Reinke et al 2004, IVb male soma enriched genes, 433 genes

Gene list file name:Reinke2004_Fig1_IVb_male-soma-enriched_genes.txt
Type of gene identifier:MA primer pair (sjj)
Description:Reinke et al 2004, Fig1 IVb male soma enriched genes  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

B0205.9 B0205.9 P W All gene names: B0205.9; 1L299; CE17323; WBGene00015023; WP:CE17323
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

B0213.6 B0213.6 P W All gene names: nlp-31; B0213.6; 5E459; CE16777; NM_071706; WBGene00003769; WP:CE16777 WormBase description: nlp-31 encodes five predicted neuropeptide-like proteins; in C. elegans, nlp-31 is part of the YGGWamide neuropeptide family that also contains nlp-24, nlp-25, and nlp-27-32; nlp-31 is expressed in the hypodermis, suggesting that the peptides it encodes may have a non-neuronal function; nlp-31 expression is also detected in precomma-stage embryos; as loss of nlp-31 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of the nlp-31-encoded peptides in development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, IVb male soma enriched genes                                           

B0244.8 B0244.8 P W All gene names: egg-1; B0244.8; 3G819; CE32094; WBGene00015083; WP:CE32094 WormBase description: LDL receptor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S6                                 
                                              removed genes of contamination                                                     

B0272.1 B0272.1 P W All gene names: tbb-4; B0272.1; CE00850; NM_077184; WBGene00006538; WP:CE00850; XK54 WormBase description: tubulin beta chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Portman et al 2004  T1 newly found ray-genes                              
                                              in25c, Portman et al 2004  T1 25 candidate ray genes,                              
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0280.5 B0280.5 P W All gene names: B0280.5; 3I192; CE31868; WBGene00015102; WP:CE31868 WormBase description: B0280.5 encodes a protein with a chitin binding peritrophin-A domain that is required, in conjunction with CEJ-1, for early embryonic development; B0280.5 mRNA is expressed specifically in the adult hermaphrodite germ line, is a direct target of GLD-1, and has an RNAi phenotype consistent with the hypothesis that B0280.5 is an effector of GLD-1 in the germline.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, IVb male                                
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination                                                                      

B0348.6 B0348.6 P W All gene names: ife-3; B0348.6; B0348.6a.1; B0348.6a.2; 5A486; CE17331; CE27570; CE30590; NM_070722; NM_070723; NM_171920; WBGene00002061; WP:CE17331; WP:CE27570; WP:CE30590 WormBase description: ife-3 encodes one of five C. elegans homologs of the mRNA cap-binding protein eIF4E; by homology, IFE-3 is predicted to bind capped mRNA and mediate its recruitment to ribosomes during translation initiation; in vitro, IFE-3 binds a monomethylated guanosine cap structure but does not bind a trimethylated guanosine cap, which suggests that IFE-3 likely mediates translation of those mRNAs that do not contain a spliced-leader sequence; of the C. elegans eIF4E isoforms, IFE-3 is the most similar to human eIF4E and is the only isoform required for viability (homozygous ife-3 mutant embryos arrest in the early division stages of embryogenesis); IFE-3 is enriched in the adult gonad.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

B0563.7 B0563.7 P W All gene names: B0563.7; CE02445; WBGene00015264; WP:CE02445; XJ770 WormBase description: Calmodulin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C01C4.1 C01C4.1 P W All gene names: nlp-1; C01C4.1; CE29554; NM_076239; WBGene00003739; WP:CE29554; XE347 WormBase description: nlp-1 encodes a predicted neuropeptide-like protein of the MSFamide family with similarity to Aplysia californica (sea hare) buccalin, a neuropeptide that regulates acetylcholine-induced muscle contraction; NLP-1 is expressed in the phasmid PHB tail sensory neuron, lateral neurons, head neurons, and the intestine; the precise role of NLP-1 in nervous system function and development is not yet known. WormBase CDS description: A. californica buccalin precursor (weak)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

C01G6.2 C01G6.2 P W All gene names: C01G6.2; 2J557; CE02958; WBGene00007224; WP:CE02958
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, spermatogenesis enriched genes, Reinke et al                              
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes, Reinke et al 2004, wt vs glp-4                                
                                              enriched genes, Reinke et al 2004, list of genes in                                
                                              cluster D, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C03C11.1 C03C11.1 P W All gene names: C03C11.1; 1K591; CE07873; WBGene00007274; WP:CE07873
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, spermatogenesis enriched genes, Reinke et al                              
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes, Reinke et al 2004, wt vs glp-4                                
                                              enriched genes, Reinke et al 2004, list of genes in                                
                                              cluster D, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C06A12.5 C06A12.5 P W All gene names: C06A12.5; 4S374; CE18489; WBGene00007358; WP:CE18489
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Romagnolo et al 2002  Fig3b others,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C06B3.7 C06B3.7 P W All gene names: C06B3.7; 5O391; CE28430; WBGene00007366; WP:CE28430
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

C07B5.3 C07B5.3 P W All gene names: C07B5.3; CE00893; WBGene00007408; WP:CE00893; XK140
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Lund et al 2002  Fig4 Mount 15, Reinke et al                               
                                              2004, IVb male soma enriched genes, Wang et al 2003  S7                            
                                              SAGE genes in the dataset, Wang et al 2003  S3  genes                              
                                              pass one-way ANOVA, Wang et al 2003  S4 Dauer Enriched,                            
                                              Wang et al 2003  S8 SAGE genes in the dauer exit, Wang                             
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

C08E3.1 C08E3.1 P W All gene names: C08E3.1; 2B925; CE08004; WBGene00015593; WP:CE08004
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

C09G12.5 C09G12.5 P W All gene names: C09G12.5; 4E241; CE16839; WBGene00015655; WP:CE16839
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown                                          

C10A4.5 C10A4.5 P W All gene names: C10A4.5; CE29079; WBGene00015666; WP:CE29079; XI9
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, ViswanathanM et al 2005 S2 Resveratrol                                
                                              regulate WT                                                                        

C10C5.5 C10C5.5 P W All gene names: C10C5.5; 4K147; CE36099; WBGene00007509; WP:CE36099 WormBase description: aminoacylase-1
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, GO categories, Reinke et                              
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C10H11.10 C10H11.10 P W All gene names: kca-1; C10H11.10; 1F328; CE39088; NM_059042; WBGene00015698; WP:CE39088
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, IVb                               
                                              male soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

C13A10.2 C13A10.2 P W All gene names: C13A10.2; 2B648; CE08124; WBGene00015729; WP:CE08124
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

C14B1.3 C14B1.3 P W All gene names: C14B1.3; 3E793; CE00900; WBGene00007574; WP:CE00900 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

C15A11.1 C15A11.1 P W All gene names: col-35; C15A11.1; 1H962; CE08169; NM_059685; WBGene00000612; WP:CE08169 WormBase description: col-35 encodes a collagen that is individually dispensable for viability and gross morphology in mass RNAi screens; the amino- and carboxyl-terminal cysteine-rich regions of COL-35 are most closely related to those of COL-8, COL-19, and COL-39. WormBase CDS description: collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C16A11.4 C16A11.4 P W All gene names: C16A11.4; 2E519; CE34688; WBGene00015817; WP:CE34688
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, Reinke et al 2004, IVb male soma                              
                                              enriched genes                                                                     

C16A3.2 C16A3.2 P W All gene names: C16A3.2; 3H479; CE08188; WBGene00015807; WP:CE08188 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, IVb male                                
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C16C8.10 C16C8.10 P W All gene names: C16C8.10; 2D756; CE08221; WBGene00015848; WP:CE08221
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C16C8.17 C16C8.17 P W All gene names: C16C8.17; 2D733; CE08228; WBGene00015854; WP:CE08228
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

C16C8.7 C16C8.7 P W All gene names: C16C8.7; 2D750; CE08218; WBGene00015845; WP:CE08218
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

