Baugh et al 2003, subclass MDpd_66min, 153 genes

Gene list file name:Baugh2003_classMDpd_66min.txt
Type of gene identifier:Affymetrix custom chip
Description:Baugh et al 2005, Supplymental Dataset, subclass MDpd_159min  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AFF_R07E5.12 Aff_R07E5.12 P W
AFF_T08D2.G Aff_T08D2.G P W
AFF_Y13C8_223.D Aff_Y13C8_223.D P W
B0001.4 Aff_B0001.4 P W All gene names: B0001.4; 4M900; CE37307; WBGene00007089; WP:CE37307 WormBase description: uridine kinase like
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0250.5 Aff_B0250.5 P W All gene names: B0250.5; 5U965; CE18481; WBGene00007122; WP:CE18481 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: 3-HYDROXYISOBUTYRATE DEHYDROGENASE PRECURSOR (EC 1.1.1.31) (HIBADH) (FRAGMENT)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

B0491.7 Aff_B0491.7 P W All gene names: B0491.7; 2L641; CE02109; WBGene00007194; WP:CE02109 WormBase description: B0491.7 encodes a putative diphthine synthase orthologous to S. cerevisiae DPH5; DPH5 is an S-adenosylmethionine:EF-2 methyltransferase required for the enzymatic conversion of 3-amino-3-carboxypropyl-histidine to diphthine; DPH5 adds at least the last two of the three methyl groups present in diphthine, and is homologous to bacterial AdoMet:uroporphyrinogen III methyltransferases. WormBase CDS description: diphthine synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0546.1 Aff_B0546.1 P W All gene names: B0546.1; B0546.1.1; B0546.1.2; B0546.1.3; 4E151; CE16792; WBGene00015248; WP:CE16792 WormBase description: ATPase inhibitor
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C06A6.4 Aff_C06A6.4 P W All gene names: C06A6.4; 4I592; CE35224; CE37607; WBGene00015509; WP:CE35224; WP:CE37607 WormBase description: aminoacylase-1
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C08F8.3 Aff_C08F8.3 P W All gene names: C08F8.3; 4L921; CE30596; WBGene00007445; WP:CE30596
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C14B1.6 Aff_C14B1.6 P W All gene names: C14B1.6; 3E807; CE31415; WBGene00007577; WP:CE31415
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C15F1.6 Aff_C15F1.C P W All gene names: art-1; C15F1.6; 2H262; CE20509; NM_063029; WBGene00000198; WP:CE20509 WormBase description: a protein similar to synaptic glycoprotein SC2 from mammals.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C15F1.7 Aff_C15F1.B P W All gene names: sod-1; C15F1.7; C15F1.7b.1; C15F1.7b.2; C15F1.B; 2H264; CE20508; CE23550; NM_063030; WBGene00004930; WP:CE20508; WP:CE23550 WormBase description: The sod-1 gene encodes an ortholog of human SOD1 (OMIM:147450), which when mutated leads to amyotrophic lateral sclerosis (OMIM:105400).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C16A11.3 Aff_C16A11.3 P W All gene names: C16A11.3; 2E523; CE19353; WBGene00015816; WP:CE19353 WormBase description: protein kinase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, intrinsic,                                  
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C16A3.5 Aff_C16A3.5 P W All gene names: C16A3.5; C16A3.5.1; C16A3.5.2; 3H471; CE04005; WBGene00015810; WP:CE04005 WormBase description: NADH-ubiquinone oxidoreductase B22
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, McCarroll et al 2004  SFig1-4 conserved w/                                  
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

C16C10.11 Aff_C16C10.11 P W All gene names: C16C10.11; C16C10.11.1; C16C10.11.2; 3F241; CE01491; WBGene00007630; WP:CE01491
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C16C8.11 Aff_C16C8.11 P W All gene names: C16C8.11; 2D747; CE08222; WBGene00015849; WP:CE08222
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C18E3.5 Aff_C18E3.5 P W All gene names: C18E3.5; 1E771; CE27713; WBGene00015974; WP:CE27713 WormBase description: beta transducin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched                                                              

C18F10.7 Aff_C18F10.7 P W All gene names: C18F10.7; C18F10.7a.1; C18F10.7a.2; 3H366; CE00784; CE30608; WBGene00015978; WP:CE00784; WP:CE30608
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C24G6.3 Aff_C24G6.3 P W All gene names: C24G6.3; 5F999; CE29673; WBGene00016060; WP:CE29673
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

C25A1.12 Aff_C25A1.12 P W All gene names: C25A1.12; 1K768; CE08378; WBGene00007711; WP:CE08378
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C25A1.9 Aff_C25A1.9 P W All gene names: C25A1.9; 1K763; CE18532; WBGene00007710; WP:CE18532
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C27B7.5 Aff_C27B7.5 P W All gene names: C27B7.5; 4J667; CE03034; WBGene00007762; WP:CE03034 WormBase description: Zinc finger, CCHC class
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Jones et al 2001  Non dauer                             
                                              genes P<0.05, Reinke et al 2004, list of genes in                                  
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              Romagnolo et al 2002  Fig3b TF, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

C27C7.1 Aff_C27C7.1 P W All gene names: C27C7.1; 1M31; CE19705; WBGene00007766; WP:CE19705
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C28A5.1 Aff_C28A5.1 P W All gene names: C28A5.1; 3F520; CE00675; WBGene00007788; WP:CE00675
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

C32D5.10 Aff_C32D5.10 P W All gene names: C32D5.10; 2G640; CE29688; WBGene00016317; WP:CE29688
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

C32E8.9 Aff_C32E8.9 P W All gene names: C32E8.9; 1E364; CE29693; WBGene00016325; WP:CE29693
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b                                       
                                              Metabolism, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C34B2.2 Aff_C34B2.2 P W All gene names: kbp-5; C34B2.2; 1L263; CE16890; NM_060399; WBGene00016387; WP:CE16890
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C35D6.4 Aff_C35D6.4 P W All gene names: C35D6.4; 4R103; CE15683; WBGene00007961; WP:CE15683 WormBase description: Zinc finger C-x8-C-x5-C-x3-H type (and similar). (2 domains)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C41C4.4 Aff_C41C4.4 P W All gene names: ire-1; C41C4.4; 2I404; CE35836; NM_063300; WBGene00002147; WP:CE35836 WormBase description: ire-1 encodes a transmembrane serine/threonine protein kinase and site-specific endoribonuclease orthologous to Saccharomyces cerevisiae inositol-requiring 1 protein kinase (Ire1) and human endoplasmic reticulum-to-nucleus signaling 1 (ERN1, OMIM:604033); IRE-1 is required for the unfolded protein response (UPR) that counteracts cellular stress induced by accumulation of unfolded proteins in the endoplasmic reticulum (ER); in response to ER stress, IRE-1 cleaves xbp-1 mRNA to produce transcriptionally active XBP-1 that positively regulates UPR gene expression in order to maintain ER homeostasis. WormBase CDS description: serine/threonine kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster E,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C47B2.6 Aff_C47B2.6 P W All gene names: C47B2.6; 1N569; CE17566; CE38295; WBGene00008132; WP:CE17566; WP:CE38295 WormBase description: The C47B2.6 gene encodes an ortholog of the human gene UDP-GALACTOSE-4-EPIMERASE (GALE; OMIM:606953), which when mutated leads to galactose epimerase deficiency (OMIM:230350). WormBase CDS description: NAD dependant epimerase/dehydratase family
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C47C12.4 Aff_C47C12.4 P W All gene names: C47C12.4; CE08797; WBGene00016737; WP:CE08797; XI366 WormBase description: ATP/GTP-binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C48B4.10 Aff_C48B4.10 P W All gene names: C48B4.10; 3K654; CE33604; WBGene00008173; WP:CE33604
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

F02A9.4 Aff_F02A9.5 P W All gene names: F02A9.4; F02A9.5; 3K174; CE00136; CE33612; WBGene00008514; WP:CE00136; WP:CE33612 WormBase description: F02A9.4 is orthologous to the human gene SIMILAR TO METHYLCROTONOYL-COENZYME A CARBOXYLASE 2 (BETA) (MCCC2; OMIM:210210), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S4 Early genes, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F09F7.4 Aff_F09F7.4 P W All gene names: F09F7.4; F09F7.4a.1; F09F7.4a.2; F09F7.4b.1; F09F7.4b.2; F09F7.4b.3; 3G645; CE00689; CE30654; WBGene00017301; WP:CE00689; WP:CE30654 WormBase description: Enoyl-CoA hydratase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F13A7.10 Aff_F13A7.10 P W All gene names: gst-44; F13A7.10; 5Q869; CE15815; NM_074741; WBGene00001792; WP:CE15815 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F13G3.5 Aff_F13G3.5 P W All gene names: F13G3.5; F13G3.5.1; F13G3.5.2; 1H878; CE29761; WBGene00008765; WP:CE29761 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: myo-inositol-1-monophosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F14H3.5 Aff_F14H3.5 P W All gene names: F14H3.5; 5Q536; CE15830; WBGene00008824; WP:CE15830
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, daf-2                                          
                                              differentially expressed , Reinke et al 2004,                                      
                                              intrinsic, Reinke et al 2004, wt vs glp-4 enriched                                 
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, list of genes in cluster E,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F14H3.6 Aff_F14H3.6 P W All gene names: F14H3.6; 5Q538; CE23652; WBGene00008825; WP:CE23652
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              males vs glp4 male enriched , Reinke et al 2004, wt                                
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E                                                              

F26D10.3 Aff_F26D10.3 P W All gene names: hsp-1; F26D10.3; F26D10.3.1; F26D10.3.2; F26D10.3.3; T28F3.2; 4S223; CE09682; NM_070667; WBGene00002005; WP:CE09682 WormBase description: hsp-1 encodes hsp70A, a member of the heat shock family of proteins; hsp70A is closely related to the Drosophila heat inducible hsp70s and the S. cerevisiae SSA hsp70 subfamily; the hsp-1 gene is normally expressed throughout development and upon heat-shock the hsp-1 mRNA is enhanced 2-6 fold; down-regulation of hsp-1 via RNA interference results in a small reduction in the life-span of an age-1 mutant indicating that hsp-1 may play some role in regulating longevity. WormBase CDS description: HSP-1 heat shock 70kd protein A
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 heat shock,                               
                                              Lund et al 2002 Aging time course Fig2C heatshock,                                 
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Romagnolo et al 2002  Fig2a heat                             
                                              shock, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F29B9.4 Aff_F29B9.4 P W All gene names: psr-1; tag-159; F29B9.4; F29B9.4a.1; F29B9.4a.2; F29B9.4b.1; F29B9.4b.2; 4F419; CE27146; CE39926; NM_068205; WBGene00004205; WP:CE27146; WP:CE39926 WormBase description: psr-1 encodes an ortholog of the mammalian apoptotic phosphatidylserine receptor, whose product recognizes phosphatidylserine on apoptotic cells and enables cells expressing the receptor to recognize and engulf apoptotic cells in a phosphatidylserine-specific manner; psr-1 was not mutated in classical screens for Ced mutants, but, given its high similarity, may nevertheless mediate phosphatidylserine recognition on apoptotic cells during their removal by phagocytes.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

F30A10.5 Aff_F30A10.5 P W All gene names: stl-1; F30A10.5; F30A10.5.1; F30A10.5.2; 1K62; CE32397; NM_060116; WBGene00006061; WP:CE32397 WormBase description: erythrocyte band 7 integral membrane protein like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Kwon et al 2004 T1 late-induction                                          
                                              Ethanol-response, Lund et al 2002   Fig3C                                          
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

F35D2.3 Aff_F35D2.3 P W All gene names: F35D2.3; 2H861; CE31804; WBGene00018041; WP:CE31804
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, PAL-1 target genes,                             
                                              Jones et al 2001  Non dauer genes P<0.05                                           

F35G12.6 Aff_F35G12.6 P W All gene names: mab-21; F35G12.6; 3F691; CE32651; NM_065539; WBGene00003112; WP:CE32651 WormBase description: mab-21 encodes a novel protein that is a member of a highly conserved family of proteins with Drosophila and vertebrate orthologs; MAB-21 is cell-autonomously required for specifying the identity of sensory ray 6 in the male tail, and also for backward locomotion, normal body morphology, fecundity, and embryonic morphogenesis; MAB-21 expression begins in embryonic hypodermal cells and continues in larval and adult animals in hypodermis, anterior and ventral cord neurons, some body wall muscles, and ray cells.
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster B,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Early genes, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

F36D1.1 Aff_F36D1.1 P W All gene names: F36D1.1; 1L870; CE19832; WBGene00009461; WP:CE19832
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F36F12.8 Aff_F36F12.8 P W All gene names: F36F12.8; 5C569; CE17788; WBGene00018099; WP:CE17788 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, fem1 enriched                                 
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F37F2.2 Aff_F37F2.2 P W All gene names: F37F2.2; 1B916; CE32185; WBGene00018159; WP:CE32185
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F42A8.2 Aff_F42A8.2 P W All gene names: tag-55; F42A8.2; F42A8.2.1; F42A8.2.2; F42A8.2.3; 2J642; CE01579; WBGene00006433; WP:CE01579 WormBase description: tag-55/F42A8.2 is orthologous to the human gene SUCCINATE DEHYDROGENASE COMPLEX, SUBUNIT B, IRON SULFUR PROTEIN (SDHB; OMIM:185470), which when mutated leads to extraadrenal pheochromocytoma; F42A8.2 protein is predicted to be mitochondrial. WormBase CDS description: succinate dehydrogenase (ubiquinone) iron sulphur protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

F43D2.1 Aff_F43D2.1 P W All gene names: F43D2.1; 5P93; CE38186; WBGene00009650; WP:CE38186 WormBase description: G1/S-specfic cyclin C like
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig2 cyclin-genes,                              
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F43E2.8 Aff_F43E2.8 P W All gene names: hsp-4; F43E2.8; F43E2.8.1; F43E2.8.2; 2H640; CE07244; NM_063135; WBGene00002008; WP:CE07244 WormBase description: hsp-4 encodes a predicted homolog of the mammalian ER chaperone BiP that affects embryonic and larval viability; expression is most prominent in the spermatheca and transcription of hsp-4 is induced in the gut and in the hypodermis upon ER stress. WormBase CDS description: heat shock protein
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Romagnolo et al 2002  Fig2a heat                                 
                                              shock, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 UPR genes                                              

F43G6.9 Aff_F43G6.9 P W All gene names: patr-1; F43G6.9; F43G6.9.1; F43G6.9.2; 2M66; CE18675; NM_064113; WBGene00009661; WP:CE18675
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

F43G9.2 Aff_F43G9.2 P W All gene names: F43G9.2; 1J185; CE10356; WBGene00009665; WP:CE10356
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F44E2.7 Aff_F44E2.7 P W All gene names: F44E2.7; F44E2.7b.1; F44E2.7b.2; F44E2.7b.3; F44E2.7b.4; F44E2.7b.5; 3J936; CE24975; CE29802; CE30994; CE30995; WBGene00018420; WP:CE24975; WP:CE29802; WP:CE30994; WP:CE30995
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Jones et al 2001  Non dauer                             
                                              genes P<0.05, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004,                                
                                              list of genes in cluster E, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated                                                                  

F45B8.2 Aff_F45B8.2 P W All gene names: rgs-10; tag-215; F45B8.2; CE10430; NM_078081; WBGene00004353; WBGene00009719; WP:CE10430; XP581 WormBase description: phosphoprotein RGP4 like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol                                                                        

F45D3.5 Aff_F45D3.5 P W All gene names: sel-1; sup-25; F45D3.5; F45D3.5.1; F45D3.5.2; 5N43; CE16043; NM_073743; WBGene00004759; WP:CE16043 WormBase description: sel-1 encodes two isoforms of a highly conserved transmembrane protein orthologous to human SEL1 (OMIM:602329) and Saccharomyces cerevisiae HRD3, a member of the HMG-CoA Reductase Degradation (HRD) complex that degrades malfolded endoplasmic reticulum (ER)-resident proteins; SEL-1 functions as a negative regulator of the LIN-12/GLP-1 Notch-like signaling pathway in C. elegans where it appears to function cell autonomously to regulate LIN-12 turnover; along with ABU-1, an ER-associated Type I transmembrane protein, SEL-1 may be a component of a cell survival pathway induced when unfolded proteins accumulate in the ER; SEL-1 is expressed throughout larval and adult stages of development, and detected in all tissues except the pharynx; within cells, SEL-1 appears to localize to intracellular vesicles, consistent with its proposed role in protein turnover. WormBase CDS description: Yeast hypothetical gene L8167.5 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              ViswanathanM et al 2005  S2 UPR genes                                              

F49H12.6 Aff_F49H12.B P W All gene names: acl-4; F49H12.6; F49H12.6a.1; F49H12.6a.2; CE23754; CE30138; NM_075978; NM_075979; WBGene00018657; WP:CE23754; WP:CE30138; XC686
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F52C6.11 Aff_F52C6.11 P W All gene names: bath-2; F52C6.11; 2C178; CE35974; WBGene00018668; WP:CE35974
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, Fig2b shared gemlines,                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F53A2.8 Aff_F53A2.8 P W All gene names: cup-6; mtm-6; F53A2.8; F53A2.8b.1; F53A2.8b.2; 3O443; CE16100; CE32050; CE37116; NM_067352; NM_181951; WBGene00003478; WP:CE16100; WP:CE32050; WP:CE37116 WormBase description: mtm-6 encodes a myotubularin-related protein that regulates phosphoinositide 3-phosphate localization and/or levels in vivo and mutation blocks endocytosis by coelomocytes; the MTM-6A isoform, which rescues the endocytic defect of mtm-6 mutants, is believed to function as part of a complex with MTM-9 and MTM-6A is predominantly localized to the coelomocyte cytoplasm, with some localization to the coelomocyte membrane.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F55H2.2 Aff_F55H2.2 P W All gene names: vha-14; F55H2.2; F55H2.2.1; F55H2.2.2; 3K599; CE00209; NM_066693; WBGene00010130; WP:CE00209 WormBase description: Membrane-associated atpase gamma chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F56D2.1 Aff_F56D2.1 P W All gene names: F56D2.1; F56D2.1.1; F56D2.1.2; 3G683; CE11226; WBGene00018963; WP:CE11226 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Mitochondrial processing protease enhancing protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F56H1.4 Aff_F56H1.4 P W All gene names: rpt-5; F56H1.4; F56H1.4.1; F56H1.4.2; 1G318; CE17915; NM_059271; WBGene00004505; WP:CE17915 WormBase description: rpt-5 encodes a triple A ATPase subunit of the 26S proteasome's 19S regulatory particle (RP) base subcomplex; RPT-5 is required for embryonic, larval, and germline development and by homology, is predicted to function in unfolding protein substrates and translocating them into the core proteolytic particle (CP) of the proteasome. WormBase CDS description: ATPase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, list of genes in cluster F, Reinke et al 2004, wt                            
                                              vs glp-4 enriched genes, Reinke et al 2004, list of                                
                                              genes in cluster order, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

F57C9.5 Aff_F57C9.5 P W All gene names: htp-3; F57C9.5; 1F397; CE11330; NM_059057; WBGene00002034; WP:CE11330
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, list of                             
                                              genes in cluster order, Reinke et al 2004, wt males vs                             
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, Reinke et al 2004, list of genes in                             
                                              cluster E                                                                          

F58A4.10 Aff_F58A4.10 P W All gene names: ubc-7; F58A4.10; F58A4.10.1; F58A4.10.2; 3K720; CE00216; NM_066732; WBGene00006704; WP:CE00216 WormBase description: Ubiquitin conjugating enzyme
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F58A4.8 Aff_F58A4.8 P W All gene names: sas-3; tbg-1; F58A4.8; F58A4.8.1; F58A4.8.2; 3K716; CE00224; NM_066730; TUBG; WBGene00006540; WP:CE00224 WormBase description: tbg-1 encodes gamma-tubulin; in C. elegans, tbg-1 activity is essential and is required for normal bipolar spindle assembly and function, as well as the fast phase of female pronuclear migration following fertilization; while tbg-1 is required for proper organization and function of kinetochore and interpolar microtubules, it does not appear to be absolutely required for microtubule nucleation and growth; TBG-1 localizes to centrosomes in both interphase and mitotic cells, exhibiting a dynamic behavior during mitosis that differs between anterior and posterior centrosomes. WormBase CDS description: Gamma-like tubulin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F58H1.3 Aff_F58H1.3 P W All gene names: F58H1.3; 5M415; CE39510; WBGene00010286; WP:CE39510 WormBase description: E-1 enzyme
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, mixed oogenesis soma, ViswanathanM et al 2005                             
                                              S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol                                                                 

H04M03.3 Aff_H04M03.E P W All gene names: H04M03.3; H04M03.E; 4G657; CE20922; WBGene00019153; WP:CE20922
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

H12I13.4 Aff_H12I13.A P W All gene names: fbf-1; H12I13.4; H12I13.A; 2G370; CE20960; NM_062815; WBGene00001401; WP:CE20960 WormBase description: fbf-1 encodes an RNA-binding protein that is one of 11 C. elegans members of the PUF family (Pumilio and FBF) of translational regulators; FBF-1 is nearly identical to FBF-2 with which it is largely redundant in regulating two aspects of germline development: 1)maintenance of stem cell proliferation, and 2)the hermaphroditic switch between spermatogenesis and oogenesis; in maintaining germline stem cells, the FBF proteins, acting through NOS-3, negatively regulate the activity of gld-1 mRNA, which encodes a translational repressor required for meiotic entry; in regulating the sperm-to-oocyte switch, the FBFs act downstream of GLD-3 to negatively regulate the activity of fem-3 mRNA, which encodes a novel protein required for germline sex determination; consistent with their role in germline development, FBF-1 and FBF-2 are expressed in the germline cytoplasm, becoming enriched in the mitotic region during the L4 larval and adult stages. WormBase CDS description: RNA-binding protein
H26D21.1 Aff_H26D21.B P W All gene names: dam-1; hus-1; H26D21.1; H26D21.B; 1E267; CE20999; NM_058802; WBGene00002042; WP:CE20999 WormBase description: hus-1 encodes the C. elegans ortholog of the Schizosaccharomyces pombe Hus1 DNA damage checkpoint protein; in C. elegans, hus-1 activity is required for DNA damage-induced cell cycle arrest and apoptosis, telomere maintenance, and hence, genome stability and development; specifically, hus-1 is required for the CEP-1/p53-dependent increase in germline egl-1 expression following irradiation; a HUS-1::GFP fusion protein is detected in the nuclei of mitotic and meiotic germ cells, mature oocytes, embryos, and somatic larval cells, particularly those that are proliferating; while HUS-1 localization is generally diffuse throughout these nuclei, following irradiation, HUS-1 localizes to discrete foci that overlap with chromatin; HUS-1 nuclear localization is dependent upon the Rad9 homologue HPR-9 and upon the checkpoint protein MRT-2, with which it interacts in yeast two-hybrid and in vitro assays.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

H38K22.3 Aff_H38K22.3 P W All gene names: tag-131; H38K22.3; 3F409; CE18831; WBGene00006478; WP:CE18831
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S7 SAGE                               
                                              genes in the dataset, Wang et al 2003  S8 SAGE genes in                            
                                              the dauer exit                                                                     

K01A6.2 Aff_K01A6.1 P W All gene names: magi-1; K01A6.2; 4M493; CE37387; WBGene00010444; WP:CE37387 WormBase description: membrane-associated guanylate kinase homolog (MAGUK)
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

K02B12.7 Aff_K02B12.7 P W All gene names: K02B12.7; 1J104; CE11618; WBGene00010500; WP:CE11618 WormBase description: ADP-ribosylation factor 1-directed GTPase activating protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

K02F3.10 Aff_K02F3.10 P W All gene names: K02F3.10; 3B468; CE01346; WBGene00019333; WP:CE01346
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

K05C4.2 Aff_Y105E8A.KK P W All gene names: K05C4.2; K05C4.2.1; K05C4.2.2; 1P312; CE19970; WBGene00010579; WP:CE19970
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

K07E8.7 Aff_K07E8.7 P W All gene names: K07E8.7; 2A932; CE11898; WBGene00019498; WP:CE11898 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

K08D10.4 Aff_K08D10.4 P W All gene names: rnp-2; K08D10.4; 4E937; CE28597; NM_068103; WBGene00004385; WP:CE28597 WormBase description: U1 small nuclear ribonucleoprotein A
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

K08H10.1 Aff_K08H10.1 P W All gene names: lea-1; K08H10.1; K08H10.1.1; K08H10.1.2; 5K507; CE18875; NM_073174; WBGene00002263; WP:CE18875; lea WormBase description: The lea-1 gene encodes a protein that is predicted to be hydrophilic and heat-resistant, and that might participate in anhydrobiosis.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

K08H10.7 Aff_K08H10.7 P W All gene names: rde-1; K08H10.7; 5K468; CE28243; NM_171525; WBGene00004323; WP:CE28243
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

K11D12.2 Aff_K11D12.2 P W All gene names: pqn-51; K11D12.2; K11D12.2.1; K11D12.2.2; K11D12.2.3; K11D12.2.4; 5F529; CE12128; NM_071954; WBGene00004136; WP:CE12128 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

K12H4.4 Aff_K12H4.4 P W All gene names: phi-20; K12H4.4; K12H4.4.1; K12H4.4.2; 3J133; CE00269; WBGene00019679; WP:CE00269 WormBase description: Signal peptidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b secretion,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

M142.8 Aff_M142.5 P W All gene names: M142.8; 3M25; CE37540; WBGene00043057; WP:CE37540
M7.1 Aff_M7.1 P W All gene names: let-70; ubc-2; M7.1; 4L846; CE03482; NM_069664; WBGene00002344; WP:CE03482 WormBase description: let-70 encodes a class I E2 ubiquitin conjugating enzyme; let-70 was identified in screens for essential genes and phenotypic analyses indicate that loss of let-70 activity results in embryonic and larval lethality with defects in sarcomere assembly; purified LET-70 can stimulate the self-ubiquitylation activities of CHN-1 and UFD-2, E4 ubiquitin conjugation factors and, in addition, can stimulate the CHN-1- and UFD-2-dependent multiubiquitylation of UNC-45, a myosin-directed chaperone; in this manner, LET-70 may regulate UNC-45 degradation and myosin assembly; RNA blot analyses and a let-70-lacZ reporter fusion reveal that let-70 is abundantly expressed at all stages of development, including the dauer larval stage; strong staining is observed in most somatic tissues until adult stages, when expression generally becomes restricted to the nervous system. WormBase CDS description: ubiquitin-conjugating enzyme E2-17 KD
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Roy et al 2002  S3 muscle genes, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

M70.4 Aff_M70.4 P W All gene names: M70.4; 4D18; CE37266; WBGene00019786; WP:CE37266 WormBase description: M70.4 is orthologous to human O-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE (FLJ20277; OMIM:606822), which when mutated leads to muscle-eye-brain disease.
R03A10.4 Aff_R03A10.4 P W All gene names: R03A10.4; R03A10.4a.1; R03A10.4a.2; R03A10.4b.1; R03A10.4b.2; CE29335; CE37983; WBGene00010984; WP:CE29335; WP:CE37983; XQ61 WormBase description: gluamine-phenylpyruvate transaminase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R07H5.2 Aff_R07H5.2 P W All gene names: cpt-2; R07H5.2; R07H5.2.1; R07H5.2.2; 4L947; CE18907; WBGene00011122; WP:CE18907 WormBase description: R07H5.2 is orthologous to the human gene CARNITINE PALMITOYLTRANSFERASE II (CPT2; OMIM:600650), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

R11E3.7 Aff_R11E3.7 P W All gene names: dpf-7; R11E3.7; 4F564; CE19549; CE31721; NM_171328; NM_171329; WBGene00001060; WP:CE19549; WP:CE31721
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

R151.6 Aff_R151.6 P W All gene names: R151.6; R151.6.1; R151.6.2; 3I312; CE39620; WBGene00020109; WP:CE39620
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Wang et al 2003  S5 genes common                             
                                              to feeding ANOVA, Wang et al 2003  S3  genes pass                                  
                                              one-way ANOVA                                                                      

R151.8 Aff_R151.8 P W All gene names: R151.8; 3I318; CE27201; WBGene00020111; WP:CE27201
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

R166.2 Aff_R166.2 P W All gene names: R166.2; R166.2.1; R166.2.2; 2K826; CE03581; WBGene00011302; WP:CE03581
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

T01B7.3 Aff_T01B7.3 P W All gene names: rab-21; T01B7.3; 2J2; CE03587; NM_063453; WBGene00004279; WP:CE03587 WormBase description: ras-related protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, intrinsic, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

T04A8.16 Aff_T04A8.16 P W All gene names: clp-2; T04A8.16; 3F790; CE01070; NM_065563; WBGene00000543; WP:CE01070 WormBase description: clp-2 encodes a large calpain subunit that contains two predicted MIT (microtubule interacting and trafficking) domains and is homologous to the mammalian Calpain 7 proteins and the atypical, nuclear-localized Aspergillus calpain, PalB; by homology, CLP-2 is predicted to function as a calcium-dependent, cysteine protease that is involved in intracellular proteolysis and peptidolysis; however, as loss of clp-2 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of CLP-2 in C. elegans development and/or behavior is not yet known. WormBase CDS description: Calpain thiol protease
T05B9.1 Aff_T05B9.1 P W All gene names: T05B9.1; 2L548; CE02310; WBGene00011464; WP:CE02310
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

