Hill et al 2000, developmentally modulated cluster, 132 genes

Gene list file name:Hill2000_T1_cluster6-1.txt
Type of gene identifier:Affymetrix custom chip
Description:Hill et al 2000, Supplymental Dataset, developmentally modulated genes cluster(6,1)  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AFF_F08F8.5_G Aff_F08F8.5_G P W
AFF_F31E3.6 Aff_F31E3.6 P W
AFF_F56A11.1 Aff_F56A11.1 P W
B0001.6 Aff_B0001.6 P W All gene names: B0001.6; B0001.6.1; B0001.6.2; B0001.6.3; 4M927; CE31863; WBGene00007091; WP:CE31863
B0205.8 Aff_B0205.8 P W All gene names: B0205.8; 1L306; CE17322; WBGene00015022; WP:CE17322
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0228.6 Aff_B0228.6 P W All gene names: B0228.6; 2I44; CE31283; WBGene00015063; WP:CE31283
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0393.3 Aff_B0393.3 P W All gene names: B0393.3; 3F849; CE00856; WBGene00007168; WP:CE00856 WormBase description: Leucine Rich Repeat (2 copies) (2 domains)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, Fig2b shared gemlines, Reinke et al 2004, list of                            
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt males vs glp4 male                                    
                                              enriched , Reinke et al 2004, wt herm vs wt male                                   
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C01F1.3 Aff_C01F1.3 P W All gene names: phi-41; C01F1.3; C01F1.3a.1; C01F1.3a.2; 2E587; CE06744; CE39553; WBGene00015298; WP:CE06744; WP:CE39553
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Metabolism,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C01F6.5 Aff_C01F6.5 P W All gene names: aly-1; ref-1; C01F6.5; 4J873; CE02954; NM_069187; WBGene00000120; WP:CE02954 WormBase description: RNA recognition motif. (aka RRM, RBD, or RNP domain)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, mixed oogenesis soma, Romagnolo et al 2002                             
                                              Fig3b Metabolism, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C01G6.3 Aff_C01G6.3 P W All gene names: C01G6.3; 2J561; CE37474; WBGene00007225; WP:CE37474
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C02F12.4 Aff_C02F12.4 P W All gene names: tag-52; C02F12.4; CE03899; WBGene00006431; WP:CE03899; XE294 WormBase description: guanine-nucleotide releasing factor of the CDC24 family
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C03C10.3 Aff_C03C10.3 P W All gene names: rnr-2; C03C10.3; C03C10.3.1; C03C10.3.2; C03C10.3.3; 3F184; CE00874; NM_065420; WBGene00004392; WP:CE00874 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Ribonuclease-diphosphate reductase M2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, GO                                  
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C04F6.3 Aff_C04F6.3 P W All gene names: cht-1; C04F6.3; C04F6.3.1; C04F6.3.2; CE03923; CHT1; NM_076187; WBGene00000503; WP:CE03923; XE16 WormBase description: cht-1 encodes a chitinase orthologous to human chitinase-1 (OMIM:600031, mutations are associated with chitotriosidase deficiency); CHT-1 is predicted to function as an extracellular O-glycosyl hydrolase that hydrolyzes the glycosidic bond between two or more carbohydrates; in C. elegans, CHT-1 may play a role in embryogenesis, and may also be required for cuticle degradation during molting and degradation of chitin-containing pathogens as part of a host defense mechanism. WormBase CDS description: glycosyl hydrolase (family 18)
                                              
Member of lists (Publications lists):
                                              Bishop et al 2004  T1 Upregulated in                              
                                              vhl-1 vs WT, Jones et al 2001  Non dauer genes P<0.05,                             
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C06A8.2 Aff_C06A8.2 P W All gene names: C06A8.2; 2I70; CE31292; WBGene00015513; WP:CE31292
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C06E2.5 Aff_C06E2.5 P W All gene names: C06E2.5; C06E2.5.1; C06E2.5.2; CE30595; WBGene00015529; WP:CE30595; XJ476
C07A12.1 Aff_C07A12.1 P W All gene names: ham-2; C07A12.1; CE07992; CE39669; CE39670; WBGene00001821; WP:CE07992; WP:CE39669; WP:CE39670; XF177 WormBase description: The ham-2 gene encodes a C2H2 zinc finger-containing protein required for proper migration of the hermaphrodite-specific neurons (HSNs) and proper attachment of the pharynx to the nose; HAM-2 is expressed in the nuclei of the HSNs during migration, and acts downstream of EGL-5, a posterior group Hox protein, in HSN specification; HAM-2 acts redundantly with UNC-86 to downregulate UNC-43 expression in the HSNs after migration is complete.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Wang et al 2003  S7 SAGE genes in the dataset,                             
                                              Wang et al 2003  S8 SAGE genes in the dauer exit                                   

C07D10.5 Aff_C07D10.5 P W All gene names: C07D10.5; 2H673; CE36628; WBGene00015569; WP:CE36628
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, herm soma enriched genes,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C08B11.5 Aff_C08B11.5 P W All gene names: sap-49; C08B11.5; C08B11.5.1; C08B11.5.2; C08B11.5.3; C08B11.5.4; 2I326; CE36374; WBGene00004723; WP:CE36374 WormBase description: Poly(A) RNA binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes                                                   

C08F1.6 Aff_C08F1.6 P W All gene names: C08F1.6; 2C78; CE08021; WBGene00015610; WP:CE08021
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C11E4.1 Aff_C11E4.1 P W All gene names: C11E4.1; CE31410; WBGene00007516; WP:CE31410; XK203 WormBase description: glutathione peroxidase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T2 lifespan and                                 
                                              Dauer, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C13C4.2 Aff_C13C4.2 P W All gene names: nhr-154; C13C4.2; 5M581; CE08127; WBGene00007547; WP:CE08127 WormBase description: Ligand-binding domain of nuclear hormone receptors, Zinc finger, C4 type (two domains)
C13C4.4 Aff_C13C4.4 P W All gene names: C13C4.4; 5M590; CE20504; WBGene00007548; WP:CE20504
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes                                             

C13G3.2 Aff_C13G3.2 P W All gene names: hot-6; C13G3.2; 5L502; CE05278; NM_073405; WBGene00001991; WP:CE05278
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C16A3.8 Aff_C16A3.8 P W All gene names: tag-213; C16A3.8; 3H463; CE27691; WBGene00015813; WP:CE27691
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, list of genes in cluster F, Reinke et al 2004, wt                            
                                              vs glp-4 enriched genes, Reinke et al 2004, list of                                
                                              genes in cluster order, Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen                                                               

C16C10.4 Aff_C16C10.4 P W All gene names: C16C10.4; 3F261; CE01495; WBGene00007625; WP:CE01495
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C23G10.8 Aff_C23G10.8 P W All gene names: C23G10.8; C23G10.9; 3H292; CE25784; WBGene00016015; WP:CE25784 WormBase description: S. pombe adenylyl cyclase-associated protein (weak)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen                                                       

C25B8.4 Aff_C25B8.4 P W All gene names: C25B8.4; CE27087; CE34259; CE34260; WBGene00016088; WP:CE27087; WP:CE34259; WP:CE34260; XH236 WormBase description: asialoglycoprotein receptor
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, list of genes in                                 
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C25G4.5 Aff_C25G4.5 P W All gene names: dpy-26; C25G4.5; 4N212; CE08398; NM_069977; WBGene00001085; WP:CE08398 WormBase description: SDC-1, SDC-2, and SDC-3 proteins form a complex (detectable by coimmunoprecipitation); these three proteins, in turn, colocalize with DPY-26, DPY-27, and MIX-1 proteins both on a transgenic her-1(+) array and on the X chromosome.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen                                                       

C27A12.7 Aff_C27A12.7 P W All gene names: C27A12.7; C27A12.7a.1; C27A12.7a.2; C27A12.7b.1; C27A12.7b.2; C27A12.7b.3; C27A12.7b.4; C27A12.7b.5; C27A12.7b.6; 1G634; CE08416; CE32810; WBGene00016157; WP:CE08416; WP:CE32810
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C27A2.1 Aff_C27A2.1 P W All gene names: C27A2.1; 2F355; CE27096; WBGene00016151; WP:CE27096
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C27H2.2 Aff_C27H2.3 P W All gene names: C27H2.2; 4O727; CE39327; WBGene00007782; WP:CE39327
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C28A5.4 Aff_C28A5.4 P W All gene names: ceh-43; C28A5.4; 3F536; CE05325; NM_065503; WBGene00000463; WP:CE05325 WormBase description: A homeobox protein of the Distal-less (Dll) class that is required for development of the anterior hypdermis during embryonic morphogenesis for cell adhesion; also affects embryonic and larval viability; it is predominantly expressed in the head hypdodermis, neuronal support cells and CAN neurons. WormBase CDS description: homeobox protein (distal-less subfamily)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Portman et al 2004  T1 25                                    
                                              candidate ray genes, Reinke et al 2004, fem1 enriched                              
                                              genes, Reinke et al 2004, mixed oogenesis soma                                     

C29E6.1 Aff_C29E6.1 P W All gene names: let-653; C29E6.1; C29E6.1b.1; C29E6.1b.2; 4M655; CE05332; CE37323; WBGene00002827; WP:CE05332; WP:CE37323 WormBase description: let-653 encodes a mucin-like protein similar to the highly glycosylated mucins secreted by the apical surface of epithelia and believed to provide a protective barrier to exposed cellular surfaces; LET-653 is required for viability, locomotion, and for maintaining the tubular epithelial structure of the excretory cell canals. WormBase CDS description: LET-653 mucin like protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, ViswanathanM et al 2005 S2 Resveratrol                                
                                              regulate WT                                                                        

C32F10.2 Aff_C32F10.2 P W All gene names: lin-35; C32F10.2; 1G391; CE24823; NM_059285; WBGene00003020; WP:CE24823 WormBase description: lin-35 encodes the C. elegans retinoblastoma protein (Rb) ortholog; lin-35 was first identified in screens for synthetic multivulva (synMuv) genes and as a class B synMuv gene, functions redundantly with class A genes to antagonize Ras signaling and negatively regulate vulval development; in addition, lin-35 activity is required redundantly with: 1) pha-1 and ubc-18 for early steps in pharyngeal morphogenesis, 2) fzr-1 for normal patterns of postembryonic proliferation, 3) xnp-1 for somatic gonad development, and 4) psa-1 for fertility and embryonic and larval development; on its own, lin-35 is also required for wild-type levels of fertility; LIN-35 is expressed broadly in embryos and L1 larvae, but in later larvae and adults is detected in vulval precursor cells and their descendants as well as a subset of head and tail cells.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C32F10.6 Aff_C32F10.6 P W All gene names: crf-2; nhr-2; C32F10.6; C32F10.7; 1G396; CE39002; NM_059288; WBGene00003601; WP:CE39002 WormBase description: nhr-2 encodes a member of the nuclear hormone receptor family that is required for embryonic viability and morphogenesis; expressed during embryogenesis. WormBase CDS description: nuclear homone receptor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C33D9.8 Aff_C33D9.8 P W All gene names: C33D9.8; 4J548; CE03048; WBGene00007901; WP:CE03048
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C38D4.3 Aff_C38D4.3 P W All gene names: C38D4.3; 3F881; CE36378; WBGene00008004; WP:CE36378
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, intrinsic,                                  
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2 daf-16                            
                                              Resveratrol                                                                        

C41H7.3 Aff_C41H7.3 P W All gene names: C41H7.3; 2D297; CE08674; WBGene00016573; WP:CE08674
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C44H4.3 Aff_C44H4.3 P W All gene names: sym-1; C44H4.3; CE08724; NM_078025; WBGene00006366; WP:CE08724; XP201 WormBase description: sym-1 encodes a protein containing 15 contiguous leucine-rich repeats (LRRs) that functionally overlaps with sym-5 and interacts with mec-8 with respect to embryonic viability and attachment of body muscle to the extracellular cuticle; expression begins at the time of embryonic elongation and SYM-1 is secreted from the apical hypodermal surface of the embryo WormBase CDS description: Drosophila chaoptin protein like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C46H3.2 Aff_C46H3.2 P W All gene names: C46H3.2; C46H3.2b.1; C46H3.2b.2; CE29228; CE33921; WBGene00016725; WP:CE29228; WP:CE33921; XB832 WormBase description: tyrosine-protein kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C49F5.6 Aff_C49F5.6 P W All gene names: C49F5.6; CE08857; WBGene00008210; WP:CE08857; XM609
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C52D10.8 Aff_C52D10.8 P W All gene names: skr-13; C52D10.8; 4S106; CE17592; NM_070641; WBGene00004819; WP:CE17592 WormBase description: The skr-13 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-13(RNAi) animals are at least superficially normal. WormBase CDS description: cyclin A-associated protein
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Lund et al 2002  Fig3D Oocyte-en,                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              Romagnolo et al 2002  Fig3b Proteases, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

D1005.2 Aff_D1005.2 P W All gene names: D1005.2; CE29741; WBGene00016996; WP:CE29741; XC81
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

F11C1.5 Aff_F11C1.5 P W All gene names: F11C1.5; CE20666; CE20667; WBGene00008694; WP:CE20666; WP:CE20667; XN617 WormBase description: nir like gene involved in denitrification
F13B12.1 Aff_F13B12.1 P W All gene names: F13B12.1; F13B12.1.1; F13B12.1.2; 4L188; CE05599; WBGene00008729; WP:CE05599
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F14H12.4 Aff_F14H12.4 P W All gene names: F14H12.4; CE39916; CE39917; WBGene00017472; WP:CE39916; WP:CE39917; XE961 WormBase description: protein kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F19B10.1 Aff_F19B10.1 P W All gene names: F19B10.1; 2D975; CE09468; WBGene00017583; WP:CE09468
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F19F10.9 Aff_F19F10.9 P W All gene names: F19F10.9; 5I52; CE27372; WBGene00017605; WP:CE27372 WormBase description: The F19F10.9 gene encodes a homolog of the human SART1 gene, which encodes a protein recognised by IgE that may be involved in atopic disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

F20D12.2 Aff_F20D12.2 P W All gene names: F20D12.2; 4I717; CE04432; WBGene00017642; WP:CE04432
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, list of genes in cluster F, Reinke et al 2004, wt                            
                                              vs glp-4 enriched genes, Reinke et al 2004, list of                                
                                              genes in cluster order, Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen                                                               

F22B7.4 Aff_F22B7.4 P W All gene names: F22B7.4; 3J731; CE00157; WBGene00017695; WP:CE00157 WormBase description: Environmental stress
F25B5.7 Aff_F25B5.7 P W All gene names: F25B5.7; 3H44; CE01924; CE29284; CE29285; CE32391; WBGene00017778; WP:CE01924; WP:CE29284; WP:CE29285; WP:CE32391
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F26D2.2 Aff_F26D2.2 P W All gene names: syp-1; F26D2.2; 5Q887; CE33925; NM_074744; WBGene00006375; WP:CE33925
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, intrinsic,                                  
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, wt                                
                                              herm vs wt male enriched gen                                                       

F28D1.2 Aff_F28D1.2 P W All gene names: F28D1.2; 4N140; CE05742; WBGene00009212; WP:CE05742
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

F30A10.6 Aff_F30A10.6 P W All gene names: F30A10.6; 1K67; CE09807; WBGene00009264; WP:CE09807 WormBase description: Yeast recessive suppressor RSD1 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster E,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F32E10.2 Aff_F32E10.2 P W All gene names: F32E10.2; 4I341; CE04475; WBGene00017990; WP:CE04475 WormBase description: chromo domain of heterochromatin protein
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Lund et al 2002   Fig3C                                 
                                              Germline-intrinsic, Reinke et al 2004, list of genes in                            
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories                                                                         

F32E10.6 Aff_F32E10.6 P W All gene names: F32E10.6; F32E10.6.1; F32E10.6.2; 4I344; CE04479; WBGene00017993; WP:CE04479
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F32H2.6 Aff_F32H2.6 P W All gene names: phi-46; F32H2.6; 1J574; CE09881; WBGene00009343; WP:CE09881 WormBase description: fatty acid synthase (N-terminus)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, Wang et al 2003  S4 Climbing, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F35G12.4 Aff_F35G12.4 P W All gene names: F35G12.4; F35G12.4a.1; F35G12.4a.2; 3F671; CE31501; CE31502; WBGene00009441; WP:CE31501; WP:CE31502 WormBase description: WD domain, G-beta repeat
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

F36H5.4 Aff_F36H5.4 P W All gene names: F36H5.4; 2C53; CE09961; WBGene00018103; WP:CE09961
F37B1.1 Aff_F37B1.1 P W All gene names: gst-24; F37B1.1; 2N900; CE17789; NM_064458; WBGene00001772; WP:CE17789 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

F40E10.1 Aff_F40E10.1 P W All gene names: hch-1; nas-34; F40E10.1; CE24964; NM_078039; WBGene00001828; WP:CE24964; XP316 WormBase description: hch-1 encodes a member of the zinc-dependent metalloprotease family that contains an epidermal growth factor-like domain, a CUB domain, and a TSP1 domain and affects hatching and QL neuroblast migration. WormBase CDS description: metalloprotease
                                              
Member of lists (Publications lists):
                                              Golden et al 2004, N2 vs daf-2                                    
                                              different genes at , Golden et al 2004, N2 vs daf-2 age                            
                                              different gene, Jones et al 2001  Non dauer genes                                  
                                              P<0.05                                                                             

F44F1.6 Aff_F44F1.6 P W All gene names: F44F1.6; 1N854; CE23728; CE23729; WBGene00009698; WP:CE23728; WP:CE23729
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

F45C12.7 Aff_F45C12.7 P W All gene names: F45C12.7; 2C5; CE10448; WBGene00018438; WP:CE10448
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Murphy et al 2003  Fig2 Class2 shorten                                     
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

F45H11.1 Aff_F45H11.1 P W All gene names: F45H11.1; 1K947; CE16055; CE38353; WBGene00009743; WP:CE16055; WP:CE38353 WormBase description: Zinc finger, C2H2 type
F47G4.2 Aff_F47G4.2 P W All gene names: F47G4.2; 1O670; CE19875; WBGene00009823; WP:CE19875 WormBase description: Leucine Rich Repeat (2 copies)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma                                     

F47H4.1 Aff_F47H4.1 P W All gene names: F47H4.1; 5R830; CE16062; WBGene00009834; WP:CE16062 WormBase description: Zinc finger, C2H2 type (2 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E                                                                       

F52C9.1 Aff_F52C9.1 P W All gene names: F52C9.1; 3G423; CE38960; CE38961; WBGene00018672; WP:CE38960; WP:CE38961
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F52D2.2 Aff_F52D2.2 P W All gene names: rgs-8.1; rgs-8; F52D2.2; CE04623; NM_075958; WBGene00004351; WBGene00018685; WP:CE04623; XC570 WormBase description: phosphoprotein 1R20
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Lund et al 2002  Fig3D Oocyte-en, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, intrinsic, Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, list of genes in cluster E, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

F52E10.1 Aff_F52E10.1 P W All gene names: egl-16; sdc-1; F52E10.1; CE03393; NM_078249; WBGene00004745; WP:CE03393; XQ895 WormBase description: sdc-1 encodes a zinc-finger protein of the C2H2-type that affects egg laying and vulval development, and hermaphrodite sex determination; expressed at highest levels in embryos and in adults. WormBase CDS description: Zinc finger, C2H2 type (3 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E                                                                          

F54A5.2 Aff_F54A5.C P W All gene names: F54A5.2; F54A5.C; 1B438; CE20860; WBGene00018787; WP:CE20860
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              herm enriched gen                                                                  

F54C9.9 Aff_F54C9.9 P W All gene names: F54C9.9; 2I871; CE20865; WBGene00010044; WP:CE20865
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen                                           

F55F8.4 Aff_F55F8.4 P W All gene names: tag-326; F55F8.4; F55F8.4.1; F55F8.4.2; F55F8.4.3; 1G222; CE11194; WBGene00018892; WP:CE11194
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, McCarroll et al 2004                                    
                                              SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list                              
                                              of genes in cluster F, Reinke et al 2004, fem1 enriched                            
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F56A3.4 Aff_F56A3.4 P W All gene names: spd-5; F56A3.4; 1F740; CE28834; NM_059138; WBGene00004955; WP:CE28834
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, ViswanathanM et al 2005                            
                                               S2 daf-16 Resveratrol                                                             

F59A6.5 Aff_F59A6.5 P W All gene names: F59A6.5; 2F293; CE02790; WBGene00019087; WP:CE02790
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E                                                                       

F59E12.1 Aff_F59E12.1 P W All gene names: F59E12.1; 2F947; CE28569; WBGene00019118; WP:CE28569
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

H02I12.4 Aff_H02I12.4 P W All gene names: dsl-6; H02I12.4; 4M162; CE36597; NM_069747; WBGene00001108; WP:CE36597 WormBase description: EGF-like domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order                                                                      

K01G5.8 Aff_K01G5.8 P W All gene names: K01G5.8; K01G5.8a.1; K01G5.8a.2; 3L830; CE16198; CE16199; WBGene00010479; WP:CE16198; WP:CE16199
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

K04C1.3 Aff_K04C1.3 P W All gene names: K04C1.3; K04C1.3.1; K04C1.3.2; CE06087; WBGene00010553; WP:CE06087; XO860 WormBase description: Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

K04C2.4 Aff_K04C2.4 P W All gene names: brd-1; K04C2.4; 3H976; CE32690; NM_066097; WBGene00000265; WP:CE32690
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen                                                       

K06A5.4 Aff_K06A5.4 P W All gene names: K06A5.4; 1H39; CE26645; WBGene00019432; WP:CE26645
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

K07F5.13 Aff_K07F5.13 P W All gene names: npp-1; K07F5.13; K07F5.13b.1; K07F5.13b.2; 4K625; CE06127; CE23857; CE23858; NM_069369; NM_069370; NM_069371; WBGene00003787; WP:CE06127; WP:CE23857; WP:CE23858
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

K09H9.6 Aff_K09H9.6 P W All gene names: lpd-6; K09H9.6; 1D714; CE37030; NM_058707; WBGene00003062; WP:CE37030
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated, Wang et al 2003  S5 genes common                            
                                              to feeding ANOVA, Wang et al 2003  S3  genes pass                                  
                                              one-way ANOVA                                                                      

K10B4.3 Aff_K10B4.3 P W All gene names: K10B4.3; 2A406; CE35995; WBGene00019615; WP:CE35995
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster B                                                                          

K11C4.4 Aff_K11C4.4 P W All gene names: odc-1; K11C4.4; 5H380; CE12114; NM_072351; ODC/1; WBGene00003844; WP:CE12114 WormBase description: odc-1 encodes ornithine decarboxylase, the first enzyme of polyamine biosynthesis that catalyzes the conversion of ornithine to putrescine; ODC-1 is required for development when animals are deprived of exogenous polyamines, which are required for oogenesis and completion of embryogenesis; in addition,ODC-1 may contribute to male fertility; ODC-1 activity is detectable at all developmental stages, with highest levels observed in adults and L4 larvae. WormBase CDS description: ornithine decarboxylase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

M01D1.8 Aff_M01D1.8 P W All gene names: fbxb-41; M01D1.8; 2B332; CE12256; WBGene00019703; WP:CE12256 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E                                                                          

M02D8.4 Aff_M02D8.4 P W All gene names: M02D8.4; M02D8.4b.1; M02D8.4b.2; M02D8.4b.3; CE04760; CE31201; CE37263; WBGene00019730; WP:CE04760; WP:CE31201; WP:CE37263; XJ368 WormBase description: asparagine synthase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Murphy et al 2003  Fig2 Class1 elongate                                  
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

M03F8.3 Aff_M03F8.3 P W All gene names: phi-12; M03F8.3; 5G423; CE28622; WBGene00019762; WP:CE28622
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

M106.1 Aff_M106.1 P W All gene names: let-29; mix-1; smc-2; M106.1; R06F6.10; 2L131; CE18083; NM_063930; WBGene00003367; WP:CE18083 WormBase description: The mix-1 gene encodes a homolog of SMC2 involved in chromosome segregation, X-chromosome gene regulation, and repression of X-linked genes during dosage compensation. WormBase CDS description: mitotic chromosome and X-chromosome associated MIX-1 protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

R02D3.3 Aff_R02D3.3 P W All gene names: R02D3.3; R02D3.3.1; R02D3.3.2; 4A980; CE36601; WBGene00019821; WP:CE36601
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

R07E3.5 Aff_R07E3.5 P W All gene names: acl-5; R07E3.5; CE02299; NM_077331; WBGene00011106; WP:CE02299; XK944
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

R107.1 Aff_R107.1 P W All gene names: indy-3; nac-2; nat-1; R107.1; R107.1.1; R107.1.2; 3K130; CE33536; NM_066599; WBGene00003518; WP:CE33536
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

R10E4.4 Aff_R10E4.4 P W All gene names: mcm-5; R10E4.4; R10E4.4.1; R10E4.4.2; 3F378; CE03558; NM_065457; WBGene00003157; WP:CE03558 WormBase description: CDC46
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

R148.5 Aff_R148.5 P W All gene names: R148.5; 3E259; CE31583; CE32711; WBGene00020104; WP:CE31583; WP:CE32711
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

T03F1.9 Aff_T03F1.9 P W All gene names: hcp-4; T03F1.9; 1E432; CE13112; NM_058843; WBGene00001832; WP:CE13112 WormBase description: The hcp-4 gene encodes a centromere protein (CENP)-C homolog, holocentric protein (HCP)-4.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

T05H10.4 Aff_T05H10.4 P W All gene names: T05H10.4; T05H10.4.1; T05H10.4.2; 2I343; CE01641; WBGene00011509; WP:CE01641
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

T06E4.1 Aff_T06E4.1 P W All gene names: hcp-2; T06E4.1; 5K129; CE06368; NM_073088; WBGene00001830; WP:CE06368
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, list of                             
                                              genes in cluster order, Reinke et al 2004, wt males vs                             
                                              glp4 male enriched                                                                 

T07C4.2 Aff_T07C4.2 P W All gene names: tbx-8; T07C4.2; 3L437; CE36891; NM_066886; WBGene00006545; WP:CE36891 WormBase description: Brachyury
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes                                 

T08D10.2 Aff_T08D10.2 P W All gene names: T08D10.2; CE33174; WBGene00011615; WP:CE33174; XM569 WormBase description: T08D10.2 encodes an ortholog of the human histone demethylase LSD1 (KIAA0601), and a paralog of C. elegans SPR-5; similar histone demethylase homologs are found in human, mouse, Drosophila, fission yeast, and Arabidopsis; T08D10.2 is predicted to demethylate histone H3 lysine 4 residues and act as a transcriptional corepressor. WormBase CDS description: corticosteroid-binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

T13F2.3 Aff_T13F2.3 P W All gene names: pis-1; T13F2.3; 4K558; CE13623; CE23980; NM_069347; NM_069348; WBGene00004031; WP:CE13623; WP:CE23980 WormBase description: pis-1 encodes an ortholog of mammalian Pax transcription activation domain interacting protein PTIP; PIS-1 has an N-terminal glutamine/asparagine-rich domain and four C-terminal BRCT domains, and is dispensable for obvious functions in mass RNAi assays; mammalian PTIP binds to the activation domain of Pax2 and other Pax proteins, and colocalizes with Pax2 to actively expressed chromatin, and appears to be required for embryonic mitosis (perhaps because of a link between BRCT domains and DNA repair).
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

T13F2.7 Aff_T13F2.7 P W All gene names: T13F2.7; 4K540; CE13631; WBGene00011747; WP:CE13631
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

T19B10.1 Aff_T19B10.1 P W All gene names: cyp-29A2; T19B10.1; 5L699; CE06455; NM_073446; WBGene00011830; WP:CE06455 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 Cytochrome                                
                                              P450, McCarroll et al 2004  SFig5 conserved w/ yeast,                              
                                              Menzel et al 2001  T3 CYP genes, Reinke et al 2004,                                
                                              list of genes in cluster order, Reinke et al 2004, list                            
                                              of genes in cluster C, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

T22G5.7 Aff_T22G5.7 P W All gene names: dod-5; spp-12; T22G5.7; 5O369; CE13994; NM_074042; WBGene00004997; WP:CE13994
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

T24F1.3 Aff_T24F1.3 P W All gene names: T24F1.3; T24F1.3b.1; T24F1.3b.2; T24F1.3b.3; 2L601; CE02363; CE38227; WBGene00011995; WP:CE02363; WP:CE38227 WormBase description: DAG binding domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

T27F2.1 Aff_T27F2.1 P W All gene names: skp-1; T27F2.1; T27F2.1.1; T27F2.1.2; 5M129; CE06519; NM_073549; WBGene00004806; WP:CE06519 WormBase description: Drosophila puff specific protein BX42 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

T28B8.1 Aff_T28B8.1 P W All gene names: T28B8.1; T28B8.1.1; T28B8.1.2; 1I711; CE14329; WBGene00012113; WP:CE14329
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

W04A8.1 Aff_W04A8.1 P W All gene names: W04A8.1; 1O428; CE16535; WBGene00012236; WP:CE16535 WormBase description: W04A8.1 encodes a protein weakly similar to human microcephalin (MCPH1; OMIM:607117, mutated in primary microcephaly); while their primary sequence similarity is very subtle (only being detectable with psi-BLAST on NCBI-nr, using C. briggsae CBG13622 as a query sequence), both W04A8.1 and microcephalin has similar ordering of BRCT domains (one N-terminal, two C-terminal); W04A8.1 has no obvious function in mass RNAi screens. WormBase CDS description: BRCA1 C Terminus (BRCT) domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 daf-16 Resveratrol                                                        

W07E6.4 Aff_W07E6.4 P W All gene names: prp-21; W07E6.4; W07E6.4.1; W07E6.4.2; 2A779; CE17296; Ceprp21; NM_061345; WBGene00004188; WP:CE17296 WormBase description: splicing factor
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

W09C5.1 Aff_W09C5.1 P W All gene names: W09C5.1; W09C5.1.1; W09C5.1.2; 1O220; CE20164; WBGene00012351; WP:CE20164
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

Y106G6E.5 Aff_Y106G6E.5 P W All gene names: ced-12; mig-16; Y106G6E.5; Y106G6E.5.1; Y106G6E.5.2; 1K800; CE27228; NM_060292; WBGene00000426; WP:CE27228 WormBase description: ced-12 is required both for phagocytotic engulfment of dying (apoptotic) cells, and for normal migrations of healthy cells during development.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

Y11D7A.3 Aff_Y11D7A.3 P W All gene names: Y11D7A.3; 4K5; CE19029; CE39969; WBGene00012428; WP:CE19029; WP:CE39969
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

Y13C8A.2 Aff_Y13C8_223.C P W All gene names: Y13C8A.2; CE21363; WBGene00021189; WP:CE21363; XR499
Y39A1C.2 Aff_Y39A1C.2 P W All gene names: oxi-1; Y39A1C.2; 3L955; CE19147; NM_066991; WBGene00003898; WP:CE19147 WormBase description: HECT-domain (ubiquitin-transferase).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph                                                                            

Y41D4B.10 Aff_Y41D4A_2911.A P W All gene names: dsl-3; Y41D4B.10; 4C377; CE27622; NM_067707; WBGene00001105; WP:CE27622
Y41D4B.26 Aff_Y41D4B_930.A P W All gene names: nhr-146; Y41D4B.26; 4C397; CE36740; WBGene00021525; WP:CE36740
Y46E12A.4 Aff_Y119D3_463.A P W
Y48B6A.6 Aff_Y48B6A.G P W All gene names: Y48B6A.6; Y48B6A.6a.1; Y48B6A.6a.2; Y48B6A.G; 2O479; CE32970; CE32971; WBGene00012980; WP:CE32970; WP:CE32971
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

Y52B11A.9 Aff_Y52B11A.9 P W All gene names: Y52B11A.9; 1L626; CE20297; WBGene00013128; WP:CE20297
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, McElwee et al 2003  T1 targets of daf-16,                                 
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, fem1 enriched genes, Reinke et al 2004,                                
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes, Reinke et al 2004, wt vs                                 
                                              glp-4 enriched genes, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y54E2A.3 Aff_Y54E2A.3 P W All gene names: tac-1; Y54E2A.3; 2P38; 2P40; CE20302; NM_064658; WBGene00006381; WP:CE20302 WormBase description: tac-1 encodes the sole C. elegans member of the transforming acidic coiled-coil (TACC) protein family whose members contain highly conserved C-terminal coiled-coil domains; during early embryogenesis, TAC-1 activity is essential for such microtubule-based processes as pronuclear migration and mitotic spindle elongation; TAC-1 interacts in vivo with, and mutually stabilizes, ZYG-9, a microtubule-associated protein (MAP) also required for pronuclear migration; TAC-1 also interacts with ZYG-8, a kinase domain-containing MAP required for proper spindle positioning during anaphase of the first embryonic cell division; TAC-1 is a core component of centrosomes, and also localizes to the meiotic spindle poles, the mitotic spindle, and the cytoplasm.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

Y59A8B.6 Aff_Y59A8A.M P W All gene names: Y59A8A.M; Y59A8B.6; Y59A8B.6.1; Y59A8B.6.2; 5S521; CE28858; WBGene00013343; WP:CE28858
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated                                 

Y63D3A.3 Aff_Y63D3A.3 P W All gene names: fbxb-101; Y63D3A.3; 1O681; CE25528; WBGene00013404; WP:CE25528
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y69A2AR.1 Aff_Y69A2A_3269.A P W All gene names: Y69A2AR.1; Y69A2AR.1b.1; Y69A2AR.1b.2; 4D435; CE36362; CE36363; CE36364; CE36365; WBGene00022074; WP:CE36362; WP:CE36363; WP:CE36364; WP:CE36365
Y69A2AR.28 Aff_Y69A2A_7278.J P W All gene names: Y69A2AR.28; 4D376; CE26562; WBGene00022099; WP:CE26562
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y71A12B.3 Aff_Y71A12B.N P W All gene names: Y71A12B.3; 1O485; WBGene00013501
Y71D11A.3 Aff_Y71D11A.C P W All gene names: Y71D11A.3; 3C231; ACMSD; CE25548; CE32030; WBGene00022104; WP:CE25548; WP:CE32030
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

Y77E11A.10 Aff_Y77E11A_3443.M P W All gene names: clp-6; Y77E11A.10; 4C192; CE25611; NM_067680; WBGene00000546; WP:CE25611 WormBase description: clp-6 encodes a calpain homolog that has significant identity to mammalian calpains over its whole length and that contains motifs typical of calpains, including a thiol (cysteine) protease active site and a Ca[2+]-binding domain; CLP-6 is not required for degenerative (necrotic-like) cell death in neurons induced by mutations such as mec-4(d), deg-3(d), or gsa-1(gf), since clp-6(RNAi) has no effect on such degeneration.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, fem3 enriched                              
                                              genes                                                                              

ZC204.2 Aff_ZC204.2 P W All gene names: ZC204.2; 2B955; CE15086; WBGene00022554; WP:CE15086 WormBase description: homeobox protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

ZK1010.3 Aff_ZK1010.3 P W All gene names: ZK1010.3; ZK1010.3.1; ZK1010.3.2; 3O69; CE37862; WBGene00014177; WP:CE37862 WormBase description: FRG1-like actin crosslinking protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

ZK1053.4 Aff_ZK1053.4 P W All gene names: ZK1053.4; 1N835; CE16763; WBGene00014199; WP:CE16763
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

ZK1098.1 Aff_ZK1098.1 P W All gene names: ZK1098.1; 3K613; CE03847; WBGene00014218; WP:CE03847 WormBase description: ZK1098.1 encodes a protein, with multiple WW/rsp5/WWP domains and FF domains, required for embryonic viability and for normally high rates of postembryonic growth. WormBase CDS description: WW/rsp5/WWP domain containing proteins (2 domains)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

ZK512.3 Aff_ZK512.3 P W All gene names: ced-11; ZK512.3; 3K213; CE00409; NM_066620; WBGene00000425; WP:CE00409 WormBase description: The ced-11 gene encodes a predicted transmembrane ion channel related to the long transient receptor potential channel (LTRPC) subfamily of TRP channels found in Drosophila and mammals; CED-11 functions as a downstream effector in the programmed cell death pathway and may play a role in affecting the morphological changes seen in the nucleus, cytoplasm, and plasma membrane of apoptotic cells.
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S4 TransientList,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

ZK783.1 Aff_ZK783.1 P W All gene names: fbn-1; ZK783.1; 3I729; CE25695; WBGene00022816; WP:CE25695 WormBase description: ZK783.1 is homologous to human fibrillin-1 (FBN1), which when mutated leads to Marfan syndrome (OMIM:154700).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

ZK970.7 Aff_ZK970.7 P W All gene names: ZK970.7; 2K603; CE02407; WBGene00014173; WP:CE02407 WormBase description: OV-17 antigen precursor