Baugh et al 2003, class M, 5846 genes

Gene list file name:Baugh2003_classM.txt
Type of gene identifier:Affymetrix custom chip
Description:Baugh et al 2005, Supplymental Dataset, class M  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

3R5.1 Aff_3R5.1 P W All gene names: 3R5.1; 3O869; CE24758; WBGene00007065; WP:CE24758
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

6R55.1 Aff_6R55.1 P W All gene names: 6R55.1; CE19652; CE26787; WBGene00007068; WP:CE19652; WP:CE26787; XS331
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

6R55.2 Aff_6R55.2 P W All gene names: 6R55.2; CE19653; WBGene00007069; WP:CE19653; XS325
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

AC3.1 Aff_AC3.1 P W All gene names: sri-20; AC3.1; 5K849; CE39465; NM_073264; WBGene00005532; WP:CE39465 WormBase description: 7TM chemoreceptor, sri family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

AC3.5 Aff_AC3.5 P W All gene names: AC3.5; 5K873; CE36372; WBGene00007071; WP:CE36372 WormBase description: glutamyl aminopeptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination                                                                      

AC7.2 Aff_AC7.2 P W All gene names: soc-2; sur-8; AC7.2; AC7.2a.1; AC7.2a.2; 4F892; CE25736; CE31275; NM_171332; WBGene00004929; WP:CE25736; WP:CE31275
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Wang et al 2003  S4 Early genes,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

AC8.10 Aff_AC8.F P W All gene names: AC8.10; WBGene00043988; XA854
AFF_AC8.A Aff_AC8.A P W
AFF_AC8.J Aff_AC8.J P W
AFF_AH6.9 Aff_AH6.9 P W
AFF_B0280.1 Aff_B0280.1 P W
AFF_B0336.5 Aff_B0336.5 P W
AFF_B0391.1 Aff_B0391.1 P W
AFF_B0413.D Aff_B0413.D P W
AFF_B0513.7 Aff_B0513.7 P W
AFF_B0513.9 Aff_B0513.9 P W
AFF_C01G10.4 Aff_C01G10.4 P W
AFF_C02E7.14 Aff_C02E7.14 P W
AFF_C03B1.6 Aff_C03B1.6 P W
AFF_C04F1.2 Aff_C04F1.2 P W
AFF_C04G6.3 Aff_C04G6.3 P W
AFF_C05B5.5 Aff_C05B5.5 P W
AFF_C05C8.1 Aff_C05C8.1 P W
AFF_C05E4.5 Aff_C05E4.5 P W
AFF_C06A1.4 Aff_C06A1.4 P W
AFF_C06E8.1 Aff_C06E8.1 P W
AFF_C06G1.3 Aff_C06G1.3 P W
AFF_C07D8.4 Aff_C07D8.4 P W
AFF_C09H5.8 Aff_C09H5.8 P W
AFF_C12D12.6 Aff_C12D12.6 P W
AFF_C13A2.7 Aff_C13A2.7 P W
AFF_C14B1.7 Aff_C14B1.7 P W
AFF_C14B9.3 Aff_C14B9.3 P W
AFF_C15C8.4 Aff_C15C8.4 P W
AFF_C16C2.2 Aff_C16C2.2 P W
AFF_C16C4.2 Aff_C16C4.2 P W
AFF_C16E9.5 Aff_C16E9.5 P W
AFF_C17B7.6 Aff_C17B7.6 P W
AFF_C17F4.4 Aff_C17F4.4 P W
AFF_C17F4.5 Aff_C17F4.5 P W
AFF_C23H3.4 Aff_C23H3.4 P W
AFF_C24H11.6 Aff_C24H11.6 P W
AFF_C25A1.6 Aff_C25A1.6 P W
AFF_C25H3.3 Aff_C25H3.3 P W
AFF_C30A5.9 Aff_C30A5.9 P W
AFF_C30G12.5 Aff_C30G12.5 P W
AFF_C33A11.2 Aff_C33A11.2 P W
AFF_C34D4.9 Aff_C34D4.9 P W
AFF_C35D10.1 Aff_C35D10.1 P W
AFF_C36B1.3 Aff_C36B1.3 P W
AFF_C43E11.11 Aff_C43E11.11 P W
AFF_C43E11.4 Aff_C43E11.4 P W
AFF_C45E1.4 Aff_C45E1.4 P W
AFF_C46A5.6 Aff_C46A5.6 P W
AFF_C46F9.1 Aff_C46F9.1 P W
AFF_C47E12.3 Aff_C47E12.3 P W
AFF_C49A1.8 Aff_C49A1.8 P W
AFF_C49A9.8 Aff_C49A9.8 P W
AFF_C50D2.5 Aff_C50D2.5 P W
AFF_C50F2.2 Aff_C50F2.2 P W
AFF_E01A2.I Aff_E01A2.I P W
AFF_F07H5.5 Aff_F07H5.5 P W
AFF_F09E5.4 Aff_F09E5.4 P W
AFF_F10D2.3 Aff_F10D2.3 P W
AFF_F10E9.7 Aff_F10E9.7 P W
AFF_F10G7.10 Aff_F10G7.10 P W
AFF_F14D2.10 Aff_F14D2.10 P W
AFF_F15A4.1 Aff_F15A4.1 P W
AFF_F15D4.3 Aff_F15D4.3 P W
AFF_F20D12.5 Aff_F20D12.5 P W
AFF_F21C10.2 Aff_F21C10.2 P W
AFF_F21H12.1 Aff_F21H12.1 P W
AFF_F22B3.6 Aff_F22B3.6 P W
AFF_F22D6.13 Aff_F22D6.13 P W
AFF_F22E5.15 Aff_F22E5.15 P W
AFF_F23A7.6 Aff_F23A7.6 P W
AFF_F23C8.C Aff_F23C8.C P W
AFF_F23C8.I Aff_F23C8.I P W
AFF_F23F12.2 Aff_F23F12.2 P W
AFF_F23H12.1 Aff_F23H12.1 P W
AFF_F26A1.5 Aff_F26A1.5 P W
AFF_F26D11.3 Aff_F26D11.3 P W
AFF_F26F4.2 Aff_F26F4.2 P W
AFF_F26F4.8 Aff_F26F4.8 P W
AFF_F27C1.6 Aff_F27C1.6 P W
AFF_F28B3.6 Aff_F28B3.6 P W
AFF_F28C12.3 Aff_F28C12.3 P W
AFF_F30A10.7 Aff_F30A10.7 P W
AFF_F31E3.6 Aff_F31E3.6 P W
AFF_F32A5.7 Aff_F32A5.7 P W
AFF_F35E8.5 Aff_F35E8.5 P W
AFF_F35H12.2 Aff_F35H12.2 P W
AFF_F36H2.2 Aff_F36H2.2 P W
AFF_F36H5.7 Aff_F36H5.7 P W
AFF_F37B4.8 Aff_F37B4.8 P W
AFF_F39E9.3 Aff_F39E9.3 P W
AFF_F39F10.1 Aff_F39F10.1 P W
AFF_F43C11_37.B Aff_F43C11_37.B P W
AFF_F43G6.6 Aff_F43G6.6 P W
AFF_F44A2.6 Aff_F44A2.6 P W
AFF_F44B9.8 Aff_F44B9.8 P W
AFF_F44F1.1 Aff_F44F1.1 P W
AFF_F45D11_39.C Aff_F45D11_39.C P W
AFF_F45E6.5 Aff_F45E6.5 P W
AFF_F46B6.3 Aff_F46B6.3 P W
AFF_F46F11.8 Aff_F46F11.8 P W
AFF_F48A11.6 Aff_F48A11.6 P W
AFF_F49E8.2 Aff_F49E8.2 P W
AFF_F49H12.D Aff_F49H12.D P W
AFF_F52C12.2 Aff_F52C12.2 P W
AFF_F52G2.2 Aff_F52G2.2 P W
AFF_F53C3.9 Aff_F53C3.9 P W
AFF_F53F10.3 Aff_F53F10.3 P W
AFF_F55A11.4 Aff_F55A11.4 P W
AFF_F55F1.1 Aff_F55F1.1 P W
AFF_F56A11.1 Aff_F56A11.1 P W
AFF_F57C9.3 Aff_F57C9.3 P W
AFF_F58E10.1 Aff_F58E10.1 P W
AFF_F59A1.7 Aff_F59A1.7 P W
AFF_F59E12.3 Aff_F59E12.3 P W
AFF_F59E12.7 Aff_F59E12.7 P W
AFF_H10D18.D Aff_H10D18.D P W
AFF_H12D21.5 Aff_H12D21.5 P W
AFF_H14E04.B Aff_H14E04.B P W
AFF_H24K24.C Aff_H24K24.C P W
AFF_K02B12.5 Aff_K02B12.5 P W
AFF_K06B9.4 Aff_K06B9.4 P W
AFF_K07E3.6 Aff_K07E3.6 P W
AFF_K07F5.12 Aff_K07F5.12 P W
AFF_K07F5.14 Aff_K07F5.14 P W
AFF_K10C9.2 Aff_K10C9.2 P W
AFF_K11D12.7 Aff_K11D12.7 P W
AFF_K12D9.2 Aff_K12D9.2 P W
AFF_M03A1.5 Aff_M03A1.5 P W
AFF_M04F3.3 Aff_M04F3.3 P W
AFF_M116.2 Aff_M116.2 P W
AFF_R02F2.2 Aff_R02F2.2 P W
AFF_R05H11.1 Aff_R05H11.1 P W
AFF_R06A4.3 Aff_R06A4.3 P W
AFF_R07E5.12 Aff_R07E5.12 P W
AFF_R07G3.4 Aff_R07G3.4 P W
AFF_R11D1.9 Aff_R11D1.9 P W
AFF_R11G1.2 Aff_R11G1.2 P W
AFF_R13H4.2 Aff_R13H4.2 P W
AFF_R144.3 Aff_R144.3 P W
AFF_T01B7.1 Aff_T01B7.1 P W
AFF_T01G9.2 Aff_T01G9.2 P W
AFF_T01H10.4 Aff_T01H10.4 P W
AFF_T02D1.1 Aff_T02D1.1 P W
AFF_T04G9.3 Aff_T04G9.3 P W
AFF_T05A1.4 Aff_T05A1.4 P W
AFF_T05G5.9 Aff_T05G5.9 P W
AFF_T05H4.8 Aff_T05H4.8 P W
AFF_T05H4.9 Aff_T05H4.9 P W
AFF_T06C10.5 Aff_T06C10.5 P W
AFF_T07C12.2 Aff_T07C12.2 P W
AFF_T08A9.7 Aff_T08A9.7 P W
AFF_T08B2.9 Aff_T08B2.9 P W
AFF_T08D2.G Aff_T08D2.G P W
AFF_T10B10.2 Aff_T10B10.2 P W
AFF_T11G6.8 Aff_T11G6.8 P W
AFF_T12A2.1 Aff_T12A2.1 P W
AFF_T13C5.2 Aff_T13C5.2 P W
AFF_T13C5.6 Aff_T13C5.6 P W
AFF_T24D8.2 Aff_T24D8.2 P W
AFF_T27C5.9 Aff_T27C5.9 P W
AFF_T27E9.7 Aff_T27E9.7 P W
AFF_T28F3.7 Aff_T28F3.7 P W
AFF_W03G1.6 Aff_W03G1.6 P W
AFF_W03G1.9 Aff_W03G1.9 P W
AFF_W07A8.3 Aff_W07A8.3 P W
AFF_W09G3.4 Aff_W09G3.4 P W
AFF_W10G11.19 Aff_W10G11.19 P W
AFF_Y105E8A.H Aff_Y105E8A.H P W
AFF_Y105E8A.J Aff_Y105E8A.J P W
AFF_Y105E8A.L Aff_Y105E8A.L P W
AFF_Y105E8A.R Aff_Y105E8A.R P W
AFF_Y111B2A.P Aff_Y111B2A.P P W
AFF_Y113G7A.I Aff_Y113G7A.I P W
AFF_Y116A8A.LL Aff_Y116A8A.LL P W
AFF_Y116F11.AA Aff_Y116F11.AA P W
AFF_Y116F11.GG Aff_Y116F11.GG P W
AFF_Y13C8_223.D Aff_Y13C8_223.D P W
AFF_Y25C1A.A Aff_Y25C1A.A P W
AFF_Y32F6A.1 Aff_Y32F6A.1 P W
AFF_Y34D9A_150.D Aff_Y34D9A_150.D P W
AFF_Y37D8A.19 Aff_Y37D8A.19 P W
AFF_Y37D8A.21 Aff_Y37D8A.21 P W
AFF_Y37E11A_93.B Aff_Y37E11A_93.B P W
AFF_Y38A10A.B Aff_Y38A10A.B P W
AFF_Y38A10A.C Aff_Y38A10A.C P W
AFF_Y38F2A_6126.E Aff_Y38F2A_6126.E P W
AFF_Y39A1A.17 Aff_Y39A1A.17 P W
AFF_Y39A1A.21 Aff_Y39A1A.21 P W
AFF_Y39A1A.8 Aff_Y39A1A.8 P W
AFF_Y39A3C_82.A Aff_Y39A3C_82.A P W
AFF_Y39A3C_82.B Aff_Y39A3C_82.B P W
AFF_Y39B6.R Aff_Y39B6.R P W
AFF_Y39C12.B Aff_Y39C12.B P W
AFF_Y39G10A_246.F Aff_Y39G10A_246.F P W
AFF_Y39G10A_246.I Aff_Y39G10A_246.I P W
AFF_Y40H7.D Aff_Y40H7.D P W
AFF_Y41D4A_2491.A Aff_Y41D4A_2491.A P W
AFF_Y41D4A_3457.B Aff_Y41D4A_3457.B P W
AFF_Y41D4B_3805.C Aff_Y41D4B_3805.C P W
AFF_Y43F4A.2 Aff_Y43F4A.2 P W
AFF_Y43F4B.7 Aff_Y43F4B.7 P W
AFF_Y46B2_176.B Aff_Y46B2_176.B P W
AFF_Y46C8_100.A Aff_Y46C8_100.A P W
AFF_Y46H3C_14.F Aff_Y46H3C_14.F P W
AFF_Y47D3A.GG Aff_Y47D3A.GG P W
AFF_Y47G6A_240.D Aff_Y47G6A_240.D P W
AFF_Y47G6A_243.B Aff_Y47G6A_243.B P W
AFF_Y48G1A_53.D Aff_Y48G1A_53.D P W
AFF_Y48G1B_55.A Aff_Y48G1B_55.A P W
AFF_Y48G1C_55.C Aff_Y48G1C_55.C P W
AFF_Y49E10.G Aff_Y49E10.G P W
AFF_Y49F6B_110.C Aff_Y49F6B_110.C P W
AFF_Y4C6A.D Aff_Y4C6A.D P W
AFF_Y4C6A.J Aff_Y4C6A.J P W
AFF_Y50D4A_21.B Aff_Y50D4A_21.B P W
AFF_Y50E8A.L Aff_Y50E8A.L P W
AFF_Y51H7B_5.A Aff_Y51H7B_5.A P W
AFF_Y53C10A.F Aff_Y53C10A.F P W
AFF_Y53F4B.H Aff_Y53F4B.H P W
AFF_Y53F4B.S Aff_Y53F4B.S P W
AFF_Y53G8A_2706.A Aff_Y53G8A_2706.A P W
AFF_Y53G8A_2706.C Aff_Y53G8A_2706.C P W
AFF_Y53G8A_9248.A Aff_Y53G8A_9248.A P W
AFF_Y53G8B_93.B Aff_Y53G8B_93.B P W
AFF_Y53G8B_93.E Aff_Y53G8B_93.E P W
AFF_Y54E10A_156.D Aff_Y54E10A_156.D P W
AFF_Y54E10A_159.C Aff_Y54E10A_159.C P W
AFF_Y54G9A.2 Aff_Y54G9A.2 P W
AFF_Y55B1A_115.D Aff_Y55B1A_115.D P W
AFF_Y55B1B_119.E Aff_Y55B1B_119.E P W
AFF_Y55F3A_746.A Aff_Y55F3A_746.A P W
AFF_Y55F3A_746.B Aff_Y55F3A_746.B P W
AFF_Y55F3A_746.D Aff_Y55F3A_746.D P W
AFF_Y57E12_242.A Aff_Y57E12_242.A P W
AFF_Y59A8A.D Aff_Y59A8A.D P W
AFF_Y59A8A.H Aff_Y59A8A.H P W
AFF_Y59A8A.K Aff_Y59A8A.K P W
AFF_Y59A8A.L Aff_Y59A8A.L P W
AFF_Y59A8A.U Aff_Y59A8A.U P W
AFF_Y59E9_118.B Aff_Y59E9_118.B P W
AFF_Y59E9_120.D Aff_Y59E9_120.D P W
AFF_Y61A9LA_74.B Aff_Y61A9LA_74.B P W
AFF_Y61A9LA_74.E Aff_Y61A9LA_74.E P W
AFF_Y63D3A.1 Aff_Y63D3A.1 P W
AFF_Y67D8A_375.B Aff_Y67D8A_375.B P W
AFF_Y67D8A_384.A Aff_Y67D8A_384.A P W
AFF_Y71A12B.C Aff_Y71A12B.C P W
AFF_Y71F9A_294.B Aff_Y71F9A_294.B P W
AFF_Y71F9B_287.A Aff_Y71F9B_287.A P W
AFF_Y71G10A_85.A Aff_Y71G10A_85.A P W
AFF_Y71G12A_201.A Aff_Y71G12A_201.A P W
AFF_Y71H2_381.A Aff_Y71H2_381.A P W
AFF_Y71H2_389.E Aff_Y71H2_389.E P W
AFF_Y73C8B.C Aff_Y73C8B.C P W
AFF_Y73F8A.AA Aff_Y73F8A.AA P W
AFF_Y73F8A.X Aff_Y73F8A.X P W
AFF_Y75B8A.U Aff_Y75B8A.U P W
AFF_Y75D11A_90.C Aff_Y75D11A_90.C P W
AFF_Y76B12C_67.C Aff_Y76B12C_67.C P W
AFF_Y77E11A_3443.D Aff_Y77E11A_3443.D P W
AFF_Y77E11A_3443.Q Aff_Y77E11A_3443.Q P W
AFF_Y81G3A.A Aff_Y81G3A.A P W
AFF_Y94H6A_148.L Aff_Y94H6A_148.L P W
AFF_Y95B8A_85.C Aff_Y95B8A_85.C P W
AFF_ZC395.7 Aff_ZC395.7 P W
AFF_ZC449.3 Aff_ZC449.3 P W
AFF_ZK105_3.G Aff_ZK105_3.G P W
AFF_ZK1127.11 Aff_ZK1127.11 P W
AFF_ZK1128.1 Aff_ZK1128.1 P W
AFF_ZK1236.5 Aff_ZK1236.5 P W
AFF_ZK402.4 Aff_ZK402.4 P W
AFF_ZK546.13 Aff_ZK546.13 P W
AFF_ZK688.5 Aff_ZK688.5 P W
AFF_ZK688.7 Aff_ZK688.7 P W
AFF_ZK783.4 Aff_ZK783.4 P W
AFF_ZK84.4 Aff_ZK84.4 P W
AFF_ZK970.2 Aff_ZK970.2 P W
AFF_ZK973_14.M Aff_ZK973_14.M P W
AH10.2 Aff_AH10.2 P W All gene names: AH10.2; 5O637; CE07656; WBGene00007083; WP:CE07656
AH10.3 Aff_AH10.3 P W All gene names: AH10.3; 5O622; CE07657; WBGene00007084; WP:CE07657
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

AH10.4 Aff_AH10.4 P W All gene names: AH10.4; 5O616; CE07658; WBGene00007085; WP:CE07658
AH6.1 Aff_AH6.1 P W All gene names: gcy-1; AH6.1; 2J800; CE01450; NM_063638; WBGene00001528; WP:CE01450 WormBase description: gcy-1 is predicted to encode a guanylate cyclase; however, transcriptional fusions of the putative upstream regulatory region with a GFP reporter did not confirm its expression. WormBase CDS description: guanylate cyclase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

AH6.10 Aff_AH6.10 P W All gene names: sra-6; AH6.10; 2J836; CE01451; NM_063651; WBGene00005032; WP:CE01451 WormBase description: 7TM chemoreceptor, sra family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

AH6.11 Aff_AH6.11 P W All gene names: sra-7; AH6.11; 2J833; CE01452; NM_063649; WBGene00005033; WP:CE01452 WormBase description: 7TM chemoreceptor, sra family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

AH6.12 Aff_AH6.12 P W All gene names: sra-8; AH6.12; 2J827; CE01453; NM_063646; WBGene00005034; WP:CE01453 WormBase description: 7TM chemoreceptor, sra family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

AH6.5 Aff_AH6.5 P W All gene names: mex-6; AH6.5; 2J815; CE26846; NM_063642; WBGene00003231; WP:CE26846 WormBase description: mex-6 encodes a CCCH zinc-finger protein highly similar to MEX-5 that functions with MEX-5 to affect embryonic viability, establish soma germline asymmetry in embryos and establish PIE-1, MEX-1, and POS-1 asymmetry in embryos, and also affects formation of intestinal cells; MEX-6 and MEX-5 may act downstream of the PAR proteins. WormBase CDS description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

AH6.8 Aff_AH6.8 P W All gene names: sra-4; AH6.8; 2J830; CE01462; NM_063648; WBGene00005030; WP:CE01462 WormBase description: 7TM chemoreceptor, sra family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

B0001.1 Aff_B0001.1 P W All gene names: B0001.1; 4M899; CE32786; WBGene00007086; WP:CE32786
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

B0001.2 Aff_B0001.2 P W All gene names: B0001.2; 4M912; CE36776; WBGene00007087; WP:CE36776
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, list of genes in                            
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, herm soma                              
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

B0001.3 Aff_B0001.3 P W All gene names: B0001.3; 4M908; CE29523; WBGene00007088; WP:CE29523
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

B0001.4 Aff_B0001.4 P W All gene names: B0001.4; 4M900; CE37307; WBGene00007089; WP:CE37307 WormBase description: uridine kinase like
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0001.6 Aff_B0001.6 P W All gene names: B0001.6; B0001.6.1; B0001.6.2; B0001.6.3; 4M927; CE31863; WBGene00007091; WP:CE31863
B0001.7 Aff_B0001.7 P W All gene names: B0001.7; 4M916; CE05145; WBGene00007092; WP:CE05145
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

B0001.8 Aff_B0001.5 P W All gene names: B0001.8; B0001.8.1; B0001.8.2; B0001.8.3; 4M904; CE31864; WBGene00007093; WP:CE31864
B0024.10 Aff_B0024.10 P W All gene names: B0024.10; B0024.10.1; B0024.10.2; 5K796; CE05154; WBGene00007100; WP:CE05154
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0024.11 Aff_B0024.11 P W All gene names: B0024.11; 5K798; CE05155; WBGene00007101; WP:CE05155 WormBase description: Uncharacterized protein family UPF0024
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

B0024.12 Aff_B0024.12 P W All gene names: gna-1; B0024.12; 5K800; CE05156; CeGNA1; NM_073253; WBGene00001646; WP:CE05156 WormBase description: gna-1 encodes one of two C. elegans glucosamine 6-phosphate N-acetyltransferases (GNAs); by homology, GNA-1 is predicted to be required for the formation of UDP-N-acetylglucosamine, a substrate in chitin synthesis, Golgi and cytoplasmic glycosylation, and GPI anchoring; as loss of gna-1 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of GNA-1 in C. elegans development and/or behavior is not yet known. WormBase CDS description: Acetyltransferase (GNAT) family
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Wang et al 2003  S4 Climbing, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA, Wang et al 2003  S4                                 
                                              genes pass two-wayANOVA P0                                                         

B0024.13 Aff_B0024.13 P W All gene names: B0024.13; 5K803; CE05157; CE35376; WBGene00007102; WP:CE05157; WP:CE35376
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, list                            
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

B0024.15 Aff_B0024.3 P W All gene names: B0024.15; 5K771; CE31280; WBGene00007104; WP:CE31280
B0024.2 Aff_B0024.2 P W All gene names: col-150; B0024.2; 5K774; CE05147; NM_073246; WBGene00000723; WP:CE05147 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0024.9 Aff_B0024.9 P W All gene names: B0024.9; B0024.9.1; B0024.9.2; 5K795; CE05153; WBGene00007099; WP:CE05153 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: thioredoxin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

B0025.1 Aff_B0025.1 P W All gene names: let-512; vps-34; B0025.1; B0025.1b.1; B0025.1b.2; B0025.1c.1; B0025.1c.2; B0025.1d.1; B0025.1d.2; 1G609; CE24759; CE24760; CE37691; CE37738; CE37739; NM_059340; WBGene00006932; WP:CE24759; WP:CE24760; WP:CE37691; WP:CE37738; WP:CE37739 WormBase description: The vps-34 gene encodes an ortholog of the phosphoinositide 3-kinase VPS34 in S. cerevisiae, a protein that regulates multiple steps in endocytosis, and that is required for growth at normal rates during development.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0025.2 Aff_B0025.3 P W All gene names: csn-2; B0025.2; B0025.2.1; B0025.2.2; B0025.2.3; 1G601; CE27562; NM_059339; WBGene00000814; WP:CE27562 WormBase description: csn-2 encodes a homolog of COP9 signalosome complex subunit 2 that affects embryonic viability and growth rate.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, Fig2b shared                              
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster D, ViswanathanM et al 2005  S2 daf-16                             
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

B0025.4 Aff_B0025.2 P W All gene names: B0025.4; 1G605; CE30120; WBGene00015001; WP:CE30120
B0034.1 Aff_B0034.1 P W All gene names: B0034.1; 2G261; CE39883; WBGene00015002; WP:CE39883
B0034.2 Aff_B0034.2 P W All gene names: B0034.2; 2G232; CE02410; WBGene00015003; WP:CE02410
B0035.1 Aff_B0035.1 P W All gene names: B0035.1; 4M77; CE05159; CE07665; WBGene00007105; WP:CE05159; WP:CE07665 WormBase description: Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

B0035.11 Aff_B0035.11 P W All gene names: B0035.11; 4M94; CE05166; WBGene00007110; WP:CE05166 WormBase description: Yeast LEO1 protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

B0035.12 Aff_B0035.12 P W All gene names: B0035.12; B0035.12.1; B0035.12.2; 4M96; CE05167; WBGene00007111; WP:CE05167 WormBase description: polyadenylate-binding protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

B0035.13 Aff_B0035.13 P W All gene names: B0035.13; 4M70; CE05168; WBGene00007112; WP:CE05168 WormBase description: lipase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0035.14 Aff_B0035.14 P W All gene names: dnj-1; B0035.14; 4M69; CE05169; NM_069721; WBGene00001019; WP:CE05169 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain. WormBase CDS description: DNAJ protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

B0035.15 Aff_B0035.15 P W All gene names: B0035.15; 4M62; CE05170; WBGene00007113; WP:CE05170
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

B0035.16 Aff_B0035.16 P W All gene names: B0035.16; 4M60; CE26926; WBGene00007114; WP:CE26926 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: Haemophilus hypothetical protein HI1074 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0035.2 Aff_B0035.2 P W All gene names: dnj-2; B0035.2; 4M78; CE05160; NM_069725; WBGene00001020; WP:CE05160 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain. WormBase CDS description: DNAJ protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

B0035.3 Aff_B0035.3 P W All gene names: B0035.3; 4M80; CE05161; WBGene00007106; WP:CE05161 WormBase description: viral non-structural protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

B0035.4 Aff_B0035.4 P W All gene names: tag-317; B0035.4; B0035.4.1; B0035.4.2; B0035.4.3; 4M79; 4M81; CE05162; WBGene00007107; WP:CE05162 WormBase description: paramyosin like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0035.5 Aff_B0035.5 P W All gene names: B0035.5; B0035.5.1; B0035.5.2; 4M83; CE05163; WBGene00007108; WP:CE05163 WormBase description: B0035.5 is orthologous to the human gene GLUCOSE-6-PHOSPHATE DEHYDROGENASE (G6PD; OMIM:305900), which when mutated leads to disease. WormBase CDS description: glucose-6-phosphate-1-dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen                                                                                

B0035.6 Aff_B0035.6 P W All gene names: B0035.6; 4M87; CE20443; WBGene00007109; WP:CE20443
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

B0035.7 Aff_F54E12.5 P W All gene names: his-47; B0035.7; 4M88; NM_069730; WBGene00001921; his 12 WormBase description: his-47 encodes an H2A histone; by homology, HIS-47 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-47 is a replication-dependent histone locus that resides in a histone gene-rich region on chromosome IV. WormBase CDS description: histone H2A
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

B0035.9 Aff_F54E12.3 P W All gene names: his-46; B0035.9; 4M90; NM_069732; WBGene00001920 WormBase description: his-46 encodes an H4 histone. WormBase CDS description: histone H4
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0041.2 Aff_B0041.2 P W All gene names: B0041.2; B0041.2a.1; B0041.2a.2; 1F227; CE27563; CE29526; CE33546; WBGene00015007; WP:CE27563; WP:CE29526; WP:CE33546
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0041.3 Aff_B0041.3 P W All gene names: B0041.3; 1F213; CE07668; WBGene00015008; WP:CE07668
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0041.4 Aff_B0041.4 P W All gene names: rpl-4; B0041.4; B0041.4.1; B0041.4.2; B0041.4.3; 1F214; CE07669; NM_059015; WBGene00004415; WP:CE07669 WormBase description: rpl-4 encodes a large ribosomal subunit L4 protein. WormBase CDS description: ribosomal protein L1
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

B0041.5 Aff_B0041.5 P W All gene names: B0041.5; 1F218; CE29527; WBGene00015009; WP:CE29527
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0041.6 Aff_B0041.6 P W All gene names: ptps-1; B0041.6; 1F220; CE34237; CE39541; WBGene00015010; WP:CE34237; WP:CE39541 WormBase description: B0041.6 is orthologous to the human gene 6-PYRUVOYLTETRAHYDROPTERIN SYNTHASE (PTS; OMIM:261640), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

B0041.7 Aff_B0041.7 P W All gene names: slr-8; xnp-1; B0041.7; 1F234; CE17314; NM_059022; WBGene00006961; WP:CE17314 WormBase description: xnp-1 encodes an ATP-dependent DNA helicase of the SNF2 family that is orthologous to human XNP/ATR-X, which is associated with a number of X-linked mental retardation syndromes; in C. elegans, xnp-1 activity is required at high temperatures for embryogenesis, somatic gonad development, fertility, and vulval morphogenesis; in addition, animals doubly mutant for xnp-1 and lin-35/Rb, hpl-2/HP1, or nucleosome remodelling and histone deacetylase (NuRD) complex members such as lin-53 and let-418, display larval arrest with growth cessation but continued cell proliferation; xnp-1 is also required, with lin-35/Rb and hpl-2/HP1, for proper regulation of transgene expression; xnp-1 mRNA, detectable in embryos and the germline by in situ hybridization, is expressed at highest levels in embryos with decreasing levels seen in successive larval stages; xnp-1 transcriptional reporter fusions exhibit strong expression beginning at mid-embryogenesis but fading by embryonic morphogenesis; at hatching, expression is observed in all dividing cells including the P lineage, and at later larval stages expression is observed in the vulval precursor cells. WormBase CDS description: helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

B0047.3 Aff_B0047.3 P W All gene names: bath-24; B0047.3; 2C330; CE07675; WBGene00015014; WP:CE07675
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

B0198.1 Aff_B0198.1 P W All gene names: tsp-20; B0198.1; CE26461; NM_077613; WBGene00006646; WP:CE26461; XM652 WormBase description: tetraspanin
B0205.1 Aff_B0205.1 P W All gene names: B0205.1; 1L292; CE34238; CE36908; WBGene00015017; WP:CE34238; WP:CE36908
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Romagnolo et al 2002                               
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0205.3 Aff_B0205.3 P W All gene names: mcb-1; rpn-10; B0205.3; B0205.3.1; B0205.3.2; 1L308; CE26355; NM_060408; WBGene00004466; WP:CE26355 WormBase description: rpn-10 encodes a protein that contains two ubiquitin interaction motifs and is a member of the von Willebrand factor, type A superfamily similar to the mouse 26S proteasome non-ATP regulatory subunit 4.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes                                                   

B0205.5 Aff_B0205.5 P W All gene names: B0205.5; 1L317; CE39543; WBGene00015020; WP:CE39543
B0205.6 Aff_B0205.6 P W All gene names: B0205.6; 1L315; CE30405; WBGene00015021; WP:CE30405 WormBase description: aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0205.7 Aff_B0205.7 P W All gene names: kin-3; B0205.7; B0205.7.1; B0205.7.2; 1L311; CE17321; NM_060410; WBGene00002191; WP:CE17321 WormBase description: kin-3 encodes an ortholog of the catalytic subunit of casein kinase II alpha, which in Drosophila and mammals is required for normal circadian rhythms, and which directly phosphorylates the Drosophila PERIOD protein (which itself regulates circadian rhythms); by analogy, KIN-3 might be expected to help regulate heterochronic functions dependent on such proteins as LIN-42. WormBase CDS description: casein kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

B0205.8 Aff_B0205.8 P W All gene names: B0205.8; 1L306; CE17322; WBGene00015022; WP:CE17322
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0205.9 Aff_B0205.9 P W All gene names: B0205.9; 1L299; CE17323; WBGene00015023; WP:CE17323
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

B0207.4 Aff_B0207.4 P W All gene names: air-2; cyk-6; let-603; stu-7; B0207.4; 1G515; CE24761; NM_059313; WBGene00000099; WP:CE24761 WormBase description: air-2 encodes an aurora/Ip11-related serine/threonine protein kinase that affects embryonic viability and chromosome segregation during meiosis and mitosis and is required for cytokinesis; AIR-2 has two functions during mitosis, one in chromosome segregation, and a second, independent function in cytokinesis through ZEN-4; AIR-2 and ZEN-4 may act in parallel to a second pathway that includes CYK-1; AIR-2 phosphorylates two adjacent, evolutionarily conserved C-terminal serines of the inner centromere protein ICP-1; AIR-2 forms a robust complex with CSC-1, BIR-1, and ICP-1; air-2 is expressed highly in embryos, in the mature oocytes, spermatocytes, and extruded polar bodies. WormBase CDS description: protein kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0207.6 Aff_B0207.6 P W All gene names: B0207.6; 1G512; CE30229; WBGene00015029; WP:CE30229
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

B0207.9 Aff_B0207.9 P W All gene names: B0207.9; 1G532; CE07687; WBGene00015032; WP:CE07687
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, fem3                                   
                                              enriched genes                                                                     

B0212.1 Aff_B0212.1 P W All gene names: B0212.1; 4E341; CE16767; WBGene00015035; WP:CE16767
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Wang et al 2003  S4 Climbing,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

B0212.3 Aff_B0212.3 P W All gene names: B0212.3; 4E307; CE16769; WBGene00015037; WP:CE16769
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

B0213.3 Aff_B0213.3 P W All gene names: nlp-28; B0213.3; 5E463; CE16774; NM_071709; WBGene00003766; WP:CE16774
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination                                                                      

B0213.9 Aff_B0213.9 P W All gene names: str-247; B0213.9; 5E429; CE38135; NM_071697; WBGene00006274; WP:CE38135 WormBase description: 7TM chemoreceptor, str family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

B0218.1 Aff_B0218.1 P W All gene names: B0218.1; B0218.1a.1; B0218.1a.2; B0218.1a.3; B0218.1a.4; B0218.1a.5; B0218.1b.1; B0218.1b.2; B0218.1b.3; 4I925; CE06684; CE33351; WBGene00015047; WP:CE06684; WP:CE33351 WormBase description: amidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0218.2 Aff_B0218.2 P W All gene names: B0218.2; B0218.2.1; B0218.2.2; 4I919; CE06685; WBGene00015048; WP:CE06685 WormBase description: amidase
B0218.8 Aff_B0218.8 P W All gene names: clec-52; B0218.8; 4I932; CE06691; WBGene00015052; WP:CE06691 WormBase description: 7TM chemoreceptor, clec family
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ReichertK et al 2005  T2 xenobiotic                             
                                              induced C-type, Reinke et al 2004, herm soma enriched                              
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

B0228.7 Aff_B0228.7 P W All gene names: B0228.7; 2I48; CE34630; WBGene00015064; WP:CE34630
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

B0238.10 Aff_B0238.10 P W All gene names: B0238.10; 5F753; CE07700; WBGene00015074; WP:CE07700 WormBase description: acyltransfersase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster E                               

B0238.11 Aff_B0238.11 P W All gene names: B0238.11; B0238.11.1; B0238.11.2; 5F747; CE07701; WBGene00015075; WP:CE07701
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0238.12 Aff_B0238.12 P W All gene names: B0238.12; 5F745; CE07702; WBGene00015076; WP:CE07702
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

B0240.4 Aff_B0240.2 P W All gene names: B0240.4; B0240.4.1; B0240.4.2; 5M212; CE31866; WBGene00007118; WP:CE31866
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Wang et al                               
                                              2003  S5 genes common to feeding ANOVA, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA                                                      

B0244.10 Aff_B0244.7 P W All gene names: B0244.10; 3G825; CE26788; WBGene00015085; WP:CE26788
B0244.8 Aff_B0244.8 P W All gene names: egg-1; B0244.8; 3G819; CE32094; WBGene00015083; WP:CE32094 WormBase description: LDL receptor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S6                                 
                                              removed genes of contamination                                                     

B0250.1 Aff_B0250.1 P W All gene names: rpl-2; B0250.1; B0250.1.1; B0250.1.2; 5U949; CE18478; NM_075539; WBGene00004413; WP:CE18478 WormBase description: rpl-2 encodes a large ribosomal subunit L8 protein. WormBase CDS description: Ribosomal Proteins L2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

B0250.5 Aff_B0250.5 P W All gene names: B0250.5; 5U965; CE18481; WBGene00007122; WP:CE18481 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: 3-HYDROXYISOBUTYRATE DEHYDROGENASE PRECURSOR (EC 1.1.1.31) (HIBADH) (FRAGMENT)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

B0252.3 Aff_B0252.3 P W All gene names: B0252.3; B0252.3c.1; B0252.3c.2; 2H194; CE30586; CE32095; CE34631; WBGene00015088; WP:CE30586; WP:CE32095; WP:CE34631
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0252.4 Aff_B0252.4 P W All gene names: cyn-10; cyp-10; B0252.4; 2H202; CE02420; CE27567; NM_063015; WBGene00000886; WP:CE02420; WP:CE27567 WormBase description: cyp-10 encodes a divergent cyclophilin isoform that is functional when expressed in E. coli.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0261.1 Aff_B0261.1 P W All gene names: B0261.1; B0261.1.1; B0261.1.2; 1F835; CE29531; WBGene00015091; WP:CE29531
B0261.2 Aff_B0261.2 P W All gene names: CE-TOR; let-363; B0261.2; 1F831; CE32559; CE32560; CeTor; NM_059148; NM_059151; WBGene00002583; WP:CE32559; WP:CE32560 WormBase description: let-363 encodes, by alternative splicing, two large (>2600-residue) proteins with C-terminal similarity to phosphatidylinositol kinase (PIK); LET-363 proteins are orthologous to S. cerevisiae Tor1p and Tor2p and human FRAP1 (OMIM:601231, mammalian target of FKBP12-rapamycin); LET-363 proteins are required for progression through the L3 stage of larval development and are thought to generally stimulate translation of most or all mRNAs ('global translation'); LET-363 activity is also necessary for normal development and physiology of the intestine; LET-363 proteins are expressed ubiquitously, including a maternal contribution to the early embryo.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

B0261.4 Aff_B0261.4 P W All gene names: B0261.4; 1F813; CE39547; CE39548; WBGene00015092; WP:CE39547; WP:CE39548
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

B0261.7 Aff_B0261.7 P W All gene names: B0261.7; 1F838; CE07709; WBGene00015095; WP:CE07709
B0272.2 Aff_B0272.2 P W All gene names: B0272.2; CE00851; WBGene00007128; WP:CE00851; XK58
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0272.3 Aff_B0272.3 P W All gene names: B0272.3; CE00852; WBGene00007129; WP:CE00852; XK51 WormBase description: 3-hydroxyacyl-CoA dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Metabolism,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

B0273.1 Aff_B0273.1 P W All gene names: B0273.1; 4G259; CE16787; WBGene00015097; WP:CE16787
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0273.2 Aff_B0273.2 P W All gene names: puf-7; B0273.2; B0273.2.1; B0273.2.2; 4G253; CE16788; NM_068419; WBGene00004243; WP:CE16788 WormBase description: puf-7 encodes a protein 97% identical to PUF-6 and functions redundantly with the other PUF genes, fbf-1, fbf-2, puf-6, and puf-8, during primordial germ cell development, based on combinatorial RNAi; interacts with NOS-2 in yeast two-hybrid screens.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0273.3 Aff_B0273.3 P W All gene names: B0273.3; 4G250; CE16789; WBGene00015098; WP:CE16789
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched                                                              

B0280.10 Aff_B0280.10 P W All gene names: B0280.10; 3I222; CE29533; WBGene00015105; WP:CE29533
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0280.3 Aff_B0280.3 P W All gene names: B0280.3; B0280.3.1; B0280.3.2; 3I213; CE00733; WBGene00015101; WP:CE00733
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

B0280.5 Aff_B0280.5 P W All gene names: B0280.5; 3I192; CE31868; WBGene00015102; WP:CE31868 WormBase description: B0280.5 encodes a protein with a chitin binding peritrophin-A domain that is required, in conjunction with CEJ-1, for early embryonic development; B0280.5 mRNA is expressed specifically in the adult hermaphrodite germ line, is a direct target of GLD-1, and has an RNAi phenotype consistent with the hypothesis that B0280.5 is an effector of GLD-1 in the germline.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, IVb male                                
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination                                                                      

B0280.7 Aff_B0280.7 P W All gene names: B0280.7; 3I200; CE29535; WBGene00015103; WP:CE29535
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0280.8 Aff_B0280.8 P W All gene names: nhr-10; B0280.8; 3I202; CE00815; NM_066153; WBGene00003609; WP:CE00815 WormBase description: nhr-10 encodes a predicted nuclear hormone receptor diverged from nuclear hormone receptors in other phyla; its mRNA is expressed throughout development with possibly lower expression from the L4 larval to adult stages, and the protein is expressed in neuronal processes. WormBase CDS description: retinoic acid
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0280.9 Aff_B0280.9 P W All gene names: B0280.9; 3I212; CE00816; WBGene00015104; WP:CE00816
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

B0281.4 Aff_B0281.4 P W All gene names: B0281.4; 2C586; CE32096; WBGene00015111; WP:CE32096
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0281.5 Aff_B0281.5 P W All gene names: B0281.5; 2C588; CE07716; WBGene00015112; WP:CE07716
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001 Fig1                                             
                                              hermaphrodite-enriched neuro, Jones et al 2001  Non                                
                                              dauer genes P<0.05, Murphy et al 2003  Fig2 Class2                                 
                                              shorten lifespan, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, intrinsic, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, list of genes in                                 
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

B0284.3 Aff_B0284.3 P W All gene names: B0284.3; 3F468; CE28525; WBGene00007133; WP:CE28525
B0285.3 Aff_B0285.3 P W All gene names: B0285.3; 3F432; CE00667; WBGene00007136; WP:CE00667
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0285.4 Aff_B0285.4 P W All gene names: B0285.4; 3F433; CE00643; WBGene00007137; WP:CE00643
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

B0285.5 Aff_B0285.5 P W All gene names: hse-5; B0285.5; 3F435; CE36681; NM_065475; WBGene00002003; WP:CE36681 WormBase description: hse-5 encodes a D-glucuronyl C5-epimerase.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

B0285.9 Aff_B0285.9 P W All gene names: ckb-2; B0285.9; 3F459; CE33591; NM_065479; WBGene00000512; WP:CE33591 WormBase description: choline kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              Romagnolo et al 2002  Fig3b signaling, ViswanathanM et                             
                                              al 2005  S2 daf-16 Resveratrol, Wang et al 2003  S3                                
                                              genes pass one-way ANOVA, Wang et al 2003  S4 Early                                
                                              genes, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

B0303.11 Aff_B0303.11, Aff_B0303.12 P W All gene names: B0303.11; 3J794; CE39314; WBGene00015131; WP:CE39314
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0303.15 Aff_B0303.15 P W All gene names: B0303.15; 3J807; CE00004; WBGene00015133; WP:CE00004 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Ribosomal protein L11
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

B0303.3 Aff_B0303.3 P W All gene names: B0303.3; B0303.3.1; B0303.3.2; B0303.3.3; 3J774; CE00561; WBGene00015125; WP:CE00561 WormBase description: B0303.3 is orthologous to the human gene 3-KETOACYL-COA THIOLASE BETA-SUBUNIT OF TRIFUNCTIONAL PROTEIN (HADHB; OMIM:143450), which when mutated leads to disease. WormBase CDS description: Acetyl-coa acetyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

B0303.4 Aff_B0303.4 P W All gene names: B0303.4; B0303.4.1; B0303.4.2; 3J781; CE29540; WBGene00015126; WP:CE29540
B0303.7 Aff_B0303.7 P W All gene names: B0303.7; 3J787; CE36521; WBGene00015128; WP:CE36521 WormBase description: Neutrophil oxidase factor
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

B0303.9 Aff_B0303.9 P W All gene names: SLP-1; B0303.9; 3J791; CE00539; WBGene00015130; WP:CE00539 WormBase description: SLP-1
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0304.1 Aff_B0304.1 P W All gene names: hlh-1; B0304.1; 2E811; CE02423; CE30067; CE31766; MyoD1; WBGene00001948; WP:CE02423; WP:CE30067; WP:CE31766 WormBase description: hlh-1 encodes a basic helix-loop-helix (bHLH) transcription factor that is the sole C. elegans member of the myogenic regulatory factor (MRF) subgroup of bHLH proteins; in C. elegans, HLH-1 activity is required during embryonic development for the proper differentiation and function of body wall muscle cells, indicating that unlike its vertebrate counterparts, hlh-1 is not absolutely required for body wall muscle specification; however, ectopic expression of hlh-1 in the embryo is sufficient to convert nearly all embryonic cell types to a muscle-like fate; in regulating body wall muscle cell development in some cell lineages, hlh-1 likely lies downstream of the PAL-1 homeodomain protein that is required for specification of the C and D founder cell fates; HLH-1 is expressed in nuclei and first appears in body wall muscle precursors beginning at the ~80-cell stage of embryogenesis; expression then continues in these cells and their differentiated descendants throughout embryonic, larval, and adult stages of development. WormBase CDS description: helix-loop-helix transcription factor
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph, Roy                            
                                              et al 2002  S2 positivecontrol L1 muscle, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

B0304.2 Aff_B0304.2 P W All gene names: B0304.2; 2E815; CE02424; WBGene00015134; WP:CE02424
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

B0304.4 Aff_B0304.4 P W All gene names: B0304.4; 2E812; CE03872; WBGene00015136; WP:CE03872
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0304.8 Aff_B0304.5 P W All gene names: sra-35; B0304.8; 2E816; CE38021; NM_182233; WBGene00005061; WP:CE38021 WormBase description: 7TM chemoreceptor, sra family
B0310.5 Aff_B0310.5 P W All gene names: ugt-46; B0310.5; CE03878; WBGene00015141; WP:CE03878; XB146 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0334.11 Aff_B0334.11 P W All gene names: mel-19; ooc-3; B0334.11; 2L784; CE19661; CE32788; NM_064055; NM_182110; WBGene00003868; WP:CE19661; WP:CE32788 WormBase description: ooc-3 encodes a nematode-specific protein with a predicted signal sequence, four predicted transmembrane domains, and two putative PEST sequences; OOC-3 is probably localized to the endoplasmic reticulum (ER), and is maternally required for correct localization of PAR-2 and PAR-3 in the P1 blastomere of the two-cell stage embryo; specifically, OOC-3 is required for restricting PAR-3 to the anterior cortex of the P1 blastomere to assure PAR-2 localization at the posterior cortex; more generally, OOC-3 is required to establish asymmetrical anterior-posterior cortical domains and spindle orientation in P1.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0334.2 Aff_B0334.2 P W All gene names: twk-5; B0334.2; 2L774; CE36421; CE37874; WBGene00006660; WP:CE36421; WP:CE37874 WormBase description: twk-5 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; as loss of TWK-5 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of TWK-5 in C. elegans development and/or behavior is not yet known; TWK-5 may, however, function redundantly with other TWK channels; the TWK-5 expression pattern is not yet known.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

B0334.4 Aff_B0334.4 P W All gene names: B0334.4; 2L787; CE02936; WBGene00007144; WP:CE02936 WormBase description: Yeast hypothetical protein L8167.12 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

B0334.5 Aff_B0334.5 P W All gene names: B0334.5; 2L789; CE30122; WBGene00007145; WP:CE30122 WormBase description: phytoene synthase precursor
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0334.6 Aff_B0334.6 P W All gene names: B0334.6; 2L805; CE30473; WBGene00007146; WP:CE30473 WormBase description: Gonadotropin-releasing hormone receptor like protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0334.8 Aff_B0334.8 P W All gene names: age-1; daf-23; B0334.8; 2L810; CE23506; NM_064061; WBGene00000090; WP:CE23506 WormBase description: age-1 encodes the C. elegans ortholog of the phosphoinositide 3-kinase (PI3K) p110 catalytic subunit; AGE-1, supplied maternally and embryonically, is a central component of the C. elegans insulin-like signaling pathway, lying downstream of the DAF-2/insulin receptor and upstream of both the PDK-1 and AKT-1/AKT-2 kinases and the DAF-16 forkhead type transcription factor, whose negative regulation is the key output of the insulin signaling pathway; in accordance with its role in insulin signaling, AGE-1 activity is required for regulation of metabolism, life span, dauer formation, stress resistance, fertility, and embryonic development; although the age-1 expression pattern has not yet been reported, ectopic expression studies indicate that pan-neuronal age-1 expression is sufficient to rescue life-span defects, while neuronal, intestinal, or muscle expression can partially rescue dauer formation, and neuronal or muscle expression can rescue metabolic defects. WormBase CDS description: phosphatidylinositol 3-kinase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T2 lifespan and                                 
                                              Dauer, McCarroll et al 2004  SFig1-4 conserved w/                                  
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, ViswanathanM et al 2005  S2                               
                                              sir-2.1 regulated                                                                  

B0336.1 Aff_B0336.1 P W All gene names: wrm-1; B0336.1; B0336.1.1; B0336.1.2; 3G815; CE26743; NM_065835; WBGene00006943; WP:CE26743
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0336.10 Aff_B0336.10 P W All gene names: rpl-23; B0336.10; B0336.10.1; B0336.10.2; 3G794; CE00778; NM_065830; WBGene00004435; WP:CE00778 WormBase description: rpl-23 encodes a large ribosomal subunit L23 protein.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

B0336.2 Aff_B0336.2 P W All gene names: arf-1.2; arf-1; B0336.2; B0336.2.1; B0336.2.2; 3G805; ARF/1; CE00696; NM_065834; WBGene00000182; WP:CE00696 WormBase description: arf-1 encodes an ADP-ribosylation factor homolog required in vivo for embryonic development, fertility, locomotion, vulval development, and cuticular synthesis; ARF proteins are N-myristoylated GTPases that regulate membrane traffic and the actin cytoskeleton, and that activate both phospholipase D1 (PLD1) and phosphatidylinositol 4-phosphate 5-kinase. WormBase CDS description: ARF
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

B0336.3 Aff_B0336.3 P W All gene names: B0336.3; 3G803; CE29542; WBGene00015143; WP:CE29542
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

B0336.4 Aff_B0336.4 P W All gene names: rgs-5; B0336.4; 3G791; CE32098; NM_065828; WBGene00004348; WBGene00015144; WP:CE32098 WormBase description: rgs-5 encodes a regulator of G protein signaling; by homology, RGS-5 is predicted to function as a GTPase-activating protein that binds G protein alpha subunits and negatively regulates heterotrimeric G protein signaling; loss of rgs-5 activity via RNAi or a deletion mutation results in no obvious defects, and likewise, rgs-5 overexpression has no measurable effect on egg-laying behavior, locomotion, or viability; an rgs-5 transcriptional reporter is expressed in head neurons in larvae and adults.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Climbing, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

B0336.6 Aff_B0336.6 P W All gene names: B0336.6; B0336.6.1; B0336.6.2; 3G780; CE29545; WBGene00015146; WP:CE29545 WormBase description: B0336.6 encodes an Abl interactor ortholog, with an SH3 domain, required for embryonic development; mammalian Abl interactors are associated with synaptosomes, growth cone particles, and macropinocytic vesicles, and may regulate Rac-dependent cytoskeletal reorganization and Abl kinase activity; B0336.6's orthologs include human SSH3BP1 (ABI1; OMIM:603050, mutated in acute myeloid leukemia), ABI-2 (OMIM:606442), and NESH (OMIM:606363); B0336.6 binds UNC-53 in two-hybrid screens.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

B0336.7 Aff_B0336.7 P W All gene names: B0336.7; B0336.7b.1; B0336.7b.2; 3G784; CE29546; CE37741; WBGene00015147; WP:CE29546; WP:CE37741
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

B0336.8 Aff_B0336.8 P W All gene names: lgg-3; B0336.8; 3G786; CE00776; NM_065827; WBGene00002982; WP:CE00776 WormBase description: lgg-3 encodes a hydrophilic protein that is orthologous to Saccharomyces cerevisiae autophagy protein Apg12p; by homology, LGG-3 is predicted to function as a modifier protein required for a protein conjugation system essential for autophagy; in the context of this conjugation system, LGG-3 is predicted to interact with Apg7p and Apg5p homologs (encoded by M7.5 and Y71G12B.12a, respectively) to effect bulk degradation of cytoplasmic components under conditions of starvation or cellular remodeling; free LGG-3 is predicted to localize to the cytoplasm, while LGG-3 conjugated to the Apg5p homolog is predicted to associate with membrane compartments; loss of lgg-3 activity via large-scale RNAi screens results in no obvious developmental or behavioral abnormalities.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

B0336.9 Aff_B0336.9 P W All gene names: swp-1; B0336.9; B0336.9b.1; B0336.9b.2; 3G792; CE30068; CE31143; CE31144; CE31145; CE31146; CeSWAP; NM_171132; WBGene00006359; WP:CE30068; WP:CE31143; WP:CE31144; WP:CE31145; WP:CE31146 WormBase description: swp-1 encodes a protein containing two SWAP (Suppressor-of-White-APricot splicing regulator) domains that have been implicated in RNA binding; orthologous to C. briggsae CBG09000.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

B0348.4 Aff_B0348.3 P W All gene names: egl-8; pbo-2; B0348.4; 5A521; CE30588; CE30589; CE36909; WBGene00001177; WP:CE30588; WP:CE30589; WP:CE36909 WormBase description: egl-8 encodes a phospholipase C beta homolog that affects pharyngeal pumping, defecation, and activity levels; it is genetically downstream of egl-30 with respect to aldicarb-induced paralysis, and is expressed in most or all neurons, with the strongest staining in the head and tail ganglia, and in the intestine.
B0348.6 Aff_B0348.6 P W All gene names: ife-3; B0348.6; B0348.6a.1; B0348.6a.2; 5A486; CE17331; CE27570; CE30590; NM_070722; NM_070723; NM_171920; WBGene00002061; WP:CE17331; WP:CE27570; WP:CE30590 WormBase description: ife-3 encodes one of five C. elegans homologs of the mRNA cap-binding protein eIF4E; by homology, IFE-3 is predicted to bind capped mRNA and mediate its recruitment to ribosomes during translation initiation; in vitro, IFE-3 binds a monomethylated guanosine cap structure but does not bind a trimethylated guanosine cap, which suggests that IFE-3 likely mediates translation of those mRNAs that do not contain a spliced-leader sequence; of the C. elegans eIF4E isoforms, IFE-3 is the most similar to human eIF4E and is the only isoform required for viability (homozygous ife-3 mutant embryos arrest in the early division stages of embryogenesis); IFE-3 is enriched in the adult gonad.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

B0361.10 Aff_B0361.8 P W All gene names: B0361.10; CE20451; WBGene00015164; WP:CE20451 WormBase description: synaptobrevin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

B0361.2 Aff_B0361.1, Aff_B0361.2, Aff_F56C9.4 P W All gene names: B0361.2; 3I397; CE33549; CE38480; WBGene00015156; WP:CE33549; WP:CE38480
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0361.3 Aff_B0361.3 P W All gene names: B0361.3; B0361.3.1; B0361.3.2; 3I373; CE34242; WBGene00015157; WP:CE34242
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0361.5 Aff_B0361.5 P W All gene names: psd-1; B0361.5; 3I360; CE37076; CE37696; WBGene00015159; WP:CE37076; WP:CE37696 WormBase description: Phosphatidylserine decarboxylase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

B0361.6 Aff_B0361.6 P W All gene names: B0361.6; 3I366; CE00835; WBGene00015160; WP:CE00835
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

B0361.7 Aff_B0361.7 P W All gene names: B0361.7; 3I374; CE32100; WBGene00015161; WP:CE32100 WormBase description: Acid phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

B0361.9 Aff_B0361.9 P W All gene names: B0361.9; 3I388; CE00838; WBGene00015163; WP:CE00838
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, ViswanathanM et al 2005  S2 sir-2.1 regulated,                             
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S8 SAGE genes in                               
                                              the dauer exit, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

B0365.1 Aff_B0365.1 P W All gene names: B0365.1; 5N599; CE07719; WBGene00007150; WP:CE07719 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: ATP citrate lyase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0365.3 Aff_B0365.3 P W All gene names: eat-6; spa-1; B0365.3; B0365.3.1; B0365.3.2; 5N608; CE07721; NM_073868; NaK/1; WBGene00001137; WP:CE07721 WormBase description: eat-6 encodes an ortholog of the alpha subunit of a sodium/potassium ATPase, which in turn affects Na+,K(+)-ATPase activity of membranes by affecting the level of the phosphorylated intermediate of the Na+,K(+)-ATPase; EAT-6 affects relaxation of the pharyngeal muscles, fertility (and thus affects feeding); EAT-6 also affects body length, life span, and ASE, ASI and ASJ axonal outgrowth. WormBase CDS description: Na(+)/K(+) ATPase alpha subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0379.1 Aff_B0379.1 P W All gene names: B0379.1; 1K653; CE20452; WBGene00007155; WP:CE20452
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

B0379.3 Aff_B0379.3 P W All gene names: mut-16; pqn-3; B0379.3; 1K661; CE30474; CE30475; NM_060259; NM_060260; WBGene00003508; WP:CE30474; WP:CE30475 WormBase description: mut-16 encodes a glutamine/asparagine (Q/N)-rich domain-containing protein that lacks obvious homologs outside of other nematode species; MUT-16 activity is required for RNA-mediated interference (RNAi), transgene silencing in germ-line and somatic tissues, and for maintaining low levels of transposon mobilization; MUT-16 is thus predicted to play a role in chromatin organizataion and/or regulation of gene expression.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0393.1 Aff_B0393.1 P W All gene names: rps-0; B0393.1; B0393.1.1; B0393.1.2; 3F842; CE00854; NM_065577; WBGene00004469; WP:CE00854 WormBase description: rps-0 encodes a small ribosomal subunit SA protein that appears to function as both a ribosomal component and a laminin receptor; by homology, RPS-0 is predicted to play roles in protein biosynthesis and cell adhesion; in C. elegans, RPS-0 activity is required for embryonic and germline development, vulval morphogenesis, and the overall health of the animal. WormBase CDS description: 40S ribosomal protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

B0393.2 Aff_B0393.2 P W All gene names: rbg-3; B0393.2; B0393.2.1; B0393.2.2; 3F845; CE00855; WBGene00007167; WP:CE00855 WormBase description: Probable rabGAP domains
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0393.3 Aff_B0393.3 P W All gene names: B0393.3; 3F849; CE00856; WBGene00007168; WP:CE00856 WormBase description: Leucine Rich Repeat (2 copies) (2 domains)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, Fig2b shared gemlines, Reinke et al 2004, list of                            
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt males vs glp4 male                                    
                                              enriched , Reinke et al 2004, wt herm vs wt male                                   
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

B0393.6 Aff_B0393.6 P W All gene names: B0393.6; 3F870; CE33964; WBGene00007171; WP:CE33964 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

B0393.7 Aff_B0393.7 P W All gene names: B0393.7; 3F868; CE39121; WBGene00007172; WP:CE39121 WormBase description: LDL receptor ligand-binding repeat bearing protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0395.3 Aff_B0395.3 P W All gene names: B0395.3; B0395.3.1; B0395.3.2; CE02944; WBGene00007175; WP:CE02944; XQ650 WormBase description: B0395.3 is orthologous to the human gene CHOLINE ACETYLTRANSFERASE ISOFORM R (CHAT; OMIM:118490), which when mutated leads to disease. WormBase CDS description: choline O-acetyltransferase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0403.4 Aff_B0403.4 P W All gene names: tag-320; B0403.4; CE03880; WBGene00015168; WP:CE03880; XH686 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: protein disulfide-isomerase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0410.2 Aff_B0410.2 P W All gene names: vang-1; B0410.2; CE06708; CE27572; NM_076099; NM_076100; WBGene00015171; WP:CE06708; WP:CE27572; XD507
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0412.3 Aff_B0412.3 P W All gene names: B0412.3; B0412.3.1; B0412.3.2; 3B425; CE03884; WBGene00015173; WP:CE03884
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

B0412.4 Aff_B0412.4 P W All gene names: rps-29; B0412.4; B0412.4.1; B0412.4.2; 3B413; CE26849; NM_064862; WBGene00004498; WP:CE26849 WormBase description: rps-29 encodes a small ribosomal subunit S29 protein; by homology, RPS-29 is predicted to function in protein biosynthesis; in C. elegans, RPS-29 activity is broadly required for embryonic and germline development, normal body coloration and morphology, normal postembryonic growth rates, and the overall health of the animal. WormBase CDS description: 40S ribosomal protein S29
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

B0414.3 Aff_B0414.3 P W All gene names: hil-5; B0414.3; 1G351; CE07733; NM_059277; WBGene00001856; WP:CE07733 WormBase description: histone H1
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0414.5 Aff_B0414.5 P W All gene names: cpb-3; B0414.5; 1G366; CE07735; NM_059279; WBGene00000772; WP:CE07735 WormBase description: The cbp-3 gene encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog. WormBase CDS description: RNA binding protein
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

B0414.6 Aff_B0414.6 P W All gene names: glh-3; B0414.6; 1G370; CE07736; NM_059280; WBGene00001600; WP:CE07736 WormBase description: glh-3 encodes a predicted DEAD-like RNA helicase; GLH-3 interacts with itself and with CSN-5, KGB-1, ZYX-1, and GLH-1 in vitro, and is expressed in association with P granules throughout development. WormBase CDS description: RNA helicase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0414.7 Aff_B0414.7 P W All gene names: mtk-1; B0414.7; 1G372; CE07737; CE27573; NM_059281; NM_059282; WBGene00003472; WP:CE07737; WP:CE27573 WormBase description: protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0414.8 Aff_B0414.8 P W All gene names: B0414.8; 1G380; CE30413; CE36910; WBGene00015176; WP:CE30413; WP:CE36910
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0416.4 Aff_B0416.4 P W All gene names: B0416.4; CE02434; WBGene00015180; WP:CE02434; XJ899
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0416.5 Aff_B0416.5 P W All gene names: B0416.5; B0416.5a.1; B0416.5a.2; CE02435; CE29548; WBGene00015181; WP:CE02435; WP:CE29548; XJ888
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

B0416.6 Aff_B0416.6 P W All gene names: gly-13; B0416.6; CE26434; NM_077165; WBGene00001638; WP:CE26434; XJ912 WormBase description: alpha-1,3-mannosyl-glycoprotein beta-1,2-n-acetyglucosaminyltransferase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0432.1 Aff_B0432.1 P W All gene names: B0432.1; 2A589; CE07739; WBGene00015183; WP:CE07739
B0432.10 Aff_B0432.10 P W All gene names: B0432.10; 2A574; CE07748; WBGene00015191; WP:CE07748
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0432.13 Aff_B0432.9 P W All gene names: B0432.13; CE29945; WBGene00015194; WP:CE29945
B0432.2 Aff_B0432.2 P W All gene names: B0432.2; 2A581; CE07740; WBGene00015184; WP:CE07740
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

B0432.3 Aff_B0432.3 P W All gene names: B0432.3; 2A579; CE07741; WBGene00015185; WP:CE07741
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0432.4 Aff_B0432.4 P W All gene names: B0432.4; 2A577; CE32102; WBGene00015186; WP:CE32102 WormBase description: mitochrondrial 2-oxoglutarate/malate carrier protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

B0454.1 Aff_B0454.1 P W All gene names: B0454.1; 2D349; CE20455; WBGene00015195; WP:CE20455 WormBase description: lin-8 is a class A synthetic multivulva (synMuv) gene that functions redundantly with class B synMuv genes to negatively regulate Ras-mediated signaling during vulval induction.
B0454.6 Aff_B0454.6 P W All gene names: B0454.6; 2D325; CE07756; WBGene00015197; WP:CE07756 WormBase description: amino acid permease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

B0454.9 Aff_B0454.9 P W All gene names: B0454.9; 2D344; CE07759; WBGene00015200; WP:CE07759
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma                                     

B0457.1 Aff_B0457.1 P W All gene names: lat-1; B0457.1; 2J197; CE02945; CE32789; CE36086; NM_063493; NM_182149; WBGene00002251; WP:CE02945; WP:CE32789; WP:CE36086 WormBase description: lat-1 encodes a predicted latrophilin that affects embryonic elongation, pharyngeal development, and reproductive organ formation; apically localized in developing epithelia and localized to presynaptic surfaces in neurons.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

B0464.1 Aff_B0464.1 P W All gene names: drs-1; B0464.1; B0464.1.1; B0464.1.2; 3K580; CE00015; NM_066688; WBGene00001094; WP:CE00015 WormBase description: drs-1 encodes a putative aspartyl(D) tRNA synthetase WormBase CDS description: Aspartyl-tRNA synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

B0464.2 Aff_B0464.2 P W All gene names: B0464.2; 3K585; CE20456; WBGene00007184; WP:CE20456 WormBase description: TPR Domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

B0464.3 Aff_B0464.3 P W All gene names: nlp-36; B0464.3; B0464.3.1; B0464.3.2; 3K579; CE00017; WBGene00007185; WP:CE00017
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0464.4 Aff_B0464.4 P W All gene names: bre-3; B0464.4; B0464.4.1; B0464.4.2; 3K560; CE33592; NM_066686; WBGene00000268; WP:CE33592 WormBase description: bre-3 encodes a protein similar to beta-glycosyltransferases from bacteria that is required for the toxicity of Bacillus thuringiensis Cry5B; BRE-3 may act in a pathway with bre-5 and is expressed and functions in the gut epithelium. WormBase CDS description: zw4
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

B0464.6 Aff_B0464.6 P W All gene names: B0464.6; B0464.6.1; B0464.6.2; B0464.6.3; 3K554; CE33965; WBGene00007186; WP:CE33965
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

B0464.8 Aff_B0464.7 P W All gene names: tag-342; B0464.8; 3K559; CE36465; WBGene00007187; WP:CE36465
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0491.5 Aff_B0491.5 P W All gene names: B0491.5; B0491.5.1; B0491.5.2; B0491.5.3; 2L634; CE02107; WBGene00007192; WP:CE02107
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0491.6 Aff_B0491.6 P W All gene names: B0491.6; B0491.6.1; B0491.6.2; 2L636; CE02108; WBGene00007193; WP:CE02108
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

B0491.7 Aff_B0491.7 P W All gene names: B0491.7; 2L641; CE02109; WBGene00007194; WP:CE02109 WormBase description: B0491.7 encodes a putative diphthine synthase orthologous to S. cerevisiae DPH5; DPH5 is an S-adenosylmethionine:EF-2 methyltransferase required for the enzymatic conversion of 3-amino-3-carboxypropyl-histidine to diphthine; DPH5 adds at least the last two of the three methyl groups present in diphthine, and is homologous to bacterial AdoMet:uroporphyrinogen III methyltransferases. WormBase CDS description: diphthine synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0495.2 Aff_B0495.2 P W All gene names: B0495.2; 2H991; CE01761; WBGene00015203; WP:CE01761 WormBase description: CDC2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

B0495.5 Aff_B0495.5 P W All gene names: B0495.5; B0495.5.1; B0495.5.2; 2H986; CE29948; WBGene00015204; WP:CE29948
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S7 SAGE genes in the dataset, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit                                                    

B0495.6 Aff_B0495.6 P W All gene names: B0495.6; 2H988; CE01764; WBGene00015205; WP:CE01764
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0495.7 Aff_B0495.7 P W All gene names: B0495.7; B0495.7.1; B0495.7.2; 2H992; CE29550; WBGene00015206; WP:CE29550
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

B0495.8 Aff_B0495.8 P W All gene names: B0495.8; 2H996; CE01766; CE29949; WBGene00015207; WP:CE01766; WP:CE29949
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

B0495.9 Aff_B0495.9 P W All gene names: B0495.9; 2H998; CE01767; WBGene00015208; WP:CE01767
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

B0496.8 Aff_B0496.8 P W All gene names: tag-224; B0496.8; 4I214; CE06720; WBGene00015217; WP:CE06720 WormBase description: LIM-domain protein
B0507.10 Aff_B0507.8 P W All gene names: B0507.10; 5J232; CE28875; WBGene00015227; WP:CE28875
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, wt herm vs wt male enriched gen                                        

B0507.2 Aff_B0507.2 P W All gene names: B0507.2; 5J255; CE32561; WBGene00015219; WP:CE32561
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0507.3 Aff_B0507.3 P W All gene names: B0507.3; 5J251; CE07762; CE39664; WBGene00015220; WP:CE07762; WP:CE39664
B0511.1 Aff_B0511.1 P W All gene names: fkb-7; B0511.1; 1L245; CE26851; NM_060391; WBGene00001432; WP:CE26851 WormBase description: fkb-7 encodes a peptidylprolyl cis/trans isomerase homologous to mammalian FK506-binding proteins; by homology, FKB-7 could function in a number of different processes including protein folding, signal transduction, and regulation of muscle contraction; however, as loss of fkb-7 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of FKB-7 in C. elegans development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

B0511.10 Aff_B0511.10 P W All gene names: eif-3.E; B0511.10; 1L218; CE17349; NM_060384; WBGene00001228; WP:CE17349 WormBase description: eif-3.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

B0511.12 Aff_B0511.12 P W All gene names: B0511.12; 1L232; CE28877; WBGene00015237; WP:CE28877
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated                                                   

B0511.13 Aff_B0511.8 P W All gene names: B0511.13; 1L210; CE32106; WBGene00015238; WP:CE32106
B0511.4 Aff_B0511.4 P W All gene names: tag-344; B0511.4; 1L223; CE17343; WBGene00015230; WP:CE17343 WormBase description: protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

B0511.6 Aff_B0511.6 P W All gene names: B0511.6; B0511.6.1; B0511.6.2; 1L203; CE26853; WBGene00015232; WP:CE26853 WormBase description: helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

B0511.7 Aff_B0511.7 P W All gene names: B0511.7; 1L208; CE34246; WBGene00015233; WP:CE34246
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0511.9 Aff_B0511.9 P W All gene names: B0511.9; 1L216; CE17348; CE26854; WBGene00015235; WP:CE17348; WP:CE26854
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

B0513.2 Aff_B0513.2 P W All gene names: B0513.2; 4O649; CE23510; WBGene00007195; WP:CE23510
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen                                              

B0513.3 Aff_B0513.3 P W All gene names: rpl-29; B0513.3; B0513.3.1; B0513.3.2; 4O647; CE15559; NM_070270; WBGene00004443; WP:CE15559 WormBase description: rpl-29 encodes a large ribosomal subunit L29 protein; by homology, RPL-29 is predicted to function in protein biosynthesis; in C. elegans, loss of rpl-29 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities. WormBase CDS description: 60S ribosomal protein L29
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

B0523.3 Aff_B0523.3, Aff_B0523.4 P W All gene names: pgl-2; B0523.3; 3J758; CE20462; NM_066510; WBGene00003993; WP:CE20462
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0523.5 Aff_B0523.5 P W All gene names: CE-FLI-1; ach-1; fli-1; B0523.5; 3J768; CE36522; NM_066512; WBGene00001443; WP:CE36522 WormBase description: fli-1 encodes a homolog of Drosophila flightless-I; can interact with human Ha-Ras and human actin in vitro; mRNA levels are highest in embryos.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

B0546.1 Aff_B0546.1 P W All gene names: B0546.1; B0546.1.1; B0546.1.2; B0546.1.3; 4E151; CE16792; WBGene00015248; WP:CE16792 WormBase description: ATPase inhibitor
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

B0546.2 Aff_B0546.2 P W All gene names: B0546.2; B0546.2.1; B0546.2.2; 4E138; CE30591; WBGene00015249; WP:CE30591
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

B0546.4 Aff_B0546.4 P W All gene names: B0546.4; 4E148; CE16795; CE33354; WBGene00015251; WP:CE16795; WP:CE33354
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15,                                   
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order, Romagnolo                              
                                              et al 2002  Fig3b Unkown, Romagnolo et al 2002 Fig5                                
                                              genes in let-60 timecour, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

B0547.1 Aff_B0547.1 P W All gene names: csn-5; B0547.1; B0547.1.1; B0547.1.2; 4G415; CE06722; NM_068440; WBGene00000817; WP:CE06722 WormBase description: csn-5 encodes an ortholog of subunit 5 of the COP9 signalosome complex (CSN5), which in turn is a pan-eukaryotic multiprotein complex that positively regulates E3 ubiquitin ligases, physically interacts with SCF-type E3 ubiquitin ligases, and probably regulates protein degradation; CSN-5 (along with KGB-1 and ZYX-1) physically binds germline RNA helicases (GLH proteins), and csn-5(RNAi) results in sterile worms with small gonads and no oocytes, causing oogenesis to cease, but not affecting the initial assembly of P granules -- a defect essentially identical to that produced by RNAi with a combination of glh-1 and glh-4.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0554.7 Aff_B0554.7, Aff_B0554.8 P W All gene names: B0554.7; B0554.8; B0554.9; 5A916; CE25744; WBGene00015260; WP:CE25744
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0563.4 Aff_B0563.3, Aff_B0563.4 P W All gene names: tag-132; B0563.4; CE30843; WBGene00006479; WP:CE30843; XJ777
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0564.1 Aff_B0564.1 P W All gene names: tin-9.2; B0564.1; 4N865; CE20469; CE37950; NM_070119; WBGene00007201; WBGene00044083; WP:CE20469; WP:CE37950 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0564.11 Aff_B0564.7 P W All gene names: B0564.11; 4N871; CE36970; WBGene00023421; WP:CE36970
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen                                              

B0564.2 Aff_B0564.2 P W All gene names: B0564.2; 4N875; CE05176; WBGene00007202; WP:CE05176
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C01A2.2 Aff_C01A2.2 P W All gene names: C01A2.2; 1N989; CE07784; WBGene00007214; WP:CE07784
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C01A2.3 Aff_C01A2.3 P W All gene names: C01A2.3; 1N981; CE38582; WBGene00007215; WP:CE38582 WormBase description: cytochrome oxidase biogenesis protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, Reinke et al 2004, wt herm vs wt male                                    
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

C01A2.4 Aff_C01A2.4 P W All gene names: C01A2.4; 1N983; CE34247; WBGene00007216; WP:CE34247
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C01A2.5 Aff_C01A2.5 P W All gene names: C01A2.5; 1N977; CE07787; WBGene00007217; WP:CE07787 WormBase description: S.pombe hypothetical protein C1D4.09C like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C01B10.5 Aff_C01B10.5 P W All gene names: hil-7; C01B10.5; C01B10.5b.1; C01B10.5b.2; H1.Q; 4H411; CE06736; CE26856; CE26857; CE33357; NM_068626; WBGene00001858; WP:CE06736; WP:CE26856; WP:CE26857; WP:CE33357 WormBase description: hil-7 encodes a histone H1.1 isoform that is required in the germline for chromatin silencing (assayed by silencing of transgenic DNA), for proliferation and differentiation, and for fertility; hil-7(RNAi) phenotypes resemble the Mes phenotype resulting from the desilencing of genes required for somatic differentiation in the germline; HIL-7 is required in both the hermaphrodite and the male germlines, and is ubiquitously expressed in all nuclei (somatic and germline).
C01B10.8 Aff_C01B10.8 P W All gene names: C01B10.8; C01B10.8.1; C01B10.8.2; 4H401; CE06739; WBGene00015282; WP:CE06739
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C01B10.9 Aff_C01B10.9 P W All gene names: C01B10.9; 4H399; CE37181; WBGene00015283; WP:CE37181
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C01B12.8 Aff_C01B12.8 P W All gene names: C01B12.8; CE07796; NM_061235; WBGene00015291; WP:CE07796
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories                                                                

C01B7.1 Aff_C01B7.1 P W All gene names: C01B7.1; C01B7.1a.1; C01B7.1a.2; 5J271; CE29553; CE30719; WBGene00015274; WP:CE29553; WP:CE30719 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan                                                                           

C01B7.6 Aff_C01B7.6 P W All gene names: rpm-1; rpm-3; sad-3; sam-1; syd-3; C01B7.6; 5J282; CE06730; NM_072866; WBGene00004457; WP:CE06730
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C01B9.1 Aff_C01B9.1 P W All gene names: C01B9.1; 2O67; CE17359; WBGene00007220; WP:CE17359
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C01C10.3 Aff_C01C10.3 P W All gene names: acl-12; C01C10.3; CE02449; NM_076859; WBGene00015295; WP:CE02449; XI58
C01F1.1 Aff_C01F1.1 P W All gene names: C01F1.1; 2E595; CE06742; WBGene00015296; WP:CE06742 WormBase description: dna binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C01F1.2 Aff_C01F1.2 P W All gene names: C01F1.2; 2E591; CE06743; WBGene00015297; WP:CE06743 WormBase description: C01F1.2 is orthologous to the human gene SCO (CYTOCHROME OXIDASE DEFICIENT, YEAST) HOMOLOG 1 (SCO1; OMIM:603644), which when mutated leads to early-onset hepatic failure; the C01F1.2 protein is predicted to be mitochondrial with 68% accuracy.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

C01F1.6 Aff_C01F1.6 P W All gene names: C01F1.6; 2E574; CE39125; WBGene00015301; WP:CE39125
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, list of                             
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C01F6.1 Aff_C01F6.1 P W All gene names: C01F6.1; 4J865; CE02950; WBGene00007221; WP:CE02950
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01F6.4 Aff_C01F6.4 P W All gene names: fem-3; C01F6.4; 4J871; CE02953; NM_069186; WBGene00001413; WP:CE02953 WormBase description: fem-3 encodes a novel protein that promotes male development in all tissues. WormBase CDS description: sex-determining protein (FEM-3)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01F6.5 Aff_C01F6.5 P W All gene names: aly-1; ref-1; C01F6.5; 4J873; CE02954; NM_069187; WBGene00000120; WP:CE02954 WormBase description: RNA recognition motif. (aka RRM, RBD, or RNP domain)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, mixed oogenesis soma, Romagnolo et al 2002                             
                                              Fig3b Metabolism, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C01F6.8 Aff_C01F6.8 P W All gene names: icl-1; C01F6.8; 4J860; CE17360; CE30069; ICln; WBGene00002046; WP:CE17360; WP:CE30069 WormBase description: The icl-1 gene encodes, through alternative splicing, two alternative forms (ICL-1A, or 'IClnN1', and ICL-1B, or 'IClnN2'), with distinct electrophysiological properties, of an anion channel homolog. WormBase CDS description: nucleotide-sensitive chloride ion channel
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, fem1 enriched                                 
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Romagnolo et                             
                                              al 2002  Fig3b Transporters, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C01F6.9 Aff_C01F6.9 P W All gene names: C01F6.9; 4J862; CE17361; NX; WBGene00007223; WP:CE17361 WormBase description: The C01F6.9 gene resides in an operon that also contains the genes icl-1 and lpl-1.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C01G10.10 Aff_C01G10.10 P W All gene names: C01G10.10; 5P562; CE20480; WBGene00007237; WP:CE20480 WormBase description: O-sialoglycoprotein endopeptidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C01G10.11 Aff_C01G10.11 P W All gene names: unc-76; C01G10.11; C01G10.11a.1; C01G10.11a.2; C01G10.11b.1; C01G10.11b.2; 5P559; CE39210; CE39211; NM_074311; WBGene00006808; WP:CE39210; WP:CE39211 WormBase description: UNC-76 protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C01G10.6 Aff_C01G10.6 P W All gene names: C01G10.6; 5P569; CE07815; WBGene00007233; WP:CE07815
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C01G10.7 Aff_C01G10.7 P W All gene names: C01G10.7; 5P567; CE07816; WBGene00007234; WP:CE07816 WormBase description: citrate lyase beta chain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

C01G10.8 Aff_C01G10.8 P W All gene names: C01G10.8; C01G10.8.1; C01G10.8.2; 5P564; CE07817; WBGene00007235; WP:CE07817
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01G12.3 Aff_C01G12.3 P W All gene names: C01G12.3; 2O868; CE15573; WBGene00007244; WP:CE15573
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, wt males vs glp4 male enriched ,                                
                                              Reinke et al 2004, spermatogenesis enriched genes,                                 
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, shared sperm                                                                 

C01G5.2 Aff_C01G5.2 P W All gene names: tag-292; C01G5.2; 4H292; CE06748; WBGene00015304; WP:CE06748
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C01G5.4 Aff_C01G5.4 P W All gene names: C01G5.4; 4H299; CE23512; WBGene00015306; WP:CE23512
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 daf-16 Resveratrol                                                     

C01G5.5 Aff_C01G5.5 P W All gene names: C01G5.5; 4H291; CE06751; WBGene00015307; WP:CE06751 WormBase description: aldehyde reductase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01G5.6 Aff_C01G5.6 P W All gene names: C01G5.6; 4H289; CE23513; WBGene00015308; WP:CE23513
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang                             
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0, Wang et al 2003                               
                                              S4 Dauer Enriched                                                                  

C01G5.8 Aff_C01G5.8 P W All gene names: C01G5.8; 4H315; CE07800; WBGene00015310; WP:CE07800
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, list of genes in                            
                                              cluster order, Reinke et al 2004, intrinsic, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004,                                
                                              list of genes in cluster E, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C01G6.2 Aff_C01G6.2 P W All gene names: C01G6.2; 2J557; CE02958; WBGene00007224; WP:CE02958
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, spermatogenesis enriched genes, Reinke et al                              
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes, Reinke et al 2004, wt vs glp-4                                
                                              enriched genes, Reinke et al 2004, list of genes in                                
                                              cluster D, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C01G6.3 Aff_C01G6.3 P W All gene names: C01G6.3; 2J561; CE37474; WBGene00007225; WP:CE37474
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01G6.4 Aff_C01G6.4 P W All gene names: C01G6.4; 2J562; CE00866; WBGene00007226; WP:CE00866 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C01G6.5 Aff_C01G6.5 P W All gene names: C01G6.5; 2J566; CE00867; WBGene00007227; WP:CE00867 WormBase description: Forkhead-associated (FHA) domain
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, list of                             
                                              genes in cluster E                                                                 

C01G6.6 Aff_C01G6.6 P W All gene names: tag-165; C01G6.6; C01G6.6a.1; C01G6.6a.2; C01G6.6a.3; 2J577; CE00868; CE32562; WBGene00006510; WP:CE00868; WP:CE32562 WormBase description: C01G6.6 encodes an ortholog of the human gene METHIONINE SYNTHASE REDUCTASE (MTRR), which when mutated leads to homocystinuria (OMIM:236270)
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 Cytochrome                                
                                              P450, Reinke et al 2004, intrinsic, Reinke et al 2004,                             
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, ViswanathanM et al 2005  S2                               
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Early genes, Wang et                            
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

C01G6.7 Aff_C01G6.7 P W All gene names: C01G6.7; 2J583; CE00869; WBGene00007228; WP:CE00869 WormBase description: 4-coumarate-coA ligase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, fem3 enriched genes,                             
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              list of genes in cluster D, Reinke et al 2004, GO                                  
                                              categories, Wang et al 2003  S3  genes pass one-way                                
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

C01G6.8 Aff_C01G6.8 P W All gene names: cam-1; kin-8; C01G6.8; 2J586; CE24774; CE32563; CE39126; WBGene00000289; WP:CE24774; WP:CE32563; WP:CE39126 WormBase description: The cam-1 gene encodes a receptor tyrosine kinase of the immunoglobulin superfamily that is orthologous to human ROR1 (OMIM:602336) and ROR2 (OMIM:602337, mutation of which leads to type B brachydactyly) and is required for locomotion, cell migration, asymmetric cell division, axon outgrowth, and dauer formation; CAM-1 is broadly expressed during embryogenesis and larval development with expression first appearing at the 200-cell stage of embryogenesis.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C01G8.1 Aff_C01G8.1 P W All gene names: C01G8.1; 1F842; CE07801; WBGene00015312; WP:CE07801
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01G8.2 Aff_C01G8.2 P W All gene names: cln-3.2; C01G8.2; C01G8.2.1; C01G8.2.2; 1F844; CE07802; NM_059155; WBGene00000540; WP:CE07802 WormBase description: cln-3.2 encodes a predicted transmembrane protein that comprises one of three C. elegans homologs of human CLN3 (OMIM:607042, mutations are associated with Batten disease (also known as juvenile neuronal ceroid lipofuscinosis), a recessively inherited childhood neurodegenerative lysosomal storage disease); loss of cln-3.2 activity via large-scale RNAi screens has been reported to result in either no defects or in embryonic lethality.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C01G8.3 Aff_C01G8.3 P W All gene names: dhs-1; C01G8.3; 1F848; CE07803; NM_059156; WBGene00000965; WP:CE07803 WormBase description: oxidoreductase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C01G8.4 Aff_C01G8.4 P W All gene names: dnj-4; C01G8.4; 1F850; CE26905; NM_059157; WBGene00001022; WP:CE26905 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C01G8.6 Aff_C01G8.6 P W All gene names: C01G8.6; 1F868; CE07807; WBGene00015313; WP:CE07807
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C01H6.7 Aff_C01H6.7 P W All gene names: tag-298; C01H6.7; 1H803; CE05190; WBGene00007256; WP:CE05190 WormBase description: Bromodomain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01H6.9 Aff_C01H6.9 P W All gene names: C01H6.9; 1H806; CE07824; WBGene00007258; WP:CE07824 WormBase description: C01H6.9 encodes a homolog of haploid germ cell-specific nuclear protein kinase (haspin) that specifically binds GOA-1 in yeast two-hybrid assays; C01H6.9 is expressed in PHB sensory neurons and PVT interneurons in the tail, several unidentified neurons in the head (with projections to the nose and nerve ring), and intestinal cells, with mainly nuclear localization; C01H6.9 has no obvious function or phenotype in RNAi assays, either alone or with inactivation of a close paralog (F22H10.5). WormBase CDS description: Eukaryotic protein kinase domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, Romagnolo et al 2002  Fig3b Unkown                                     

C02A12.1 Aff_C02A12.1 P W All gene names: gst-33; C02A12.1; 5D946; CE07825; NM_071567; WBGene00001781; WP:CE07825 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C02B10.1 Aff_C02B10.1 P W All gene names: C02B10.1; 4F852; CE16798; IVD; WBGene00015326; WP:CE16798 WormBase description: The C02B10.1 gene encodes an isovaleryl-CoA dehydrogenase; this function has been verified by both sequence homology and direct biochemical assay. WormBase CDS description: acyl-CoA dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C02B10.2 Aff_C02B10.2 P W All gene names: C02B10.2; 4F854; CE24776; WBGene00015327; WP:CE24776
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C02B10.4 Aff_C02B10.4 P W All gene names: C02B10.4; C02B10.4.1; C02B10.4.2; 4F857; CE16801; WBGene00015329; WP:CE16801
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C02B4.2 Aff_C02B4.2 P W All gene names: nhr-17; C02B4.2; CE02111; NM_077714; WBGene00003616; WP:CE02111; XN280 WormBase description: nhr-17 encodes a member of the superfamily of nuclear receptors, which is one of the most abundant class of transcriptional regulators; nuclear receptors have a well conserved DNA binding domain and a less conserved C-terminal ligand binding domain. WormBase CDS description: nuclear hormone receptor
C02B4.3 Aff_C02B4.3 P W All gene names: C02B4.3; CE02112; WBGene00007259; WP:CE02112; XN276
C02B8.3 Aff_C02B8.3 P W All gene names: C02B8.3; CE03892; WBGene00015322; WP:CE03892; XI757
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C02D5.3 Aff_C02D5.3 P W All gene names: C02D5.3; 3J641; CE39215; CE39216; CE39555; WBGene00015337; WP:CE39215; WP:CE39216; WP:CE39555
C02E11.1 Aff_C02E11.1 P W All gene names: C02E11.1; C02E11.1a.1; C02E11.1a.2; 5B508; CE28528; CE32040; WBGene00015344; WP:CE28528; WP:CE32040
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S8                            
                                              SAGE genes in the dauer exit, Wang et al 2003  S7 SAGE                             
                                              genes in the dataset                                                               

C02E7.6 Aff_C02E7.6 P W All gene names: C02E7.6; 5F397; CE07843; WBGene00015339; WP:CE07843
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 Climbing, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C02F12.4 Aff_C02F12.4 P W All gene names: tag-52; C02F12.4; CE03899; WBGene00006431; WP:CE03899; XE294 WormBase description: guanine-nucleotide releasing factor of the CDC24 family
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C02F12.8 Aff_C02F12.8 P W All gene names: C02F12.8; CE03902; WBGene00015357; WP:CE03902; XE310
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C02F4.1 Aff_C02F4.1 P W All gene names: ced-5; C02F4.1; 4L257; CE24779; NM_069537; WBGene00000419; WP:CE24779 WormBase description: The ced-5 gene a homolog of the human protein DOCK180 that is required for the cell engulfment stage of programmed cell death. WormBase CDS description: DOCK180 protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C02F4.2 Aff_C02F4.2 P W All gene names: cna-1; pph-3; pph2B-A; tax-6; C02F4.2; 4L258; CE07853; CE33593; PP2B; WBGene00006527; WP:CE07853; WP:CE33593 WormBase description: tax-6 encodes an ortholog of calcineurin A that is required for inhibition and adaptation of several sensory neurons and for the normal regulation of egg-laying by serotonin; TAX-6 stimulates transcription of rcn-1, and binds RCN-1 protein if free Ca[2+] is present; in general, calcineurin positively regulates calcium-dependent signaling.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster B,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S7 SAGE genes in the dataset, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit                                                    

C02F4.4 Aff_C02F4.4 P W All gene names: C02F4.4; 4L278; CE07855; WBGene00007264; WP:CE07855
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

C02F5.1 Aff_C02F5.1 P W All gene names: knl-1; C02F5.1; 3J343; CE02450; NM_066410; WBGene00002231; WP:CE02450 WormBase description: knl-1 encodes a novel acidic protein with a coiled-coil region at its C-terminus; KNL-1 is an essential kinetochore component that is required for proper spindle elongation and chromosome separation, and in the kinetochore assembly pathway, plays a key role in linking the initiation of kinetochore formation with the construction of a functional microtubule-binding interface; in the assembly pathway, KNL-1 functions downstream of the DNA-proximal kinetochore components CeCENP-A/HCP-3 and CeCENP-B/HCP-4 and upstream of the outer kinetochore components HIM-10/Nuf2p, NDC-80/HEC1, CeBUB-1, HCP-1, and CeCLASP2/CLS-2; in expression studies in the one-cell embryo, KNL-1 localizes to kinetochores throughout mitosis.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C02F5.12 Aff_C02F5.9 P W All gene names: C02F5.12; 3J330; CE39127; WBGene00015352; WP:CE39127
C02F5.13 Aff_C02F5.3 P W All gene names: C02F5.13; 3J337a; CE36093; WBGene00015353; WP:CE36093
C02F5.4 Aff_C02F5.4 P W All gene names: C02F5.4; 3J335; CE38771; WBGene00015347; WP:CE38771
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C02F5.5 Aff_C02F5.5 P W All gene names: C02F5.5; 3J325; CE00041; WBGene00015348; WP:CE00041
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm                                                                       

C02F5.6 Aff_C02F5.6 P W All gene names: C02F5.6; CE00042; CE30417; NM_171212; NM_171213; WBGene00015349; WP:CE00042; WP:CE30417
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C02F5.7 Aff_C02F5.7 P W All gene names: C02F5.7; C02F5.7a.1; C02F5.7a.2; C02F5.7a.3; C02F5.7a.4; C02F5.7b.1; C02F5.7b.2; C30A5.1; CE24780; CE30418; NM_171210; NM_171211; WBGene00015350; WP:CE24780; WP:CE30418 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

C02F5.8 Aff_C02F5.8 P W All gene names: tsp-1; C02F5.8; 3J328; CE00044; NM_066403; WBGene00006627; WP:CE00044 WormBase description: tetraspanin
C02G6.1 Aff_C02G6.1 P W All gene names: C02G6.1; 5G357; CE06755; WBGene00015359; WP:CE06755 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: peptidase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C03A3.2 Aff_C03A3.2 P W All gene names: C03A3.2; C03A3.2.1; C03A3.2.2; CE31404; WBGene00007267; WP:CE31404; XL883
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C03A7.10 Aff_C03A7.10 P W All gene names: srt-65; C03A7.10; 5F644; CE07868; NM_071986; WBGene00015368; WP:CE07868 WormBase description: 7TM chemoreceptor, srt family
C03A7.4 Aff_C03A7.4 P W All gene names: pqn-5; C03A7.4; 5F633; CE07862; NM_071981; WBGene00004099; WP:CE07862 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  T1 pqn genes                                   

C03A7.9 Aff_C03A7.9 P W All gene names: srt-64; C03A7.9; 5F642; CE37951; NM_071985; WBGene00015367; WP:CE37951 WormBase description: 7TM chemoreceptor, srt family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C03B1.12 Aff_C03B1.12 P W All gene names: lmp-1; C03B1.12; C03B1.12.1; C03B1.12.2; CE03912; NM_076671; WBGene00003053; WP:CE03912; XG996 WormBase description: lmp-1 encodes a protein with similarity to vertebrate lysosome-associated membrane proteins CD68, and appears to be the only protein in C. elegans that has a GYXX (phi) vertebrate lysosomal targeting sequence at its carboxy terminus; localized to the periphery of a large population of membrane bound organelles (granules) seen throughout the early embryos and restricted to the cells of the intestine during later stages.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C03B1.7 Aff_C03B1.7 P W All gene names: C03B1.7; CE03909; WBGene00015378; WP:CE03909; XG963
C03B8.1 Aff_C03B8.1 P W All gene names: C03B8.1; 3I805; CE39316; WBGene00015384; WP:CE39316
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, shared sperm, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

C03B8.4 Aff_C03B8.4 P W All gene names: lin-13; lin-51; C03B8.4; 3I790; CE30419; NM_066277; WBGene00003002; WP:CE30419 WormBase description: Gene Function : lin-13 encodes a large (2248-residue) nuclear protein with multiple zinc fingers of the C2H2 class and a LXCXE retinoblastoma protein-binding motif, that is required for survival through larval development and for negative regulation of vulval fates during postembryonic development. WormBase CDS description: Zinc finger
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C03C10.1 Aff_C03C10.1 P W All gene names: kin-19; C03C10.1; C03C10.1.1; C03C10.1.2; C03C10.1.3; 3F174; CE00872; NM_065417; WBGene00002202; WP:CE00872 WormBase description: kin-19 encodes a serine/threonine kinase orthologous to human casein kinase I, alpha 1 (CSNK1A1, OMIM:600505); KIN-19 appears to be a component of the non-canonical Wnt signaling pathway that regulates endoderm formation in the early embryo; kin-19(RNAi) and mom-2(RNAi) enhance apr-1(RNAi), but not RNAi of each other. WormBase CDS description: casein Kinase I
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C03C10.3 Aff_C03C10.3 P W All gene names: rnr-2; C03C10.3; C03C10.3.1; C03C10.3.2; C03C10.3.3; 3F184; CE00874; NM_065420; WBGene00004392; WP:CE00874 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Ribonuclease-diphosphate reductase M2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, GO                                  
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C03C10.4 Aff_C03C10.4 P W All gene names: C03C10.4; 3F186; CE00875; WBGene00007270; WP:CE00875
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C03C11.1 Aff_C03C11.1 P W All gene names: C03C11.1; 1K591; CE07873; WBGene00007274; WP:CE07873
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, spermatogenesis enriched genes, Reinke et al                              
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes, Reinke et al 2004, wt vs glp-4                                
                                              enriched genes, Reinke et al 2004, list of genes in                                
                                              cluster D, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C03C11.2 Aff_C03C11.2 P W All gene names: fog-3; C03C11.2; 1K593; CE07874; NM_060245; WBGene00001483; WP:CE07874 WormBase description: fog-3 encodes a protein that has similarity, in its N-terminus, to the vertebrate Tob, BTG1, and BTG2 proteins that function in growth control and/or differentiation; in C. elegans, FOG-3 activity is required in the germ line throughout development for initiation and maintenance of spermatogenesis; fog-3 mRNA is expressed at highest levels in the L3, L4, and young adult stages of development, when spermatogenesis occurs; fog-3 transcription appears to be under the control of TRA-1A, which interacts with predicted TRA-1A binding sites in the fog-3 promoter in vitro.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, Fig2b shared                              
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, intrinsic, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster D                                                                 

C03D6.3 Aff_C03D6.3 P W All gene names: cel-1; C03D6.3; 1K243; CE05197; CE32300; NM_060168; WBGene00000466; WP:CE05197; WP:CE32300 WormBase description: cel-1 encodes a mRNA capping enzyme, with a N-terminal region with RNA triphosphatase activity and a C-terminal region containing motifs found in yeast and vaccinia virus capping enzyme guanylytransferases; cel-1 is required for embryonic viability, body morphology, and vulval development.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, intrinsic, Reinke et al 2004, wt vs glp-4                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S8 SAGE genes in the dauer                             
                                              exit, Wang et al 2003  S7 SAGE genes in the dataset                                

C03D6.4 Aff_C03D6.4 P W All gene names: npp-14; C03D6.4; 1K238; CE05198; CeNup214; NM_060167; WBGene00003800; WP:CE05198 WormBase description: npp-14 is orthologous to the human gene NUCLEOPORIN, 214-KD (NUP214; OMIM:114350), which encodes part of the nucleopore complex mediating nucleocytoplasmic transport; NUP214, as a fusion gene with DEK (OMIM:125264), is found in a subset of acute myeloid leukemia. WormBase CDS description: nucleoporin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C03D6.5 Aff_C03D6.5 P W All gene names: C03D6.5; 1K235; CE36095; WBGene00007277; WP:CE36095 WormBase description: anti-silencing protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, Fig2b shared                              
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C03D6.6 Aff_C03D6.6 P W All gene names: C03D6.6; 1K232; CE15580; WBGene00007278; WP:CE15580
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, Fig2b shared gemlines,                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C03D6.8 Aff_C03D6.8 P W All gene names: rpl-24.2; C03D6.8; C03D6.8.1; C03D6.8.2; 1K245; CE05202; NM_060171; WBGene00004437; WP:CE05202 WormBase description: rpl-24.2 encodes a large ribosomal subunit L24 protein paralog; its orthologs include ribosomal protein L30 isologs from mammals and 'Ribosomal Like Protein 24' (Rlp24p) from S. cerevisiae; it therefore appears to actually represent an ancient paralogy between two varieties of eukaryotic L24 protein. WormBase CDS description: ribosomal protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Wang et al 2003  S5 genes common to feeding                               
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C03E10.3 Aff_C03E10.3 P W All gene names: C03E10.3; 5L767; CE15583; WBGene00007281; WP:CE15583
C03E10.4 Aff_C03E10.4 P W All gene names: gly-20; C03E10.4; 5L765; CE26613; GnT II; MGAT2; NM_073463; WBGene00001645; WP:CE26613 WormBase description: gly-20 is orthologous to the human gene MANNOSYL (ALPHA-1,6-)-GLYCOPROTEIN BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE (MGAT2; OMIM:602616), which when mutated leads to carbohydrate-deficient glycoprotein syndrome, type II. WormBase CDS description: UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C03E10.5 Aff_C03E10.5 P W All gene names: C03E10.5; 5L757; CE15585; WBGene00007282; WP:CE15585
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C03F11.1 Aff_C03F11.1 P W All gene names: C03F11.1; CE03913; WBGene00015387; WP:CE03913; XG9 WormBase description: noninactivating potassium channel (weak)
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S3  genes pass                                   
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

C03H12.1 Aff_ZK662.1 P W All gene names: C03H12.1; CE35380; WBGene00007284; WP:CE35380; XQ313
C03H5.2 Aff_C03H5.2 P W All gene names: C03H5.2; 2A681; CE32110; WBGene00015404; WP:CE32110
C03H5.3 Aff_C03H5.3 P W All gene names: C03H5.3; 2A677; CE07896; WBGene00015405; WP:CE07896
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C03H5.4 Aff_C03H5.4 P W All gene names: C03H5.4; 2A667; CE07897; WBGene00015406; WP:CE07897 WormBase description: phospholipase
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S3  genes pass                                   
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

C03H5.7 Aff_C03H5.7 P W All gene names: C03H5.7; 2A673; CE07900; WBGene00015409; WP:CE07900
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C04A11.2 Aff_C04A11.2 P W All gene names: C04A11.2; CE07904; WBGene00007286; WP:CE07904; XO286
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C04A11.4 Aff_C04A11.4 P W All gene names: adm-2; C04A11.4; CE07906; NM_077890; WBGene00000074; WP:CE07906; XO313 WormBase description: adm-2 encodes a protein containing a snake venom disintegrin-domain and a metalloprotease-like domain (i.e., a protein of the ADAM family); like ADM-1, ADM-2 is homologous to a mammalian sperm glycoprotein (PH-30/fertilin) implicated in sperm-egg fusion, and ADM-2 might thus be a fusogenic protein mediating the merging of plasma membranes during development. WormBase CDS description: zinc metalloprotease
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C04A2.1 Aff_C04A2.1 P W All gene names: C04A2.1; 2H139; CE36523; WBGene00015410; WP:CE36523
                                              
Member of lists (Publications lists):
                                              Shen et al 2005  T1 hif-1 depend                                  
                                              hypoxia, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C04B4.1 Aff_C04B4.1 P W All gene names: C04B4.1; CE05203; WBGene00007289; WP:CE05203; XM899
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C04B4.2 Aff_C04B4.2 P W All gene names: C04B4.2; CE05204; WBGene00007290; WP:CE05204; XM903
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C04C11.2 Aff_C04C11.2 P W All gene names: C04C11.2; C04C11.2.1; C04C11.2.2; CE05210; WBGene00007296; WP:CE05210; XO655
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

C04C3.3 Aff_C04C3.3 P W All gene names: C04C3.3; C04C3.3.1; C04C3.3.2; 4E167; CE27647; WBGene00015413; WP:CE27647 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: pyruvate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C04D8.1 Aff_C04D8.1 P W All gene names: C04D8.1; 3J607; CE33028; CEGAP; WBGene00015418; WP:CE33028 WormBase description: GTPase-activating protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C04E6.11 Aff_C04E6.11 P W All gene names: C04E6.11; 5G396; CE36911; WBGene00015425; WP:CE36911
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, herm soma enriched genes, Wang et al 2003  S4                                
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

C04E7.2 Aff_C04E7.2 P W All gene names: C04E7.2; CE28816; WBGene00015429; WP:CE28816; XA975
C04F12.1 Aff_C04F12.1 P W All gene names: C04F12.1; 1K250; CE19674; WBGene00007297; WP:CE19674
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C04F12.10 Aff_C04F12.10 P W All gene names: Ce-face-1; fce-1; C04F12.10; 1K288; CE19683; NM_060181; WBGene00001405; WP:CE19683 WormBase description: fce-1 encodes an ortholog of 'farnesylated-proteins converting enzyme 1' (FACE-1), and thus probably enables post-translational processing of proteins (such as LET-60/RAS) carrying a C-terminal CaaX motif; FCE-1 protein probably accounts for the EDTA-sensitive, tosylphenylalanylchloromethane-insensitive component of CaaX-proteolytic activity in membrane extracts from C. elegans, and FCE-1 can cleave a farnesylated peptide in vitro; the S. cerevisiae homolog of FCE-1 (Ste24p) cleaves the precursor of yeast a-factor mating pheromone after its farnesylated cysteine residue, and transgenic FCE-1 rescues a mating defect of mutant yeast lacking both the Ste24p and the Rce1p CaaX-proteases. WormBase CDS description: Zinc-binding metalloprotease domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C04F12.4 Aff_C04F12.4 P W All gene names: rpl-14; C04F12.4; C04F12.4.1; C04F12.4.2; 1K265; CE19677; NM_060175; WBGene00004426; WP:CE19677 WormBase description: rpl-14 encodes a large ribosomal subunit L14 protein.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Romagnolo et al 2002  Fig3b Protein Synthesis,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C04F12.5 Aff_C04F12.5 P W All gene names: C04F12.5; 1K264; CE19678; WBGene00007299; WP:CE19678
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, list                            
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C04F12.9 Aff_C04F12.9 P W All gene names: C04F12.9; 1K286; CE19682; WBGene00007303; WP:CE19682 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , Lund et al 2002  Fig3D Oocyte-en,                             
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, mixed oogenesis soma, Reinke et al 2004, GO                                  
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C04F5.1 Aff_C04F5.1 P W All gene names: rsd-8; sid-1; C04F5.1; 5F603; CE30331; NM_071971; WBGene00004795; WP:CE30331 WormBase description: The sid-1 gene encodes a predicted transmembrane protein with conserved human (OMIM:606816) and mouse homologs of unknown function and is required cell autonomously for systemic RNA interference (RNAi); a SID-1::GFP fusion is enriched at the cell periphery of most nonneuronal cells from late embryogenesis through adulthood with highest levels detected in cells exposed to the environment.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              F, Reinke et al 2004, fem1 enriched genes, Reinke et al                            
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, mixed oogenesis soma, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated                                                                  

C04F5.8 Aff_C04F5.8 P W All gene names: C04F5.8; 5F590; CE19672; WBGene00015450; WP:CE19672
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C04F5.9 Aff_C04F5.9 P W All gene names: C04F5.9; 5F594; CE19673; WBGene00015451; WP:CE19673
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C04F6.3 Aff_C04F6.3 P W All gene names: cht-1; C04F6.3; C04F6.3.1; C04F6.3.2; CE03923; CHT1; NM_076187; WBGene00000503; WP:CE03923; XE16 WormBase description: cht-1 encodes a chitinase orthologous to human chitinase-1 (OMIM:600031, mutations are associated with chitotriosidase deficiency); CHT-1 is predicted to function as an extracellular O-glycosyl hydrolase that hydrolyzes the glycosidic bond between two or more carbohydrates; in C. elegans, CHT-1 may play a role in embryogenesis, and may also be required for cuticle degradation during molting and degradation of chitin-containing pathogens as part of a host defense mechanism. WormBase CDS description: glycosyl hydrolase (family 18)
                                              
Member of lists (Publications lists):
                                              Bishop et al 2004  T1 Upregulated in                              
                                              vhl-1 vs WT, Jones et al 2001  Non dauer genes P<0.05,                             
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C04F6.4 Aff_C04F6.4 P W All gene names: unc-78; C04F6.4; C04F6.4b.1; C04F6.4b.2; CE03924; CE33554; NM_076189; WBGene00006810; WP:CE03924; WP:CE33554; XE28 WormBase description: The unc-78 gene encodes a homolog of actin-interacting protein 1 (AIP1) that regulates the ordered assembly of actin and cofilin in myofibrils.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Wang et al 2003  S5 genes common to feeding                              
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C04F6.5 Aff_C04F6.5 P W All gene names: dhs-27; C04F6.5; CE37079; NM_076190; WBGene00000990; WP:CE37079; XE32 WormBase description: dhs-27 encodes a short-chain dehydrogenase predicted to be mitochondrial. WormBase CDS description: alcohol/ribitol dehydrogenase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C04G2.6 Aff_C04G2.6 P W All gene names: dis-3; tag-128; C04G2.6; 4K869; CE05214; NM_069434; WBGene00001001; WP:CE05214 WormBase description: S.pombe mitotic control protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C04G2.8 Aff_C04G2.8 P W All gene names: C04G2.8; 4K876; CE05216; WBGene00007307; WP:CE05216
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C04G6.4 Aff_C04G6.4 P W All gene names: C04G6.4; 2F372; CE32112; WBGene00015454; WP:CE32112 WormBase description: salt-stress induced peptide
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C04G6.5 Aff_C04G6.5 P W All gene names: C04G6.5; 2F377; CE06766; WBGene00015455; WP:CE06766 WormBase description: salt-stress induced peptide
C04H5.6 Aff_C04H5.6 P W All gene names: mog-4; C04H5.6; 2O840; CE15592; NM_064626; WBGene00003392; WP:CE15592 WormBase description: The mog-4 gene encodes a DEAH helicase orthologous to the Drosophila CG10689 and the S. cerevisiae PRP2 proteins. WormBase CDS description: Helicases conserved C-terminal domain
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes                                      

C05A9.1 Aff_C05A9.1 P W All gene names: pgp-5; C05A9.1; CE05221; NM_077409; WBGene00003999; WP:CE05221; XL474 WormBase description: pgp-5 encodes a transmembrane protein that is a member of the P-glycoprotein subclass of the ATP-binding cassette (ABC) transporter superfamily; by homology, PGP-5 is predicted to function as an ATP-dependent efflux pump that protects C. elegans by exporting exogenous toxins; however, as loss of pgp-5 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of PGP-5 in C. elegans development and/or behavior is not yet known. WormBase CDS description: p-glycoprotein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C05B10.1 Aff_C05B10.1 P W All gene names: lip-1; C05B10.1; 4H607; CE31151; NM_068652; WBGene00003043; WP:CE31151 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

C05C10.2 Aff_C05C10.2 P W All gene names: C05C10.2; C05C10.2b.1; C05C10.2b.2; 2K219; CE01466; CE27795; WBGene00007329; WP:CE01466; WP:CE27795 WormBase description: NAM7 protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C05C10.3 Aff_C05C10.3 P W All gene names: C05C10.3; C05C10.3.1; C05C10.3.2; C05C10.3.3; 2K226; CE01467; WBGene00007330; WP:CE01467 WormBase description: C05C10.3 is orthologous to the human gene 3-OXOACID COA TRANSFERASE (also called succinyl-CoA:3-ketoacid CoA transferase; OXCT; OMIM:245050), which when mutated leads to episodic ketoacidosis. WormBase CDS description: 3-oxoacid CoA-transferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen                                                                  

C05C10.5 Aff_C05C10.5 P W All gene names: C05C10.5; C05C10.5c.1; C05C10.5c.2; C05C10.5c.3; 2K235; CE01469; CE35822; CE39217; WBGene00007332; WP:CE01469; WP:CE35822; WP:CE39217
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C05C10.6 Aff_C05C10.6 P W All gene names: C05C10.6; CE02113; CE27796; WBGene00007333; WP:CE02113; WP:CE27796 WormBase description: phospholipase activating protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen                                                       

C05C8.2 Aff_C05C8.2 P W All gene names: C05C8.2; 5H713; CE07920; WBGene00015461; WP:CE07920
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C05C8.4 Aff_C05C8.4 P W All gene names: gei-6; C05C8.4; 5H708; CE07922; NM_072435; WBGene00001563; WP:CE07922
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C05C8.5 Aff_C05C8.5 P W All gene names: C05C8.5; 5H714; CE07923; WBGene00015462; WP:CE07923
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C05C8.6 Aff_C05C8.6 P W All gene names: C05C8.6; 5H716; CE07924; WBGene00015463; WP:CE07924
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, intrinsic, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C05D10.1 Aff_C05D10.1 P W All gene names: C05D10.1; C05D10.1a.1; C05D10.1a.2; C05D10.1c.1; C05D10.1c.2; C05D10.1c.3; C05D10.1c.4; 3H173; CE24783; CE30420; CE37698; WBGene00015477; WP:CE24783; WP:CE30420; WP:CE37698
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C05D11.1 Aff_C05D11.1 P W All gene names: C05D11.1; 3H529; CE03926; WBGene00015481; WP:CE03926
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C05D11.10 Aff_C05D11.10 P W All gene names: C05D11.10; 3H520; CE01129; MRPS17; WBGene00015487; WP:CE01129
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C05D11.11 Aff_C05D11.11 P W All gene names: mel-32; C05D11.11; C05D11.11a.1; C05D11.11a.2; C05D11.11a.3; C05D11.11b.1; C05D11.11b.2; 3H530; CE01130; CE29661; NM_171169; NM_171170; WBGene00003214; WP:CE01130; WP:CE29661
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C05D11.12 Aff_C05D11.12 P W All gene names: let-721; C05D11.12; C05D11.12.1; C05D11.12.2; 3H534; CE29662; NM_066014; WBGene00002855; WP:CE29662 WormBase description: The let-721 gene encodes an ortholog of the human gene SIMILAR TO ELECTRON-TRANSFERRING-FLAVOPROTEIN DEHYDROGENASE (ETFDH), which when mutated leads to glutaricaciduria type IIC (OMIM:231675). WormBase CDS description: YAAS
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b Oxidation,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C05D11.2 Aff_C05D11.2 P W All gene names: tag-171; vps-16; C05D11.2; C05D11.2.1; C05D11.2.2; 3H525; CE24785; WBGene00006516; WP:CE24785
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, ViswanathanM et al 2005  S2                               
                                              sir-2.1 regulated, Zhang et al 2002, T1 mec-3 dependent                            
                                              genes                                                                              

C05D11.3 Aff_C05D11.3 P W All gene names: tag-170; C05D11.3; 3H521; CE01133; WBGene00006515; WBGene00015482; WP:CE01133
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C05D11.9 Aff_C05D11.9 P W All gene names: C05D11.9; 3H518; CE24787; WBGene00015486; WP:CE24787
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Romagnolo et                             
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C05D12.2 Aff_C05D12.2 P W All gene names: C05D12.2; 2L713; CE32301; WBGene00007340; WP:CE32301 WormBase description: EGF domains
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C05D2.1 Aff_C05D2.1 P W All gene names: daf-4; C05D2.1; 3G721; CE16827; CE32114; CE33555; NM_065810; WBGene00000900; WP:CE16827; WP:CE32114; WP:CE33555 WormBase description: daf-4 encodes a transmembrane serine/threonine kinase that is the sole C. elegans ortholog of the type II transforming growth factor-beta (TGF-b) receptors; DAF-4 activity is required for several biological processes, including entry into and exit from the dauer larval stage, body size determination, male tail patterning, egg laying, chemosensory neuron specification, and increased thermotolerance; in regulating dauer larval development, DAF-4 acts in parallel with the insulin signaling pathway and likely partners with the DAF-1 type I TGF-b receptor to receive a signal from the DAF-7 TGF-b ligand; in body size determination and male tail patterning, DAF-4 likely partners with the SMA-6 type I receptor and responds to signals from the DBL-1 ligand; DAF-4 expression begins in late embryogenesis and continues through larval and adult stages; consistent with its role in many developmental processes, DAF-4 localizes to the plasma membrane of several tissues including head and tail neurons, the pharynx, intestine, ventral nerve cord, tail hypodermis, and body wall muscle.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C05D2.10 Aff_C05D2.6 P W All gene names: C05D2.10; C05D2.10a.1; C05D2.10a.2; 3G688; CE26861; CE29560; WBGene00015470; WP:CE26861; WP:CE29560
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C05D2.5 Aff_C05D2.5 P W All gene names: gak-1; C05D2.5; 3G695; CE26863; NM_065806; WBGene00001514; WP:CE26863 WormBase description: gak-1 encodes a protein that contains an AT hook motif, a DNA-binding domain that shows a preference for binding stretches of A/T base pairs; GAK-1 appears to play a role in meiotic chromosome segregation, as overexpression results in post-prophase I chromosome segregation abnormalities, and a corresponding increase in embryonic lethality and the proportion of genotypically XO males in an otherwise self-fertile, XX hermaphrodite population; loss of gak-1 function via RNA-mediated interference (RNAi) results in sterility in the injected hermaphrodites, suggesting a possible role in germline development as well; gak-1 expression is enhanced in the germline, although its precise subcellular localization has not been reported.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C05D9.1 Aff_C05D9.1 P W All gene names: snx-1; C05D9.1; C05D9.1.1; C05D9.1.2; C05D9.1.3; CE07927; NM_075815; SNX1; WBGene00004927; WP:CE07927; XB751
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C05D9.2 Aff_C05D9.2 P W All gene names: lmp-2; C05D9.2; CE07928; WBGene00015471; WP:CE07928; XB745
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C05D9.5 Aff_C05D9.5 P W All gene names: ife-4; C05D9.5; CE07931; NM_075809; WBGene00002062; WP:CE07931; XB723 WormBase description: The ife-4 gene encodes a member of the Initiation Factor 4E (eIF4E) family. WormBase CDS description: initiation factor 4E (EIF-4E)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C05D9.7 Aff_C05D9.7 P W All gene names: C05D9.7; CE07933; WBGene00015474; WP:CE07933; XB736
C05E11.1 Aff_C05E11.1 P W All gene names: C05E11.1; CE29561; WBGene00015492; WP:CE29561; XF209
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

C05E11.3 Aff_C05E11.3 P W All gene names: C05E11.3; CE33029; WBGene00015494; WP:CE33029; XF199
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C05G5.2 Aff_C05G5.2 P W All gene names: C05G5.2; CE05225; WBGene00007348; WP:CE05225; XP367
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C05G5.4 Aff_C05G5.4 P W All gene names: C05G5.4; CE05227; WBGene00007350; WP:CE05227; XP373 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: succinyl-CoA synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

C06A1.1 Aff_C06A1.1 P W All gene names: cdc-48.1; phi-31; C06A1.1; 2K850; CE02114; NM_063872; WBGene00007352; WP:CE02114 WormBase description: transitional endoplasmic reticulum ATPase homolog 1 (P97 protein)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C06A1.5 Aff_C06A1.5 P W All gene names: C06A1.5; 2K871; CE02117; WBGene00007355; WP:CE02117 WormBase description: DNA directed RNA polymerase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C06A5.10 Aff_C06A5.10 P W All gene names: C06A5.10; CE07957; WBGene00015506; WP:CE07957
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C06A5.11 Aff_C06A5.3 P W All gene names: sir-2.4; C06A5.11; 1G567; CE27656; NM_059332; WBGene00004803; WP:CE27656
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C06A5.2 Aff_C06A5.2 P W All gene names: C06A5.2; 1G583; CE07949; WBGene00015500; WP:CE07949
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, shared sperm                                                    

C06A5.5 Aff_C06A5.5 P W All gene names: C06A5.5; 1G558; CE07952; WBGene00015503; WP:CE07952 WormBase description: RNA-binding protein
C06A5.6 Aff_C06A5.6 P W All gene names: C06A5.6; 1G560; CE07953; WBGene00015504; WP:CE07953
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, Fig2b shared                                   
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 daf-16                             
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C06A5.7 Aff_C06A5.7 P W All gene names: tmd-1; C06A5.7; 1G570; CE29023; CE29024; NM_059333; NM_059334; WBGene00006581; WP:CE29023; WP:CE29024 WormBase description: tmd-1 encodes a predicted member of the tropomodulin family and affects egg laying, locomotion, and muscle organization in one analysis using RNAi.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C06A5.8 Aff_C06A5.8 P W All gene names: C06A5.8; 1G584; CE07955; CE33360; WBGene00015505; WP:CE07955; WP:CE33360
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, intrinsic, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C06A5.9 Aff_C06A5.9 P W All gene names: rnf-1; tag-54; C06A5.9; 1G586; CE34249; NM_059337; WBGene00004380; WP:CE34249
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S6 removed                            
                                              genes of contamination                                                             

C06A6.2 Aff_C06A6.1 P W All gene names: C06A6.2; 4I617; CE31152; CE31153; WBGene00015507; WP:CE31152; WP:CE31153
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma                                     

C06A6.3 Aff_C06A6.3 P W All gene names: C06A6.3; 4I599; CE03941; WBGene00015508; WP:CE03941
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C06A6.4 Aff_C06A6.4 P W All gene names: C06A6.4; 4I592; CE35224; CE37607; WBGene00015509; WP:CE35224; WP:CE37607 WormBase description: aminoacylase-1
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C06A6.5 Aff_C06A6.5 P W All gene names: C06A6.5; 4I598; CE27661; WBGene00015510; WP:CE27661
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C06A8.1 Aff_C06A8.1 P W All gene names: C06A8.1; C06A8.1a.1; C06A8.1a.2; 2I64; CE30593; CE31291; WBGene00015512; WP:CE30593; WP:CE31291 WormBase description: C06A8.1 is orthologous to human MSH HOMEO BOX HOMOLOG 1 (MTHFR; OMIM:142983, mutated in homocystinuria).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C06A8.2 Aff_C06A8.2 P W All gene names: C06A8.2; 2I70; CE31292; WBGene00015513; WP:CE31292
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C06A8.3 Aff_C06A8.3 P W All gene names: C06A8.3; 2I81; CE02454; WBGene00015514; WP:CE02454 WormBase description: 17k antigen (O. volvulus)
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 Early genes, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Zhang et al 2002, T1                                
                                              mec-3 dependent genes                                                              

C06A8.4 Aff_C06A8.4 P W All gene names: skr-17; C06A8.4; 2I75; CE02455; NM_063237; WBGene00004823; WP:CE02455 WormBase description: skr-17 encodes a homolog of Skp1 in S. cerevisiae, a core component of the SCF (Skp1p, Cullin, F-box) ubiquitin-ligase complex that facilitates ubiquitin-mediated protein degradation; SKR-17 has no known function in vivo, since skr-17(RNAi) animals are at least superficially normal, and SKR-17 does not appear to interact in vitro with any of the C. elegans cullin homologs.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C06A8.5 Aff_C06A8.5 P W All gene names: C06A8.5; 2I73; CE02456; WBGene00015515; WP:CE02456
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C06A8.6 Aff_C06A8.6 P W All gene names: C06A8.6; 2I63; CE02457; WBGene00015516; WP:CE02457
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, spermatogenesis                               
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol                                                                        

C06B3.4 Aff_C06B3.4 P W All gene names: dod-8; stdh-1; C06B3.4; 5O389; CE07961; NM_074048; WBGene00007363; WP:CE07961 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: estradiol 17 beta-dehydrogenase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C06B3.6 Aff_C06B3.6 P W All gene names: C06B3.6; 5O390; CE07963; WBGene00007365; WP:CE07963
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C06C6.7 Aff_C06C6.7 P W All gene names: C06C6.7; 5Q469; CE15601; WBGene00007381; WP:CE15601
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, fem3                                   
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

C06E1.1 Aff_C06E1.1 P W All gene names: C06E1.1; 3J695; CE00054; WBGene00015518; WP:CE00054
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C06E1.9 Aff_C06E1.9 P W All gene names: C06E1.9; 3J696; CE24790; WBGene00015524; WP:CE24790
C06E2.5 Aff_C06E2.5 P W All gene names: C06E2.5; C06E2.5.1; C06E2.5.2; CE30595; WBGene00015529; WP:CE30595; XJ476
C06E7.1 Aff_C06E7.1 P W All gene names: C06E7.1; 4G615; CE03957; CE32569; CE33515; CE37186; WBGene00015538; WP:CE03957; WP:CE32569; WP:CE33515; WP:CE37186 WormBase description: S-adenosylmethionine synthetase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S4                                 
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

C06E7.3 Aff_C06E7.3 P W All gene names: C06E7.3; C06E7.3b.1; C06E7.3b.2; C06E7.3b.3; C06E7.3b.4; 4G610; CE03959; CE33517; WBGene00015540; WP:CE03959; WP:CE33517 WormBase description: S-adenosylmethionine synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C06E7.4 Aff_C06E7.4 P W All gene names: C06E7.4; 4G616; CE29026; WBGene00015541; WP:CE29026
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C06E8.3 Aff_C06E8.2 P W All gene names: prk-1; C06E8.3; 3I91; CE29027; CE29028; CE30484; NM_066126; NM_066127; NM_171179; WBGene00004182; WP:CE29027; WP:CE29028; WP:CE30484 WormBase description: Protein kinase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C06G1.4 Aff_C06G1.4 P W All gene names: ain-1; C06G1.4; C06G1.4.1; C06G1.4.2; CE03967; WBGene00015547; WP:CE03967; XR231
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C06G3.1 Aff_C06G3.1 P W All gene names: nhr-105; C06G3.1; C06G3.1a.1; C06G3.1a.2; 4H817; CE34659; CE37188; WBGene00003695; WP:CE34659; WP:CE37188 WormBase description: zinc finger protein
C06G3.10 Aff_C06G3.10 P W All gene names: cgo-2; cogc-2; C06G3.10; 4H802; CE28817; CELDLC; NM_068691; WBGene00000585; WP:CE28817; cog2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C06G3.11 Aff_C06G3.11 P W All gene names: tin-9.1; C06G3.11; C06G3.11b.1; C06G3.11b.2; 4H808; CE07987; CE33518; WBGene00006572; WP:CE07987; WP:CE33518; tim9a; tim9b WormBase description: tin-9 encodes a member of the Tim10/DDP family of zinc finger proteins, a family of proteins typically involved in mitochondrial protein import, and localized to the mitochondrial intermembrane space.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C06G3.5 Aff_C06G3.5 P W All gene names: C06G3.5; C06G3.5b.1; C06G3.5b.2; 4H791; CE07981; CE26867; WBGene00015551; WP:CE07981; WP:CE26867 WormBase description: C06G3.5 is orthologous to human ADENOSINE DEAMINASE (ADA; OMIM:102700), which when mutated leads to severe combined immunodeficiency.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S8 SAGE genes in the dauer exit                                           

C06G3.6 Aff_C06G3.6 P W All gene names: C06G3.6; 4H783; CE07982; WBGene00015552; WP:CE07982 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C06G3.8 Aff_C06G3.8 P W All gene names: C06G3.8; 4H796; CE07984; WBGene00015554; WP:CE07984
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C06G3.9 Aff_C06G3.9 P W All gene names: C06G3.9; C06G3.9.1; C06G3.9.2; 4H798; CE07985; WBGene00015555; WP:CE07985
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen                                                                  

C06G4.1 Aff_C06G4.1 P W All gene names: C06G4.1; 3J79; CE28203; WBGene00015557; WP:CE28203 WormBase description: possible RNA binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E                                                   

C06G4.4 Aff_C06G4.4 P W All gene names: C06G4.4; 3J64; CE00549; WBGene00015558; WP:CE00549
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S3                                 
                                              genes pass one-way ANOVA, Wang et al 2003  S4 Dauer                                
                                              Enriched, Wang et al 2003  S4 genes pass two-wayANOVA                              
                                              P0                                                                                 

C06G8.4 Aff_C06G8.4 P W All gene names: srd-7; C06G8.4; 4L550; CE05232; NM_069600; WBGene00005085; WP:CE05232 WormBase description: 7TM chemoreceptor (srd-family)
C06H2.1 Aff_C06H2.1 P W All gene names: atp-5; phi-39; C06H2.1; C06H2.1.1; C06H2.1.2; 5L602; CE15602; WBGene00007385; WP:CE15602 WormBase description: ATP synthase D chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

C06H2.2 Aff_C06H2.2 P W All gene names: C06H2.2; 5L607; CE36098; WBGene00007386; WP:CE36098 WormBase description: phosphatidylcholine transfer protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

C06H2.3 Aff_C06H2.3 P W All gene names: C06H2.3; 5L609; CE05235; WBGene00007387; WP:CE05235 WormBase description: Acetyltransferase (GNAT) family
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, Wang et al 2003  S5 genes common to                                   
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C07A12.3 Aff_C07A12.3 P W All gene names: nhr-35; C07A12.3; CE30855; CE38483; NM_076378; WBGene00003628; WP:CE30855; WP:CE38483; XF155 WormBase description: zinc finger protein
C07A12.4 Aff_C07A12.4 P W All gene names: pdi-2; C07A12.4; C07A12.4a.1; C07A12.4a.2; CE03972; CE31878; NM_076377; NM_182439; WBGene00003963; WP:CE03972; WP:CE31878; XF145 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Link et al 2003  T2 Abeta repressed,                             
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster C, Roy et                              
                                              al 2002  S3 muscle genes, ViswanathanM et al 2005  S2                              
                                              UPR genes, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C07A12.7 Aff_C07A12.7 P W All gene names: C07A12.7; C07A12.7a.1; C07A12.7a.2; C07A12.7c.1; C07A12.7c.2; CE25764; CE27055; CE33557; WBGene00015561; WP:CE25764; WP:CE27055; WP:CE33557; XF138
C07A9.2 Aff_C07A9.2 P W All gene names: C07A9.2; C07A9.2.1; C07A9.2.2; 3J784; 3K784; CE00499; WBGene00007400; WP:CE00499 WormBase description: G10 protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories                                                                         

C07A9.3 Aff_C07A9.3 P W All gene names: tlk-1; C07A9.3; 3K799; CE36353; CE36354; CE39220; NM_066744; NM_181913; WBGene00006579; WP:CE36353; WP:CE36354; WP:CE39220 WormBase description: tlk-1 encodes, through alternative splicing, two isoforms of a Tousled-class serine/threonine protein kinase; TLK-1A/B are orthologous to Tousled from A. thaliana; tlk-1(RNAi) embryos have, compared to normal embryos, reduced phosphorylation of the RNA polymerase II C-terminal domain at Serine-2 and methylation of histone H3 at Lysine-36 (posttranslational modifications associated with transcriptional elongation), along with a lethal phenotype consistent with general defects in zygotic transcription; TLK-1A/B have a glutamine/asparagine-rich domain and a putative coil domain.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C07A9.7 Aff_C07A9.7 P W All gene names: C07A9.7; 3K782; CE00498; CE31769; WBGene00007403; WP:CE00498; WP:CE31769
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C07D10.2 Aff_C07D10.2 P W All gene names: bath-44; C07D10.2; C07D10.2b.1; C07D10.2b.2; 2H687; CE27057; CE29072; WBGene00015567; WP:CE27057; WP:CE29072 WormBase description: The C07D10.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E, Shen et al 2005  T1                              
                                              hif-1indepen hypoxia, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C07D10.5 Aff_C07D10.5 P W All gene names: C07D10.5; 2H673; CE36628; WBGene00015569; WP:CE36628
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, herm soma enriched genes,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C07D8.6 Aff_C07D8.6 P W All gene names: C07D8.6; C07D8.6.1; C07D8.6.2; CE06776; WBGene00015565; WP:CE06776; XH961 WormBase description: aldehyde reductase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, mixed oogenesis soma, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

C07E3.1 Aff_C07E3.1 P W All gene names: C07E3.1; 2K638; CE02118; CE23526; WBGene00007412; WP:CE02118; WP:CE23526
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C07E3.10 Aff_C07E3.10 P W All gene names: C07E3.10; 2K637; CE15607; WBGene00007420; WP:CE15607
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C07E3.2 Aff_C07E3.2 P W All gene names: C07E3.2; C07E3.2.1; C07E3.2.2; 2K630; CE15606; WBGene00007413; WP:CE15606
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, Wang et al 2003  S5 genes common                             
                                              to feeding ANOVA, Wang et al 2003  S3  genes pass                                  
                                              one-way ANOVA                                                                      

C07E3.6 Aff_C07E3.6, Aff_C07E3.7 P W All gene names: C07E3.6; 2K660; CE35825; WBGene00007417; WP:CE35825
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C07E3.9 Aff_C07E3.9 P W All gene names: C07E3.9; 2K641; CE02124; WBGene00007419; WP:CE02124 WormBase description: phospholipase A2
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order                                                                      

C07G1.3 Aff_C07G1.3 P W All gene names: pct-1; C07G1.3; C07G1.3a.1; C07G1.3a.2; 4I953; CE06779; CE29073; CE32571; NM_068971; WBGene00003961; WP:CE06779; WP:CE29073; WP:CE32571; pct WormBase description: ser/thr protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C07G1.4 Aff_C07G1.4 P W All gene names: wsp-1; C07G1.4; 4I954; CE32572; CE32573; NM_171393; NM_171394; WBGene00006957; WP:CE32572; WP:CE32573 WormBase description: wsp-1 encodes a homolog of human WASP that interacts with Arp2/3 and is required for hypodermal cell migration during morphogenesis (ventral enclosure); when mutated, human WASP leads to Wiskott-Aldrich syndrome (OMIM:301000).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

C07G1.5 Aff_C07G1.5 P W All gene names: hgrs-1; pqn-9; C07G1.5; 4I966; CE32574; NM_068974; WBGene00004101; WP:CE32574 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C07G2.1 Aff_C07G2.1 P W All gene names: cej-1; C07G2.1; C07G2.1a.1; C07G2.1a.2; 3F579; CE00665; CE33971; WBGene00000465; WP:CE00665; WP:CE33971 WormBase description: cej-1 encodes a protein with a chitin binding peritrophin-A domain that is required, in conjunction with B0280.5, for early embryonic development; cej-1 mRNA is expressed specifically in the adult hermaphrodite germ line, is a direct target of GLD-1, and has an RNAi phenotype consistent with the hypothesis that CEJ-1 is an effector of GLD-1 in the germline.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C07G2.3 Aff_C07G2.3 P W All gene names: cct-5; C07G2.3; C07G2.3b.1; C07G2.3b.2; C07G2.3b.3; C07G2.3b.4; C07G2.3b.5; C07G2.3b.6; C07G2.3b.7; 3F590; CE02985; CE29569; NM_065514; WBGene00000380; WP:CE02985; WP:CE29569 WormBase description: A homolog of the mouse chaperonin Ccte that affects protein folding; it is expressed at all life stages.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C07G3.9 Aff_C07G3.9 P W All gene names: ugt-64; C07G3.9; 5D982; CE08000; WBGene00015577; WP:CE08000 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, mixed oogenesis soma, Reinke et al 2004, GO                               
                                              categories                                                                         

C07H4.2 Aff_C07H4.2 P W All gene names: clh-5; C07H4.2; C07H4.2.1; C07H4.2.2; 2J386; CE27360; NM_063539; WBGene00000532; WP:CE27360 WormBase description: The clh-5 gene encodes a chloride channel, whose human homologs include CLC1 and CLCN5; the latter homolog is imvolved in receptor-mediated endocytosis. WormBase CDS description: chloride channel protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

C07H6.1 Aff_C07H6.1 P W All gene names: lig-4; C07H6.1; 3I613; CE34522; NM_066252; WBGene00002986; WP:CE34522
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

C07H6.2 Aff_C07H6.2 P W All gene names: C07H6.2; 3I609; CE00756; WBGene00015579; WP:CE00756
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C07H6.4 Aff_C07H6.4 P W All gene names: C07H6.4; 3I591; CE00755; WBGene00015581; WP:CE00755 WormBase description: Probable RNA binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C07H6.5 Aff_C07H6.5 P W All gene names: cgh-1; C07H6.5; C07H6.5.1; C07H6.5.2; 3I586; CE00839; NM_066245; WBGene00000479; WP:CE00839 WormBase description: The ortholog of a RNA helicase ste13/ME31B/RCK/p54 that is required for oocyte and sperm function and the prevention of physiological germline-associated apoptosis; it is expressed in the early embryo and germline and localizes to P granules. WormBase CDS description: ATP-dependent RNA helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              F, Reinke et al 2004, fem1 enriched genes, Reinke et al                            
                                              2004, Fig2b shared gemlines, Reinke et al 2004, list of                            
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt males vs glp4 male                                    
                                              enriched , Reinke et al 2004, wt herm vs wt male                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C07H6.6 Aff_C07H6.6 P W All gene names: clk-2; rad-5; C07H6.6; 3I606; CE30240; NM_066249; WBGene00000537; WP:CE30240 WormBase description: The clk-2 gene encodes an ortholog of the S. cerevisiae telomere length-regulating protein Tel2p that has been shown to bind a number of DNA structures in vitro, including single-, double- and four-stranded DNA; in C. elegans, CLK-2 activity is required for the DNA damage and S phase replication checkpoints, for embryonic development, and for normal biological rhythms and life span; a functional CLK-2::GFP fusion protein is detected exclusively in the cytoplasm of somatic tissues.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05                                                                             

C08A9.6 Aff_C08A9.6 P W All gene names: C08A9.6; CE06788; WBGene00015586; WP:CE06788; XR708
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C08A9.7 Aff_C08A9.7 P W All gene names: sdz-2; C08A9.7; CE06789; WBGene00015587; WP:CE06789; XR714
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C08A9.9 Aff_C08A9.9 P W All gene names: C08A9.9; CE06791; WBGene00015589; WP:CE06791; XR718
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C08B11.1 Aff_C08B11.1 P W All gene names: zyg-11; C08B11.1; 2I309; CE01471; NM_063276; WBGene00006996; WP:CE01471 WormBase description: Leucine Rich Repeat (2 copies)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C08B11.2 Aff_C08B11.2 P W All gene names: hda-2; C08B11.2; 2I312; CE01472; NM_063277; WBGene00001835; WP:CE01472 WormBase description: transcriptional regulatory protein (RPD3)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

C08B11.6 Aff_C08B11.6 P W All gene names: C08B11.6; C08B11.6.1; C08B11.6.2; CE30856; WBGene00007434; WP:CE30856 WormBase description: actin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C08B11.7 Aff_C08B11.7 P W All gene names: ubh-4; C08B11.7; 2I328; CE36913; NM_063283; WBGene00006724; WP:CE36913 WormBase description: thiolesterase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C08B11.8 Aff_C08B11.8 P W All gene names: C08B11.8; 2I333; CE01478; WBGene00007435; WP:CE01478
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, Wang et al 2003  S4 Early genes,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

C08B11.9 Aff_C08B11.9 P W All gene names: C08B11.9; CE01479; WBGene00007436; WP:CE01479
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

C08B6.7 Aff_C08B6.7 P W All gene names: C08B6.7; 5K612; CE05244; WBGene00007428; WP:CE05244 WormBase description: 59 protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C08B6.8 Aff_C08B6.8 P W All gene names: C08B6.8; 5K621; CE05245; WBGene00007429; WP:CE05245 WormBase description: YJER protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C08B6.9 Aff_C08B6.9 P W All gene names: aos-1; C08B6.9; 5K608; CE05246; NM_073203; WBGene00000142; WP:CE05246 WormBase description: aos-1 encodes the C. elegans ortholog of Saccharomyces cerevisiae Aos1p and human SUMO-1 activating enzyme E1 N subunit; by homology, AOS-1 is predicted to form, with a catalytic subunit, UBA-2, a heterodimeric enzyme that activates the ubiquitin-like protein SMO-1/SUMO in preparation for its covalent attachment to target proteins to regulate their subcellular localization and/or stability; in C. elegans, AOS-1 is required for embryonic and larval development, as well as for proper Hox gene regulation; uba-2/aos-1(RNAi) animals that survive embryogenesis show ectopic expression of EGL-5 and ectopic anterior sensory ray formation. WormBase CDS description: ubiquitin activating enzyme
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C08C3.2 Aff_C08C3.2 P W All gene names: bath-15; C08C3.2; 3I864; CE39087; WBGene00015590; WP:CE39087
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C08C3.4 Aff_C08C3.4 P W All gene names: C08C3.4; 3I884; CE00069; CE39671; WBGene00015591; WP:CE00069; WP:CE39671
C08E3.2 Aff_C08E3.2 P W All gene names: C08E3.2; 2B905; CE08005; WBGene00015594; WP:CE08005
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen                                                                       

C08F11.10 Aff_C08F11.10 P W All gene names: C08F11.10; 4O412; CE17387; WBGene00007457; WP:CE17387
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C08F8.1 Aff_C08F8.1 P W All gene names: C08F8.1; 4L915; CE05248; WBGene00007443; WP:CE05248
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C08F8.2 Aff_C08F8.2 P W All gene names: C08F8.2; C08F8.2b.1; C08F8.2b.2; 4L917; CE05249; CE19689; WBGene00007444; WP:CE05249; WP:CE19689 WormBase description: ATP-dependent RNA helicase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories                                                                         

C08F8.3 Aff_C08F8.3 P W All gene names: C08F8.3; 4L921; CE30596; WBGene00007445; WP:CE30596
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C08H9.2 Aff_C08H9.2 P W All gene names: C08H9.2; 2K178; CE23530; WBGene00007463; WP:CE23530 WormBase description: high-density lipoprotein-binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

C08H9.3 Aff_C08H9.3 P W All gene names: C08H9.3; 2K174; CE36914; CE37608; WBGene00007464; WP:CE36914; WP:CE37608 WormBase description: glucosyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

C09B7.2 Aff_C09B7.2 P W All gene names: C09B7.2; CE08027; WBGene00015621; WP:CE08027; XD289 WormBase description: transposase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C09B8.5 Aff_C09B8.5 P W All gene names: C09B8.5; CE02465; WBGene00015624; WP:CE02465; XG640
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Romagnolo                             
                                              et al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

C09B8.6 Aff_C09B8.6 P W All gene names: hsp-25; C09B8.6; C09B8.6c.1; C09B8.6c.2; C09B8.6c.3; C09B8.6c.4; CE02466; CE33558; CE37953; WBGene00002023; WP:CE02466; WP:CE33558; WP:CE37953; XG654 WormBase description: Small heat shock protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C09B8.7 Aff_C09B8.7