Gene list file name: | Baugh2003_classETmax_41min.txt |
---|---|
Type of gene identifier: | Affymetrix custom chip |
Description: | Baugh et al 2005, Supplymental Dataset, subclass ETmax_41min |
Organism: | Caenorhabditis elegans (nematode) |
Gene list type: | Experimental |
Gene name Source Gene ID Annotation Date Added by
AFF_C09G5.8 Aff_C09G5.8 P W
AFF_K02B12.5 Aff_K02B12.5 P W
B0261.2 Aff_B0261.2 P W All gene names: CE-TOR; let-363; B0261.2; 1F831; CE32559; CE32560; CeTor; NM_059148; NM_059151; WBGene00002583; WP:CE32559; WP:CE32560 WormBase description: let-363 encodes, by alternative splicing, two large (>2600-residue) proteins with C-terminal similarity to phosphatidylinositol kinase (PIK); LET-363 proteins are orthologous to S. cerevisiae Tor1p and Tor2p and human FRAP1 (OMIM:601231, mammalian target of FKBP12-rapamycin); LET-363 proteins are required for progression through the L3 stage of larval development and are thought to generally stimulate translation of most or all mRNAs ('global translation'); LET-363 activity is also necessary for normal development and physiology of the intestine; LET-363 proteins are expressed ubiquitously, including a maternal contribution to the early embryo.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph
B0334.8 Aff_B0334.8 P W All gene names: age-1; daf-23; B0334.8; 2L810; CE23506; NM_064061; WBGene00000090; WP:CE23506 WormBase description: age-1 encodes the C. elegans ortholog of the phosphoinositide 3-kinase (PI3K) p110 catalytic subunit; AGE-1, supplied maternally and embryonically, is a central component of the C. elegans insulin-like signaling pathway, lying downstream of the DAF-2/insulin receptor and upstream of both the PDK-1 and AKT-1/AKT-2 kinases and the DAF-16 forkhead type transcription factor, whose negative regulation is the key output of the insulin signaling pathway; in accordance with its role in insulin signaling, AGE-1 activity is required for regulation of metabolism, life span, dauer formation, stress resistance, fertility, and embryonic development; although the age-1 expression pattern has not yet been reported, ectopic expression studies indicate that pan-neuronal age-1 expression is sufficient to rescue life-span defects, while neuronal, intestinal, or muscle expression can partially rescue dauer formation, and neuronal or muscle expression can rescue metabolic defects. WormBase CDS description: phosphatidylinositol 3-kinase
Member of lists (Publications lists):
Jones et al 2001 T2 lifespan and Dauer, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster F, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, oogenesis enriched genes, Reinke et al 2004, wt vs glp-4 enriched genes, ViswanathanM et al 2005 S2 sir-2.1 regulated
B0416.4 Aff_B0416.4 P W All gene names: B0416.4; CE02434; WBGene00015180; WP:CE02434; XJ899
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, list of genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1 regulated
C07H6.5 Aff_C07H6.5 P W All gene names: cgh-1; C07H6.5; C07H6.5.1; C07H6.5.2; 3I586; CE00839; NM_066245; WBGene00000479; WP:CE00839 WormBase description: The ortholog of a RNA helicase ste13/ME31B/RCK/p54 that is required for oocyte and sperm function and the prevention of physiological germline-associated apoptosis; it is expressed in the early embryo and germline and localizes to P granules. WormBase CDS description: ATP-dependent RNA helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Murphy et al 2003 Fig2 Class2 shorten lifespan, Reinke et al 2004, list of genes in cluster F, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, Fig2b shared gemlines, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, oogenesis enriched genes, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt males vs glp4 male enriched , Reinke et al 2004, wt herm vs wt male enriched gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
C16C10.10 Aff_C16C10.10 P W All gene names: tag-73; C16C10.10; 3F243; CE01490; WBGene00006448; WP:CE01490 WormBase description: Glyoxalase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C17C3.7 Aff_C17C3.7 P W All gene names: hlh-25; C17C3.7; 2F825; CE04027; NM_062662; WBGene00001964; WP:CE04027
C18D4.6 Aff_C18D4.6 P W All gene names: C18D4.6; 5S16; CE32310; CE32311; CE36469; WBGene00007675; WP:CE32310; WP:CE32311; WP:CE36469
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, mixed oogenesis soma, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C34C12.4 Aff_C34C12.4 P W All gene names: C34C12.4; C34C12.4.1; C34C12.4.2; 3E558; CE31434; WBGene00007923; WP:CE31434
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed sperm soma, Reinke et al 2004, list of genes in cluster D, Reinke et al 2004, fem3 enriched genes
C35D6.4 Aff_C35D6.4 P W All gene names: C35D6.4; 4R103; CE15683; WBGene00007961; WP:CE15683 WormBase description: Zinc finger C-x8-C-x5-C-x3-H type (and similar). (2 domains)
Member of lists (Publications lists):
Lund et al 2002 Fig3D Oocyte-en, ViswanathanM et al 2005 S2 sir-2.1 regulated
C41G7.1 Aff_C41G7.1 P W All gene names: smn-1; C41G7.1; 1K88; CE08665; CE27843; CESMN; NM_060124; SMN; WBGene00004887; WP:CE08665; WP:CE27843 WormBase description: smn-1 encodes a homolog of human SMN, which when mutated leads to spinal muscular atrophy (OMIM:253300). WormBase CDS description: Human muscular atrophy protein like
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt herm vs wt male enriched gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
C41H7.3 Aff_C41H7.3 P W All gene names: C41H7.3; 2D297; CE08674; WBGene00016573; WP:CE08674
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1 regulated
C44E4.6 Aff_C44E4.6 P W All gene names: acbp-1; C44E4.6; C44E4.6.1; C44E4.6.2; C44E4.6.3; C44E4.6.4; 1F204; CE08720; NM_059011; WBGene00016655; WP:CE08720 WormBase description: acyl-CoA-binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
C46F11.2 Aff_C46F11.2 P W All gene names: C46F11.2; C46F11.2b.1; C46F11.2b.2; 3E741; CE08773; CE17558; WBGene00008117; WP:CE08773; WP:CE17558 WormBase description: C46F11.2 is orthologous to human MITOCHONDRIAL GLUTATHIONE REDUCTASE (GSR; OMIM:138300); GSR deficiency has been associated with hemolytic anemia.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, mixed oogenesis soma, Reinke et al 2004, GO categories, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Climbing, Wang et al 2003 S4 genes pass two-wayANOVA P0
C49C3.7 Aff_C49C3.7 P W All gene names: C49C3.7; 4S277; CE19746; WBGene00008197; WP:CE19746
Member of lists (Publications lists):
Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, oogenesis enriched genes, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, list of genes in cluster E
F10G8.3 Aff_F10G8.3 P W All gene names: npp-17; F10G8.3; F10G8.3.1; F10G8.3.2; 1K605; CE09338; CeRAE1; NM_060249; WBGene00003803; WP:CE09338 WormBase description: polyA RNA export protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, ViswanathanM et al 2005 S2 sir-2.1 regulated
F10G8.9 Aff_F10G8.9 P W All gene names: F10G8.9; 1K625; CE09344; CE30752; WBGene00008667; WP:CE09344; WP:CE30752 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial.
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt male enriched gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
F21F3.6 Aff_F21F3.6 P W All gene names: F21F3.6; F21F3.6.1; F21F3.6.2; 1F480; CE09536; WBGene00017675; WP:CE09536
Member of lists (Publications lists):
Reinke et al 2004, IVb male soma enriched genes, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
F22G12.5 Aff_F22G12.5 P W All gene names: F22G12.5; 1N773; CE15892; WBGene00009065; WP:CE15892
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph
F26A3.2 Aff_F26A3.2 P W All gene names: F26A3.2; 1I218; CE09667; WBGene00009141; WP:CE09667 WormBase description: Cap binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, oogenesis enriched genes, Reinke et al 2004, GO categories, ViswanathanM et al 2005 S2 sir-2.1 regulated
F31E3.4 Aff_F31E3.4 P W All gene names: F31E3.4; 3I54; CE01269; WBGene00017951; WP:CE01269
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster F, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, GO categories, ViswanathanM et al 2005 S2 sir-2.1 regulated
F33D11.10 Aff_F33D11.10 P W All gene names: F33D11.10; F33D11.10.1; F33D11.10.2; 1G444; CE09901; WBGene00018007; WP:CE09901 WormBase description: intiation factor/helicase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, oogenesis enriched genes, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1 regulated
F33G12.4 Aff_F33G12.4 P W All gene names: F33G12.4; F33G12.4.1; F33G12.4.2; F33G12.4.3; 2F326; CE27150; WBGene00018016; WP:CE27150
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, list of genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F45F2.11 Aff_F45F2.11 P W All gene names: F45F2.11; 5J0; CE10536; WBGene00018483; WP:CE10536
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, list of genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1 regulated
F46B6.4 Aff_F46B6.4 P W All gene names: F46B6.4; 5K258; CE05870; WBGene00009769; WP:CE05870 WormBase description: GTP-binding protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, oogenesis enriched genes, Reinke et al 2004, wt herm vs wt male enriched gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
F47B10.9 Aff_F47B10.9 P W All gene names: F47B10.9; CE03359; WBGene00009820; WP:CE03359; XL530
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster A, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed oogenesis soma, Romagnolo et al 2002 Fig3b Unkown, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F53A2.2 Aff_F53A2.2 P W All gene names: sdz-20; F53A2.2; 3O425; CE16094; WBGene00009950; WP:CE16094
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S8 SAGE genes in the dauer exit
F56F11.4 Aff_F56F11.4 P W All gene names: F56F11.4; 3D953; CE28467; CE31008; WBGene00018991; WP:CE28467; WP:CE31008 WormBase description: 26S protease regulatory subunit
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, oogenesis enriched genes, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, list of genes in cluster E
F58G4.4 Aff_F58G4.4 P W All gene names: sdz-23; F58G4.4; 5I575; CE07309; WBGene00019066; WP:CE07309
H28O16.2 Aff_H28O16.2 P W All gene names: H28O16.2; 1N240; CE34196; WBGene00010420; WP:CE34196
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster F, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, oogenesis enriched genes, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt herm vs wt male enriched gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
K12C11.1 Aff_K12C11.1 P W All gene names: K12C11.1; K12C11.1.1; K12C11.1.2; 1B816; CE26819; WBGene00019673; WP:CE26819 WormBase description: The K12C11.1 gene encodes an ortholog of the human gene PEPTIDASE D (PEPD), which when mutated leads to prolidase deficiency (OMIM:170100).
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
M02B1.3 Aff_M02B1.3 P W All gene names: M02B1.3; M02B1.3.1; M02B1.3.2; 4N603; CE12316; WBGene00010828; WP:CE12316
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1 regulated
R03D7.4 Aff_R03D7.4 P W All gene names: R03D7.4; 2L234; CE01611; WBGene00010990; WP:CE01611
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1 regulated
T04A8.10 Aff_T04A8.10 P W All gene names: sel-13; T04A8.10; 3F788; CE01065; WBGene00011411; WP:CE01065 WormBase description: non-histone chromosomal protein HMG-1
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph
T10C6.10 Aff_T10C6.10 P W All gene names: T10C6.10; 5Q517; CE16385; WBGene00011691; WP:CE16385 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, ViswanathanM et al 2005 S2 sir-2.1 regulated
T11A5.5 Aff_T11A5.5 P W All gene names: sdz-31; T11A5.5; 5K359; CE06411; WBGene00011704; WP:CE06411
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1 regulated
T21E12.4 Aff_T21E12.4 P W All gene names: dhc-1; let-354; spd-4; T21E12.4; 1E969; CE23997; NM_058962; WBGene00000962; WP:CE23997 WormBase description: dhc-1 encodes a cytoplasmic dynein heavy chain homolog required in one-cell embryos for pronuclear migration, centrosome separation, centrosome proximity to the male pronucleus, and mitotic spindle orientation, suggesting that DHC-1 helps position the microtubule organizing center; DHC-1 genetically interacts with SPD-5, a coiled-coil centrosomal protein. WormBase CDS description: dynein heavy chain
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
T21G5.3 Aff_T21G5.3 P W All gene names: glh-1; rhl-2; T21G5.3; 1H433; CE25121; NM_059562; WBGene00001598; WP:CE25121 WormBase description: glh-1 encodes a putative DEAD-box RNA helicase that contains four CCHC zinc fingers and is homologous to Drosophila VASA, a germ-line-specific, ATP-dependent RNA helicase; at permissive temperature, GLH-1 is required redundantly with GLH-4 for proper germ-line development and fertility, specifically for regulating the normal extent of germ-line proliferation, oogenesis, and the production of functional sperm; GLH-1 activity is also likely required for the wild-type morphology of P granules and for localization of several protein components, such as PGL-1, but not for accumulation of P granule mRNAs; GLH-1 interacts in vivo with CSN-5, a COP9 signalosome component, and in vitro with itself and with KGB-1, a JNK-like MAP kinase, ZYX-1, a LIM domain-containing zyxin homologue, and GLH-3; GLH-1 is a constitutive P granule component and thus, with the exception of mature sperm, is expressed in germ cells at all stages of development; consistent with its P granule localization, GLH-1 is cytoplasmic in oocytes and the early embryo, while perinuclear in all later developmental stages as well as in the distal and medial regions of the hermaphrodite gonad; GLH-1 is also expressed in males. WormBase CDS description: RNA helicase
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, ViswanathanM et al 2005 S2 sir-2.1 regulated
T22D1.3 Aff_T22D1.3 P W All gene names: T22D1.3; T22D1.3b.1; T22D1.3b.2; 4H681; CE30188; CE33940; WBGene00020682; WP:CE30188; WP:CE33940 WormBase description: inosine monophosphate dehydrogenase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, herm soma enriched genes, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
T27A3.2 Aff_T27A3.2 P W All gene names: T27A3.2; 1G689; CE30696; WBGene00020839; WP:CE30696 WormBase description: ubiquitin carboxyl-terminal hydrolase
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
T27C10.3 Aff_T27C10.3 P W All gene names: T27C10.3; 1L483; CE19605; WBGene00020858; WP:CE19605
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, list of genes in cluster E
W09B7.2 Aff_W09B7.B P W All gene names: W09B7.2; W09B7.B; 5J305; WBGene00021107
Y116A8C.17 Aff_Y116A8A.I P W All gene names: Y116A8C.17; 4R968; CE23326; WBGene00013794; WP:CE23326
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten lifespan, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed oogenesis soma, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1 regulated
Y116A8C.20 Aff_Y116A8A.F P W All gene names: Y116A8A.F; Y116A8C.20; 4R985; CE23329; WBGene00013797; WP:CE23329
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1 regulated
Y119D3B.11 Aff_Y119D3_447.B P W All gene names: Y119D3B.11; Y119D3B.11.1; Y119D3B.11.2; 3C301; CE32745; WBGene00022488; WP:CE32745
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster F, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, oogenesis enriched genes, Reinke et al 2004, wt herm vs wt male enriched gen, ViswanathanM et al 2005 S2 sir-2.1 regulated
Y37H9A.6 Aff_Y37H9A.6 P W All gene names: ndx-4; Y37H9A.6; Y37H9A.6.1; Y37H9A.6.2; 1O384; CE20230; NM_061012; WBGene00003581; WP:CE20230 WormBase description: The ndx-4 gene encodes a homodimeric diadenosine tetraphosphate (Ap(4)A) hydrolase that belongs to the NUDIX hydrolase family. WormBase CDS description: Bacterial mutT protein
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1 regulated
Y39B6A.11 Aff_Y39B6.V P W All gene names: Y39B6A.11; Y39B6B.V; 5T605; CE21697; WBGene00012673; WP:CE21697
Y39G10AR.12 Aff_Y39G10A_246.K P W All gene names: tpxl-1; Y39G10AR.12; Y39G10AR.12b.1; Y39G10AR.12b.2; 1C866; CE26990; CE29999; WBGene00021470; WP:CE26990; WP:CE29999
Y41E3.4 Aff_Y41E3.4 P W All gene names: ers-1; qrs-5; Y41E3.4; 4P774; CE18372; NM_070411; WBGene00001336; WP:CE18372 WormBase description: ers-1 encodes a glutaminyl (Q) tRNA synthetase that affects growth and embryonic and larval viability in large-scale RNAi screens; it is predicted to be mitochondrial. WormBase CDS description: tRNA synthetases class I (E and Q)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, ViswanathanM et al 2005 S2 sir-2.1 regulated
Y47D3A.21 Aff_Y47D3A.X P W All gene names: Y47D3A.21; 3M366; CE22051; WBGene00012932; WP:CE22051
Y57G11C.8 Aff_Y57G11C.8 P W All gene names: Y57G11C.8; 4P547; CE39974; WBGene00013306; WP:CE39974
Member of lists (Publications lists):
Reinke et al 2004, herm sperm, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, spermatogenesis enriched genes, Reinke et al 2004, fem3 enriched genes, ViswanathanM et al 2005 S2 sir-2.1 regulated
Y59E9AL.4 Aff_Y59E9_122.A P W All gene names: Y59E9AL.4; Y59E9AL.4.1; Y59E9AL.4.2; 4F972; CE25513; WBGene00021994; WP:CE25513
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Climbing, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
Y66A7A.2 Aff_Y66A7A.2 P W All gene names: Y66A7A.2; 3M576; CE22751; WBGene00013422; WP:CE22751
Y6G8.3 Aff_Y6G8.3 P W All gene names: Y6G8.3; 5S83; CE14840; WBGene00012405; WP:CE14840 WormBase description: Zinc finger, C2H2 type (2 domains)
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, GO categories, Reinke et al 2004, list of genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1 regulated
Y76A2A.2 Aff_Y76A2A.2 P W All gene names: cua-1; tag-21; Y76A2A.2; 3O530; CE26305; NM_067377; WBGene00000834; WP:CE26305 WormBase description: The cua-1 gene encodes a putative E1-E2 ATPase orthologous to the human gene KIAA1347 (ATP7A; OMIM:604384), which when mutated leads to Hailey-Hailey disease. WormBase CDS description: Heavy-metal-associated domain containing proteins (2 domains), E1-E2 ATPases (2 domains)
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster F, Reinke et al 2004, fem1 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, mixed oogenesis soma, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, GO categories, ViswanathanM et al 2005 S2 sir-2.1 regulated
ZK673.10 Aff_ZK673.10 P W All gene names: sdz-37; ZK673.10; 2K755; CE16744; WBGene00014064; WP:CE16744
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster E, ViswanathanM et al 2005 S2 sir-2.1 regulated
ZK673.5 Aff_ZK673.5 P W All gene names: ZK673.5; 2K751; CE02394; WBGene00014061; WP:CE02394
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1 regulated
ZK688.9 Aff_C02C2.6 P W All gene names: ZK688.9; 3I972; CE40006; WBGene00022803; WP:CE40006
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, wt herm vs wt male enriched gen, Reinke et al 2004, list of genes in cluster E