-1; F53A2.4; 3O429; CE16096; NM_067348; WBGene00003829; WP:CE16096 WormBase description: nud-1 encodes the C. elegans ortholog of the Aspergillus nidulans nudC, which mediates nuclear migration along Aspergillus hyphae.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              oogenesis enriched genes, Reinke et al 2004, wt herm vs                            
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F53F4.3 Aff_F53F4.3 P W All gene names: F53F4.3; 5O73; CE10958; WBGene00009987; WP:CE10958 WormBase description: S.pombe hypothetical protein SPAC4G9.01 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster E                               

F54C8.3 Aff_F54C8.3 P W All gene names: apc-4; emb-30; F54C8.3; 3K526; CE32676; NM_066673; WBGene00001284; WP:CE32676 WormBase description: emb-30 encodes an anaphase-promoting complex/cyclosome (APC/C) component orthologous to mammalian APC-4 and Schizosaccharomyces pombe Lid1; EMB-30 is required for the metaphase-to-anaphase transition during meiosis and mitosis, for establishing anterior-posterior polarity in the early embryo, and for proper localization of germline granules and the maternally provided PAR-2 and PAR-3 proteins.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F54C8.4 Aff_F54C8.4 P W All gene names: F54C8.4; 3K532; CE00190; WBGene00010037; WP:CE00190 WormBase description: Protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes, Reinke et al 2004, wt herm vs                            
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F54C9.9 Aff_F54C9.9 P W All gene names: F54C9.9; 2I871; CE20865; WBGene00010044; WP:CE20865
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen                                           

F54D5.12 Aff_Y62F5A.B P W All gene names: F54D5.12; F54D5.12.1; F54D5.12.2; 2L830; CE26814; WBGene00010055; WP:CE26814 WormBase description: yeast hyothetical YET1 like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F54D5.7 Aff_F54D5.7 P W All gene names: F54D5.7; F54D5.7.1; F54D5.7.2; CE03411; NM_064068; WBGene00010052; WP:CE03411 WormBase description: The F54D5.7 gene encodes an ortholog of the human gene GLUTARYL-COENZYME A DEHYDROGENASE (GCDH), which when mutated leads to glutaricaciduria type I (OMIM:231670). WormBase CDS description: acyl-CoA dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F54D8.3 Aff_F54D8.3 P W All gene names: alh-1; F54D8.3; F54D8.3a.1; F54D8.3a.2; F54D8.3b.1; F54D8.3b.2; F54D8.3b.3; 3G169; CE29809; CE32434; NM_065680; NM_181921; WBGene00000107; WP:CE29809; WP:CE32434 WormBase description: alh-1 is orthologous to the human gene ALDEHYDE DEHYDROGENASE 2, MITOCHONDRIAL (ALDH2; OMIM:100650), in which a polymorphism can lead to acute ethanol intolerance.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F54E12.2 Aff_F54E12.2 P W All gene names: F54E12.2; F54E12.2.1; F54E12.2.2; 4M98; CE11083; WBGene00010061; WP:CE11083 WormBase description: helicase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F54E7.1 Aff_F54E7.1 P W All gene names: F54E7.1; 3G771; CE01312; WBGene00018827; WP:CE01312
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Transporters, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

F54E7.3 Aff_F54E7.3 P W All gene names: par-3; F54E7.3; 3G765; CE28449; CE28450; CE39941; NM_065816; WBGene00003918; WP:CE28449; WP:CE28450; WP:CE39941 WormBase description: par-3 encodes a PDZ domain-containing protein orthologous to mammalian atypical PKC isotype-specific interacting protein (ASIP) and Drosophila Bazooka; PAR-3 is required maternally for polarization of the zygote along the anterior-posterior (A-P) axis; PAR-3, PAR-6, and PKC-3 form a complex that localizes to the anterior cytoplasmic cortex of the one- and two-cell embryo; this localization is regulated spatially by PAR-2, which segregates to the posterior cortex.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen                                           

F54G8.3 Aff_F54G8.3 P W All gene names: ina-1; F54G8.3; 3K258; CE00205; NM_066631; WBGene00002081; WP:CE00205 WormBase description: Integrin alpha chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F55A11.3 Aff_F55A11.3 P W All gene names: F55A11.3; F55A11.3.1; F55A11.3.2; 5M249; CE05945; WBGene00010076; WP:CE05945 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

F55A12.2 Aff_F55A12.2 P W All gene names: F55A12.2; F55A12.2d.1; F55A12.2d.2; 1F933; CE29396; CE30540; CE34317; CE34318; WBGene00018863; WP:CE29396; WP:CE30540; WP:CE34317; WP:CE34318
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F55C5.5 Aff_F55C5.5 P W All gene names: EF-TS; tsfm-1; F55C5.5; 5M750; CE11158; WBGene00010094; WP:CE11158 WormBase description: F55C5.5 encodes a translational elongation factor Ts (EF-Ts) that binds two different EF-Tu proteins (EF-TU1/Y71H2AM.23 and EF-TU2/C43E11.4) in vitro, stimulating guanine-nucleotide exchange and mRNA translation; F55C5.5 is predicted to be mitochondrial and has a putative N-terminal transit peptide sequence; F55C5.5 is required in mass RNAi assays for normally rapid growth and for maintenance of the germline. WormBase CDS description: mitochondrial elongation factor TS
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, list of genes in cluster C, Reinke et al                               
                                              2004, GO categories, Wang et al 2003  S3  genes pass                               
                                              one-way ANOVA, Wang et al 2003  S4 Early genes, Wang et                            
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

F55F8.5 Aff_F55F8.5 P W All gene names: tag-345; F55F8.5; F55F8.5.1; F55F8.5.2; 1G224; CE11196; WBGene00018893; WP:CE11196
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated, Wang et al 2003  S4 Early genes,                            
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

F55H2.2 Aff_F55H2.2 P W All gene names: vha-14; F55H2.2; F55H2.2.1; F55H2.2.2; 3K599; CE00209; NM_066693; WBGene00010130; WP:CE00209 WormBase description: Membrane-associated atpase gamma chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F56B3.8 Aff_F56B3.8 P W All gene names: F56B3.8; 4B529; CE34320; WBGene00018932; WP:CE34320
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Wang et al 2003  S4 Early genes,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

F56C11.3 Aff_F56C11.3 P W All gene names: F56C11.3; 1A656; CE17903; WBGene00018955; WP:CE17903
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F56D1.3 Aff_F56D1.3 P W All gene names: F56D1.3; F56D1.3.1; F56D1.3.2; CE29407; WBGene00018961; WP:CE29407 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F56G4.5 Aff_Y53H1C.A P W All gene names: F56G4.5; F56G4.5.1; F56G4.5.2; 1L979; CE23786; WBGene00010160; WP:CE23786 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Thioredoxins
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

F57B10.5 Aff_F57B10.5 P W All gene names: F57B10.5; 1H139; CE11306; WBGene00019003; WP:CE11306
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

F57B9.4 Aff_F57B9.4 P W All gene names: coq-2; F57B9.4; 3I27; CE28469; CE28470; CE32444; CE32445; CE32446; NM_066111; NM_066112; NM_181953; NM_181954; WBGene00000762; WP:CE28469; WP:CE28470; WP:CE32444; WP:CE32445; WP:CE32446 WormBase description: coq-2 encodes a para-hydroxybenzoate-polyprenyl transferase (UbiA prenyltransferase) whose yeast ortholog is mitochondrial.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F57B9.6 Aff_F57B9.6 P W All gene names: inf-1; F57B9.6; F57B9.6a.1; F57B9.6a.2; 3I21; CE01341; CE38524; Ce1F; CeIF; NM_066108; WBGene00002083; WP:CE01341; WP:CE38524 WormBase description: inf-1 encodes a protein with high similarity to eukaryotic initiation factor 4A.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b Protein Synthesis,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F57B9.7 Aff_T07E3.7 P W All gene names: F57B9.7; 3I14; CE31011; CE31012; WBGene00018998; WP:CE31011; WP:CE31012
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, mixed oogenesis soma, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated                                                                  