C16C8.8 C16C8.8 P W All gene names: C16C8.8; 2D752; CE08219; WBGene00015846; WP:CE08219
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

C16C8.9 C16C8.9 P W All gene names: C16C8.9; 2D754; CE08220; WBGene00015847; WP:CE08220
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C16D9.5 C16D9.5 P W All gene names: C16D9.5; 5I722; CE35239; WBGene00015860; WP:CE35239
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

C17B7.2 C17B7.2 P W All gene names: C17B7.2; 5D829; CE16850; WBGene00015876; WP:CE16850
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

C17B7.4 C17B7.4 P W All gene names: C17B7.4; 5D819; CE16852; WBGene00015878; WP:CE16852
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Wang et al 2003  S4 TransientList, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

C18A11.1 C18A11.1 P W All gene names: C18A11.1; CE04032; WBGene00015947; WP:CE04032; XI687
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Murphy                            
                                              et al 2003  Fig2 Class1 elongate lifespan, Reinke et al                            
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 Dauer Enriched,                            
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

C24A1.1 C24A1.1 P W All gene names: flp-24; C24A1.1; C24A1.1.1; C24A1.1.2; 3B343; CE38488; WBGene00016028; WP:CE38488
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

C24B9.9 C24B9.9 P W All gene names: dod-3; C24B9.9; 5D208; CE17451; NM_071341; WBGene00016052; WP:CE17451
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Murphy et al 2003  Fig2 Class1 elongate                            
                                              lifespan, Reinke et al 2004, IVb male soma enriched                                
                                              genes, Shen et al 2005  T1 hif-1 depend hypoxia, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 Dauer Enriched, Wang et al 2003  S4 genes pass                            
                                              two-wayANOVA P0                                                                    

C25F9.8 C25F9.8 P W All gene names: C25F9.8; 5T869; CE17472; WBGene00007727; WP:CE17472
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

C26F1.10 C26F1.10 P W All gene names: flp-21; C26F1.10; C26F1.10.1; C26F1.10.2; 5I273; CE30733; NM_072610; WBGene00001464; WP:CE30733 WormBase description: flp-21 encodes a single FMRFamide-related neuropeptide (FaRP) that serves as a ligand for NPR-1, a G protein-coupled receptor that regulates social versus solitary feeding behavior in several Caenorhabditis species; genetic analysis suggests that FLP-21 acts through NPR-1 to inhibit social feeding behavior; FLP-21 is expressed in the ADL, ASE and ASH sensory neurons, the URA motor neurons, the MC, M2 and M4 pharyngeal neurons, and the intestine; flp-21 encodes the only FMRFamide-related neuropeptide (FaRP) encoded by the C. elegans genome that activates both the social (215F) and the solitary (215V) forms of NPR-1 in both Xenopus oocytes and pharyngeal assays.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Wang et al 2003  S3  genes pass one-way                            
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C27H5.6 C27H5.6 P W All gene names: C27H5.6; 2H474; CE34715; WBGene00016175; WP:CE34715
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, GO categories, Reinke et al 2004, IVb male                             
                                              soma enriched genes                                                                

C28C12.3 C28C12.3 P W All gene names: C28C12.3; 4J253; CE04110; WBGene00016179; WP:CE04110
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

C28H8.1 C28H8.1 P W All gene names: C28H8.1; 3H17; CE01820; WBGene00016192; WP:CE01820 WormBase description: C28H8.1 is orthologous to the human gene BCL7A (OMIM:601406), which when mutated leads to high-grade B-cell non-Hodgkin lymphoma.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, IVb male soma enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C29F9.5 C29F9.5 P W All gene names: C29F9.5; 3A735; CE08453; WBGene00016220; WP:CE08453
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Romagnolo et al 2002  Fig3b TF, Shen et                            
                                              al 2005  T1 hif-1 depend hypoxia                                                   