T05E7.3 Aff_T05E7.3 P W All gene names: T05E7.3; 1G767; CE13235; WBGene00020259; WP:CE13235
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

T05H10.6 Aff_T05H10.6 P W All gene names: T05H10.6; T05H10.6a.1; T05H10.6a.2; T05H10.6a.3; T05H10.6a.4; T05H10.6b.1; T05H10.6b.2; CE01643; CE32929; NM_063292; NM_182153; WBGene00011510; WP:CE01643; WP:CE32929 WormBase description: T05H10.6 encodes an ortholog of the human gene PYRUVATE DEHYDROGENASE (LIPOAMIDE) ALPHA 1 (PDHA1; OMIM:312170), which when mutated leads to Leigh syndrome (OMIM:256000); the T05H10.6 protein is predicted to be mitochondrial with 68% accuracy.
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , McCarroll et al 2004  SFig5                                   
                                              conserved w/ yeast, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

T05H4.13 Aff_T05H4.13 P W All gene names: alh-4; T05H4.13; T05H4.13c.1; T05H4.13c.2; 5G908; CE27441; CE30827; CE33307; NM_072233; NM_171471; NM_171472; WBGene00000110; WP:CE27441; WP:CE30827; WP:CE33307 WormBase description: aldehyde dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T05H4.14 Aff_T05H4.14 P W All gene names: gad-1; tag-86; T05H4.14; 5G912; CE13295; NM_072234; WBGene00001513; WP:CE13295 WormBase description: The gad-1 gene encodes a WD repeat-containing protein that is required maternally for gastrulation initiation during early embryogenesis by regulating the division timing, spindle orientation, and subsequent inward migration of the two gut precusor (E) cells at the 26-cell stage.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T06D8.8 Aff_T06D8.8 P W All gene names: rpn-9; T06D8.8; T06D8.8.1; T06D8.8.2; 2L528; CE02329; NM_064004; WBGene00004465; WP:CE02329 WormBase description: rpn-9 is predicted to encode a non-ATPase subunit of the 19S regulatory complex of the proteasome that that affects body morphology, embryonic viability, locomotion, larval viability, fertility, and growth; interacts with RPN-11 in yeast two-hybrid assays.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, ViswanathanM et al 2005  S2                               
                                              sir-2.1 regulated                                                                  

T08D2.6 Aff_T08D2.F P W All gene names: T08D2.6; CE21172; WBGene00011611; WP:CE21172; XA805
T09B4.1 Aff_T09B4.1 P W All gene names: T09B4.1; 1G763; CE13457; WBGene00020375; WP:CE13457
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

T10F2.2 Aff_T10F2.2 P W All gene names: T10F2.2; 3G254; CE02041; WBGene00020422; WP:CE02041 WormBase description: T10F2.2 is orthologous to the human gene SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER; ORNITHINE TRANSPORTER) MEMBER 15 (SLC25A15; OMIM:603861), which when mutated leads to disease. WormBase CDS description: Mitochondrial carrier protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

T15B7.2 Aff_T15B7.2 P W All gene names: T15B7.2; T15B7.2.1; T15B7.2.2; 5H319; CE33319; WBGene00020517; WP:CE33319
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, herm soma enriched genes,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T16G1.11 Aff_T16G1.11 P W All gene names: eif-3.K; pqn-69; T16G1.11; 5N435; CE20081; NM_073840; WBGene00001233; WP:CE20081 WormBase description: The protein product of this gene was predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS72 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, Wang et al 2003  S5 genes common to                                   
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

T20F5.6 Aff_T20F5.6 P W All gene names: T20F5.6; T20F5.6.1; T20F5.6.2; 1E490; CE28685; WBGene00020628; WP:CE28685 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

T21C9.12 Aff_T21C9.12 P W All gene names: T21C9.12; 5L81; CE06481; WBGene00011897; WP:CE06481 WormBase description: REV protein (anti-repression transactivator protein)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

T22D1.3 Aff_T22D1.3 P W All gene names: T22D1.3; T22D1.3b.1; T22D1.3b.2; 4H681; CE30188; CE33940; WBGene00020682; WP:CE30188; WP:CE33940 WormBase description: inosine monophosphate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, Reinke et al 2004, herm soma enriched genes,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

T22F3.2 Aff_T22F3.2 P W All gene names: T22F3.2; 5E67; CE13964; CE30837; WBGene00020695; WP:CE13964; WP:CE30837
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

T23B12.4 Aff_T23B12.4 P W All gene names: T23B12.4; 5I945; CE29351; WBGene00020719; WP:CE29351
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T23D8.4 Aff_T23D8.4 P W All gene names: eif-3.C; T23D8.4; T23D8.4.1; T23D8.4.2; 1K554; CE18958; NM_060237; WBGene00001226; WP:CE18958
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

T26A5.3 Aff_T26A5.3 P W All gene names: tag-99; T26A5.3; 3H557; CE00702; WBGene00006463; WP:CE00702 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: NADH-ubiquinone oxidoreductase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T28A8.4 Aff_T28A8.4 P W All gene names: T28A8.4; 3O593; CE18975; WBGene00012110; WP:CE18975
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

T28F3.1 Aff_F26D10.4 P W All gene names: T28F3.1; 4S226; CE09683; CE19806; WBGene00012128; WP:CE09683; WP:CE19806 WormBase description: C2 domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Shen et al 2005  T1 hif-1                            
                                              depend hypoxia, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

VF11C1L.1 Aff_VF11C1L.1 P W All gene names: ppk-3; C05E7.5; VF11C1L.1; CE18979; NM_077754; WBGene00004089; WP:CE18979; XN588 WormBase description: FYVE zinc finger
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

VW02B12L.3 Aff_VW02B12L.3 P W All gene names: ebp-2; VW02B12L.3; VW02B12L.3.1; VW02B12L.3.2; 2L733; CE18982; WBGene00012156; WP:CE18982
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order                                                     

W02A11.3 Aff_W02A11.3 P W All gene names: W02A11.3; W02A11.3.1; W02A11.3.2; 1N331; CE18990; WBGene00012194; WP:CE18990 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

W02B12.10 Aff_W02B12.10 P W All gene names: W02B12.10; 2L762; CE03770; WBGene00012205; WP:CE03770 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

W04B5.5 Aff_W04B5.5 P W All gene names: W04B5.5; 3D502; CE20142; PIAK; WBGene00021022; WP:CE20142 WormBase description: The W04B5.5 gene encodes a phospholipid-independent AKT/PKB kinase. WormBase CDS description: protein kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

W09B6.4 Aff_W09B6.4 P W All gene names: W09B6.4; 2B424; CE39038; CE39801; WBGene00021104; WP:CE39038; WP:CE39801
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

Y113G7A.9 Aff_Y113G7A.K P W All gene names: dcs-1; hsl-1; Y113G7A.9; 5U558; CE23280; DcpS; NM_075475; WBGene00000940; WP:CE23280
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

Y14H12B.2 Aff_Y14H12B_90.A P W All gene names: Y14H12B.2; 2E222; CE21366; WBGene00021192; WP:CE21366
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              F, Reinke et al 2004, Fig2b shared gemlines, Reinke et                             
                                              al 2004, list of genes in cluster order, Reinke et al                              
                                              2004, intrinsic, Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

Y18H1A.4 Aff_Y18H1A_68.E P W All gene names: Y18H1A.4; 1B166; CE29367; WBGene00021210; WP:CE29367
Y19D10A.16 Aff_C01B4.H P W All gene names: Y19D10A.16; WBGene00044734
Y23H5A.2 Aff_Y23H5A.2 P W All gene names: Y23H5A.2; 1D191; CE18358; WBGene00021269; WP:CE18358
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y23H5A.3 Aff_Y23H5A.3 P W All gene names: Y23H5A.3; 1D189; CE18359; WBGene00021270; WP:CE18359
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

Y32B12B.4 Aff_Y32B12B.4 P W All gene names: Y32B12B.4; 5R43; CE24197; WBGene00012524; WP:CE24197
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen                                                       

Y37D8A.2 Aff_Y37D8A.2 P W All gene names: Y37D8A.2; Y37D8A.2.1; Y37D8A.2.2; 3N913; CE20207; WBGene00012544; WP:CE20207
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

Y38F1A.2 Aff_Y38F1A.B P W All gene names: Y38F1A.2; Y38F1A.B; 2N247; CE21607; WBGene00012606; WP:CE21607 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

Y39E4A.3 Aff_Y39E4A.3 P W All gene names: Y39E4A.3; Y39E4A.3a.1; Y39E4A.3a.2; Y39E4A.3a.3; 3O58; CE33866; CE38987; WBGene00012713; WP:CE33866; WP:CE38987 WormBase description: Y39E4A.3 is orthologous to the human gene MAPLE SYRUP URINE DISEASE, TYPE IA (MSUD, TYPE IA; E1-alpha subunit of branched-chain keto acid dehydrogenase; OMIM:248600), which when mutated leads to maple syrup urine disease; Y39E4A.3 protein is predicted to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Wang et al 2003  S4 Climbing,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

Y39H10A.7 Aff_Y39H10A_224.A P W All gene names: chk-1; Y39H10A.7; Y39H10A.7b.1; Y39H10A.7b.2; Y39H10A_224.A; 5E232; CE26076; CE33867; WBGene00000498; WP:CE26076; WP:CE33867 WormBase description: chk-1 encodes a CHK1-like serine threonin protein kinase that affects fertility.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, male germline, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, herm                              
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, Wang et al 2003  S6 removed genes of                            
                                              contamination                                                                      

Y41C4A.9 Aff_Y41C4A.9 P W All gene names: Y41C4A.9; Y41C4A.9.1; Y41C4A.9.2; Y41C4A.9.3; 3M800; CE20249; WBGene00012756; WP:CE20249
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

Y43C5A.5 Aff_Y43C5A.5 P W All gene names: thk-1; Y43C5A.5; 4L44; CE19154; NM_069485; WBGene00006568; WP:CE19154 WormBase description: thymidine kinases
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 daf-16                             
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

Y43C5A.6 Aff_Y43C5A.6 P W All gene names: rad-51; rdh-1; Y43C5A.6; 4L46; CE25285; CE29064; NM_069486; WBGene00004297; WP:CE25285; WP:CE29064; rad51 WormBase description: rad-51 encodes two isoforms of a protein orthologous to S. cerevisiae Rad51p and Dmc1p, and to E. coli RecA, and paralogous to C30A5.2; RAD-51 proteins are probably required for meiotic recombination; while dispensable for viability and meiotic synapsis, RAD-51A/B are required for normal chromosomal morphology, univalent formation, dissociation of chiasmata, hyperresistance of meiotic pachytene nuclei to X-irradiation, and the progress of oocytes through diakinesis; RAD-51A/B require CHK-2, MRE-11, and SPO-11 to localize to foci in late zygotene/early pachytene nuclei, and genetically acts downstream of CHK-2 and SPO-11; RAD-51A/B foci later disappear from homologously synapsed chromosomes.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

Y45F3A.9 Aff_Y45F3A.9 P W All gene names: Y45F3A.9; CE19170; WBGene00012864; WP:CE19170 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: SpoU rRNA Methylase family
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, ViswanathanM et al 2005  S2 sir-2.1 regulated                            

Y47D3A.4 Aff_Y47D3A.G P W All gene names: cku-70; Y47D3A.4; 3M257; CE28984; NM_067037; WBGene00000519; WP:CE28984
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

Y48A5A.1 Aff_Y48A5A.C P W All gene names: Y48A5A.1; 4C733; CE37290; WBGene00021655; WP:CE37290
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

Y48B6A.12 Aff_Y119D3_452.A P W All gene names: Y48B6A.12; Y48B6A.12.1; Y48B6A.12.2; Y48B6A.12.3; 2O518; CE22127; WBGene00012983; WP:CE22127
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y48C3A.18 Aff_Y48C3A.T P W All gene names: Y48C3A.18; 2N703; CE22152; WBGene00012997; WP:CE22152
Y49E10.1 Aff_Y49E10.C P W All gene names: rpt-6; Y49E10.1; Y49E10.B; Y49E10.C; 3N461; CE22219; NM_067208; WBGene00004506; WP:CE22219 WormBase description: rpt-6 encodes a triple A ATPase that is a subunit of the 26S proteasome 19S regulatory particle (RP) base subcomplex; RPT-6 is required for embryonic and larval development and by homology, is predicted to function in unfolding protein substrates and translocating them into the core proteolytic particle (CP) of the proteasome. WormBase CDS description: ATPases associated with various cellular activities (AAA)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, Romagnolo et al 2002  Fig3b Unkown,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y53G8AL.2 Aff_Y53G8A_9248.D P W All gene names: Y53G8AL.2; Y53G8AL.2.1; Y53G8AL.2.2; 3E332; CE26163; WBGene00021800; WP:CE26163
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S5 genes common to feeding ANOVA, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

Y54G2A.4 Aff_Y94H6A_148.V P W All gene names: Y54G2A.4; Y94H6A_148.I; 4D701; CE31654; WBGene00021870; WP:CE31654
Y55F3AM.13 Aff_Y55F3A_748.B P W All gene names: Y55F3AM.13; 4B808; CE22542; WBGene00021930; WP:CE22542
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

Y56A3A.17 Aff_Y56A3A.P P W All gene names: npp-16; Y56A3A.17; 3N7; CE22584; CE22585; CeNup50; NM_067149; NM_067150; WBGene00003802; WP:CE22584; WP:CE22585
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

Y57E12AL.5 Aff_Y57E12_247.D P W All gene names: let-425; mdt-6; med-6; Y57E12AL.5; Y57E12_247.D; 5H538; CE25510; NM_072390; WBGene00003164; WP:CE25510 WormBase description: mdt-6 encodes a highly conserved transcriptional mediator of the Med6 family that includes Saccharomyces cerevisiae Med6 and human MED6 (OMIM:602984); MDT-6 is an essential gene required maternally for embryogenesis and zygotically for postembryonic transcriptional regulation of genes involved in the Ras and Wnt signaling pathways that mediate vulval and male tail formation, respectively; mdt-6 is expressed in all cells at all stages and localizes to the peripheral region of nuclei, where actively transcribed portions of the genome may be localized.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

Y57G11C.12 Aff_Y57G11C.12 P W All gene names: nuo-3; Y57G11C.12; Y57G11C.12.1; Y57G11C.12.2; Y57G11C.12.3; Y57G11C.12.4; 4P560; CE14948; WBGene00013308; WP:CE14948 WormBase description: NADH-ubiquinone oxidoreductase
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , McCarroll et al 2004  SFig1-4                                 
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

Y73F8A.34 Aff_Y73F8A.NN P W All gene names: tag-349; Y73F8A.34; Y73F8A.34a.1; Y73F8A.34a.2; Y73F8A.34b.1; Y73F8A.34b.2; 4Q290; CE25598; CE39877; WBGene00013538; WP:CE25598; WP:CE39877
Y75B8A.14 Aff_Y75B8A.R P W All gene names: Y75B8A.14; 3N306; CE23026; WBGene00013550; WP:CE23026
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes                                                     

Y77E11A.11 Aff_Y77E11A_3443.L P W All gene names: clp-7; Y77E11A.11; Y77E11A.11.1; Y77E11A.11.2; 4C200; CE25612; NM_067681; WBGene00000547; WP:CE25612 WormBase description: clp-7 encodes a member of the calpain family of cysteine proteases.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

ZC53.7 Aff_ZC53.7 P W All gene names: rgs-9; ZC53.7; CE07589; NM_075949; WBGene00004352; WBGene00022513; WP:CE07589; XC535
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

ZK1248.13 Aff_ZK1248.12 P W All gene names: ZK1248.13; 2G120; CE33497; WBGene00022882; WP:CE33497
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

ZK1320.6 Aff_ZK1320.6 P W All gene names: arc-1; arl-4; ZK1320.6; 2J967; CE37598; NM_063688; WBGene00000180; WP:CE37598 WormBase description: arc-1 encodes a member of the ARL (ADP-ribosylation factor(ARF)-like) family of proteins which are very similar to ARF proteins but lack the ability to stimulate ADP ribosylation by cholera toxin; arc-1 has a human homolog, MID1, which when mutated leads to Opitz syndrome (OMIM:300000). WormBase CDS description: ADP-ribosylation factors (Arf family) (contains ATP/GTP binding P-loop), Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

ZK353.8 Aff_ZK353.8 P W All gene names: ubxn-4; ZK353.8; ZK353.8.1; ZK353.8.2; 3J494; CE00392; WBGene00022703; WP:CE00392
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

ZK512.5 Aff_ZK512.5 P W All gene names: ZK512.5; ZK512.5.1; ZK512.5.2; 3K219; CE00411; WBGene00013985; WP:CE00411
ZK675.1 Aff_ZK675.1 P W All gene names: ptc-1; ZK675.1; ZK675.1.1; ZK675.1.2; 2I189; CE01720; NM_063261; WBGene00004208; WP:CE01720 WormBase description: ptc-1 is orthologous to Drosophila patched and human PTC; mutation of human PTC leads to nevoid basal cell carcinoma syndrome (OMIM:109400). WormBase CDS description: membrane protein patched
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

ZK809.4 Aff_ZK809.4 P W All gene names: ent-1; ZK809.4; 4M418; CE31754; NM_069803; WBGene00001320; WP:CE31754 WormBase description: ent-1 encodes a predicted equilibrative nucleoside transporter 1 that affects growth. WormBase CDS description: hydrophobic nucleolar protein like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

ZK829.9 Aff_ZK829.9 P W All gene names: ZK829.9; 4M735; CE06657; WBGene00014097; WP:CE06657 WormBase description: glucose transporter
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

ZK970.3 Aff_ZK970.3 P W All gene names: mdt-22; ZK970.3; 2K591; CE02403; NM_063815; WBGene00007022; WP:CE02403
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes