Hill et al 2000, developmentally modulated cluster, 117 genes

Gene list file name:Hill2000_T1_cluster4-3.txt
Type of gene identifier:Affymetrix custom chip
Description:Hill et al 2000, Supplymental Dataset, developmentally modulated genes cluster(4,3)  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

Aff_F15D4.1_M Aff_F15D4.1_M P W
AFF_F44A2.6 Aff_F44A2.6 P W
AFF_F55A11.4 Aff_F55A11.4 P W
AFF_ZK973_14.M Aff_ZK973_14.M P W
B0507.10 Aff_B0507.8 P W All gene names: B0507.10; 5J232; CE28875; WBGene00015227; WP:CE28875
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, wt herm vs wt male enriched gen                                        

C01G8.3 Aff_C01G8.3 P W All gene names: dhs-1; C01G8.3; 1F848; CE07803; NM_059156; WBGene00000965; WP:CE07803 WormBase description: oxidoreductase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C04F12.8 Aff_C04F12.8 P W All gene names: C04F12.8; 1K274; CE19681; WBGene00007302; WP:CE19681 WormBase description: Dual specificity phosphatase, catalytic domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C04F5.1 Aff_C04F5.1 P W All gene names: rsd-8; sid-1; C04F5.1; 5F603; CE30331; NM_071971; WBGene00004795; WP:CE30331 WormBase description: The sid-1 gene encodes a predicted transmembrane protein with conserved human (OMIM:606816) and mouse homologs of unknown function and is required cell autonomously for systemic RNA interference (RNAi); a SID-1::GFP fusion is enriched at the cell periphery of most nonneuronal cells from late embryogenesis through adulthood with highest levels detected in cells exposed to the environment.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              F, Reinke et al 2004, fem1 enriched genes, Reinke et al                            
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, mixed oogenesis soma, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated                                                                  

C06A6.2 Aff_C06A6.1 P W All gene names: C06A6.2; 4I617; CE31152; CE31153; WBGene00015507; WP:CE31152; WP:CE31153
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma                                     

C07G3.9 Aff_C07G3.9 P W All gene names: ugt-64; C07G3.9; 5D982; CE08000; WBGene00015577; WP:CE08000 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, mixed oogenesis soma, Reinke et al 2004, GO                               
                                              categories                                                                         

C08C3.2 Aff_C08C3.2 P W All gene names: bath-15; C08C3.2; 3I864; CE39087; WBGene00015590; WP:CE39087
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C14B1.9 Aff_C14B1.9 P W All gene names: C14B1.9; 3E814; CE00906; WBGene00007580; WP:CE00906
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C15H11.5 Aff_C15H11.5 P W All gene names: tag-338; C15H11.5; 5O899; CE08182; WBGene00007615; WP:CE08182
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated, ViswanathanM et al                               
                                              2005  S2 daf-16 Resveratrol                                                        

C15H11.6 Aff_C15H11.6 P W All gene names: nxf-2; C15H11.6; 5O896; CE36102; NM_074167; WBGene00003835; WP:CE36102 WormBase description: nxf-2 encodes a predicted homolog of human TAP protein, a member of the NXF family of shuttling transport receptors for nuclear export of mRNA, and it affects embryonic viability.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C16C10.1 Aff_C16C10.1 P W All gene names: C16C10.1; C16C10.1.1; C16C10.1.2; 3F270; CE33519; WBGene00007622; WP:CE33519 WormBase description: carrier protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25A1.5 Aff_C25A1.5 P W All gene names: C25A1.5; 1K755; CE08370; WBGene00007707; WP:CE08370 WormBase description: Yeast hypothetical 44.9 KD protein like
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C27B7.1 Aff_C27B7.1 P W All gene names: spr-2; C27B7.1; 4J657; CE03030; CE27804; NM_069142; WBGene00005007; WP:CE03030; WP:CE27804 WormBase description: spr-2 encodes the C. elegans ortholog of the Drosophila and mammalian SET proteins (OMIM:600960, translocation breakpoint in human SET is associated with acute myeloid leukemia); SPR-2 is predicted to be a member of the SET protein complex that functions in chromatin remodeling, DNA repair, and transcriptional regulation; in C. elegans, SPR-2 may function to regulate the activity and/or levels of the presenilin proteins encoded by sel-12 and hop-1, as mutations in spr-2 suppress mutations in sel-12 in a hop-1-dependent manner; spr-2 is detected in the nuclei of all cells at several developmental stages, including the L3 larval stage.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C29F9.6 Aff_C29F9.6 P W All gene names: C29F9.6; 3A733; CE39230; WBGene00016221; WP:CE39230
C32D5.9 Aff_C32D5.9 P W All gene names: lgg-1; C32D5.9; C32D5.9.1; C32D5.9.2; 2G636; CE01849; NM_062876; WBGene00002980; WP:CE01849
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C38D4.6 Aff_C38D4.6 P W All gene names: ceh-3; nob-2; pal-1; C38D4.6; C38D4.6a.1; C38D4.6a.2; C38D4.6b.1; C38D4.6b.2; 3F896; CE05383; CE27837; NM_065590; WBGene00003912; WP:CE05383; WP:CE27837 WormBase description: pal-1 encodes a homeodomain protein that is the C. elegans Caudal ortholog; PAL-1 is required maternally and embryonically for cell fate specification and posterior patterning during embryogenesis; PAL-1 is also required postembryonically for fate specification of the posterior V6 neuroectoblast during male tail development; PAL-1 is expressed in posterior blastomeres beginning at the four-cell stage of embryogenesis and its expression continues during embryogenesis in posterior-derived tissues and cells undergoing movement or forming midline structures; pal-1 is subject to both transcriptional and translational regulation.
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              Jones et al 2001  Non dauer genes P<0.05, McCarroll et                             
                                              al 2004  SFig1-4 conserved w/ Drosoph, Reinke et al                                
                                              2004, fem1 enriched genes, Reinke et al 2004, list of                              
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, list of genes in cluster E                                 

C44C10.8 Aff_C44C10.8 P W All gene names: hlh-18; hlh-22; hnd-1; C44C10.8; CE05415; NM_077551; WBGene00001981; WP:CE05415; XM301 WormBase description: hnd-1 encodes a Hand bHLH transcription factor required for normal viability, gonadogenesis, and posterior body morphology; HND-1 is required for the formation of both somatic gonadal precursors and primordial germ cells, but not for later gonadogenesis; HND-1 is expressed embryogenesis in embryonic mesodermal precursor cells generating (mostly) body wall muscle, in somatic gonad precursor cells, and in some unidentified head cells; the primary defect in hnd-1 mutants may be, nonautonomously, in mesodermal precursor cells; somatic gonad precursor cells are normally generated in hnd-1 mutants, but not maintained. WormBase CDS description: Helix-loop-helix DNA-binding domain
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes                                 

C48B4.11 Aff_C48B4.11 P W All gene names: C48B4.11; 3K656; CE00487; WBGene00008174; WP:CE00487
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C50C3.1 Aff_C50C3.1 P W All gene names: C50C3.1; 3J281; CE00115; WBGene00016799; WP:CE00115
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, list of                             
                                              genes in cluster order, Reinke et al 2004, wt males vs                             
                                              glp4 male enriched , Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C50F4.9 Aff_C50F4.9 P W All gene names: C50F4.9; 5K2; CE05473; WBGene00008234; WP:CE05473
C54G4.7 Aff_C54G4.7 P W All gene names: C54G4.7; C54G4.7.1; C54G4.7.2; C54G4.7.3; CE05513; NM_059805; WBGene00008317; WP:CE05513
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C55B7.11 Aff_C55B7.11 P W All gene names: C55B7.11; 1H88; CE09022; WBGene00016947; WP:CE09022
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C56G7.1 Aff_C56G7.1 P W All gene names: mlc-4; C56G7.1; C56G7.1.1; C56G7.1.2; 3E482; CE01531; NM_065299; WBGene00003372; WP:CE01531 WormBase description: myosin regulatory light chain 2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

D2089.3 Aff_D2089.3 P W All gene names: D2089.3; 2K952; CE00938; WBGene00008434; WP:CE00938
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F02E9.1 Aff_F02E9.1 P W All gene names: F02E9.1; 1I981; CE09183; WBGene00008528; WP:CE09183
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F08B6.1 Aff_F08B6.F P W All gene names: F08B6.1; F08B6.F; 1H339; CE39717; WBGene00017239; WP:CE39717
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

F08F3.2 Aff_F08F3.2 P W All gene names: acl-6; F08F3.2; F08F3.2a.1; F08F3.2a.2; 5F913; CE09258; CE35851; WBGene00017261; WP:CE09258; WP:CE35851 WormBase description: glycerol-3-phosphate acyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

F08G2.4 Aff_F08G2.4 P W All gene names: F08G2.4; 2O121; 2O123; CE19776; WBGene00008576; WP:CE19776
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S3  genes pass                                   
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

F09B12.2 Aff_F09B12.2 P W All gene names: F09B12.2; CE17644; WBGene00008606; WP:CE17644; XP718
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F09F7.7 Aff_F09F7.7 P W All gene names: F09F7.7; 3G644; CE30655; CE30656; WBGene00017304; WP:CE30655; WP:CE30656
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, Reinke et al 2004, wt herm vs wt                                
                                              male enriched gen, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F10G8.7 Aff_F10G8.7 P W All gene names: F10G8.7; 1K621; CE30750; WBGene00008665; WP:CE30750 WormBase description: DNA excision repair protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F13G3.9 Aff_F13G3.9 P W All gene names: mif-3; F13G3.9; 1H890; CE09371; NM_059668; WBGene00003236; WP:CE09371 WormBase description: macrophage migratory inhibitory factor MIF like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, list of genes in cluster E, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F14H3.12 Aff_F14H3.12 P W All gene names: F14H3.12; 5Q554; CE35483; WBGene00008831; WP:CE35483
F17C11.7 Aff_F17C11.7 P W All gene names: F17C11.7; 5L438; CE05654; CE37354; WBGene00008918; WP:CE05654; WP:CE37354
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F20G2.5 Aff_F20G2.5 P W All gene names: F20G2.5; 5O253; CE09508; WBGene00008988; WP:CE09508
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 TransientList, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

F23H12.3 Aff_F23H12.3 P W All gene names: F23H12.3; 5M829; CE31912; WBGene00009093; WP:CE31912
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

F25D7.2 Aff_F25D7.2 P W All gene names: tag-353; F25D7.2; 1K977; CE09630; WBGene00009112; WP:CE09630
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F25H5.2 Aff_F25H5.2 P W All gene names: F25H5.2; 1J756; CE15897; WBGene00009125; WP:CE15897
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, fem3                                   
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F26D11.1 Aff_F26D11.1 P W All gene names: F26D11.1; 5I463; CE30765; WBGene00017818; WP:CE30765 WormBase description: gluconokinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, intrinsic, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes                                                   

F26E4.11 Aff_F26E4.11 P W All gene names: F26E4.11; F26E4.11.1; F26E4.11.2; 1K371; CE09695; WBGene00009164; WP:CE09695 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, list of genes in cluster E, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F28B3.9 Aff_F28B3.5 P W All gene names: acl-11; F28B3.9; 1F497; CE37364; NM_059078; WBGene00017888; WP:CE37364
F30A10.3 Aff_F30A10.3 P W All gene names: F30A10.3; F30A10.3.1; F30A10.3.2; 1K70; CE32396; WBGene00009262; WP:CE32396
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F31C3.2 Aff_F31C3.2 P W All gene names: F31C3.2; 1P631; CE17731; CE36143; WBGene00009284; WP:CE17731; WP:CE36143
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, GO                              
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

F36A2.9 Aff_F36A2.9 P W All gene names: F36A2.9; 1J397; CE32407; CE32408; WBGene00009456; WP:CE32407; WP:CE32408 WormBase description: phospholipase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F37A4.9 Aff_F37A4.9 P W All gene names: bath-41; F37A4.9; 3H810; CE00790; WBGene00018137; WP:CE00790 WormBase description: The F37A4.9 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

F39H2.4 Aff_F39H2.4 P W All gene names: syp-3; F39H2.4; 1J240; CE17814; NM_059944; WBGene00006377; WP:CE17814
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, Fig2b shared                                   
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F41C3.4 Aff_F41C3.4 P W All gene names: F41C3.4; 2F31; CE39501; WBGene00018270; WP:CE39501
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F42H10.2 Aff_F42H10.2 P W All gene names: F42H10.2; 3J579; CE00164; WBGene00018366; WP:CE00164
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F43D2.1 Aff_F43D2.1 P W All gene names: F43D2.1; 5P93; CE38186; WBGene00009650; WP:CE38186 WormBase description: G1/S-specfic cyclin C like
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig2 cyclin-genes,                              
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F43G9.4 Aff_F43G9.4 P W All gene names: F43G9.4; 1J184; CE10360; WBGene00009667; WP:CE10360
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F46F11.6 Aff_F46F11.6 P W All gene names: F46F11.6; 1G186; CE30535; WBGene00018509; WP:CE30535
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F47B8.8 Aff_F47B8.8 P W All gene names: F47B8.8; 5O813; CE10646; WBGene00009809; WP:CE10646
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F48G7.10 Aff_F48G7.10 P W All gene names: F48G7.10; 5B114; CE10772; WBGene00018621; WP:CE10772
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S3  genes pass                                   
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

F54D7.2 Aff_F54D7.2 P W All gene names: F54D7.2; 1F377; CE36936; WBGene00018797; WP:CE36936
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

F56C11.3 Aff_F56C11.3 P W All gene names: F56C11.3; 1A656; CE17903; WBGene00018955; WP:CE17903
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F56C9.11 Aff_F56C9.9 P W All gene names: F56C9.11; 3I416; CE31004; WBGene00018954; WP:CE31004
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen                                              

F57C9.1 Aff_F57C9.1 P W All gene names: F57C9.1; 1F417; CE11322; CE28472; WBGene00019008; WP:CE11322; WP:CE28472
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 daf-16 Resveratrol                            

F58B3.6 Aff_F58B3.6 P W All gene names: F58B3.6; F58B3.6.1; F58B3.6.2; F58B3.6.3; 4M401; CE06008; WBGene00010232; WP:CE06008 WormBase description: interferon-related protein PC4 like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

F59A2.1 Aff_F59A2.1 P W All gene names: npp-9; F59A2.1; F59A2.1b.1; F59A2.1b.2; F59A2.1b.3; 3E490; CE17939; CE33525; NM_065302; NM_181972; RANUP96; WBGene00003795; WP:CE17939; WP:CE33525 WormBase description: Nucleoporin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes                                                           

K02A11.3 Aff_K02A11.3 P W All gene names: K02A11.3; 1K322; CE06057; WBGene00010488; WP:CE06057 WormBase description: placental protein 11
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

K03B4.1 Aff_K03B4.1 P W All gene names: K03B4.1; 5F169; CE28579; WBGene00019353; WP:CE28579
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

K06H7.7 Aff_K06H7.7 P W All gene names: K06H7.7; 3J172; CE00258; WBGene00019458; WP:CE00258
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

K07B1.3 Aff_K07B1.3 P W All gene names: ucp-4; K07B1.3; 5J815; CE28591; NM_073013; WBGene00006729; WP:CE28591 WormBase description: proton-channel protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K08F11.5 Aff_K08F11.5 P W All gene names: K08F11.5; K08F11.5.1; K08F11.5.2; 4F478; CE11958; WBGene00019544; WP:CE11958 WormBase description: RAS-related protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

K10D2.5 Aff_K10D2.5 P W All gene names: K10D2.5; 3G263; CE02017; WBGene00019631; WP:CE02017
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

M02D8.3 Aff_M02D8.3 P W All gene names: M02D8.3; CE04759; WBGene00019729; WP:CE04759; XJ352
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

R04B5.5 Aff_R04B5.5 P W All gene names: R04B5.5; 5K569; CE06215; WBGene00011003; WP:CE06215 WormBase description: sorbitol dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 daf-16 Resveratrol                            

R05H5.5 Aff_R05H5.5 P W All gene names: R05H5.5; 2K490; CE02292; WBGene00011040; WP:CE02292
R07E5.8 Aff_R07E5.8 P W All gene names: cku-80; R07E5.8; R07E5.8.1; R07E5.8.2; 3F511; CE00660; CEKU80; NM_065498; WBGene00000520; WP:CE00660 WormBase description: cku-80 encodes an ortholog of the mammalian XRCC5 gene (also known as Ku autoantigen, 80kD; OMIM:194364), whose product is a subunit of ATP-dependent DNA helicase II and promotes repair by the nonhomologous end-joining pathway; RNA interference of cku-80 results in increased life span though the mechanism seems to be unrelated to nonhomologous end-joining or telomere maintenance; cku-80 is at least superficially dispensable for viability and gross morphology in RNAi assays.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

R08D7.6 Aff_R08D7.6 P W All gene names: pde-2; R08D7.6; 3K66; CE35749; CE35750; CE37267; WBGene00011146; WP:CE35749; WP:CE35750; WP:CE37267 WormBase description: Cyclic GMP phosphodiesterase
R10D12.12 Aff_R10D12.12 P W All gene names: R10D12.12; 5O442; CE23919; WBGene00011193; WP:CE23919
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T03F6.3 Aff_T03F6.3 P W All gene names: T03F6.3; 3O479; CE16337; WBGene00011399; WP:CE16337 WormBase description: Glucosamine-6-phosphate isomerase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

T03G11.6 Aff_T03G11.6 P W All gene names: T03G11.6; CE04874; WBGene00020199; WP:CE04874; XF796
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T09A5.8 Aff_T09A5.8 P W All gene names: T09A5.8; 2I148; CE01089; WBGene00011636; WP:CE01089 WormBase description: chromosomal organisation modifier protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

T09B4.10 Aff_T09B4.10 P W All gene names: chn-1; tag-69; T09B4.10; T09B4.10.1; T09B4.10.2; 1G758; CE29991; NM_059380; WBGene00000500; WP:CE29991
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E                                                   

T09B4.2 Aff_T09B4.2 P W All gene names: T09B4.2; 1G761; CE13459; WBGene00020376; WP:CE13459
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T19B10.11 Aff_T19B10.11 P W All gene names: mxl-1; T19B10.11; 5L725; CE16417; NM_073455; WBGene00003509; WP:CE16417 WormBase description: Helix-loop-helix DNA-binding domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

T19H5.4 Aff_T19H5.4 P W All gene names: T19H5.4; 2J776; CE01675; WBGene00011849; WP:CE01675
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T20F7.6 Aff_T20F7.6 P W All gene names: T20F7.6; T20F7.6.1; T20F7.6.2; CE29350; WBGene00020633; WP:CE29350; XR480 WormBase description: AMP-activated protein kinase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 TransientList, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

T23F11.5 Aff_T23F11.5 P W All gene names: srg-13; T23F11.5; 3F763; CE02356; NM_065552; WBGene00005170; WP:CE02356 WormBase description: 7tm receptor
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

T23G11.5 Aff_T23G11.5 P W All gene names: T23G11.5; 1I269; CE28965; WBGene00011970; WP:CE28965
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen                                                                       

T25D10.4 Aff_T25D10.4 P W All gene names: T25D10.4; 2G700; CE02061; WBGene00020801; WP:CE02061
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination                                                                      

T26H2.9 Aff_T26H2.9 P W All gene names: nhr-79; T26H2.9; 5T682; CE31072; NM_075333; WBGene00003669; WP:CE31072 WormBase description: Zinc finger, C4 type (two domains)
T27C10.3 Aff_T27C10.3 P W All gene names: T27C10.3; 1L483; CE19605; WBGene00020858; WP:CE19605
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E                                                   

T28D9.2 Aff_T28D9.2 P W All gene names: CeSC35-2; rsp-5; srp-3; T28D9.2; 2G781; CE28094; CE36572; CE36573; CE36574; NM_062906; NM_062907; NM_062908; NM_062909; WBGene00004702; WP:CE28094; WP:CE36572; WP:CE36573; WP:CE36574 WormBase description: splicing factor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, Roy et al 2002  S3 muscle genes,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

W02D3.4 Aff_W02D3.4 P W All gene names: W02D3.4; 1H296; CE14424; WBGene00020933; WP:CE14424
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S3                                 
                                              genes pass one-way ANOVA, Wang et al 2003  S4 Early                                
                                              genes, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

W02H5.8 Aff_W02H5_1932.B P W All gene names: W02H5.8; W02H5.A; W02H5_1932.A; 5D126; CE21240; WBGene00020962; WP:CE21240
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

W03G9.2 Aff_W03G9.2 P W All gene names: W03G9.2; 1F531; CE14556; WBGene00021014; WP:CE14556
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, Fig2b shared gemlines, Reinke et al 2004, wt vs                              
                                              glp-4 enriched genes, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, wt males vs glp4                              
                                              male enriched , Reinke et al 2004, GO categories                                   

W06B11.1 Aff_W06B11.1 P W All gene names: W06B11.1; CE28508; WBGene00021059; WP:CE28508; XG469
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

Y102E9.2 Aff_Y102E9.2 P W All gene names: Y102E9.2; Y102E9.2.1; Y102E9.2.2; 3H815; CE07574; WBGene00022420; WP:CE07574
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

Y106G6H.6 Aff_Y106G6H.6 P W All gene names: Y106G6H.6; Y106G6H.6.1; Y106G6H.6.2; 1L20; CE34225; WBGene00013719; WP:CE34225
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

Y113G7B.5 Aff_Y113G7B.C P W All gene names: fog-2; Y113G7B.5; Y113G7B.C; 5U669; CE23287; CE39287; NM_075495; WBGene00001482; WP:CE23287; WP:CE39287 WormBase description: fog-2 encodes a protein that contains an N-terminal F-box and a C-terminal FOG-2 homology (FTH) domain; during germline development, FOG-2 activity is required for the brief period of hermaphrodite spermatogenesis that occurs during the L3/L4 larval stages; in promoting the onset of spermatogenesis, FOG-2 interacts with the RNA-binding protein GLD-1 which, in turn, binds the tra-2 mRNA 3' untranslated region to repress tra-2 activity in the germline; FOG-2 interacts with GLD-1 through the diverged C-terminal FTH domain, a domain that is both necessary and sufficient to confer GLD-1 binding; polyclonal antibodies raised against FOG-2 indicate that it is a cytoplasmic protein expressed solely in the germline from the L1 larval stage until young adulthood; during earlier larval stages, FOG-2 is detected uniformly throughout the germline, while in L4 larvae and in adult hermaphrodites and males, FOG-2 is found in proliferating and meiotic prophase germ cells.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

Y18D10A.20 Aff_Y18D10A.T P W All gene names: pfn-1; Y18D10A.20; Y18D10A.20.1; Y18D10A.20.2; Y18D10A.T; 1N515; CE21418; NM_060857; WBGene00003989; WP:CE21418 WormBase description: Profilins
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, IVb                             
                                              male soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

Y37D8A.4 Aff_Y37D8A.4 P W All gene names: Y37D8A.4; 3N928; CE20209; WBGene00012546; WP:CE20209
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

Y37H2A.1 Aff_Y37H2A.C P W All gene names: Y37H2A.1; 5S593; CE24206; WBGene00012562; WP:CE24206
Y43F4B.4 Aff_Y43F4B.4 P W All gene names: npp-18; Y43F4B.4; 3O387; CE16629; CeSeh1; NM_067339; WBGene00003804; WP:CE16629 WormBase description: WD domain, G-beta repeat (2 domains)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, list                            
                                              of genes in cluster E                                                              

Y44A6C.1 Aff_Y44A6C.1 P W All gene names: Y44A6C.1; 5V183; CE28852; WBGene00012850; WP:CE28852
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Shen et al 2005  T1 hif-1 depend                                   
                                              hypoxia, Wang et al 2003  S3  genes pass one-way ANOVA,                            
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

Y44A6D.3 Aff_Y44A6D.3 P W All gene names: Y44A6D.3; 5V256; CE31858; WBGene00012854; WP:CE31858
Y4C6B.2 Aff_Y4C6B.G P W All gene names: Y4C6B.2; Y4C6B.G; 4G107; CE21306; CE35096; WBGene00021156; WP:CE21306; WP:CE35096
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Wang et al 2003  S3  genes pass one-way                              
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

Y55B1AL.1 Aff_Y55B1A_122.C P W All gene names: Y55B1AL.1; CE25471; WBGene00021903; WP:CE25471
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

Y55B1BM.1 Aff_Y55B1B_113.A P W All gene names: Y55B1BM.1; Y55B1BM.1a.1; Y55B1BM.1a.2; Y55B1BM.B; 3B26; CE29124; CE30055; CE34130; WBGene00021910; WP:CE29124; WP:CE30055; WP:CE34130
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y71G12B.11 Aff_Y71G12A_195.A P W All gene names: Y71G12B.11; 1C213; CE27024; CE29914; WBGene00022151; WP:CE27024; WP:CE29914
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y95B8A.11 Aff_Y95B8A_84.A P W All gene names: Y95B8A.11; 1B354; CE34441; WBGene00022390; WP:CE34441
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

Y97E10AL.2 Aff_Y97E10A_264.A P W All gene names: Y97E10AL.2; Y97E10AL.2.1; Y97E10AL.2.2; 5I465; CE26316; WBGene00022393; WP:CE26316
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

ZC155.4 Aff_ZC155.6 P W All gene names: ZC155.4; 3G302; CE28154; WBGene00022532; WP:CE28154
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

ZC97.1 Aff_ZC97.1 P W All gene names: tag-354; ZC97.1; 3I852; CE25677; CE33258; WBGene00022516; WP:CE25677; WP:CE33258
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

ZK1128.4 Aff_ZK1128.4 P W All gene names: ZK1128.4; 3L208; CE01686; WBGene00014230; WP:CE01686
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, IVb                             
                                              male soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

ZK370.7 Aff_ZK370.7 P W All gene names: ZK370.7; 3J836; CE29642; WBGene00022721; WP:CE29642
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

ZK652.10 Aff_ZK652.9 P W All gene names: tag-307; ZK652.10; 3I946; CE37465; WBGene00022787; WP:CE37465
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen                                           

ZK856.13 Aff_ZK856.9 P W All gene names: tag-315; ZK856.13; 5K688; CE29016; WBGene00014114; WP:CE29016 WormBase description: transcription factor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen                                           

ZK858.4 Aff_ZK858.4 P W All gene names: mel-26; ZK858.4; 1J711; CE30580; NM_060048; WBGene00003209; WP:CE30580 WormBase description: mel-26 encodes a MATH and BTB/POZ domain-containing protein that functions as a novel substrate-specific adaptor of the CUL-3-containing E3 ubiquitin ligase; MEL-26 is required maternally for formation of mitotic spindles in the early embryo, and as a component of a ubiquitin ligase complex, for degradation of the microtubule-severing protein MEI-1 at the meiosis to mitosis transition; MEL-26 is also required maternally for embryonic morphogenesis; since MEL-26 contains a meprin-associated Traf homology (MATH) domain, it might be involved in apoptosis. WormBase CDS description: kruppel-like zinc-finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

ZK899.2 Aff_ZK899.2 P W All gene names: ZK899.2; ZK899.2.1; ZK899.2.2; CE15467; WBGene00014141; WP:CE15467; XK70
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

ZK973.3 Aff_ZK973_14.K P W All gene names: ZK973.3; ZK973.3.1; ZK973.3.2; 1E937; CE24749; WBGene00022832; WP:CE24749 WormBase description: phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, GO                                     
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0