F58A4.8 Aff_F58A4.8 P W All gene names: sas-3; tbg-1; F58A4.8; F58A4.8.1; F58A4.8.2; 3K716; CE00224; NM_066730; TUBG; WBGene00006540; WP:CE00224 WormBase description: tbg-1 encodes gamma-tubulin; in C. elegans, tbg-1 activity is essential and is required for normal bipolar spindle assembly and function, as well as the fast phase of female pronuclear migration following fertilization; while tbg-1 is required for proper organization and function of kinetochore and interpolar microtubules, it does not appear to be absolutely required for microtubule nucleation and growth; TBG-1 localizes to centrosomes in both interphase and mitotic cells, exhibiting a dynamic behavior during mitosis that differs between anterior and posterior centrosomes. WormBase CDS description: Gamma-like tubulin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F58B3.5 Aff_F58B3.5 P W All gene names: mrs-1; F58B3.5; 4M398; CE06007; NM_069795; WBGene00003415; WP:CE06007 WormBase description: mrs-1 encodes a predicted cytoplasmic methionyl-tRNA synthetase (MetRS), a class I aminoacyl-tRNA synthetase that catalyzes the attachment of methionine to its cognate tRNA and is thus required for protein biosynthesis; MRS-1 is essential for embryogenesis and required also for a normal rate of postembryonic growth. WormBase CDS description: methionyl-tRNA synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, mixed oogenesis soma, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

F58E10.4 Aff_F58E10.4 P W All gene names: aip-1; F58E10.4; 5O493; CE18786; NM_074078; WBGene00000097; WP:CE18786 WormBase description: aip-1 encodes an AN-1-like zinc finger-containing protein homologous to arsenite-inducible RNA-associated protein (AIRAP), conserved among C. elegans, Drosophila, and mammals; like AIRAP itself, AIP-1 protects cells from arsenite toxicity; AIP-1 is a predicted RNA binding protein that may function in ubiquitin-mediated proteolysis following aresenite treatment; AIP-1 does not appear to be essential for viability, but is expressed at high levels in hypodermal and intestinal cells following such treatment.
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, McCarroll et al 2004  SFig1-4 conserved w/                            
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Zhang et al 2002, T1 mec-3 dependent genes                                         

F58G11.6 Aff_F58G11.6 P W All gene names: F58G11.6; 5O161; CE11410; WBGene00010283; WP:CE11410
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen                                           

F58H1.1 Aff_F58H1.1 P W All gene names: F58H1.1; 5M408; CE06025; CE39509; WBGene00010284; WP:CE06025; WP:CE39509 WormBase description: alpha-mannosidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F59A2.3 Aff_F59A2.3 P W All gene names: F59A2.3; F59A2.3.1; F59A2.3.2; 3E487; CE17940; WBGene00010303; WP:CE17940 WormBase description: Splicing factor-associated 32K chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster C, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S4 genes pass two-wayANOVA P0                                                     

F59B8.2 Aff_F59B8.2 P W All gene names: F59B8.2; F59B8.2.1; F59B8.2.2; 4K204; CE03436; WBGene00010317; WP:CE03436 WormBase description: isocitrate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, Reinke et al 2004, herm soma                            
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

F59C6.4 Aff_F59C6.4 P W All gene names: F59C6.4; 1L95; CE11462; WBGene00010325; WP:CE11462
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Reinke et al 2004,                                
                                              list of genes in cluster E, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated                                                                  

F59E12.10 Aff_F59E12.10 P W All gene names: ddl-1; F59E12.10; 2F936; CE11536; WBGene00019125; WP:CE11536
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E                                                                          

F59F4.4 Aff_F59F4.4 P W All gene names: acl-1; F59F4.4; CE11552; NM_078205; WBGene00010339; WP:CE11552; XQ469 WormBase description: 1-acyl-SN-glycerol-3-phosphate acyltransferase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Murphy et al 2003  Fig2 Class1 elongate                                    
                                              lifespan, Reinke et al 2004, fem3 enriched genes,                                  
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              GO categories, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

H01M10.1 Aff_H01M10.1 P W All gene names: H01M10.1; CE19912; WBGene00019143; WP:CE19912; XD194
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

H12D21.7 Aff_H12D21.7 P W All gene names: H12D21.7; 5P379; CE36178; WBGene00010383; WP:CE36178
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S6 removed genes of contamination                                         

H13N06.4 Aff_H13N06.4 P W All gene names: H13N06.4; CE18814; CE38383; WBGene00010397; WP:CE18814; WP:CE38383; XQ117 WormBase description: H13N06.4 is orthologous to the human gene UNKNOWN (PROTEIN FOR MGC:12715) (SUOX; OMIM:602216), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

H19N07.3 Aff_H19N07.3 P W All gene names: H19N07.3; H19N07.3.1; H19N07.3.2; 5L598; CE16184; WBGene00010407; WP:CE16184
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

H20J04.5 Aff_H20J04_717.C P W All gene names: tag-355; H20J04.5; H20J04.5.1; H20J04.5.2; H20J04.5.3; 2E617; CE23815; WBGene00019220; WP:CE23815
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K01A6.2 Aff_K01A6.1 P W All gene names: magi-1; K01A6.2; 4M493; CE37387; WBGene00010444; WP:CE37387 WormBase description: membrane-associated guanylate kinase homolog (MAGUK)
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

K01C8.6 Aff_K01C8.6 P W All gene names: K01C8.6; 2I566; CE02267; WBGene00010458; WP:CE02267 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

K01C8.7 Aff_K01C8.7 P W All gene names: K01C8.7; 2I565; CE02268; WBGene00010459; WP:CE02268 WormBase description: Mitochondrial carrier proteins
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

K01D12.12 Aff_K01D12.12 P W All gene names: cdr-6; K01D12.12; 5M892; CE06051; NM_073712; WBGene00010471; WP:CE06051 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

K01G5.1 Aff_K01G5.1 P W All gene names: tag-331; K01G5.1; 3K846; 3L846; CE26718; WBGene00010476; WP:CE26718 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E                                                              

K02B12.3 Aff_K02B12.3 P W All gene names: phi-15; K02B12.3; K02B12.3.1; K02B12.3.2; 1J86; CE32461; WBGene00010496; WP:CE32461 WormBase description: WD domain, G-beta repeat
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

K02B2.1 Aff_K02B2.1 P W All gene names: K02B2.1; 4G707; CE30082; WBGene00019295; WP:CE30082 WormBase description: 6-phosphofructo-2-kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 daf-16 Resveratrol                                                        

K02D10.1 Aff_K02D10.1 P W All gene names: K02D10.1; K02D10.1b.1; K02D10.1b.2; 3J865; CE17151; CE29423; WBGene00019301; WP:CE17151; WP:CE29423 WormBase description: 4-NITROPHENYLPHOSPHATASE
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

K04A8.6 Aff_F46E10.A P W All gene names: F46E10.A; K04A8.6; 5H14; CE27388; WBGene00019377; WP:CE27388 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster B, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

K04F10.3 Aff_K04F10.3 P W All gene names: K04F10.3; 1G935; CE28586; WBGene00019396; WP:CE28586
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

K04G2.6 Aff_K04G2.6 P W All gene names: K04G2.6; K04G2.6.1; K04G2.6.2; 1I619; CE06100; WBGene00010565; WP:CE06100
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, ViswanathanM et al 2005  S2                               
                                              sir-2.1 regulated                                                                  

K04G7.4 Aff_K04G7.4 P W All gene names: nuo-4; K04G7.4; K04G7.4a.1; K04G7.4a.2; K04G7.4a.3; K04G7.4a.4; K04G7.4b.1; K04G7.4b.2; 3I246; CE01361; CE31031; WBGene00019401; WP:CE01361; WP:CE31031 WormBase description: NADH dehydrogenase
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S4 Climbing, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

K05C4.2 Aff_K05C4.2 P W All gene names: K05C4.2; K05C4.2.1; K05C4.2.2; 1P312; CE19970; WBGene00010579; WP:CE19970
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

K05C4.6 Aff_K05C4.6 P W All gene names: hmp-2; K05C4.6; KO5C4.6; 1P333; CE19974; NM_061165; WBGene00001979; WP:CE19974 WormBase description: hmp-2 encodes a beta-catenin; HMP-2 activity is required during embryonic development for cell adhesion at adherens junctions, cell migration, and body morphogenesis; as a beta-catenin, HMP-2 likely functions solely as part of a cadherin-catenin complex, as in yeast two-hybrid assays, HMP-2 is the only C. elegans beta-catenin that binds HMP-1/alpha-catenin and HMR-1/cadherin; additionally, in the embryo, HMP-2 co-localizes to sites of epithelial cell contacts with HMP-1 and HMR-1/cadherin; however, despite its normal role in embryonic cell adhesion, HMP-2 can activate transcription and when overexpressed in vivo, can partially rescue vulval defects produced by loss of BAR-1/beta-catenin, suggesting that HMP-2 has retained the ability to interact with the Wnt signaling pathway. WormBase CDS description: Armadillo/beta-catenin-like repeats (4 domains)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

K07A1.9 Aff_K07A1.9 P W All gene names: K07A1.9; 1K188; CE32465; CE32466; CE32467; WBGene00010615; WP:CE32465; WP:CE32466; WP:CE32467 WormBase description: arginyl-tRNA protein transferase like (truncated)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, list of genes in cluster E,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K07A3.1 Aff_K07A3_50.C P W All gene names: fbp-1; K07A3.1; K07A3.1.1; K07A3.1.2; K07A3.1.3; K07A3.B; 1D150; CE21023; NM_058603; WBGene00001404; WP:CE21023; fbp WormBase description: fbp-1 encodes fructose 1,6-bisphosphatase, a gluconeogenic enzyme that catalyzes the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate and inorganic phosphate in a reaction that reverses the third enzymatic step of glycolysis; in C. elegans, loss of fbp-1 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities; FBP-1 is orthologous to human FBP1 (OMIM:229700, mutated in FBP deficiency). WormBase CDS description: fructose-bisphosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

K07B1.4 Aff_K07B1.4 P W All gene names: K07B1.4; K07B1.4b.1; K07B1.4b.2; 5J811; CE11882; CE27391; WBGene00019464; WP:CE11882; WP:CE27391
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, McElwee et al 2003  T1 targets of daf-16,                                 
                                              Murphy et al 2003  Fig2 Class1 elongate lifespan,                                  
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K07B1.7 Aff_K07B1.7 P W All gene names: K07B1.7; 5J826; CE29509; CE38846; WBGene00019467; WP:CE29509; WP:CE38846
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, intrinsic,                                  
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K07C5.1 Aff_K07C5.1 P W All gene names: arx-2; K07C5.1; 5K816; CE06111; NM_073256; WBGene00000200; WP:CE06111 WormBase description: actin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

K07G5.2 Aff_K07G5.2 P W All gene names: xpa-1; K07G5.2; 1H737; CE06130; NM_059624; WBGene00006963; WP:CE06130 WormBase description: xpa-1 encodes an ortholog of human XPA, the xeroderma pigmentosum complementation group A protein (OMIM:278700, mutations are associated with sensitivity to ultraviolet light and carcinomata at an early age); by homology, XPA-1 is predicted to function as a DNA-binding protein that is required for nucleotide excision repair of damaged DNA; in C. elegans, loss of xpa-1 activity via mutation or RNA-mediated interference (RNAi) results in increased sensitivity to UV irradiation at all stages of development; xpa-1 mRNA is detected in eggs and mixed stage populations. WormBase CDS description: DNA-repair protein XP-A homolog like
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2 age                                
                                              different gene, Golden et al 2004, N2 differentially                               
                                              expressed gen, McCarroll et al 2004  SFig1-4 conserved                             
                                              w/ Drosoph, Reinke et al 2004, list of genes in cluster                            
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

K07H8.1 Aff_K07H8.1 P W All gene names: K07H8.1; 4J61; CE18021; WBGene00019503; WP:CE18021
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

K07H8.3 Aff_K07H8.3 P W All gene names: K07H8.3; 4J55; CE18023; WBGene00019505; WP:CE18023
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

K08D10.4 Aff_K08D10.4 P W All gene names: rnp-2; K08D10.4; 4E937; CE28597; NM_068103; WBGene00004385; WP:CE28597 WormBase description: U1 small nuclear ribonucleoprotein A
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

K08F4.2 Aff_K08F4.2 P W All gene names: K08F4.2; 4K892; CE37535; WBGene00010677; WP:CE37535 WormBase description: RNA recognition motif. (aka RRM, RBD, or RNP domain)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

K08F9.2 Aff_K08F9.2 P W All gene names: tag-216; K08F9.2; K08F9.2.1; K08F9.2.2; K08F9.2.3; 5P616; CE11944; WBGene00010685; WP:CE11944 WormBase description: beta-transducin like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, intrinsic, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

K08H10.7 Aff_K08H10.7 P W All gene names: rde-1; K08H10.7; 5K468; CE28243; NM_171525; WBGene00004323; WP:CE28243
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

K08H10.9 Aff_K08H10.9 P W All gene names: K08H10.9; 5K473; CE18881; WBGene00010699; WP:CE18881
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

K08H2.6 Aff_K08H2.6 P W All gene names: hpl-1; K08H2.6; CE06164; NM_077798; WBGene00001995; WP:CE06164; XN865 WormBase description: The hpl-1 gene encodes a homolog of heterochromatin protein 1 (HP1) that acts to support the activity of HPL-2 in promoting germline function, but that by itself is dispensable for any obvious function in vivo. WormBase CDS description: murine modifier 2 protein like
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

K10B3.8 Aff_K10B3.8 P W All gene names: gpd-2; K10B3.8; CE07371; NM_076134; WBGene00001684; WP:CE07371; XD732 WormBase description: gpd-2 encodes one of four C. elegans glyceraldehyde-3-phosphate dehydrogenases (GAPDHs); by homology, GPD-2 is predicted to reversibly catalyze the oxidation and phosphorylation of glyceraldehyde-3-phosphate to 1,3-diphosphoglycerate during glycolysis; in C. elegans, GPD-2 and GPD-3 constitute the major GAPDH isoenzymes and are expressed at highest levels during postembryonic development, primarily in the actin-containing A and I zones of body-wall muscle; loss of gpd-2 function via RNA-mediated interference (RNAi) does not result in any abnormalities.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, Roy et al 2002  S3 muscle genes,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

K10D2.6 Aff_K10D2.6 P W All gene names: emb-8; K10D2.6; K10D2.6.1; K10D2.6.2; 3G286; CE02018; WBGene00001262; WBGene00019632; WP:CE02018 WormBase description: Uncloned locus required for embryonic viability, for the normal generation of anterior-posterior asymmetry in the early embryo, and for normal P Granule and GLP-1 asymmetry in early embryos. WormBase CDS description: NADPH-cytochrome P450
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 Cytochrome                                
                                              P450, McCarroll et al 2004  SFig5 conserved w/ yeast,                              
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph                                 

K11B4.2 Aff_K11B4.2 P W All gene names: K11B4.2; 1P391; CE23868; WBGene00010767; WP:CE23868
K11G12.5 Aff_K11G12.5 P W All gene names: K11G12.5; CE02827; WBGene00019656; WP:CE02827; XH342 WormBase description: mitochondrial 2-oxoglutartae
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

K11H12.1 Aff_K11H12.1 P W All gene names: K11H12.1; 4B404; CE12146; WBGene00019658; WP:CE12146 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: DNA-binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

K11H12.8 Aff_K11H12.8 P W All gene names: K11H12.8; 4B411; CE12160; CE31566; WBGene00019664; WP:CE12160; WP:CE31566
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

K11H3.1 Aff_K11H3.1 P W All gene names: K11H3.1; K11H3.1b.1; K11H3.1b.2; 3K944; CE31850; CE31851; WBGene00010778; WP:CE31850; WP:CE31851 WormBase description: K11H3.1 encodes one of two C. elegans glycerol 3-phosphate dehydrogenases; although loss of K11H3.1 activity via large-scale RNAi screens results in no obvious defects, expression of a K11H3.1 cDNA in Saccharomyces cerevisiae hog1 mutants is able to rescue the high osmolarity-sensitive growth phenotype of these mutants, suggesting that K11H3.1 encodes a functional glycerol 3-phosphate dehydrogenase.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

K12H4.4 Aff_K12H4.4 P W All gene names: phi-20; K12H4.4; K12H4.4.1; K12H4.4.2; 3J133; CE00269; WBGene00019679; WP:CE00269 WormBase description: Signal peptidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b secretion,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

M01B12.3 Aff_M01B12.3 P W All gene names: arx-7; M01B12.3; 1D638; CE18061; NM_058698; WBGene00000205; WP:CE18061
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

M01D7.4 Aff_M01D7.4 P W All gene names: tag-96; M01D7.4; 1C323; CE36705; WBGene00006461; WBGene00019707; WP:CE36705 WormBase description: galactokinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

M01E11.1 Aff_M01E11.1 P W All gene names: M01E11.1; 1G151; CE12288; WBGene00019710; WP:CE12288
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

M01F1.6 Aff_M01F1.6 P W All gene names: M01F1.6; M01F1.6.1; M01F1.6.2; 3E601; CE37982; WBGene00010812; WP:CE37982
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

M02B7.2 Aff_M02B7.2 P W All gene names: M02B7.2; 4E569; CE12322; WBGene00019724; WP:CE12322
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, wt herm vs wt male                            
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

M03F4.7 Aff_M03F4.7 P W All gene names: M03F4.7; CE12368; CE34060; WBGene00019760; WP:CE12368; WP:CE34060; XF588 WormBase description: calcium binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class2                               
                                              shorten lifespan, Wang et al 2003  S4 Climbing, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Zhang et al 2002, T1                                
                                              mec-3 dependent genes                                                              

M04B2.3 Aff_M04B2.3 P W All gene names: gfl-1; M04B2.3; 4M287; CE12388; NM_069771; WBGene00001585; WP:CE12388 WormBase description: gfl-1 encodes an ortholog of human GLIOMA-AMPLIFIED SEQUENCE-41 (GAS41; OMIM:602116, found in increased copy number in low-grade glioma); loss of GLF-1, which is predicted to associate with chromatin, results in potent suppression of the RNA interference (RNAi) mechanism; GLF-1 is also similar to the transcription factors (yeast and human) AF-9 and human ENL, and thus may represent a novel class of transcription factors. WormBase CDS description: Human AF-9 protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

M05D6.2 Aff_M05D6.2 P W All gene names: M05D6.2; 2I759; CE03500; WBGene00010875; WP:CE03500 WormBase description: testis-specific like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E                                                   

M142.8 Aff_M142.5 P W All gene names: M142.8; 3M25; CE37540; WBGene00043057; WP:CE37540
M176.2 Aff_M176.2 P W All gene names: M176.2; M176.2.1; M176.2.2; 2J706; CE18087; WBGene00010941; WP:CE18087 WormBase description: M176.2 is orthologous to the human gene GLUTATHIONE SYNTHETASE (GSS; OMIM:601002), which when mutated leads to 5-oxoprolinuria, or to GSS deficiency restricted to erythrocytes and associated only with hemolytic anemia. WormBase CDS description: glutathione synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, wt herm vs wt male                                    
                                              enriched gen, Wang et al 2003  S5 genes common to                                  
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

M70.4 Aff_M70.4 P W All gene names: M70.4; 4D18; CE37266; WBGene00019786; WP:CE37266 WormBase description: M70.4 is orthologous to human O-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE (FLJ20277; OMIM:606822), which when mutated leads to muscle-eye-brain disease.
M88.2 Aff_M88.2 P W All gene names: M88.2; 3F630; CE23884; WBGene00010905; WP:CE23884
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes                                        

PAR2.1 Aff_PAR2.1 P W All gene names: PAR2.1; PAR2.1.1; PAR2.1.2; 3J859; CE00768; WBGene00019800; WP:CE00768 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

R03A10.4 Aff_R03A10.4 P W All gene names: R03A10.4; R03A10.4a.1; R03A10.4a.2; R03A10.4b.1; R03A10.4b.2; CE29335; CE37983; WBGene00010984; WP:CE29335; WP:CE37983; XQ61 WormBase description: gluamine-phenylpyruvate transaminase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R05D11.6 Aff_R05D11.6 P W All gene names: R05D11.6; 1J173; CE32473; WBGene00011034; WP:CE32473
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen                                              

R05F9.6 Aff_R05F9.6 P W All gene names: R05F9.6; 2F181; CE04809; WBGene00019890; WP:CE04809 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: phosphoglucomutase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

R06C7.5 Aff_R06C7.5 P W All gene names: R06C7.5; R06C7.5b.1; R06C7.5b.2; 1H824; CE06248; CE32476; WBGene00011064; WP:CE06248; WP:CE32476 WormBase description: The R06C7.5 gene encodes an ortholog of the human gene ADSL, which when mutated leads to adenylosuccinate lyase deficiency (OMIM:103050).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

R07E4.4 Aff_R07E4.4 P W All gene names: mig-23; R07E4.4; R07E4.4.1; R07E4.4.2; CE28748; NM_076593; WBGene00003254; WP:CE28748; XG566 WormBase description: guanosine-diphosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R07E5.13 Aff_R07E5.13 P W All gene names: R07E5.13; 3F505; CE00659; WBGene00011119; WP:CE00659 WormBase description: This gene encodes a homolog of mammalian BRAIN PROTEIN 44-LIKE (BRP44L).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

R07E5.14 Aff_R07E5.14 P W All gene names: rnp-4; R07E5.14; R07E5.14.1; R07E5.14.2; 3F497; CE01044; NM_065490; WBGene00004387; WP:CE01044 WormBase description: rnp-4 encodes a putative member of the exon-exon junction complex, orthologous to Y14 in S. cerevisiae and TSUNAGI in D. melanogaster; RNP-4 is required for embryonic viability, fertility, vulval development, and cuticular integrity; however, rnp-4(RNAi) animals show no accumulation of poly(A)+ mRNA in their nuclei, indicating that RNP-4 is dispensable for mRNA export. WormBase CDS description: RNA binding domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, Reinke et al 2004, list of                              
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

R07E5.2 Aff_R07E5.2 P W All gene names: prdx-3; R07E5.2; R07E5.2.1; R07E5.2.2; 3F499; CE00657; NM_065491; WBGene00011110; WP:CE00657; ceprx1 WormBase description: Mer5 (mouse)
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2 age                                
                                              different gene, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Oxidation,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Climbing, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

R07E5.7 Aff_R07E5.7 P W All gene names: R07E5.7; R07E5.7.1; R07E5.7.2; 3F510; CE00672; WBGene00011115; WP:CE00672
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

R07H5.3 Aff_R07H5.3 P W All gene names: R07H5.3; 4L951; CE12554; CE35186; WBGene00011123; WP:CE12554; WP:CE35186
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

R08B4.3 Aff_R08B4.3 P W All gene names: R08B4.3; CE20025; WBGene00011139; WP:CE20025; XL738
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

R08D7.1 Aff_R08D7.1 P W All gene names: R08D7.1; 3K56; CE00289; WBGene00011142; WP:CE00289
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

R08D7.2 Aff_R08D7.2 P W All gene names: R08D7.2; 3K59; CE00290; WBGene00011143; WP:CE00290
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

R08D7.8 Aff_R08D7.4 P W All gene names: R08D7.8; CE33293; WBGene00011148; WP:CE33293
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen                                                                       

R09B3.1 Aff_R09B3.1 P W All gene names: exo-3; R09B3.1; 1M498; CE16306; CE38407; NM_060620; WBGene00001372; WP:CE16306; WP:CE38407 WormBase description: exo-3 encodes an ortholog of human APEX/REF1 and rat apurinic/apyrimidinic endonuclease (AP endonuclease 1); EXO-3 is implicated in a DNA damage checkpoint pathway that affects embryonic and larval viability.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

R09B3.4 Aff_R09B3.4 P W All gene names: ubc-12; R09B3.4; 1M503; CE16309; NM_060623; WBGene00006707; WP:CE16309 WormBase description: The ubc-12 gene encodes a ubiquitin-conjugating enzyme whose substrate is NED-8, and which is required for both embryogenesis and terminal hypodermal differentiation; ubc-12(RNAi) mutants either arrest during embryonic development or show pleotropic defects (e.g., vulval eversion during the L4 stage), as well as defective alae. WormBase CDS description: Ubiquitin-conjugating enzymes
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

R09F10.8 Aff_R09F10.8 P W All gene names: R09F10.8; R09F10.8.1; R09F10.8.2; CE28756; WBGene00019989; WP:CE28756; XI944
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, wt herm vs wt male                            
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

R107.7 Aff_R107.7 P W All gene names: gst-1; R107.7; R107.7.1; R107.7.2; 3K149; CE00302; NM_066605; WBGene00001749; WP:CE00302 WormBase description: gst-1 encodes a putative glutathione S-transferase with highest similarity to the pi class. WormBase CDS description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S6 removed genes of contamination                                         

R10D12.13 Aff_R10D12.13 P W All gene names: R10D12.13; 5O445; CE12696; CE23920; CE23921; WBGene00011194; WP:CE12696; WP:CE23920; WP:CE23921
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Romagnolo et al                             
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

R10E11.3 Aff_R10E11.3 P W All gene names: R10E11.3; R10E11.3a.1; R10E11.3a.2; 3K867; CE23922; CE23923; WBGene00011216; WP:CE23922; WP:CE23923 WormBase description: Ubiquitin-specifc processing protease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen                                           

R10E11.8 Aff_R10E11.8 P W All gene names: vha-1; R10E11.8; R10E11.8.1; R10E11.8.2; R10E11.8.3; 3K871; CE06291; NM_066764; WBGene00006910; WP:CE06291 WormBase description: vha-1 encodes a 16-kDa proteolipid of the vacuolar-type H+-ATPase (V-ATPase) and is required for embryogenesis and for oocyte ovulation, based on RNAi analysis; expressed in the excretory cells and the rectum of adult animals as well as in a pair of cells posterior to the anus. WormBase CDS description: ATP synthase subunit C (2 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

R10H10.6 Aff_R10H10.6 P W All gene names: R10H10.6; 4L172; CE06297; WBGene00011224; WP:CE06297 WormBase description: Yeast protein YD8419.03c like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

R119.3 Aff_R119.3 P W All gene names: R119.3; 1A848; CE28758; WBGene00020089; WP:CE28758 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

R11E3.7 Aff_R11E3.7 P W All gene names: dpf-7; R11E3.7; 4F564; CE19549; CE31721; NM_171328; NM_171329; WBGene00001060; WP:CE19549; WP:CE31721
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

R11E3.8 Aff_R11E3.8 P W All gene names: dpf-5; R11E3.8; R11E3.8.1; R11E3.8.2; R11E3.8.3; 4F568; CE29985; NM_068246; WBGene00001058; WP:CE29985 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R11H6.2 Aff_R11H6.2 P W All gene names: R11H6.2; R11H6.2.1; R11H6.2.2; 5P79; CE12772; WBGene00011250; WP:CE12772 WormBase description: Human placenta (DIFF33) protein like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

R12C12.2 Aff_R12C12.2 P W All gene names: ran-5; R12C12.2; R12C12.2.1; R12C12.2.2; 2G339; CE02847; NM_062807; WBGene00004306; WP:CE02847 WormBase description: ran-5 encodes a protein containing a RanBP1 domain, domains which are predicted to interact with Ran proteins to inhibit dissociation of GTP and to stimulate GAP-mediated GTP hydrolysis by Ran, that affects body morphology, locomotion, and embryonic viability.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

R12C12.6 Aff_R12C12.6 P W All gene names: R12C12.6; 2G336; CE02851; CE39619; WBGene00020026; WP:CE02851; WP:CE39619
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R13A5.7 Aff_R13A5.7 P W All gene names: R13A5.7; 3I656; CE30389; WBGene00020050; WP:CE30389
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R13G10.2 Aff_R13G10.2 P W All gene names: amx-1; R13G10.2; 3E915; CE25088; NM_065371; WBGene00000137; WP:CE25088 WormBase description: monoamine oxidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

R151.8 Aff_R151.8 P W All gene names: R151.8; 3I318; CE27201; WBGene00020111; WP:CE27201
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

R166.3 Aff_R166.3 P W All gene names: R166.3; 2K828; CE03582; WBGene00011303; WP:CE03582 WormBase description: The R166.3 gene encodes an unfamiliar protein, with homologs in yeast and archaea, that is orthologous to the human gene ALPORT SYNDROME, MENTAL RETARDATION, MIDFACE HYPOPLASIA, AND ELLIPTOCYTOSIS CHROMOSOMAL REGION GENE 1 (AMMECR1; OMIM:300195); AMMECR1, when mutated, may be at least partially responsible for mental retardation, midface hypoplasia, or elliptocytosis.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

R186.3 Aff_R186.3 P W All gene names: R186.3; 5N446; CE12874; WBGene00011306; WP:CE12874 WormBase description: signal recognition particle receptor beta subunit like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

R53.1 Aff_R53.1 P W All gene names: R53.1; R53.1a.1; R53.1a.2; R53.1b.1; R53.1b.2; CE02303; CE38215; WBGene00011271; WP:CE02303; WP:CE38215 WormBase description: FAD-1 like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

R53.2 Aff_R53.2 P W All gene names: R53.2; 2K254; CE03571; WBGene00011272; WP:CE03571 WormBase description: thymidylate kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

T01E8.5 Aff_T01E8.5 P W All gene names: T01E8.5; 2K534; CE18165; WBGene00011333; WP:CE18165
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

T01E8.6 Aff_T01E8.6 P W All gene names: T01E8.6; T01E8.6.1; T01E8.6.2; 2K532; CE32923; WBGene00011334; WP:CE32923 WormBase description: mitochondrial ribosomal protein S14
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

T02G5.8 Aff_T02G5.8 P W All gene names: kat-1; T02G5.8; 2H367; CE29990; NM_063054; WBGene00002183; WP:CE29990 WormBase description: kat-1 encodes a homolog of the human gene ACAT1, which when mutated leads to alpha-methylacetoaceticaciduria (OMIM:203750). WormBase CDS description: acetoacetyl-C0A thiolase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T03D8.2 Aff_T03D8.2 P W All gene names: T03D8.2; 5V309; CE18920; WBGene00011391; WP:CE18920 WormBase description: Ribosomal protein S12
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T03F1.1 Aff_T03F1.1 P W All gene names: T03F1.1; 1E443; CE13096; WBGene00020184; WP:CE13096
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Early genes,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

T03F1.3 Aff_T03F1.3 P W All gene names: T03F1.3; 1E435; CE13100; WBGene00020185; WP:CE13100 WormBase description: T03F1.3 is orthologous to the human gene PHOSPHOGLYCERETE KINASE 1 (PGK1; OMIM:311800), which when mutated leads to hemolytic anemia and neurologic disturbances. WormBase CDS description: phosphoglycerate kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

T03F6.2 Aff_T03F6.2 P W All gene names: dnj-17; T03F6.2; 3O480; CE16336; NM_067358; WBGene00001035; WP:CE16336 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain. WormBase CDS description: DnaJ, prokaryotic heat shock protein, Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

T04A11.6 Aff_T04A11.6 P W All gene names: blm-1; him-6; T04A11.6; 4N259; CE31724; NM_069989; WBGene00001865; WP:CE31724 WormBase description: him-6 encodes a RecQ-like ATP-dependent DNA helicase orthologous to human BLM (OMIM:604610, mutated in Bloom syndrome); HIM-6 is required for normal levels of recombination during meiosis and as such, loss of HIM-6 function results in an increased frequency of genotypically XO males and inviable aneuoploid embryos as a result of higher levels of chromosome nondisjunction; HIM-6 interacts both genetically and in vitro with TOP-3, DNA topoisomerase IIIalpha, with which it functions to regulate genomic stability during germ-line mitosis; HIM-6 is expressed primarily in the germ line. WormBase CDS description: helicase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig5                                    
                                              conserved w/ yeast, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen                                                    

T04A8.11 Aff_T04A8.11 P W All gene names: T04A8.11; 3F793; CE01066; WBGene00011412; WP:CE01066 WormBase description: 50S ribosomal protein L16
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

T04A8.12 Aff_T04A8.12 P W All gene names: tag-189; T04A8.12; 3F795; CE01067; WBGene00007045; WBGene00011413; WP:CE01067 WormBase description: Yeast 107.9KD PGK1-MAK32 intergenic hypothetical protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T04A8.16 Aff_T04A8.16 P W All gene names: clp-2; T04A8.16; 3F790; CE01070; NM_065563; WBGene00000543; WP:CE01070 WormBase description: clp-2 encodes a large calpain subunit that contains two predicted MIT (microtubule interacting and trafficking) domains and is homologous to the mammalian Calpain 7 proteins and the atypical, nuclear-localized Aspergillus calpain, PalB; by homology, CLP-2 is predicted to function as a calcium-dependent, cysteine protease that is involved in intracellular proteolysis and peptidolysis; however, as loss of clp-2 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of CLP-2 in C. elegans development and/or behavior is not yet known. WormBase CDS description: Calpain thiol protease
T04A8.6 Aff_T04A8.6 P W All gene names: T04A8.6; 3F782; CE01075; WBGene00011408; WP:CE01075 WormBase description: ribonuleoprotein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              oogenesis enriched genes, Reinke et al 2004, wt vs                                 
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, GO categories,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

T04A8.9 Aff_T04A8.9 P W All gene names: dnj-18; T04A8.9; T04A8.9.1; T04A8.9.2; 3F787; CE01078; NM_065561; WBGene00001036; WP:CE01078 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain. WormBase CDS description: DNAJ
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T04C10.2 Aff_T04C10.2 P W All gene names: epn-1; T04C10.2; CE26820; CE26821; NM_078057; NM_078058; WBGene00001329; WP:CE26820; WP:CE26821; XP436 WormBase description: Yeast hypothetical protein L8167.6 like
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T04D3.5 Aff_T04D3.5 P W All gene names: T04D3.5; 1N922; CE13161; WBGene00011434; WP:CE13161
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T05A6.1 Aff_T05A6.1 P W All gene names: cki-1; T05A6.1; 2I101; CE03628; NM_063240; WBGene00000516; WP:CE03628 WormBase description: cki-1 encodes a homolog of the mammalian cyclin-dependent kinase inhibitor p27/KIP1 that is required for the arrest of cell division in larval blast lineages, dauer larvae and starved L1 larvae; excess CKI-1 expression prematurely stops cell division while cki-1(RNAi) induces extra cell divisions, indicating that CKI-1 quantitatively regulates the amount of mitosis in postembryonic worms.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T05C12.6 Aff_T05C12.6 P W All gene names: mig-5; T05C12.6; 2I474; CE02318; CE25100; CE28076; WBGene00003241; WP:CE02318; WP:CE25100; WP:CE28076 WormBase description: mig-5 encodes one of three C. elegans Dishevelled homologs; as part of both canonical and non-canonical Wnt signaling pathways, mig-5 activity is required maternally and embryonically for cell migration, cell fate specification, and proper spindle orientation in the early embryo; cells affected by mig-5 mutations include the distal tip cells (DTCs), the QL neuroblast descendants (QL.d), the vulval precursor cells, and the P12 ectoblast; in the early embryo, MIG-5 functions downstream of MOM-2/Wnt and MOM-1/Porc, and redundantly with two other Dishevelled homologs, DSH-1 and DSH-2, in a non-canonical Wnt pathway that specifies the endoderm cell fate and regulates mitotic spindle orientation in the EMS and ABar blastomeres; in posteriorly directed QL.d migrations, MIG-5 functions downstream of EGL-20/Wnt and upstream of PRY-1/Axin in a canonical Wnt pathway to positively regulate Wnt signaling and effect MAB-5 expression in QL.d; a mig-5::GFP fusion is reportedly expressed in many cells in the embryo, migrating DTCs, P cells, and the nerve ring. WormBase CDS description: presynaptic density protein (PSD-95) repeat-like domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

T05E11.3 Aff_T05E11.3 P W All gene names: T05E11.3; T05E11.3.1; T05E11.3.2; 4L887; CE06362; WBGene00011480; WP:CE06362 WormBase description: endoplasmin precursor (GRP94)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002 Aging time course                                 
                                              Fig2C heatshock, McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Romagnolo et al 2002  Fig2a heat shock,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T05E11.5 Aff_T05E11.5 P W All gene names: imp-2; T05E11.5; 4L882; CE06364; NM_069678; WBGene00011481; WP:CE06364 WormBase description: Yeast YKK0 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

T05F1.1 Aff_T05F1.1 P W All gene names: T05F1.1; T05F1.1.1; T05F1.1.2; 1K197; CE13267; WBGene00011488; WP:CE13267
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

T05F1.4 Aff_T05F1.4 P W All gene names: T05F1.4; CE13261; NM_060157; WBGene00011490; WP:CE13261
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T05G5.6 Aff_T05G5.6 P W All gene names: ech-6; T05G5.6; T05G5.6.1; T05G5.6.2; 3K842; CE00318; NM_066755; WBGene00001155; WP:CE00318 WormBase description: Enoyl-CoA hydratase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Reinke et al 2004, herm soma enriched genes,                            
                                              Reinke et al 2004, GO categories, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 Climbing, Wang                             
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

T05H4.13 Aff_T05H4.13 P W All gene names: alh-4; T05H4.13; T05H4.13c.1; T05H4.13c.2; 5G908; CE27441; CE30827; CE33307; NM_072233; NM_171471; NM_171472; WBGene00000110; WP:CE27441; WP:CE30827; WP:CE33307 WormBase description: aldehyde dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T06D8.9 Aff_T06D8.9 P W All gene names: T06D8.9; T06D8.9.1; T06D8.9.2; 2L531; CE38219; WBGene00011529; WP:CE38219
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

T06E4.3 Aff_T06E4.3 P W All gene names: Ce-atl1; atl-1; T06E4.3; 5K116; CE25103; CE28250; NM_073086; WBGene00000226; WP:CE25103; WP:CE28250 WormBase description: The atl-1 gene encodes a large, 2514-residue protein of the ATM family, homologous to human AT (OMIM:208900, mutated in ataxia telangiectasia); the C-terminal sequence of ATL-1 contains a PI-3 kinase-like domain; ATL-1 is required for survival through early embryogenesis and normal chromosomal segregation; atl-1 is expressed in both the mitotic and meiotic cells of adult gonads.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes                                      

T06E8.1 Aff_T06E8.1 P W All gene names: acl-2; T06E8.1; 5K510; CE06378; NM_073177; WBGene00011543; WP:CE06378 WormBase description: T06E8.1 is orthologous to the human gene 1-ACYLGLYCEROL-3-PHOSPHATE O-ACYLTRANSFERASE 2 (LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE, BETA) (AGPAT2; OMIM:603100), which when mutated leads to disease; T06E8.1 protein is predicted to be mitochondrial. WormBase CDS description: 1-acyl-SN-glycerol-3-phophate acyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T06H11.4 Aff_T06H11.4 P W All gene names: moc-1; T06H11.4; CE31596; NM_077299; WBGene00003384; WP:CE31596; XK756 WormBase description: moc-1 encodes an ortholog of human GEPHYRIN (GPHN; OMIM:603930), which when mutated leads to molybdenum cofactor (MoCo) deficiency; MOC-1 is also paralogous to LIN-46. WormBase CDS description: gephyrin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T07C4.1 Aff_T07C4.1 P W All gene names: T07C4.1; T07C4.1.1; T07C4.1.2; 3L446; CE00638; WBGene00011559; WP:CE00638 WormBase description: T07C4.1 is orthologous to the human gene URIDINE MONOPHOSPHATE SYNTHETASE (OROTATE PHOSPHORIBOSYL TRANSFERASE AND OROTIDINE-5'-DECARBOXYLASE) (UMPS; OMIM:258900), which when mutated leads to disease. WormBase CDS description: UMP synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

T07E3.5 Aff_T07E3.5 P W All gene names: brc-2; T07E3.5; 3H990; CE32718; NM_066101; WBGene00020316; WP:CE32718 WormBase description: The T07E3.5 gene encodes a single BRC domain (in residues 12-109) that might promote double-stranded DNA break repair; eight tandem BRC domains are encoded by the central coding region of the human BRCA2 gene, which when mutated leads to early-onset breast cancer 2 or hereditary male breast cancer (OMIM:600185).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

T08D10.2 Aff_T08D10.2 P W All gene names: T08D10.2; CE33174; WBGene00011615; WP:CE33174; XM569 WormBase description: T08D10.2 encodes an ortholog of the human histone demethylase LSD1 (KIAA0601), and a paralog of C. elegans SPR-5; similar histone demethylase homologs are found in human, mouse, Drosophila, fission yeast, and Arabidopsis; T08D10.2 is predicted to demethylate histone H3 lysine 4 residues and act as a transcriptional corepressor. WormBase CDS description: corticosteroid-binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

T09A5.5 Aff_T09A5.5 P W All gene names: T09A5.5; T09A5.5.1; T09A5.5.2; 2I142; CE01086; WBGene00011634; WP:CE01086
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T09A5.6 Aff_T09A5.6 P W All gene names: mdt-10; T09A5.6; 2I144; CE01087; NM_063249; WBGene00007014; WP:CE01087
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes                                        

T09A5.7 Aff_T09A5.7 P W All gene names: T09A5.7; T09A5.7.1; T09A5.7.2; 2I146; CE01088; WBGene00011635; WP:CE01088
T09A5.9 Aff_T09A5.9 P W All gene names: T09A5.9; T09A5.9.1; T09A5.9.2; T09A5.9.3; 2I149; CE01090; WBGene00011637; WP:CE01090 WormBase description: SDS22 protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated, Wang et al 2003  S8 SAGE genes in the dauer                             
                                              exit, Wang et al 2003  S7 SAGE genes in the dataset                                

T09B4.10 Aff_T09B4.10 P W All gene names: chn-1; tag-69; T09B4.10; T09B4.10.1; T09B4.10.2; 1G758; CE29991; NM_059380; WBGene00000500; WP:CE29991
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E                                                   

T09B4.2 Aff_T09B4.2 P W All gene names: T09B4.2; 1G761; CE13459; WBGene00020376; WP:CE13459
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T09E8.3 Aff_T09E8.3 P W All gene names: T09E8.3; 5N661; CE23961; WBGene00011648; WP:CE23961 WormBase description: cornichon protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T10B5.6 Aff_T10B5.6 P W All gene names: knl-3; T10B5.6; 5C349; CE18236; NM_071119; WBGene00020392; WP:CE18236
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, Fig2b shared                                   
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

T10C6.6 Aff_T10C6.6 P W All gene names: T10C6.6; T10C6.6a.1; T10C6.6a.2; T10C6.6a.3; T10C6.6b.1; T10C6.6b.2; T10C6.6b.3; T10C6.6b.4; T10C6.6b.5; 5Q507; CE16381; CE23965; WBGene00011688; WP:CE16381; WP:CE23965 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T10E9.1 Aff_T10E9.1 P W All gene names: T10E9.1; 1H121; CE13543; WBGene00020411; WP:CE13543 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T10H9.3 Aff_T10H9.3 P W All gene names: T10H9.3; 5H134; CE18251; WBGene00020425; WP:CE18251
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T12A2.15 Aff_T12A2.14 P W All gene names: T12A2.14; T12A2.15; 3H314; CE18255; CE30392; WBGene00020443; WP:CE18255; WP:CE30392
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

T12A2.7 Aff_T12A2.7 P W All gene names: T12A2.7; 3H334; CE30396; WBGene00020441; WP:CE30396
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

T12B3.3 Aff_T12B3.B P W All gene names: T12B3.3; T12B3.B; 4I141; CE21178; WBGene00020446; WP:CE21178 WormBase description: phosphodiesterase
T12B3.4 Aff_T12B3.A P W All gene names: T12B3.4; 4I150; CE21179; WBGene00020447; WP:CE21179
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T12D8.2 Aff_T12D8.2 P W All gene names: drr-2; T12D8.2; T12D8.2.1; T12D8.2.2; 3O734; CE16399; WBGene00011730; WP:CE16399 WormBase description: RNA recognition motif. (aka RRM, RBD, or RNP domain)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S5                                 
                                              genes common to feeding ANOVA, Wang et al 2003  S3                                 
                                              genes pass one-way ANOVA                                                           

T12D8.6 Aff_T12D8.6 P W All gene names: T12D8.6; 3O713; CE16403; WBGene00011734; WP:CE16403 WormBase description: EF hand
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

T12D8.8 Aff_T12D8.8 P W All gene names: T12D8.8; T12D8.8.1; T12D8.8.2; T12D8.8.3; 3O704; CE16405; WBGene00011735; WP:CE16405 WormBase description: TPR Domain (2 domains)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

T12F5.1 Aff_T12F5.1 P W All gene names: T12F5.1; 1E311; CE13595; WBGene00020466; WP:CE13595
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, wt herm vs wt male                            
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

T12G3.4 Aff_T12G3.4 P W All gene names: T12G3.4; 4M813; CE06440; WBGene00011739; WP:CE06440 WormBase description: strictosidine synthase like
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T12G3.5 Aff_T12G3.5 P W All gene names: T12G3.5; T12G3.5.1; T12G3.5.2; 4M795; CE06441; WBGene00011740; WP:CE06441
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T13H5.5 Aff_T13H5.5 P W All gene names: T13H5.5; 2I817; CE03656; WBGene00011759; WP:CE03656
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen                                        

T14B4.2 Aff_T14B4.2 P W All gene names: T14B4.2; 2H27; CE04952; WBGene00020499; WP:CE04952
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

T17E9.2 Aff_T17E9.2 P W All gene names: T17E9.2; T17E9.2c.1; T17E9.2c.2; 3H204; CE01406; CE28669; CE31611; WBGene00020549; WP:CE01406; WP:CE28669; WP:CE31611
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T19A5.1 Aff_T19A5.1 P W All gene names: T19A5.1; T19A5.1.1; T19A5.1.2; 5J441; CE07509; WBGene00020553; WP:CE07509
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

T19B4.4 Aff_T19B4.4 P W All gene names: dnj-21; T19B4.4; T19B4.4.1; T19B4.4.2; 1G245; CE13742; NM_059261; WBGene00001039; WP:CE13742 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T20B12.1 Aff_T20B12.1 P W All gene names: T20B12.1; 3I479; CE01407; WBGene00020600; WP:CE01407
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Romagnolo et al 2002                                 
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

T20D3.3 Aff_T20D3.3 P W All gene names: T20D3.3; T20D3.3a.1; T20D3.3a.2; 4K98; CE28683; CE38418; WBGene00011857; WP:CE28683; WP:CE38418
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

T20F10.2 Aff_T20F10.2 P W All gene names: T20F10.2; 1K875; CE21191; WBGene00011864; WP:CE21191
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T20F7.1 Aff_T20F7.1 P W All gene names: T20F7.1; CE33698; WBGene00020630; WP:CE33698; XR491
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen                                           

T20G5.10 Aff_T20G5.10 P W All gene names: T20G5.10; 3L300; CE00629; WBGene00011872; WP:CE00629
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

T20G5.9 Aff_T20G5.9 P W All gene names: T20G5.9; 3L299; CE34095; WBGene00011871; WP:CE34095
T20H4.3 Aff_T20H4.3 P W All gene names: prs-1; T20H4.3; T20H4.3a.1; T20H4.3a.2; 3I329; CE00748; CE37410; WBGene00004189; WP:CE00748; WP:CE37410 WormBase description: prs-1 encodes a predicted cytoplasmic prolyl-tRNA synthetase (ProRS), a class II aminoacyl-tRNA synthetase that catalyzes the attachment of proline to its cognate tRNA and is thus required for protein biosynthesis; PRS-1 is required for embryonic, germline, and postembryonic development.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, intrinsic, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Wang et al 2003  S5 genes                            
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

T21B10.1 Aff_T21B10.1 P W All gene names: T21B10.1; 2J221; CE03683; WBGene00011883; WP:CE03683
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

T21B10.2 Aff_T21B10.2 P W All gene names: T21B10.2; T21B10.2a.1; T21B10.2a.2; 2J223; CE03684; CE32730; CE36954; WBGene00011884; WP:CE03684; WP:CE32730; WP:CE36954 WormBase description: T21B10.2 is orthologous to human ENOLASE 1 (also CRYSTALLIN, TAU; ENO1; OMIM:172430), which when mutated leads to spherocytic red cell enolase deficiency.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T21C9.5 Aff_T21C9.5 P W All gene names: lpd-9; T21C9.5; T21C9.5.1; T21C9.5.2; 5L61; CE06474; NM_073313; WBGene00003065; WP:CE06474
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

T22C1.3 Aff_T22C1.3 P W All gene names: T22C1.3; 1I515; CE39412; WBGene00011914; WP:CE39412 WormBase description: cell division control protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T23B12.2 Aff_T23B12.2 P W All gene names: T23B12.2; 5I949; CE14028; WBGene00020717; WP:CE14028 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: ribosomal protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

T23B12.3 Aff_T23B12.3 P W All gene names: T23B12.3; 5I947; CE14030; WBGene00020718; WP:CE14030 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: ribosomal protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

T23D8.4 Aff_T23D8.4 P W All gene names: eif-3.C; T23D8.4; T23D8.4.1; T23D8.4.2; 1K554; CE18958; NM_060237; WBGene00001226; WP:CE18958
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

T23F11.4 Aff_T23F11.4 P W All gene names: T23F11.4; 3F754; CE01097; WBGene00011956; WP:CE01097 WormBase description: Zinc finger protein (C2H2 type)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T24B8.2 Aff_T24B8.2 P W All gene names: T24B8.2; 2J345; CE03710; WBGene00011976; WP:CE03710 WormBase description: Yeast SNF7 like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, intrinsic, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, Romagnolo et al 2002                             
                                              Fig3b secretion, ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T24D1.4 Aff_T24D1.4 P W All gene names: tag-179; T24D1.4; 1K538; CE14168; WBGene00007043; WBGene00011987; WP:CE14168 WormBase description: Yeast DIE2 protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

T24H10.6 Aff_T24H10.6 P W All gene names: dyrb-1; T24H10.6; 2J396; CE03731; NM_063542; WBGene00012004; WP:CE03731 WormBase description: bithoraxoid-like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T25B9.8 Aff_T25B9.8 P W All gene names: T25B9.8; 4L532; CE32940; WBGene00012014; WP:CE32940 WormBase description: lin-15a like protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

T25D3.2 Aff_T25D3.2 P W All gene names: T25D3.2; 2A446; CE19599; WBGene00020796; WP:CE19599
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Romagnolo et al 2002  Fig3b others,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T25G3.3 Aff_T25G3.3 P W All gene names: T25G3.3; T25G3.3.1; T25G3.3.2; CE30306; NM_059713; WBGene00012030; WP:CE30306 WormBase description: Yeast nonsense-mediated mRNA decay protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

T26A5.6 Aff_T26A5.6 P W All gene names: T26A5.6; T26A5.6.1; T26A5.6.2; 3H538; CE29822; WBGene00020822; WP:CE29822
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, list of genes in                             
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

T26G10.1 Aff_T26G10.1 P W All gene names: T26G10.1; 3K494; CE00337; WBGene00012059; WP:CE00337 WormBase description: RNA helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

T27E9.2 Aff_T27E9.2 P W All gene names: T27E9.2; T27E9.2.1; T27E9.2.2; 3O550; CE14265; WBGene00012094; WP:CE14265 WormBase description: ubiquinol-cytochrome c reductase complexn 11 KD protein
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , Golden et al 2004, daf-2                                      
                                              differentially expressed , Golden et al 2004, N2 vs                                
                                              daf-2 age different gene                                                           

T27E9.3 Aff_T27E9.3 P W All gene names: cdk-5; T27E9.3; 3O554; CE21213; NM_067382; WBGene00000407; WP:CE21213 WormBase description: cdk-5 encodes a putative homolog of cyclin dependent kinase 5 that affects pronuclear migration and rotation in one-cell embryos and may affect neuronal development; expressed in neurons. WormBase CDS description: serine/threonine kinase (CDC2/CDKX subfamily)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, list of genes in cluster E                                                

T27E9.4 Aff_T27E9.4 P W All gene names: kel-3; T27E9.4; T27E9.4a.1; T27E9.4a.2; T27E9.4a.3; 3O559; CE29824; CE29825; NM_067383; NM_067384; WBGene00002185; WP:CE29824; WP:CE29825 WormBase description: ring canal protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

T27F7.1 Aff_F59A6.7 P W All gene names: T27F7.1; T27F7.1.1; T27F7.1.2; CE27211; NM_062518; WBGene00020866; WP:CE27211
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster E,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

VF36H2L.1 Aff_VF36H2L.1 P W All gene names: aph-1; pen-1; VF36H2L.1; 1J808; CE16526; NM_060068; WBGene00000147; WP:CE16526 WormBase description: aph-1 encodes an unfamiliar protein predicted to have seven transmembrane domains; APH-1 is a component of the GLP-1/LIN-12 (Notch) pathway, is required maternally for embryonic viability, and also affects morphogenesis, egg laying, germ line proliferation, and translocation of APH-2 to the cell surface; with PEN-2, APH-1 is required for Notch pathway signaling, gamma-secretase cleavage of beta-amyloid precursor protein, and presenilin protein accumulation.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

W01D2.5 Aff_W01D2.5 P W All gene names: W01D2.5; 2P99; CE20128; WBGene00012182; WP:CE20128
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, mixed oogenesis soma, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated                                                   

W01G7.3 Aff_W01G7.3 P W All gene names: W01G7.3; 2O351; CE18986; WBGene00012187; WP:CE18986 WormBase description: RNA polymerases L / 13 to 16 Kd subunit
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig5                                    
                                              conserved w/ yeast, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

W02A11.2 Aff_W02A11.2 P W All gene names: W02A11.2; 1N326; CE24025; WBGene00012193; WP:CE24025
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

W02A11.3 Aff_W02A11.3 P W All gene names: W02A11.3; W02A11.3.1; W02A11.3.2; 1N331; CE18990; WBGene00012194; WP:CE18990 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

W02B12.10 Aff_W02B12.10 P W All gene names: W02B12.10; 2L762; CE03770; WBGene00012205; WP:CE03770 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

W02D3.2 Aff_W02D3.2 P W All gene names: W02D3.2; 1H315; CE14420; WBGene00020932; WP:CE14420 WormBase description: dihydroorotate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, herm                              
                                              soma enriched genes, Reinke et al 2004, GO categories,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

W02D9.2 Aff_W02D9.2 P W All gene names: W02D9.2; 1N125; CE14456; WBGene00012208; WP:CE14456 WormBase description: Yeast YIP1 protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

W02F12.4 Aff_W02F12.4 P W All gene names: W02F12.4; 5H186; CE39790; CE39791; CE39792; WBGene00020949; WP:CE39790; WP:CE39791; WP:CE39792
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

W02F12.5 Aff_W02F12.5 P W All gene names: W02F12.5; W02F12.5.1; W02F12.5.2; W02F12.5.3; 5H188; CE31083; WBGene00020950; WP:CE31083 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: dihydrolipoamide succinyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

W03F9.2 Aff_W03F9.2 P W All gene names: W03F9.2; 5A606; CE14526; CE24030; WBGene00021000; WP:CE14526; WP:CE24030
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

W05H7.3 Aff_W05H7.3 P W All gene names: sedl-1; W05H7.3; CE14652; NM_075871; WBGene00021046; WP:CE14652; XC58
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

W05H9.2 Aff_W05H9.2 P W All gene names: W05H9.2; CE33720; WBGene00021049; WP:CE33720; XG889
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

W07G4.4 Aff_W07G4.4 P W All gene names: W07G4.4; 5N525; CE03794; WBGene00012338; WP:CE03794 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: cytosolic aminopeptidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

W08E3.3 Aff_W08E3.3 P W All gene names: tag-210; W08E3.3; 1N935; CE14708; WBGene00012344; WBGene00044075; WP:CE14708 WormBase description: GTP-binding protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

W09B6.4 Aff_W09B6.4 P W All gene names: W09B6.4; 2B424; CE39038; CE39801; WBGene00021104; WP:CE39038; WP:CE39801
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

W09D10.3 Aff_W09D10.3 P W All gene names: W09D10.3; 3L797; CE16564;