Baugh et al 2003, subclass SE_PC32, 8 genes

Gene list file name:Baugh2003_classSEpi_PC32.txt
Type of gene identifier:Affymetrix custom chip
Description:Baugh et al 2005, Supplymental Dataset, subclass SE_PC32  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

C10C6.3 Aff_C10C6.3 P W All gene names: C10C6.3; 4M226; CE35392; WBGene00007512; WP:CE35392
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes                                                          

C33B4.3 Aff_C33B4.3 P W All gene names: tag-67; C33B4.3; 2L676; CE01508; CE36107; WBGene00006444; WP:CE01508; WP:CE36107 WormBase description: ankyrin and proline rich domains
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C52D10.7 Aff_C52D10.7 P W All gene names: skr-9; C52D10.7; 4S107; CE17591; NM_070642; WBGene00004815; WP:CE17591 WormBase description: skr-9 encodes a homolog of Skp1 in S. cerevisiae, a component of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; SKR-9 is required for posterior body morphogenesis, embryonic and larval development, and postembryonic cell proliferation. WormBase CDS description: cyclin A-associated protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Murphy et al 2003  Fig2 Class2 shorten                                     
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F38C2.5 Aff_F38C2.5 P W All gene names: F38C2.5; 4R43; CE16004; WBGene00009537; WP:CE16004 WormBase description: Zinc finger C-x8-C-x5-C-x3-H type (and similar). (2 domains)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K01D12.14 Aff_K01D12.14 P W All gene names: cdr-5; K01D12.14; 5M888; CE38390; NM_073710; WBGene00010473; WP:CE38390
T10C6.10 Aff_T10C6.10 P W All gene names: T10C6.10; 5Q517; CE16385; WBGene00011691; WP:CE16385 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated                                                      

Y50E8A.11 Aff_Y50E8A.Q P W All gene names: Y50E8A.11; 5P263; CE22318; WBGene00013054; WP:CE22318
Y75B12A.2 Aff_Y75B12A.2 P W All gene names: Y75B12A.2; 5P591; CE19269; WBGene00013566; WP:CE19269
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol