Hill et al 2000, developmentally modulated cluster, 136 genes

Gene list file name:Hill2000_T1_cluster1-3.txt
Type of gene identifier:Affymetrix custom chip
Description:Hill et al 2000, Supplymental Dataset, developmentally modulated genes cluster(1,3)  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AFF_C17F4.5 Aff_C17F4.5 P W
AFF_R10H1.1 Aff_R10H1.1 P W
AFF_Y105E8A.L Aff_Y105E8A.L P W
B0024.9 Aff_B0024.9 P W All gene names: B0024.9; B0024.9.1; B0024.9.2; 5K795; CE05153; WBGene00007099; WP:CE05153 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: thioredoxin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

B0218.8 Aff_B0218.8 P W All gene names: clec-52; B0218.8; 4I932; CE06691; WBGene00015052; WP:CE06691 WormBase description: 7TM chemoreceptor, clec family
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ReichertK et al 2005  T2 xenobiotic                             
                                              induced C-type, Reinke et al 2004, herm soma enriched                              
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

B0379.1 Aff_B0379.1 P W All gene names: B0379.1; 1K653; CE20452; WBGene00007155; WP:CE20452
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

C03F11.3 Aff_C03F11.3 P W All gene names: C03F11.3; CE37606; WBGene00015389; WP:CE37606; XG16 WormBase description: glycoprotein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

C05C10.4 Aff_C05C10.4 P W All gene names: C05C10.4; 2K223; CE17370; WBGene00007331; WP:CE17370 WormBase description: acid phosphatase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, McElwee et al 2003  T1 targets of                                  
                                              daf-16, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

C05E11.5 Aff_C05E11.5 P W All gene names: amt-4; C05E11.5; CE27655; NM_076382; WBGene00000136; WP:CE27655; XF187 WormBase description: amt-4 encodes a member of the ammonium transporter protein family. WormBase CDS description: ammonium transporter
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, herm soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C06H5.1 Aff_C06H5.1 P W All gene names: C06H5.1; 5S376; CE27668; WBGene00007392; WP:CE27668 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

C09G5.4 Aff_C09G5.4 P W All gene names: col-39; C09G5.4; 2K995; CE01484; NM_063908; WBGene00000616; WP:CE01484 WormBase description: col-39 encodes a collagen that is individually dispensable for viability and gross morphology in mass RNAi screens; the amino- and carboxyl-terminal cysteine-rich regions of COL-39 are most closely related to those of COL-8, COL-19, and COL-35. WormBase CDS description: collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C12D12.1 Aff_C12D12.1 P W All gene names: C12D12.1; CE27679; CE29576; WBGene00015713; WP:CE27679; WP:CE29576; XE123
C16H3.2 Aff_C16H3.2 P W All gene names: lec-9; C16H3.2; CE08236; NM_078443; WBGene00002272; WP:CE08236; XS215 WormBase description: lec-9 encodes a predicted lectin that affects embryonic viability. WormBase CDS description: sugar-binding protein
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C18B2.5 Aff_C18B2.5 P W All gene names: C18B2.5; C18B2.5a.1; C18B2.5a.2; CE04044; CE30872; WBGene00015956; WP:CE04044; WP:CE30872; XE226
C18E9.9 Aff_C18E9.9 P W All gene names: C18E9.9; 2J278; CE05301; WBGene00007689; WP:CE05301
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C26B9.5 Aff_C26B9.5 P W All gene names: C26B9.5; CE04098; WBGene00016134; WP:CE04098; XF949 WormBase description: lysosomal Pro-X carboxypeptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, herm soma enriched genes, Wang et al 2003  S4                             
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

C28C12.7 Aff_C28C12.7 P W All gene names: spp-10; C28C12.7; C28C12.7a.1; C28C12.7a.2; 4J243; CE29486; CE31323; NM_171399; NM_171400; WBGene00004995; WP:CE29486; WP:CE31323 WormBase description: spp-10 encodes two protein isoforms that are orthologous to the human gene PROSAPOSIN (PSAP; OMIM:176801, mutated in Gaucher disease and metachromatic leukodystrophy); SPP-10A and -10B are predicted to have 3 and 4 embedded saposin sequences, that are likely to be split into individual saposin peptides by proteolysis; in mammals, saposins activate the enzymes sphingomyelinphosphodiesterase and beta-glucosylceramidase; spp-10 has no obvious function in mass RNAi assays. WormBase CDS description: 7TM chemoreceptor, spp family
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              fem3 enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C29F3.7 Aff_C29F3.7 P W All gene names: C29F3.7; 5P837; CE31888; WBGene00007807; WP:CE31888
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S4 Early genes, Wang                             
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

C29F7.2 Aff_C29F7.2 P W All gene names: C29F7.2; CE35414; WBGene00007811; WP:CE35414; XO35
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, fem3 enriched genes                                                       

C33C12.3 Aff_C33C12.3 P W All gene names: C33C12.3; 2C471; CE29208; CE39682; WBGene00016335; WP:CE29208; WP:CE39682 WormBase description: glucosylceramidase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

C33H5.13 Aff_C33H5.13 P W All gene names: C33H5.13; 4I556; CE04156; WBGene00016379; WP:CE04156
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C35B8.1 Aff_C35B8.1 P W All gene names: col-175; C35B8.1; CE02534; NM_077154; WBGene00000748; WP:CE02534; XJ852 WormBase description: Cuticle collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, ReichertK et al 2005  T2 xenobiotic induced                                
                                              Collag, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C44B7.10 Aff_C44B7.10 P W All gene names: C44B7.10; C44B7.10.1; C44B7.10.2; C44B7.10.3; C44B7.10.4; 2H180; CE32326; WBGene00016630; WP:CE32326
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C46G7.1 Aff_C46G7.1 P W All gene names: C46G7.1; C46G7.1.1; C46G7.1.2; 4G783; CE37213; WBGene00016721; WP:CE37213
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

C49C3.4 Aff_C49C3.4 P W All gene names: C49C3.4; 4S271; CE19743; WBGene00008194; WP:CE19743 WormBase description: EGF-like domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C50B6.4 Aff_C50B6.4 P W All gene names: col-161; C50B6.4; 5N796; CE08873; NM_073899; WBGene00000734; WP:CE08873 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Jones et al 2001  T3 20 most abundant                                      
                                              Mixed-stage, Reinke et al 2004, list of genes in                                   
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster C, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 LateList                                                       

C52D10.13 Aff_C52D10.13 P W All gene names: col-138; C52D10.13; 4S124; CE17596; NM_070647; WBGene00000711; WP:CE17596 WormBase description: cuticular collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, ReichertK et al 2005  T2 xenobiotic induced                                
                                              Collag, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C56A3.2 Aff_C56A3.2 P W All gene names: C56A3.2; C56A3.2.1; C56A3.2.2; 5O10; CE09030; WBGene00008341; WP:CE09030 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C56G2.6 Aff_C56G2.6 P W All gene names: dhs-10; let-767; C56G2.6; C56G2.6.1; C56G2.6.2; 3H428; CE30639; NM_065985; WBGene00002891; WP:CE30639 WormBase description: let-767 encodes a short-chain dehydrogenase, reported to be required for efficient cholesterol metabolism; LET-767 is predicted to be required for the metabolism of a sterol and to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

D2096.8 Aff_D2096.8 P W All gene names: D2096.8; 4J144; CE04306; WBGene00017075; WP:CE04306
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, mixed oogenesis soma, Reinke et al 2004, GO                               
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

E03H4.10 Aff_E03H4.10 P W All gene names: clec-17; E03H4.10; 1N22; CE20647; WBGene00008477; WP:CE20647 WormBase description: C-type lectin domain
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

F01D5.9 Aff_F01D5.9 P W All gene names: cyp-37A1; F01D5.9; 2O304; CE35449; NM_064538; WBGene00008499; WP:CE35449 WormBase description: Cytochrome P450
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 Cytochrome                                
                                              P450, Reinke et al 2004, list of genes in cluster                                  
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

F01G10.1 Aff_F01G10.1 P W All gene names: F01G10.1; F01G10.1.1; F01G10.1.2; 4L9; CE09163; WBGene00008506; WP:CE09163 WormBase description: The F01G10.1 gene encodes an ortholog of the human gene TRANSKETOLASE (TKT; OMIM:606781), which when mutated leads to Wernicke-Korsakoff syndrome (OMIM:277730). WormBase CDS description: transketolase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F08B6.4 Aff_F08B6.B P W All gene names: unc-87; F08B6.4; F08B6.4c.1; F08B6.4c.2; F08B6.4c.3; 1H338; CE20658; CE27922; CE36924; WBGene00006819; WP:CE20658; WP:CE27922; WP:CE36924 WormBase description: unc-87 encodes, through alternative splicing, two proteins that are required to maintain the structure of myofilaments in body wall muscle cells; UNC-87 proteins resemble the C-terminal repeat region of calponin but have no obvious orthologs outside of nematodes; in vitro, UNC-87 proteins exist as monomers in solution, associate with thin (F-actin) filaments but not with monomeric G-actin, and bundle F-actin filaments; in vivo, UNC-87 proteins reside in the I-band of bodywall muscle, and GFP-tagged UNC-87 associates with actin stress fibers; unc-87 mutants show degeneration of myofilaments, are profoundly immobile, and have noticeable defects in egg-laying; the unc-87 mutant phenotype is partially suppressed by the unc-54(s95) mutation, which lowers myosin activity but leaves myofilaments intact, indicating that UNC-87 prevents damage by mechanical stress on myofilaments.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Aging time course                                
                                              Fig3A muscle, Roy et al 2002  S2 positivecontrol L1                                
                                              muscle, ViswanathanM et al 2005  S2 sir-2.1 regulated,                             
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F11E6.5 Aff_F11E6.5 P W All gene names: elo-2; F11E6.5; 4S410; CE19785; NM_070713; WBGene00001240; WP:CE19785 WormBase description: The elo-2 gene encodes a palmitic acid elongase, homologous to polyunsaturated fatty acid (PUFA) elongases such as ELO-1, that is required for normally rapid growth, normally large body size, fertility, and for the quantitative regulation of the ultradian defecation rhythm; the joint action of ELO-2 with ELO-1 is strongly required for 20-carbon PUFA production and for general viability; elo-2 is most strongly expressed in intestinal cells, as well as other tissues such as the ventral nerve cord, pharyngeal muscles, uterus, and tail. WormBase CDS description: GNS1/SUR4 family
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Reinke et al 2004, herm soma enriched                              
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F14F7.1 Aff_F14F7.1 P W All gene names: col-98; F14F7.1; F14F7.1.1; F14F7.1.2; 3O109; CE15821; NM_067302; WBGene00000673; WP:CE15821 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T2 xenobiotic                               
                                              induced Collag, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F15H10.2 Aff_F15H10.2 P W All gene names: col-13; F15H10.2; 5K902; CE05639; NM_073276; WBGene00000602; WP:CE05639 WormBase description: col-13 encodes a collagen which is expressed in all stages of development, like sqt-3 (col-1), col-3, col-10, col-11, col-12, and col-14; collagen genes with this expression profile may be specifically required to construct the L1 cuticle (and, perhaps, less specifically required for cuticles at other stages); the amino- and carboxyl-terminal cysteine-rich regions of COL-13 are most closely related to those of COL-6, COL-12, COL-14, COL-36, and COL-40. WormBase CDS description: collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F19B2.5 Aff_F19B2.G P W All gene names: F19B2.5; F19B2.C; 5U632; CE20697; WBGene00008944; WP:CE20697
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Zhang et al 2002, T1 mec-3 dependent genes                              

F19C7.1 Aff_F19C7.1 P W All gene names: F19C7.1; 4F371; CE04415; WBGene00017591; WP:CE04415
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F21F8.3 Aff_F21F8.3 P W All gene names: asp-5; F21F8.3; F21F8.3.1; F21F8.3.2; 5I753; CE09539; NM_072734; WBGene00000218; WP:CE09539 WormBase description: protease
F21F8.7 Aff_F21F8.7 P W All gene names: asp-6; F21F8.7; F21F8.7.1; F21F8.7.2; 5I748; CE09542; NM_072732; WBGene00000219; WP:CE09542 WormBase description: aspartic protease. WormBase CDS description: protease
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F22F7.1 Aff_F22F7.1 P W All gene names: F22F7.1; F22F7.1a.1; F22F7.1a.2; 5C603; CE17691; CE32871; WBGene00017719; WP:CE17691; WP:CE32871
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, herm soma                                 
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

F23B2.12 Aff_F23B2.12 P W All gene names: pcp-2; F23B2.12; F23B2.12.1; F23B2.12.2; 4J926; CE09592; NM_069198; WBGene00003957; WP:CE09592 WormBase description: lysosomal carboxypeptidase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              herm soma enriched genes, Romagnolo et al 2002  Fig3b                              
                                              Proteases, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S4 genes pass two-wayANOVA P0                                                     

F26E4.9 Aff_F26E4.9 P W All gene names: cco-1; lpd-4; F26E4.9; F26E4.9.1; F26E4.9.2; F26E4.9.3; 1K365; CE09693; NM_060200; WBGene00000371; WP:CE09693 WormBase description: cytochrome C oxidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F28H1.2 Aff_F28H1.2 P W All gene names: cpn-3; F28H1.2; 1E557; CE09767; NM_058881; WBGene00000779; WP:CE09767 WormBase description: cpn-3 encodes a calponin homolog, most closely related to its paralog CPN-4 in C. elegans; CPN-3 is more similar to the calponin paralogs transgelin (SM22 alpha) or neuronal protein NP25 than to calponin per se. WormBase CDS description: calponin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

F28H7.3 Aff_F28H7.3 P W All gene names: F28H7.3; 5L230; CE05753; WBGene00009237; WP:CE05753 WormBase description: lipase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

F32A5.5 Aff_F32A5.5 P W All gene names: aqp-1; dod-4; F32A5.5; F32A5.5b.1; F32A5.5b.2; 2H526; CE01275; CE29304; NM_063109; NM_182133; WBGene00000169; WP:CE01275; WP:CE29304
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Murphy et al 2003  Fig2 Class1 elongate                            
                                              lifespan, ReichertK et al 2005  T3 xenobiotic                                      
                                              downregulated, Reinke et al 2004, list of genes in                                 
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

F35E12.5 Aff_F35E12.5 P W All gene names: F35E12.5; 5O218; CE38510; WBGene00009429; WP:CE38510
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1 regulated                            

F35H10.11 Aff_F17E9.9 P W All gene names: his-29; F35H10.11; 4J92; NM_069002; WBGene00001903 WormBase description: his-29 encodes an H2B histone. WormBase CDS description: histone H2B
F40F4.2 Aff_F40F4.2 P W All gene names: lbp-2; F40F4.2; CE04532; NM_076157; WBGene00002254; WP:CE04532; XD881 WormBase description: lbp-2 encodes a homolog of the novel fatty acid binding protein, As-p18, found in the parasitic nematode Ascaris suum; As-p18 is a member of a family of small intracellular fatty acid binding proteins (iFABPs); the expression pattern of lpb-2 is consistent with it being secreted into the perienteric fluid where it may play a role in lipid transport beween the intestine and body wall; a lbp-2 promoter::gfp fusion reporter is restricted to body wall muscle cells abutting the pseudocoelom. WormBase CDS description: fatty acid-binding protein
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              fem3 enriched genes, Roy et al 2002  S3 muscle genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F40F4.6 Aff_F40F4.6 P W All gene names: F40F4.6; CE04536; WBGene00018237; WP:CE04536; XD856 WormBase description: EGF-like repeats
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

F41H10.7 Aff_F41H10.7 P W All gene names: elo-5; F41H10.7; 4G140; CE10284; NM_068392; WBGene00001243; WP:CE10284 WormBase description: The elo-5 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; ELO-5 is required for normally rapid growth and for normal fatty acid composition. WormBase CDS description: integral membrane protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F42A10.6 Aff_F42A10.6 P W All gene names: F42A10.6; F42A10.6.1; F42A10.6.2; 3H266; CE01297; WBGene00018342; WP:CE01297
F42D1.2 Aff_F42D1.2 P W All gene names: F42D1.2; F42D1.2.1; F42D1.2.2; CE10298; WBGene00009628; WP:CE10298; XP411 WormBase description: tyrosine aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

F42G4.5 Aff_F42G4.5 P W All gene names: F42G4.5; 2N363; CE35535; WBGene00009642; WP:CE35535
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F43H9.2 Aff_F43H9.2 P W All gene names: sptl-2; F43H9.2; 5I501; CE07246; CE27380; WBGene00018398; WP:CE07246; WP:CE27380 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

F44C4.3 Aff_F44C4.3 P W All gene names: cpr-4; F44C4.3; F44C4.3.1; F44C4.3.2; 5H95; CE07251; NM_072281; WBGene00000784; WP:CE07251 WormBase description: cpr-4 encodes a cathepsin B-like cysteine protease expressed at all life stages. WormBase CDS description: cathepsin B-like cysteine proteinase 4 precursor
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 differentially                              
                                              expressed gen, Reinke et al 2004, list of genes in                                 
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F44F4.11 Aff_F44F4.11 P W All gene names: tba-4; F44F4.11; 2L209; CE18680; NM_063950; WBGene00006530; WP:CE18680 WormBase description: tba-4 encodes a member of the alpha tubulin family that also includes tba-1, tba-2, and tba-3, and affects embryonic viability. WormBase CDS description: tubulin alpha-2 chain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F45F2.3 Aff_F45F2.3 P W All gene names: his-5; F45F2.3; 5J15; NM_072799; WBGene00001879 WormBase description: his-5 encodes an H4 histone. WormBase CDS description: histone H4
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F45F2.4 Aff_F45F2.4 P W All gene names: his-7; F45F2.4; 5J13; NM_072797; WBGene00001881 WormBase description: his-7 encodes an H2A histone. WormBase CDS description: histone H2A
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F46E10.1 Aff_F46E10.L P W All gene names: F46E10.1; F46E10.1c.1; F46E10.1c.2; F46E10.1c.3; 5H11; CE20812; CE37771; CE37772; WBGene00018488; WP:CE20812; WP:CE37771; WP:CE37772 WormBase description: long-chain-fatty-acid-CoA ligase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class2                               
                                              shorten lifespan, Reinke et al 2004, GO categories,                                
                                              Reinke et al 2004, herm soma enriched genes, Wang et al                            
                                              2003  S4 Early genes, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

F49F1.5 Aff_F49F1.5 P W All gene names: F49F1.5; 4E884; CE17088; WBGene00018645; WP:CE17088
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, herm soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F53A9.10 Aff_F53A9.10 P W All gene names: tnt-2; F53A9.10; F53A9.10a.1; F53A9.10a.2; F53A9.10b.1; F53A9.10b.2; F53A9.10b.3; F53A9.10b.4; CE34313; CE34878; WBGene00006587; WP:CE34313; WP:CE34878; XJ340
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster C,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F54C9.4 Aff_F54C9.4 P W All gene names: col-38; F54C9.4; 2I858; CE20864; NM_063409; WBGene00000615; WP:CE20864 WormBase description: col-38 encodes a member of the collagen superfamily containing collagen triple helix repeats (20 copies) required for normal body morphology. WormBase CDS description: collagen
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T2 xenobiotic                               
                                              induced Collag, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F54D8.3 Aff_F54D8.3 P W All gene names: alh-1; F54D8.3; F54D8.3a.1; F54D8.3a.2; F54D8.3b.1; F54D8.3b.2; F54D8.3b.3; 3G169; CE29809; CE32434; NM_065680; NM_181921; WBGene00000107; WP:CE29809; WP:CE32434 WormBase description: alh-1 is orthologous to the human gene ALDEHYDE DEHYDROGENASE 2, MITOCHONDRIAL (ALDH2; OMIM:100650), in which a polymorphism can lead to acute ethanol intolerance.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F55G11.8 Aff_F55G11.8 P W All gene names: F55G11.8; 4N727; CE18754; WBGene00010128; WP:CE18754
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, wt herm vs wt herm                                    
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F55H12.4 Aff_F55H12.4 P W All gene names: F55H12.4; 1J468; CE11212; WBGene00010135; WP:CE11212
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F56B3.1 Aff_F56B3.1 P W All gene names: col-103; F56B3.1; 4B516; CE17882; NM_067581; WBGene00000677; WP:CE17882
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

F56D6.15 Aff_Y46C8_103.A P W All gene names: clec-69; F56D6.15; CE39163; WBGene00044642; WP:CE39163
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan                                                                           

F56D6.2 Aff_F56D6.2 P W All gene names: clec-67; F56D6.2; 4E687; CE31546; WBGene00018971; WP:CE31546
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster B                               

F57F4.3 Aff_F57F4.3 P W All gene names: gfi-1; F57F4.3; 5G882; CE11342; NM_072225; WBGene00001581; WP:CE11342 WormBase description: gfi-1 encodes a protein that contains 21 ET modules; interacts with unc-68 in yeast two-hybrid assays.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, intrinsic, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, list                            
                                              of genes in cluster C                                                              

F57F4.4 Aff_F57F4.4 P W All gene names: F57F4.4; F57F4.4.1; F57F4.4.2; F57F4.4.3; CE11344; NM_072226; WBGene00019017; WP:CE11344
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, intrinsic, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, list                            
                                              of genes in cluster C                                                              

F58A4.7 Aff_F58A4.7 P W All gene names: hlh-11; F58A4.7; F58A4.7a.1; F58A4.7a.2; F58A4.7b.1; F58A4.7b.2; 3K715; CE32193; CE32194; CE34037; CE34038; NM_066728; NM_066729; WBGene00001955; WP:CE32193; WP:CE32194; WP:CE34037; WP:CE34038 WormBase description: Helix-loop-helix DNA-binding domain
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F58F6.1 Aff_F58F6.1 P W All gene names: col-104; F58F6.1; 4C118; CE17136; NM_067669; WBGene00000678; WP:CE17136 WormBase description: cuticular collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

H22K11.1 Aff_H22K11.1 P W All gene names: asp-3; H22K11.1; CE19495; NM_076741; WBGene00000216; WP:CE19495; XH411 WormBase description: asp-3 encodes an aspartyl protease homolog that is required, in parallel with ASP-4 but downstream of CLP-1 and TRA-3, for degenerative (necrotic-like) cell death in neurons induced by mutations such as mec-4(d), deg-3(d), or gsa-1(gf). WormBase CDS description: aspartyl protease
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 differentially                              
                                              expressed gen, Murphy et al 2003  Fig2 Class1 elongate                             
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1 regulated                            

H36L18.2 Aff_H36L18.2 P W All gene names: H36L18.2; H36L18.2.1; H36L18.2.2; CE19945; WBGene00010424; WP:CE19945; XN272
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

K01H12.2 Aff_K01H12.2 P W All gene names: K01H12.2; 4K472; CE03454; WBGene00010485; WP:CE03454 WormBase description: ADP/ATP carrier protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K02D7.1 Aff_K02D7.1 P W All gene names: K02D7.1; 4B46; CE17994; WBGene00019298; WP:CE17994 WormBase description: K02D7.1 is orthologous to the human gene PURINE NUCLEOSIDE PHOSPHORYLASE (NP; OMIM:164050), which when mutated leads to disease. WormBase CDS description: phosphorylase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K02G10.7 Aff_K02G10.7 P W All gene names: aqp-8; K02G10.7; CE34330; CE34331; WBGene00000176; WP:CE34330; WP:CE34331; XF322 WormBase description: transmembrane channel protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 Early genes, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

K04D7.3 Aff_K04D7.3 P W All gene names: gta-1; K04D7.3; 4K947; CE06092; NM_069461; WBGene00001794; WP:CE06092 WormBase description: The gta-1 gene encodes an ortholog of the human gene GABAT, which when mutated leads to GABA-transaminase deficiency (OMIM:137150). WormBase CDS description: 4-aminobutyrate aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K05G3.3 Aff_K05G3.3 P W All gene names: cah-3; K05G3.3; CE04755; NM_078273; WBGene00000281; WP:CE04755; XR103 WormBase description: carbonic anhydrase 2. WormBase CDS description: carbonic anhydrase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

K06G5.1 Aff_K06G5.1 P W All gene names: K06G5.1; K06G5.1a.1; K06G5.1a.2; CE18851; CE37390; WBGene00010605; WP:CE18851; WP:CE37390; XO837
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K09H9.3 Aff_K09H9.3 P W All gene names: col-49; K09H9.3; 1D705; CE18038; NM_058705; WBGene00000626; WP:CE18038 WormBase description: cuticular collagen
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T2 xenobiotic                               
                                              induced Collag, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

K10B3.7 Aff_K10B3.7 P W All gene names: gpd-3; K10B3.7; K10B3.7.1; K10B3.7.2; CE07370; NM_076133; WBGene00001685; WP:CE07370 WormBase description: gpd-3 encodes a predicted glyceraldehyde 3-phosphate dehydrogenase that affects embryonic viability; GPD-3 interacts with LIN-2 in two-hybrid assays.
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              Roy et al 2002  S3 muscle genes, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 LateList, Wang                             
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

K10C2.3 Aff_K10C2.3 P W All gene names: K10C2.3; CE04749; WBGene00019619; WP:CE04749; XH64 WormBase description: aspartyl protease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

K12C11.1 Aff_K12C11.1 P W All gene names: K12C11.1; K12C11.1.1; K12C11.1.2; 1B816; CE26819; WBGene00019673; WP:CE26819 WormBase description: The K12C11.1 gene encodes an ortholog of the human gene PEPTIDASE D (PEPD), which when mutated leads to prolidase deficiency (OMIM:170100).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

LLC1.2 Aff_LLC1.2 P W All gene names: LLC1.2; 4P227; CE16261; WBGene00010793; WP:CE16261
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05                                                                             

M04G12.2 Aff_M04G12.2 P W All gene names: cpz-2; M04G12.2; 5N863; CE12424; NM_073917; WBGene00000789; WP:CE12424 WormBase description: cysteine protease
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

M195.1 Aff_M195.1 P W All gene names: col-77; M195.1; 2I648; CE03514; NM_063358; WBGene00000653; WP:CE03514 WormBase description: cuticle collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Jones et al 2001  T3 20 most abundant                                      
                                              Mixed-stage, Reinke et al 2004, list of genes in                                   
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster C, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 LateList                                                       

M6.1 Aff_M6.1 P W All gene names: ifc-2; M6.1; CE31204; CE31205; CE34062; Cel IF C2; CelIF c2; NM_171613; NM_171614; WBGene00002056; WP:CE31204; WP:CE31205; WP:CE34062; XB262 WormBase description: ifc-2 encodes three isoforms of an intermediate filament protein dispensable for viability but required for normal movement, growth rate, body size, body shape, and cuticle strength; IFC-2 is present in the cytoplasm of intestinal cells, and at the desmosomes of intestinal and pharyngeal cells.
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S4 Early genes, Wang                             
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

R07E3.1 Aff_R07E3.1 P W All gene names: R07E3.1; R07E3.1a.1; R07E3.1a.2; R07E3.1b.1; R07E3.1b.2; CE02295; CE39608; WBGene00011102; WP:CE02295; WP:CE39608; XK958 WormBase description: cysteine proteinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

R10H10.3 Aff_R10H10.3 P W All gene names: R10H10.3; 4L157; CE06294; WBGene00011222; WP:CE06294 WormBase description: CUB domain, von Willebrand factor type A domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

R11H6.1 Aff_R11H6.1 P W All gene names: pes-9; R11H6.1; R11H6.1.1; R11H6.1.2; R11H6.1.3; 5P76; CE12770; NM_074209; WBGene00003982; WP:CE12770 WormBase description: pes-9 encodes a zinc metallopeptidase; pes-9 was originally identified in a promoter trap screen for sequences that direct reporter gene expression in specific cell types during C. elegans development; pes-9 sequences direct expression in a limited number of cells in the early embryo and in putative head and tail hypodermal cells in adults; after some confusion, the pes-9 reporter gene fusion was mapped to R11H6.1. WormBase CDS description: Yeast hypothetical 52.9 KD protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, GO categories, Reinke et al                            
                                              2004, herm soma enriched genes, Wang et al 2003  S4                                
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

R193.2 Aff_C05D9.8 P W All gene names: R193.2; CE37140; WBGene00020128; WP:CE37140; XB752
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, IVb male soma enriched genes, Wang et al 2003  S4                            
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

T01B11.2 Aff_T01B11.2 P W All gene names: T01B11.2; 4J214; CE12894; CE33686; WBGene00020139; WP:CE12894; WP:CE33686 WormBase description: aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, Reinke et al 2004, fem3 enriched                                
                                              genes, Reinke et al 2004, mixed sperm soma, Reinke et                              
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Early genes, Wang et                            
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

T01B11.4 Aff_T01B11.4 P W All gene names: tag-316; T01B11.4; 4J224; CE12898; WBGene00020140; WP:CE12898 WormBase description: ADP/ATP translocase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, spermatogenesis                               
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T02C5.1 Aff_T02C5.1 P W All gene names: T02C5.1; CE04848; CE30117; WBGene00020158; WP:CE04848; WP:CE30117; XD315 WormBase description: The T02C5.1 gene encodes a protein that may be involved in apoptosis; it has some similarity to the tumor necrosis factor (TNF) receptor of vertebrates.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T02G5.7 Aff_T02G5.7 P W All gene names: T02G5.7; CE04859; NM_063055; WBGene00020166; WP:CE04859 WormBase description: The T02G5.7 gene encodes a homolog of the human gene ACAT1, which when mutated leads to alpha-methylacetoaceticaciduria (OMIM:203750). WormBase CDS description: acetoacetyl CoA thiolase
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, Reinke et al 2004, GO categories, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated, Wang et al 2003  S3                              
                                              genes pass one-way ANOVA, Wang et al 2003  S4 Climbing,                            
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

T02G5.8 Aff_T02G5.8 P W All gene names: kat-1; T02G5.8; 2H367; CE29990; NM_063054; WBGene00002183; WP:CE29990 WormBase description: kat-1 encodes a homolog of the human gene ACAT1, which when mutated leads to alpha-methylacetoaceticaciduria (OMIM:203750). WormBase CDS description: acetoacetyl-C0A thiolase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

T02H6.11 Aff_T02H6.A P W All gene names: phi-44; T02H6.11; T02H6.11.1; T02H6.11.2; T02H6.A; 2A990; CE21147; WBGene00020181; WP:CE21147 WormBase description: ubiquinol-cytochrome c reductase complex subunit
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T04B2.5 Aff_T04B2.5 P W All gene names: T04B2.5; T04B2.5.1; T04B2.5.2; 4K822; CE06351; WBGene00011423; WP:CE06351
T07C12.7 Aff_T07C12.7 P W All gene names: T07C12.7; T07C12.7.1; T07C12.7.2; 5K431; CE06389; WBGene00011571; WP:CE06389 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Wang et al 2003  S4 Climbing, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T08B1.1 Aff_T08B1.1 P W All gene names: T08B1.1; 5C464; CE23957; WBGene00020340; WP:CE23957 WormBase description: sugar transporter
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, herm soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

T08G5.10 Aff_T08G5.10 P W All gene names: met-II; mtl-2; T08G5.10; 5O498; CE25109; NM_074081; WBGene00003474; WP:CE25109 WormBase description: mtl-2 encodes a metallothionein, a small, cysteine-rich, metal-binding protein; MTL-2 functions in metal detoxification and homeostasis and stress adaptation; MTL-2 expression is induced in larval and adult intestinal cells following exposure to cadmium or heat stress; MTL-2 intestinal expression is dependent upon ELT-2, an intestine-specific GATA-type transcription factor.
T08H10.1 Aff_T08H10.1 P W All gene names: T08H10.1; 5E963; CE17230; WBGene00020369; WP:CE17230 WormBase description: aldose reductase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, list of genes in cluster D, Reinke                              
                                              et al 2004, fem3 enriched genes, Reinke et al 2004, IVb                            
                                              male soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

T13F2.1 Aff_T13F2.1 P W All gene names: fat-4; T13F2.1; T13F2.1.1; T13F2.1.2; T13F2.1.3; 4K565; CE25113; NM_069350; WBGene00001396; WP:CE25113 WormBase description: fat-4 encodes a delta-5 fatty acid desaturase; when expressed heterologously in S. cerevisiae, FAT-4 converts di-homo-gamma-linolenic acid (20:3delta8,11,14) to arachidonic acid (20:4delta5,8,11,14), an important precursor in eicosanoid metabolism, as well as on other fatty acids (C18 to C20); FAT-4 is is required in vivo for delta-5 unsaturated fatty acid synthesis. WormBase CDS description: cytochrome B5 containing fusion protein
                                              
Member of lists (Publications lists):
                                              McElwee et al 2003  T1 targets of                                 
                                              daf-16, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

T14G12.3 Aff_T14G12.3 P W All gene names: FIL-1; tag-18; T14G12.3; CE04964; WBGene00006408; WP:CE04964; XE350
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Wang et al 2003  S6 removed genes of                                       
                                              contamination                                                                      

T18H9.2 Aff_T18H9.2 P W All gene names: asp-2; T18H9.2; 5J683; CE33320; CE33321; NM_072983; NM_182329; WBGene00000215; WP:CE33320; WP:CE33321 WormBase description: asp-2 encodes aspartic protease.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T19D12.1 Aff_T19D12.1 P W All gene names: T19D12.1; 2G963; CE28677; WBGene00020576; WP:CE28677 WormBase description: A. faecalis PHB depolymerase; zinc finger protein 40
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T21C12.2 Aff_T21C12.2 P W All gene names: hpd-1; T21C12.2; 3L625; CE02347; NM_066923; WBGene00001993; WP:CE02347 WormBase description: hpd-1 encodes a 4-hydroxyphenylpyruvate dioxygenase that is required for normally short lifespan and negative regulation of the dauer larval stage, with loss of hpd-1 function prolonging lifespan and promoting dauer formation; hpd-1 is a (perhaps evolutionarily conserved) target of transcriptional activation by DAF-16; HPD-1 is orthologous to human HPD (OMIM:276710, mutated in tyrosinemia type III). WormBase CDS description: 4-hydroxyphenylpyruvate dioxygenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class2                               
                                              shorten lifespan, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

T22G5.2 Aff_T22G5.2 P W All gene names: lbp-7; T22G5.2; 5O359; CE13984; NM_074039; WBGene00002259; WP:CE13984 WormBase description: lbp-7 encodes a predicted intracellular fatty acid binding protein (iFABP) that is most similar to the vertebrate muscle and heart FABPs; by homology, LBP-7 is predicted to function as an intracellular transporter for small hydrophobic molecules such as lipids and steroid hormones; as loss of lbp-7 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of LBP-7 in C. elegans development and/or behavior is not yet known. WormBase CDS description: fatty-acid binding protein
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C                               

T25C12.3 Aff_T25C12.3 P W All gene names: T25C12.3; T25C12.3.1; T25C12.3.2; CE18966; WBGene00012018; WP:CE18966; XM108 WormBase description: EGF-repeats
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Wang et al 2003  S4 Early genes, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

VW02B12L.1 Aff_VW02B12L.1 P W All gene names: vha-6; VW02B12L.1; VW02B12L.1.1; VW02B12L.1.2; 2L726; CE18980; NM_064035; WBGene00006915; WP:CE18980 WormBase description: vacuolar ATP synthase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C                               

W01A11.4 Aff_W01A11.4 P W All gene names: lec-10; W01A11.4; 5G968; CE14396; NM_072246; WBGene00002273; WP:CE14396 WormBase description: lec-10 encodes a galectin, a soluble galactose-binding lectin; recombinant lec-10 can bind to sugar in an in vitro assay. WormBase CDS description: galaptin (S-lectin)
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

W04C9.1 Aff_W04C9.1 P W All gene names: haf-4; W04C9.1; 1A969; CE28355; NM_058338; WBGene00001814; WP:CE28355 WormBase description: haf-4 encodes a member of the ABC transporter family. WormBase CDS description: ABC transporter
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

W04E12.8 Aff_Y116F11.ZZ24 P W All gene names: clec-50; W04E12.8; 5U222; CE19003; WBGene00012253; WP:CE19003 WormBase description: Lectin C-type domain short and long forms (2 domains)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

W07B8.5 Aff_W07B8.5 P W All gene names: cpr-5; W07B8.5; 5B612; CE14682; NM_070982; WBGene00000785; WP:CE14682 WormBase description: cpr-5 encodes a cysteine protease. WormBase CDS description: thiol protease
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 differentially                              
                                              expressed gen, Reinke et al 2004, fem1 enriched genes,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, list of genes in cluster C, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S4 genes pass two-wayANOVA P0                                                     

Y105E8B.5 Aff_Y105E8A.K P W All gene names: Y105E8B.5; 1P253; CE24099; WBGene00013690; WP:CE24099 WormBase description: The Y105E8B.
Y16B4A.2 Aff_C05G5.6 P W All gene names: Y16B4A.2; CE21374; WBGene00012445; WP:CE21374; XP382 WormBase description: serine carboxypeptidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C                               

Y17D7B.4 Aff_Y17D7B.4 P W All gene names: Y17D7B.4; 5T244; CE16593; WBGene00012452; WP:CE16593
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

Y22F5A.4 Aff_Y22F5A.4 P W All gene names: lys-1; Y22F5A.4; Y22F5A.4.1; Y22F5A.4.2; 5K759; CE16605; NM_073241; WBGene00003090; WP:CE16605
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

Y22F5A.5 Aff_Y22F5A.5 P W All gene names: lys-2; Y22F5A.5; 5K760; CE16606; NM_073242; WBGene00003091; WP:CE16606 WormBase description: lys-2 is one of ten C. elegans lysozyme genes; as such, lys-2 can be predicted to have a role in lysozymal function including immune function.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

Y24D9A.8 Aff_Y24D9A_29.F P W All gene names: Y24D9A.8; Y24D9A.8a.1; Y24D9A.8a.2; Y24D9A.8a.3; Y24D9A.8b.1; Y24D9A.8b.2; 4F153; CE28974; CE30402; WBGene00021286; WP:CE28974; WP:CE30402 WormBase description: Y24D9A.8 is orthologous to the human gene TRANSALDOLASE 1 (TALDO1; OMIM:602063), which when mutated leads to disease.
Y2H9A.3 Aff_Y2H9.B P W All gene names: col-162; Y2H9.B; Y2H9A.3; 5N923; CE21291; NM_073933; WBGene00000735; WP:CE21291
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T3 20 most abundant                             
                                              Mixed-stage, Reinke et al 2004, list of genes in                                   
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y34D9A.11 Aff_Y34D9A_153.B P W All gene names: spp-23; Y34D9A.11; Y34D9A.G; 1B493; CE21539; WBGene00021335; WP:CE21539 WormBase description: 7TM chemoreceptor, spp family
Y38H6C.1 Aff_Y38H6C.1 P W All gene names: Y38H6C.1; 5U968; CE19095; WBGene00012615; WP:CE19095
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

Y41D4B.16 Aff_Y41D4B_7946.C P W All gene names: Y41D4B.16; 4C327; CE21859; WBGene00021518; WP:CE21859
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

Y43F8C.13 Aff_Y116F11.ZZ9 P W All gene names: Y43F8C.13; 5U164; CE21911; WBGene00012834; WP:CE21911 WormBase description: Inosine-uridine preferring nucleoside hydrolase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              herm enriched gen, Reinke et al 2004, IVb male soma                                
                                              enriched genes                                                                     

Y51H7C.13 Aff_Y51H7C_254.A P W All gene names: Y51H7C.13; 2B752; CE36040; WBGene00021791; WP:CE36040
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

Y57A10A.11 Aff_Y57A10A.I P W All gene names: rol-1; Y57A10A.11; Y57A10A.I; 2M465; CE22614; NM_064188; WBGene00004394; WP:CE22614 WormBase description: rol-1 encodes a nematode cuticular collagen required for normal body morphology at the adult stage of development; rol-1 expression is under the control of the heterochronic pathway, as heterochronic mutants that synthesize adult cuticle early produce animals that roll as larvae, while heterochronic mutants that fail to execute normal adult development never display the roller phenotype.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, ViswanathanM et al 2005  S2 sir-2.1 regulated,                             
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y67D8C.8 Aff_Y67D8A_380.C P W All gene names: Y67D8C.8; 4D834; CE27506; WBGene00022072; WP:CE27506
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, fem3 enriched genes,                             
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              list of genes in cluster C, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

Y67H2A.8 Aff_Y67H2A.B P W All gene names: fat-1; Y67H2A.8; Y67H2A.8.1; Y67H2A.8.2; 4O83; CE22790; WBGene00001393; WP:CE22790 WormBase description: The fat-1 gene encodes an omega-3 fatty acyl desaturase that acts on substrates of 16-20 carbons with a preference for omega-6 fatty acids; FAT-1 dehydrogenates its substrates 3 carbons from the methyl terminus; FAT-1 is required in vivo for n3 polyunsaturated fatty acid (PUFA) synthesis. WormBase CDS description: fatty acid desaturase
Y71H2AL.1 Aff_Y71H2_381.B P W All gene names: Y71H2AL.1; 3D772; CE27032; WBGene00022164; WP:CE27032
ZC204.12 Aff_ZC204.12 P W All gene names: ZC204.12; 2B946; CE15106; WBGene00022562; WP:CE15106
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

ZK131.6 Aff_ZK131.6 P W All gene names: his-12; ZK131.6; 2O112; NM_064490; WBGene00001886 WormBase description: his-12 encodes an H2A histone; his-12 is contained within the histone gene cluster HIS3. WormBase CDS description: histone H2A
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

ZK265.2 Aff_ZK265.2 P W All gene names: col-63; ZK265.2; 1I820; CE15291; NM_059844; WBGene00000639; WP:CE15291 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, herm soma enriched genes,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol