Hill et al 2000, developmentally modulated cluster, 98 genes

Gene list file name:Hill2000_T1_cluster1-4.txt
Type of gene identifier:Affymetrix custom chip
Description:Hill et al 2000, Supplymental Dataset, developmentally modulated genes cluster(1,4)  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AFF_F07H5.3 Aff_F07H5.3 P W
AFF_T10B10.2 Aff_T10B10.2 P W
AFF_Y105E8A.U Aff_Y105E8A.U P W
B0464.3 Aff_B0464.3 P W All gene names: nlp-36; B0464.3; B0464.3.1; B0464.3.2; 3K579; CE00017; WBGene00007185; WP:CE00017
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C06H2.1 Aff_C06H2.1 P W All gene names: atp-5; phi-39; C06H2.1; C06H2.1.1; C06H2.1.2; 5L602; CE15602; WBGene00007385; WP:CE15602 WormBase description: ATP synthase D chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

C09H10.2 Aff_C09H10.2 P W All gene names: rpl-41; C09H10.2; C09H10.2.1; C09H10.2.2; C09H10.2.3; 2L388; CE02131; NM_063974; WBGene00004454; WP:CE02131 WormBase description: rpl-41 encodes a large ribosomal subunit L41 protein; by homology, RPL-41 is predicted to function in protein biosynthesis. WormBase CDS description: 60S ribosomal protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              Romagnolo et al 2002  Fig3b Protein Synthesis                                      

C14F11.1 Aff_C14F11.1 P W All gene names: C14F11.1; C14F11.1b.1; C14F11.1b.2; CE02477; CE30862; WBGene00015778; WP:CE02477; WP:CE30862; XG861 WormBase description: Aspartate aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C15C8.3 Aff_C15C8.3 P W All gene names: C15C8.3; 5N225; CE05287; WBGene00007605; WP:CE05287 WormBase description: cathepsin-like protease
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, ViswanathanM et al 2005 S2 Resveratrol                                
                                              regulate WT                                                                        

C16A3.10 Aff_C16A3.10 P W All gene names: C16A3.10; C16A3.10a.1; C16A3.10a.2; C16A3.10c.1; C16A3.10c.2; C16A3.10c.3; 3H484; CE04010; CE30604; CE37708; WBGene00015814; WP:CE04010; WP:CE30604; WP:CE37708 WormBase description: The C16A3.10 gene encodes a homolog of the human gene OAT (OMIM:258870), which when mutated leads to ornithinemia and gyrate atrophy.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

C16A3.5 Aff_C16A3.5 P W All gene names: C16A3.5; C16A3.5.1; C16A3.5.2; 3H471; CE04005; WBGene00015810; WP:CE04005 WormBase description: NADH-ubiquinone oxidoreductase B22
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, McCarroll et al 2004  SFig1-4 conserved w/                                  
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

C29E4.7 Aff_C29E4.7 P W All gene names: C29E4.7; 3J34; CE00089; WBGene00016204; WP:CE00089
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, list of genes in cluster C, Reinke et al 2004,                            
                                              mixed oogenesis soma, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C29E4.8 Aff_C29E4.8 P W All gene names: C29E4.8; C29E4.8.1; C29E4.8.2; 3J40; CE29198; WBGene00016205; WP:CE29198 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Adenylate kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C32H11.12 Aff_C32H11.12 P W All gene names: dod-24; C32H11.12; 4N704; CE19718; NM_070073; WBGene00007875; WP:CE19718
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1 regulated                            

C35B1.5 Aff_C35B1.5 P W All gene names: C35B1.5; C35B1.5.1; C35B1.5.2; C35B1.5.3; 4E848; CE16903; WBGene00016435; WP:CE16903
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

C41D11.8 Aff_C41D11.5 P W All gene names: cps-6; C41D11.8; C41D11.8.1; C41D11.8.2; 1F14; CE29488; NM_058970; WBGene00000787; WP:CE29488
C41G7.6 Aff_C41G7.6 P W All gene names: C41G7.6; 1K102; CE17540; WBGene00008063; WP:CE17540
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm                                                                       

C44E4.6 Aff_C44E4.6 P W All gene names: acbp-1; C44E4.6; C44E4.6.1; C44E4.6.2; C44E4.6.3; C44E4.6.4; 1F204; CE08720; NM_059011; WBGene00016655; WP:CE08720 WormBase description: acyl-CoA-binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C50F4.7 Aff_C50F4.7 P W All gene names: his-37; C50F4.7; 5K27; NM_073065; WBGene00001911 WormBase description: his-37 encodes an H4 histone. WormBase CDS description: histone H4
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C52D10.1 Aff_C52D10.2 P W All gene names: C52D10.1; 4S131; CE17586; WBGene00016875; WP:CE17586
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C53A5.1 Aff_C53A5.1 P W All gene names: phi-60; ril-1; C53A5.1; C53A5.1.1; C53A5.1.2; C53A5.1.3; 5P4; CE08950; WBGene00008262; WP:CE08950
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C53B7.4 Aff_C53B7.4 P W All gene names: asg-2; C53B7.4; C53B7.4.1; C53B7.4.2; CE06974; NM_076751; WBGene00000210; WP:CE06974; XH461 WormBase description: asg-2 encodes a homolog of ATP synthase G required both for growth at a normally high rate and for normal osmoregulation. WormBase CDS description: ATP synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C53C11.2 Aff_C53C11.2 P W All gene names: C53C11.2; CE04265; WBGene00016900; WP:CE04265; XR951
C55A6.12 Aff_C55A6.1 P W All gene names: C55A6.12; 5L980; CE37818; WBGene00044019; WP:CE37818
D2030.4 Aff_D2030.4 P W All gene names: D2030.4; D2030.4.1; D2030.4.2; 1I156; CE09081; WBGene00008414; WP:CE09081 WormBase description: NADH:CoQ oxidoreductase subunit B18
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F02E8.1 Aff_F02E8.1 P W All gene names: asb-2; F02E8.1; F02E8.1.1; F02E8.1.2; CE07016; NM_076369; WBGene00000207; WP:CE07016; XF89 WormBase description: asb-2 encodes a ATP synthase B homolog. WormBase CDS description: ATP synthase B chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C                                                                          

F07D10.1 Aff_F07D10.1 P W All gene names: rpl-11.2; F07D10.1; F07D10.1.1; F07D10.1.2; F07D10.1.3; CE07033; NM_076012; WBGene00004423; WP:CE07033; XC860 WormBase description: rpl-11.2 encodes a large ribosomal subunit L11 protein; by homology, RPL-11.2 is predicted to function in protein biosynthesis. WormBase CDS description: ribosomal protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F09E5.15 Aff_F09E5.2 P W All gene names: prdx-2; tag-56; F09E5.15; F09E5.15.1; F09E5.15.2; 2F669; CE32361; WBGene00006434; WP:CE32361; ceprx2
F09F7.2 Aff_F09F7.2 P W All gene names: mlc-3; F09F7.2; 3G655; CE01236; CE30652; NM_171128; NM_171129; WBGene00003371; WP:CE01236; WP:CE30652
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F11G11.12 Aff_F11G11.12 P W All gene names: col-73; F11G11.12; 2F162; CE09354; NM_062479; WBGene00000649; WP:CE09354 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, list of genes in cluster C,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              LateList                                                                           

F16F9.4 Aff_F16F9.4 P W All gene names: F16F9.4; CE09443; WBGene00017515; WP:CE09443; XJ80 WormBase description: lipase
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b others                                

F20B6.2 Aff_F20B6.2 P W All gene names: vha-12; F20B6.2; F20B6.2.1; F20B6.2.2; CE04424; NM_076310; WBGene00006921; WP:CE04424; XE811 WormBase description: vacuolar ATP synthase (strong)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F20H11.3 Aff_F20H11.3 P W All gene names: mdh-1; F20H11.3; F20H11.3.1; F20H11.3.2; F20H11.3.3; 3H696; CE09512; NM_066056; WBGene00003162; WP:CE09512 WormBase description: mdh-1 encodes a homolog of malate dehydrogenase that is predicted to be mitochondrial. WormBase CDS description: malate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

F23B12.5 Aff_F23B12.5 P W All gene names: F23B12.5; 5O926; CE09597; WBGene00009082; WP:CE09597 WormBase description: F23B12.5 is orthologous to the human gene DIHYDROLIPOAMIDE DEHYDROGENASE (DLD; OMIM:109720), which when mutated leads to lactic acidosis due to lipoamide dehydrogenase deficiency; F23B12.5 protein is predicted to be mitochondrial. WormBase CDS description: dihyrolipoamide acetyltransferase component (pyruvate dehydrogenase complex)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F23C8.5 Aff_F23C8.G P W All gene names: F23C8.5; F23C8.5.1; F23C8.5.2; F23C8.G; 1C986; CE29774; WBGene00017734; WP:CE29774 WormBase description: The F23C8.5 gene encodes an ortholog of the human gene ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT (ETFB), which when mutated leads to glutaricaciduria type IIB (OMIM:130410). WormBase CDS description: electron transfer flavoprotein beta
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

F25H2.11 Aff_F25H2.11 P W All gene names: tct-1; F25H2.11; F25H2.11.1; F25H2.11.2; 1L147; CE09656; NM_060366; WBGene00009122; WP:CE09656 WormBase description: TCTP protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F27C1.7 Aff_F27C1.7 P W All gene names: atp-3; F27C1.7; F27C1.7a.1; F27C1.7a.2; F27C1.7a.3; F27C1.7a.4; 1F996; CE09719; CE36139; WBGene00000230; WBGene00017856; WP:CE09719; WP:CE36139 WormBase description: atp-3 encodes a mitochondrial ATP synthase and is part of a regulatory system that controls and establishes rates of respiration, behavior and aging during development that persist during adulthood.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F27D4.5 Aff_F27D4.5 P W All gene names: tag-173; F27D4.5; F27D4.5.1; F27D4.5.2; 1I305; CE05736; WBGene00006518; WP:CE05736 WormBase description: tag-173/F27D4.5 is orthologous to the human gene BRANCHED CHAIN KETO ACID DEHYDROGENASE E1, ALPHA POLYPEPTIDE (BCKDHB; OMIM:248600), which when mutated leads to maple syrup urine disease, type 1a; F27D4.5 protein is predicted to be mitochondrial. WormBase CDS description: 2-oxoisovalerate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F29C4.2 Aff_F29C4.2 P W All gene names: F29C4.2; F29C4.2.1; F29C4.2.2; 4A881; CE17720; WBGene00017926; WP:CE17720
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F30B5.1 Aff_F30B5.1 P W All gene names: dpy-13; dpy-16; F30B5.1; 4F1; CE04462; NM_068118; WBGene00001074; WP:CE04462 WormBase description: dpy-13 encodes a member of the collagen superfamily containing 20 copies of the collagen triple helix repeat; transcipt levels oscillate, peaking once during each larval stage. WormBase CDS description: cuticular collagen
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T2 xenobiotic                               
                                              induced Collag, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

F32D1.2 Aff_F32D1.2 P W All gene names: F32D1.2; F32D1.2.1; F32D1.2.2; 5E824; CE09866; WBGene00017982; WP:CE09866 WormBase description: ATP synthase epsilion chain
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S5 genes common to                                   
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F36A2.6 Aff_F36A2.6 P W All gene names: rps-15; F36A2.6; F36A2.6.1; F36A2.6.2; 1J392; CE09945; NM_059983; WBGene00004484; WP:CE09945 WormBase description: rps-15 encodes a small ribosomal subunit S15 protein. WormBase CDS description: 40S ribosomal protein S15
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F40E10.3 Aff_F40E10.3 P W All gene names: csq-1; F40E10.3; F40E10.3.1; F40E10.3.2; CE05839; NM_078037; WBGene00000822; WP:CE05839; XP305 WormBase description: calsequestrin like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Roy et al 2002  S2 positivecontrol L1                                   
                                              muscle, ViswanathanM et al 2005  S2 sir-2.1 regulated,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F44E5.1 Aff_F44E5.1 P W All gene names: F44E5.1; F44E5.1.1; F44E5.1.2; F44E5.1.3; 2M64; CE18676; WBGene00009688; WP:CE18676
F44G3.6 Aff_F44G3.6 P W All gene names: skr-3; F44G3.6; F44G3.6.1; F44G3.6.2; 5Q603; CE16037; NM_074658; WBGene00004809; WP:CE16037 WormBase description: The skr-3 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-3(RNAi) animals are at least superficially normal.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F46E10.10 Aff_F46E10.D P W All gene names: F46E10.10; F46E10.10b.1; F46E10.10b.2; F46E10.10c.1; F46E10.10c.2; F46E10.D; F46E10.I; 5G996; CE20820; CE33096; CE33097; WBGene00018491; WP:CE20820; WP:CE33096; WP:CE33097 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F46F11.5 Aff_F46F11.5 P W All gene names: vha-10; F46F11.5; F46F11.5.1; F46F11.5.2; F46F11.5.3; 1G178; CE10604; NM_059240; WBGene00006919; WP:CE10604 WormBase description: vacuolar ATPase G subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F46G10.6 Aff_F46G10.6 P W All gene names: hlh-23; mxl-3; F46G10.6; CE05882; NM_077822; WBGene00003511; WP:CE05882; XN968 WormBase description: Helix-loop-helix DNA-binding domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

F46H5.3 Aff_F46H5.3 P W All gene names: F46H5.3; F46H5.3b.1; F46H5.3b.2; F46H5.3b.3; CE33098; CE37112; WBGene00018519; WP:CE33098; WP:CE37112; XH850 WormBase description: arginine kinase
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , McCarroll et al 2004  SFig1-4                                 
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 LateList                                                       

F48E8.1 Aff_F48E8.1 P W All gene names: lon-1; F48E8.1; 3G567; CE01953; CE29046; CE30996; NM_065765; NM_065766; NM_171866; WBGene00003055; WP:CE01953; WP:CE29046; WP:CE30996 WormBase description: The lon-1 gene encodes a protein belonging to the PR-protein superfamily that is a target of DBL-1 (TGF-beta) signaling, and that regulates polyploidization and body length.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F49C12.13 Aff_F49C12.13 P W All gene names: vha-17; F49C12.13; F49C12.13.1; F49C12.13.2; 4K87; CE37521; NM_069235; WBGene00009882; WP:CE37521
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F52E1.7 Aff_F52E1.7 P W All gene names: hsp-17; F52E1.7; HSP17.5; 5I862; CE04635; CE35323; WBGene00002021; WP:CE04635; WP:CE35323 WormBase description: hsp-17 encodes a heat shock protein that is a member of the hsp16/hsp20/alpha-crystallin family of heat shock proteins; by homology, HSP-17 is predicted to function as a molecular chaperone that protects cells from heat-induced protein aggregation and denaturation; at present, the precise developmental and/or behavioral role of HSP-17, as well as its expression pattern, are not yet known.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Romagnolo et al 2002  Fig2a heat shock,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Climbing, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

F53A2.7 Aff_F53A2.7 P W All gene names: F53A2.7; F53A2.7.1; F53A2.7.2; F53A2.7.3; 3O435; CE16099; WBGene00009952; WP:CE16099 WormBase description: Thiolases
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F53A3.3 Aff_F53A3.3 P W All gene names: rps-22; F53A3.3; F53A3.3.1; F53A3.3.2; F53A3.3.3; 3D39; CE10884; NM_065080; WBGene00004491; WP:CE10884 WormBase description: rps-22 encodes a small ribosomal subunit S15a protein. WormBase CDS description: 40S ribosomal protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F53F4.10 Aff_F53F4.10 P W All gene names: F53F4.10; F53F4.10.1; F53F4.10.2; 5O106; CE10972; WBGene00009992; WP:CE10972 WormBase description: F53F4.10 is orthologous to the human gene NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 2 (NDUFV2; OMIM:600532), which when mutated is associated with susceptibility to Parkinson disease (OMIM:168600); F53F4.10 protein is predicted to be mitochondrial. WormBase CDS description: NADH-ubiquinone dehydrogenase 24 KD subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F54A3.5 Aff_F54A3_31.C P W All gene names: F54A3.5; F54A3.5.1; F54A3.5.2; 2C514; CE25901; WBGene00018784; WP:CE25901
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F54C1.7 Aff_F54C1.7 P W All gene names: pat-10; tnc-1; F54C1.7; F54C1.7.1; F54C1.7.2; F54C1.7.3; 1F588; CE11052; NM_059100; WBGene00003934; WP:CE11052 WormBase description: pat-10 encodes body wall muscle troponin C, the calcium-binding component of the troponin complex of actin thin filaments; PAT-10 is essential for muscle contraction and thus for completion of embryonic morphogenesis and elongation; by homology, PAT-10 likely functions to regulate body wall muscle contraction in response to changes in intracellular calcium; PAT-10 is expressed in body wall muscle but is also detected in vulval and anal muscles; expression in body wall muscle begins during early embryonic morphogenesis, concurrent with expression of other body wall muscle structural components. WormBase CDS description: calcium binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Roy et al 2002  S2 positivecontrol L1                                
                                              muscle, Wang et al 2003  S6 removed genes of                                       
                                              contamination                                                                      

F54C9.5 Aff_F54C9.5 P W All gene names: rpl-5; F54C9.5; F54C9.5.1; F54C9.5.2; 2I861; CE02255; NM_063410; WBGene00004416; WP:CE02255 WormBase description: rpl-5 encodes a large ribosomal subunit L5 protein; by homology, RPL-5 is predicted to function in protein biosynthesis; in C. elegans RPL-5 activity is broadly required for embryonic, larval, germline, and vulval development, as well as normal body coloration, morphology, and postembryonic growth rates. WormBase CDS description: 60S ribosomal protein L5
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

F57B10.3 Aff_F57B10.3 P W All gene names: F57B10.3; F57B10.3b.1; F57B10.3b.2; F57B10.3b.3; F57B10.3b.4; 1H147; CE11302; CE33113; WBGene00019001; WP:CE11302; WP:CE33113 WormBase description: F57B10.3 encodes an experimentally confirmed cofactor-independent phosphoglycerate mutase that is essential for embryonic and larval viability, and for normal body morphology; paradoxically, F57B10.3 is also required for normally short livespan (in mass RNAi screens for Age phenotypes); F57B10.3 is expressed widely in larvae and adults, with highest expression in the nerve ring, intestine and body wall muscles; F57B10.3 probably functions in glycolytic and gluconeogenic metabolism.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F58G1.4 Aff_F58G1.4 P W All gene names: F58G1.4; 2N223; CE17924; WBGene00010266; WP:CE17924
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C                               

F59A1.10 Aff_F59A1.10 P W All gene names: F59A1.10; 5S141; CE18794; WBGene00010296; WP:CE18794
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen                                                                       

H06I04.4 Aff_Y53G8B_1025.B P W All gene names: ubl-1; H06I04.4; H06I04.4a.1; H06I04.4a.2; H06I04.4a.3; H06I04.4b.1; H06I04.4b.2; 3E159; CE20938; CE31022; NM_171089; WBGene00006725; WP:CE20938; WP:CE31022 WormBase description: ubl-1 encodes a protein similar to Drosophila ubiquitin/ ribosomal protein S27a that affects body length, fertility, and larval viability.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

H28O16.1 Aff_H28O16.1 P W All gene names: phi-37; H28O16.1; H28O16.1d.1; H28O16.1d.2; H28O16.1d.3; H28O16.1d.4; 1N245; CE18826; CE34194; CE34195; CE36263; WBGene00010419; WP:CE18826; WP:CE34194; WP:CE34195; WP:CE36263 WormBase description: ATP synthase alpha and beta subunits, ATP synthase Alpha chain, C terminal
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

K01D12.11 Aff_K01D12.11 P W All gene names: cdr-4; K01D12.11; 5M886; CE06050; NM_073709; WBGene00010470; WP:CE06050 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

K10C2.1 Aff_K10C2.1 P W All gene names: K10C2.1; CE37128; WBGene00019617; WP:CE37128; XH40 WormBase description: serine carboxypeptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, herm soma enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

K10C2.4 Aff_K10C2.4 P W All gene names: phi-43; K10C2.4; K10C2.4.1; K10C2.4.2; CE04750; WBGene00019620; WP:CE04750; XH66 WormBase description: K10C2.4 is orthologous to the human gene FUMARYLACETOACETATE (FAH; OMIM:276700), which when mutated leads to disease. WormBase CDS description: fumarylacetoacetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

LLC1.3 Aff_LLC1.3 P W All gene names: LLC1.3; LLC1.3.1; LLC1.3.2; 4P233; CE31971; WBGene00010794; WP:CE31971 WormBase description: LLC1.3 is orthologous to the human gene DIHYDROLIPOAMIDE DEHYDROGENASE (DLD; OMIM:246900), which when mutated leads to dihydrolipoamide dehydrogenase deficiency; LLC1.3 protein is predicted to be mitochondrial. WormBase CDS description: dihydrolipoamide dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

M03A8.1 Aff_M03A8.1 P W All gene names: dhs-28; M03A8.1; CE04770; NM_076745; WBGene00000991; WP:CE04770; XH437 WormBase description: dhs-28 encodes an ortholog of human 17-BETA-HYDROXYSTEROID DEHYDROGENASE 4 (HSD17B4; OMIM:601860, mutated in D-bifunctional protein deficiency), which contains a C-terminal SCP-2 sterol transfer domain; the deletion allele dhs-28(ok450) is superficially wild-type. WormBase CDS description: alcohol dehydrogenase; non-specific lipid transfer protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R01E6.3 Aff_R01E6.3 P W All gene names: cah-4; R01E6.3; CE29433; CE29434; NM_077863; NM_077864; WBGene00000282; WP:CE29433; WP:CE29434; XO161 WormBase description: cah-4 encodes a carbonic anhydrase homolog, which is rather divergent from other such homologs in C. elegans (with at most 38% identity to any other carbonic anhydrase, in or out of C. elegans); it is individually dispensable for viability and for grossly normal postembryonic morphology, and thus may have a more subtle biological function than the basic cytoprotective functions expected for carbonic anhydrases. WormBase CDS description: carbonic anhydrase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

R05F9.6 Aff_R05F9.6 P W All gene names: R05F9.6; 2F181; CE04809; WBGene00019890; WP:CE04809 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: phosphoglucomutase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

R05G6.7 Aff_R05G6.7 P W All gene names: R05G6.7; R05G6.7.1; R05G6.7.2; 4I272; CE29443; WBGene00019900; WP:CE29443 WormBase description: Channel Protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

R07E5.2 Aff_R07E5.2 P W All gene names: prdx-3; R07E5.2; R07E5.2.1; R07E5.2.2; 3F499; CE00657; NM_065491; WBGene00011110; WP:CE00657; ceprx1 WormBase description: Mer5 (mouse)
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2 age                                
                                              different gene, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Oxidation,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Climbing, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

R12C12.1 Aff_R12C12.1 P W All gene names: R12C12.1; R12C12.1a.1; R12C12.1a.2; 2G343; CE02846; CE33434; WBGene00020022; WP:CE02846; WP:CE33434 WormBase description: R12C12.1 is orthologous to human GLYCINE DECARBOXYLASE (GLDC; OMIM:238300), which when mutated leads to glycine encephalopathy.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, fem3 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster C, Reinke et al                               
                                              2004, mixed sperm soma, Reinke et al 2004, GO                                      
                                              categories, Reinke et al 2004, herm soma enriched                                  
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S4 genes pass                            
                                              two-wayANOVA P0                                                                    

R151.2 Aff_R151.2 P W All gene names: R151.2; R151.2b.1; R151.2b.2; R151.2b.3; R151.2b.4; R151.2b.5; R151.2d.1; R151.2d.2; 3I303; CE00745; CE29454; CE29987; CE37138; WBGene00020107; WP:CE00745; WP:CE29454; WP:CE29987; WP:CE37138 WormBase description: R151.2 is orthologous to the human gene PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE 1 (PRPS1; OMIM:311850), which when mutated leads to disease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              Romagnolo et al 2002  Fig3b Metabolism, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S3                                 
                                              genes pass one-way ANOVA, Wang et al 2003  S4 Dauer                                
                                              Enriched, Wang et al 2003  S4 genes pass two-wayANOVA                              
                                              P0                                                                                 

R53.4 Aff_R53.4 P W All gene names: R53.4; R53.4.1; R53.4.2; 2K258; CE03574; WBGene00011273; WP:CE03574 WormBase description: ATP synthase complex f subunit like protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T01C8.5 Aff_T01C8.5 P W All gene names: T01C8.5; CE07462; WBGene00020146; WP:CE07462; XR406 WormBase description: aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T01H3.1 Aff_T01H3.1 P W All gene names: T01H3.1; T01H3.1.1; T01H3.1.2; 2I168; CE03595; WBGene00011347; WP:CE03595 WormBase description: proteolipid protein PPA1 like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T02E1.5 Aff_T02E1.5 P W All gene names: dhs-3; T02E1.5; 1I788; CE13054; NM_059836; WBGene00000967; WP:CE13054 WormBase description: dhs-3 encodes a member of the short-chain dehydrogenases/reductases family (SDR) predicted to be mitochondrial. WormBase CDS description: 3-oxoacyl-[acyl-carrier protein] reductase
T05H4.12 Aff_T05H4.12 P W All gene names: atp-4; T05H4.12; T05H4.12.1; T05H4.12.2; 5G906; CE13291; WBGene00020275; WP:CE13291
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T20D3.2 Aff_T20D3.2 P W All gene names: T20D3.2; T20D3.2.1; T20D3.2.2; 4K94; CE03671; WBGene00011856; WP:CE03671
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T20H4.5 Aff_T20H4.5 P W All gene names: T20H4.5; T20H4.5.1; T20H4.5.2; 3I324; CE00832; WBGene00020636; WP:CE00832 WormBase description: The T20H4.5 gene encodes an ortholog of the human gene NADH DEHYDROGENASE-UBIQUINONE FE-S PROTEIN 8 23 KDA SUBUNIT; MITOCHONDRIAL COMPLEX I TYKY SUBUNIT (NDUFS8; OMIM:602141), which when mutated leads to Leigh syndrome (OMIM:256000); the T20H4.5 protein is predicted to be mitochondrial with 52% accuracy. WormBase CDS description: Mitochondrial complex I 23K chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Romagnolo et al 2002  Fig3b Oxidation,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

T21B10.2 Aff_T21B10.2 P W All gene names: T21B10.2; T21B10.2a.1; T21B10.2a.2; 2J223; CE03684; CE32730; CE36954; WBGene00011884; WP:CE03684; WP:CE32730; WP:CE36954 WormBase description: T21B10.2 is orthologous to human ENOLASE 1 (also CRYSTALLIN, TAU; ENO1; OMIM:172430), which when mutated leads to spherocytic red cell enolase deficiency.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T21C9.5 Aff_T21C9.5 P W All gene names: lpd-9; T21C9.5; T21C9.5.1; T21C9.5.2; 5L61; CE06474; NM_073313; WBGene00003065; WP:CE06474
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

T22B11.5 Aff_T22B11.5 P W All gene names: T22B11.5; 4F462; CE28486; WBGene00020679; WP:CE28486 WormBase description: The T22B11.5 gene encodes an ortholog of the human gene OGDH, which when mutated leads to alpha-ketoglutarate deficiency (OMIM:203740); the T22B11.5 protein is predicted to be mitochondrial with 68% accuracy. WormBase CDS description: 2-oxoglutarate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

T25B9.9 Aff_T25B9.9 P W All gene names: T25B9.9; T25B9.9.1; T25B9.9.2; 4L541; CE06508; WBGene00012015; WP:CE06508 WormBase description: 6-phosphogluconate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T25C8.2 Aff_T25C8.2 P W All gene names: act-5; T25C8.2; T25C8.2.1; T25C8.2.2; T25C8.2.3; 3O694; CE16463; NM_067408; WBGene00000067; WP:CE16463 WormBase description: an ortholog of human cytoplasmic actin; and is expressed only in microvillous intestinal cells and excretory cell. WormBase CDS description: Actins
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

T26C5.1 Aff_T26C5.1 P W All gene names: gst-13; T26C5.1; 2J523; CE03737; NM_063566; WBGene00001761; WP:CE03737 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

T27E9.1 Aff_T27E9.1 P W All gene names: tag-61; T27E9.1; T27E9.1a.1; T27E9.1a.2; 3O553; CE14263; CE33843; CE33844; WBGene00006439; WP:CE14263; WP:CE33843; WP:CE33844 WormBase description: ADP/ATP carrier protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, ViswanathanM et al 2005  S2 sir-2.1 regulated                            

W02F12.5 Aff_W02F12.5 P W All gene names: W02F12.5; W02F12.5.1; W02F12.5.2; W02F12.5.3; 5H188; CE31083; WBGene00020950; WP:CE31083 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: dihydrolipoamide succinyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

W04C9.1 Aff_Y65B4B_12.B P W All gene names: haf-4; W04C9.1; 1A969; CE28355; NM_058338; WBGene00001814; WP:CE28355 WormBase description: haf-4 encodes a member of the ABC transporter family. WormBase CDS description: ABC transporter
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

W10C8.5 Aff_F32B5.1, Aff_W10C8.5 P W All gene names: W10C8.5; W10C8.5.1; W10C8.5.2; W10C8.5.3; 1D422; CE18353; WBGene00021128; WP:CE18353 WormBase description: ATP transferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, fem3 enriched genes,                             
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              list of genes in cluster C, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

Y39B6A.20 Aff_Y39B6.G P W All gene names: asp-1; Y39B6A.20; Y39B6A.20.1; Y39B6A.20.2; Y39B6B.G; 5T524; CE21681; NM_171587; WBGene00000214; WP:CE21681 WormBase description: asp-1 encodes a homolog of cathepsin D aspartic protease; it is transcribed exclusively in intestinal cells of the late embryo and early larvae and is not observed in older larvae or adults; ASP-1 is dispensable for neuronal degeneration. WormBase CDS description: peptidase (A1 pepsin family)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes                                                 

Y49A3A.2 Aff_Y49A3A.B, Aff_Y49A3A.C P W All gene names: phi-51; vha-13; Y49A3A.2; Y49A3A.2.1; Y49A3A.2.2; Y49A3A.2.3; Y49A3A.2.4; Y49A3A.B; Y49A3A.C; CE22210; NM_074158; WBGene00013025; WP:CE22210 WormBase description: ATP synthase alpha and beta subunits ; ATP synthase ab C terminal
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

Y94H6A.10 Aff_Y94H6A_131.A P W All gene names: Y94H6A.10; 4D474; CE36575; WBGene00022382; WP:CE36575
ZC262.5 Aff_R05D3.6 P W All gene names: ZC262.5; 3J430; WBGene00022582 WormBase description: ATPase epsilon chain
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

ZK180.6 Aff_ZK180.6 P W All gene names: ZK180.6; 4F284; CE07624; WBGene00022680; WP:CE07624
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

ZK484.2 Aff_ZK484.2 P W All gene names: haf-9; ZK484.2; 1G661; CE27353; CE33261; NM_059353; NM_182010; WBGene00001819; WP:CE27353; WP:CE33261 WormBase description: haf-9 is orthologous to the human gene ATP-BINDING CASSETTE, SUB-FAMILY B (MDR/TAP), MEMBER 3 (TAP2; OMIM:170261), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Reinke et al 2004, herm soma enriched genes, Romagnolo                             
                                              et al 2002  Fig3b Transporters, Wang et al 2003  S4                                
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

ZK84.1 Aff_ZK84.1 P W All gene names: ZK84.1; 2G313; CE02924; WBGene00022649; WP:CE02924
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster C, Reinke et al 2004,                               
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol                                                                 

ZK892.2 Aff_ZK892.2 P W All gene names: nlt-1; ZK892.2; 2K290; CE01725; NM_063760; WBGene00003773; WP:CE01725 WormBase description: nlt-1 encodes a member of the SCP-2 sterol transfer family. WormBase CDS description: lipid transfer protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0