C30G12.7 C30G12.7 P W All gene names: puf-8; C30G12.7; 2H586; CE37486; NM_063122; WBGene00004244; WP:CE37486
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, IVb                             
                                              male soma enriched genes, Wang et al 2003  S7 SAGE                                 
                                              genes in the dataset, Wang et al 2003  S8 SAGE genes in                            
                                              the dauer exit                                                                     

C32H11.1 C32H11.1 P W All gene names: C32H11.1; 4N678; CE19708; WBGene00007864; WP:CE19708
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, wt herm vs wt herm                                    
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

C33A12.4 C33A12.4 P W All gene names: C33A12.4; 4K274; CE05350; WBGene00007883; WP:CE05350
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes                             

C33G3.5 C33G3.5 P W All gene names: C33G3.5; CE34158; WBGene00007905; WP:CE34158; XO694
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

C33G8.4 C33G8.4 P W All gene names: C33G8.4; 5H485; CE06913; WBGene00016362; WP:CE06913
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C35B1.3 C35B1.3 P W All gene names: C35B1.3; 4E845; CE16901; WBGene00016433; WP:CE16901
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C35E7.7 C35E7.7 P W All gene names: C35E7.7; 1L391; CE17520; WBGene00016459; WP:CE17520
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

C36H8.3 C36H8.3 P W All gene names: flp-9; C36H8.3; 4N520; CE39568; NM_070035; WBGene00001452; WP:CE39568 WormBase description: flp-9 encodes a predicted FMRFamide-like peptide neurotransmitter that inhibits action potentials in the pharyngeal muscle when applied to the pharynx of dissected worms and inhibits movement when injected into A. suum; expressed at highest levels prior to adulthood.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, IVb male soma enriched genes, Wang                              
                                              et al 2003  S7 SAGE genes in the dataset, Wang et al                               
                                              2003  S8 SAGE genes in the dauer exit                                              

C37A5.2 C37A5.2 P W All gene names: C37A5.2; 1O749; CE17529; WBGene00007989; WP:CE17529
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, wt herm vs wt herm enriched gen, Reinke et                             
                                              al 2004, IVb male soma enriched genes, Wang et al 2003                             
                                              S3  genes pass one-way ANOVA, Wang et al 2003  S4 Dauer                            
                                              Enriched, Wang et al 2003  S4 genes pass two-wayANOVA                              
                                              P0                                                                                 

C37A5.4 C37A5.4 P W All gene names: C37A5.4; 1O746; CE17530; WBGene00007990; WP:CE17530
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C37H5.10 C37H5.10 P W All gene names: cwp-1; C37H5.10; 5F318; CE08633; NM_071893; WBGene00000859; WP:CE08633 WormBase description: cwp-1 encodes a nematode-specific protein that is coexpressed with lov-1 and pkd-2.
                                              
Member of lists (Publications lists):
                                              Portman et al 2004  T1 newly found                                
                                              ray-genes in25c, Portman et al 2004  T1 25 candidate                               
                                              ray genes, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

C37H5.3 C37H5.3 P W All gene names: C37H5.3; 5F325; CE08627; CE32824; WBGene00016507; WP:CE08627; WP:CE32824
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem3 enriched genes, Reinke                            
                                              et al 2004, IVb male soma enriched genes, Reinke et al                             
                                              2004, mixed sperm soma, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

C39D10.2 C39D10.2 P W All gene names: C39D10.2; CE04181; WBGene00016530; WP:CE04181; XI509
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, wt herm vs wt herm enriched                             
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              Reinke et al 2004, GO categories, Wang et al 2003  S3                              
                                              genes pass one-way ANOVA, Wang et al 2003  S8 SAGE                                 
                                              genes in the dauer exit, Wang et al 2003  S7 SAGE genes                            
                                              in the dataset, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

C39E9.2 C39E9.2 P W All gene names: C39E9.2; 4N829; CE05385; WBGene00008027; WP:CE05385 WormBase description: testis-specific protein TPX-1 like
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, IVb male soma                                    
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C39E9.5 C39E9.5 P W All gene names: C39E9.5; 4N835; CE05388; WBGene00008029; WP:CE05388 WormBase description: testis-specific protein TPX-1 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, wt herm vs wt herm                                    
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C39E9.6 C39E9.6 P W All gene names: C39E9.6; 4N837; CE05389; WBGene00008030; WP:CE05389 WormBase description: testis-specific protein TPX-1 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              herm enriched gen, Reinke et al 2004, IVb male soma                                
                                              enriched genes, Romagnolo et al 2002  Fig3b others,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C41G6.13 C41G6.13 P W All gene names: C41G6.13; 5P689; CE17539; WBGene00008059; WP:CE17539
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C41G7.4 C41G7.4 P W All gene names: tag-328; C41G7.4; 1K97; CE08668; WBGene00008062; WP:CE08668 WormBase description: Drosophila SU(VAR)3-9 protein like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes                                                 

C44B7.6 C44B7.6 P W All gene names: C44B7.6; C44B7.6a.1; C44B7.6a.2; 2H166; CE02544; CE29720; WBGene00016628; WP:CE02544; WP:CE29720
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S4 TransientList, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C45G9.10 C45G9.10 P W All gene names: C45G9.10; 3G148; CE01851; CE37887; WBGene00016681; WP:CE01851; WP:CE37887
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, wt herm vs wt herm enriched                             
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S7 SAGE genes in the dataset, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit                                                    

C46C11.1 C46C11.1 P W All gene names: C46C11.1; CE27859; CE39698; WBGene00016704; WP:CE27859; WP:CE39698; XF261 WormBase description: hormone sensitive lipase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2                                  
                                              Resveratrol regulate WT                                                            

C47D2.1 C47D2.1 P W All gene names: C47D2.1; CE06961; WBGene00016738; WP:CE06961; XI831
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, IVb male soma enriched                                  
                                              genes, Wang et al 2003  S7 SAGE genes in the dataset,                              
                                              Wang et al 2003  S8 SAGE genes in the dauer exit, Zhang                            
                                              et al 2002, T1 mec-3 dependent genes                                               

C47G2.1 C47G2.1 P W All gene names: cut-1; vmp-1; C47G2.1; 2L561; CE02165; NM_064009; WBGene00000851; WP:CE02165 WormBase description: cut-1 encodes a component of cuticlin, an insoluble residue of the nematode cuticle required for alae formation and radial shrinking during dauer differentiation; expressed specifically in the cuticle of dauer larvae and is secreted by the seam cells. WormBase CDS description: cuticulin
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, IVb male soma enriched                                  
                                              genes, Roy et al 2002  S3 muscle genes                                             

C48A7.2 C48A7.2 P W All gene names: C48A7.2; T12B3.F; 4I161; CE20573; WBGene00016739; WP:CE20573 WormBase description: phosphate permease
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, IVb male soma                              
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

C48B4.12 C48B4.12A P W All gene names: C48B4.12; 3K687; CE20576; CE20577; WBGene00008175; WP:CE20576; WP:CE20577
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C48B4.7 C48B4.7 P W All gene names: C48B4.7; 3K648; CE00483; WBGene00008170; WP:CE00483
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

C48B4.9 C48B4.9 P W All gene names: C48B4.9; 3K652; CE00485; WBGene00008172; WP:CE00485
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

C49C3.11 C49C3.11 P W All gene names: C49C3.11; 4S289; CE19750; WBGene00008201; WP:CE19750
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C49C3.12 C49C3.12 P W All gene names: C49C3.12; 4S290; CE19751; WBGene00008202; WP:CE19751 WormBase description: Lectin C-type domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C49C8.6 C49C8.6 P W All gene names: C49C8.6; 4J422; CE35963; WBGene00016770; WP:CE35963
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C49G7.10 C49G7.10 P W All gene names: C49G7.10; 5E512; CE08868; WBGene00016788; WP:CE08868
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Wang et al 2003  S3  genes pass one-way                            
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C50F2.5 C50F2.5 P W All gene names: C50F2.5; 1E464; CE08911; WBGene00016839; WP:CE08911
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, GO                                
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              D, Reinke et al 2004, shared sperm                                                 

C50F4.3 C50F4.3 P W All gene names: tag-329; C50F4.3; 5K15; CE05468; WBGene00008231; WP:CE05468 WormBase description: thiol protease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated, ViswanathanM et al                               
                                              2005  S2 daf-16 Resveratrol                                                        

C52D10.11 C52D10.11 P W All gene names: flp-17; C52D10.11; 4S134; CE17594; NM_070650; WBGene00001460; WP:CE17594
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

C54C6.5 C54C6.5 P W All gene names: C54C6.5; 3E638; CE05496; WBGene00008287; WP:CE05496
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol                                                        

C55A1.6 C55A1.6 P W All gene names: C55A1.6; 5Q121; CE08992; WBGene00008323; WP:CE08992
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Zhang et al 2002, T1 mec-3 dependent genes                              

D1009.4 D1009.4 P W All gene names: nlp-14; D1009.4; CE04288; NM_077107; WBGene00003752; WP:CE04288; XJ536
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

D1022.2 D1022.2 P W All gene names: D1022.2; 2H749; CE02576; WBGene00017021; WP:CE02576
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

D1054.6 D1054.6 P W All gene names: D1054.6; 5L258; WBGene00008373
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

D1081.4 D1081.4 P W All gene names: D1081.4; 1J44; CE28544; WBGene00008382; WP:CE28544 WormBase description: guanine nucleotide binding domains
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

D1086.5 D1086.5 P W All gene names: D1086.5; 5O568; CE09063; WBGene00008392; WP:CE09063
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, list of genes in cluster A, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

D2096.10 D2096.10 P W All gene names: D2096.10; 4J150; CE35264; WBGene00017077; WP:CE35264
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

D2096.5 D2096.5 P W All gene names: D2096.5; 4J124; CE35265; WBGene00017072; WP:CE35265
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

E01G4.5 E01G4.5 P W All gene names: E01G4.5; 2N763; CE23623; WBGene00008447; WP:CE23623
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, mixed oogenesis soma, Reinke et al 2004, IVb                              
                                              male soma enriched genes, Reinke et al 2004, GO                                    
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S8 SAGE genes in the dauer                             
                                              exit, Wang et al 2003  S7 SAGE genes in the dataset                                

E02H9.1 E02H9.1 P W All gene names: E02H9.1; 3D557; CE09118; WBGene00017099; WP:CE09118
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

E02H9.9 E02H9.9 P W All gene names: E02H9.9; 3D556; CE09126; WBGene00017106; WP:CE09126
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

E04F6.9 E04F6.9 P W All gene names: E04F6.9; 2H502; CE01221; WBGene00017128; WP:CE01221
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

EEED8.11 EEED8.11 P W All gene names: EEED8.11; 2F696; CE01884; WBGene00017139; WP:CE01884
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

EEED8.12 EEED8.12 P W All gene names: EEED8.12; 2F700; CE01885; WBGene00017140; WP:CE01885 WormBase description: Probable RNA binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

EEED8.13 EEED8.13 P W All gene names: EEED8.13; 2F702; CE02588; WBGene00017141; WP:CE02588
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes                                              

EEED8.14 EEED8.14 P W All gene names: EEED8.14; 2F704; CE02589; WBGene00017142; WP:CE02589
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, Reinke et al 2004,                               
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

F02E11.5 F02E11.5 P W All gene names: F02E11.5; 2D572; CE09196; WBGene00017183; WP:CE09196
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F02H6.6 F02H6.6 P W All gene names: F02H6.6; 4O992; CE17630; WBGene00008539; WP:CE17630
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F07A11.2 F07A11.2 P W All gene names: F07A11.2; F07A11.2b.1; F07A11.2b.2; F07A11.2b.3; 2L884; CE03144; CE27915; WBGene00008546; WP:CE03144; WP:CE27915 WormBase description: glucosamine-fructose-6-phosphate aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes                                              

F07A5.7 F07A5.7 P W All gene names: unc-15; F07A5.7; F07A5.7.1; F07A5.7.2; F07A5.7.3; F07A5.7.4; 1H954; CE09197; NM_059684; WBGene00006754; WP:CE09197 WormBase description: The unc-15 gene encodes a paramyosin ortholog; UNC-15 protein physically interacts with MHC A, one isoform of myosin heavy chain (MHC) in striated muscle; UNC-15 accumulation is decreased in the absence of UNC-54 (myosin B), implying that degradation of UNC-15 is inhibited by its binding myosin B; conversely, myosin B (but not MYO-3/myosin A) fails to accumulate in unc-15 mutants. WormBase CDS description: paramyosin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Reinke et al 2004, IVb male soma enriched                               
                                              genes, Roy et al 2002  S2 positivecontrol L1 muscle,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F07C3.9 F07C3.9 P W All gene names: F07C3.9; 5J734; CE07030; WBGene00017197; WP:CE07030
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, IVb male soma enriched                                  
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S8 SAGE genes in the dauer exit                                           

F07D3.2 F07D3.2 P W All gene names: flp-6; F07D3.2; 5J953; CE29252; NM_073043; WBGene00001449; WP:CE29252 WormBase description: FMRFAMIDE-related peptide
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F08E10.7 F08E10.7 P W All gene names: F08E10.7; 5R961; CE18577; WBGene00008575; WP:CE18577
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown, Wang et al                              
                                              2003  S4 Climbing, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

F09C3.2 F09C3.2 P W All gene names: F09C3.2; 1O862; CE36126; WBGene00008610; WP:CE36126 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: haloacid dehalogenase-like hydrolase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, Reinke et al 2004, IVb male soma                              
                                              enriched genes, Wang et al 2003  S3  genes pass one-way                            
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F09C6.10 F09C6.10 P W All gene names: F09C6.10; 5R396; CE18583; WBGene00008620; WP:CE18583
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F09E10.7 F09E10.7 P W All gene names: F09E10.7; F09E10.7a.1; F09E10.7a.2; CE34536; CE34537; WBGene00017297; WP:CE34536; WP:CE34537; XC120
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

F09E8.5 F09E8.5 P W All gene names: F09E8.5; 4N929; CE09282; WBGene00008625; WP:CE09282 WormBase description: testis-specific protein TPX-1 like
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, IVb male soma                                    
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F09F7.1 F09F7.1 P W All gene names: F09F7.1; 3G663; CE29258; WBGene00017299; WP:CE29258
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, IVb male soma enriched                                  
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S8 SAGE genes in                               
                                              the dauer exit, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

F11E6.1 F11E6.1 P W All gene names: F11E6.1; 4S421; CE20669; CE26698; CE31166; WBGene00008706; WP:CE20669; WP:CE26698; WP:CE31166 WormBase description: F11E6.1 is homologous to to the human gene GLUCOCEREBROSIDASE (GBA; OMIM:606463), which when mutated leads to Gaucher disease.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, IVb male soma enriched genes, Reinke                            
                                              et al 2004, mixed sperm soma, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

F13A2.5 F13A2.5 P W All gene names: F13A2.5; 5E876; CE09367; WBGene00017414; WP:CE09367
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F13B6.1 F13B6.1 P W All gene names: F13B6.1; 4I223; CE16973; WBGene00017416; WP:CE16973
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster B, Reinke et al 2004, IVb male soma enriched                               
                                              genes, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S3  genes pass one-way ANOVA, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

F13D12.3 F13D12.3 P W All gene names: F13D12.3; 2M11; CE03197; WBGene00008739; WP:CE03197
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F14F11.2 F14F11.2 P W All gene names: F14F11.2; 2I584; CE03210; WBGene00008820; WP:CE03210
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

F15D3.8 F15D3.8 P W All gene names: F15D3.8; 1M174; CE34479; WBGene00008858; WP:CE34479
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F15E6.8 F15E6.8 P W All gene names: F15E6.8; 4F54; CE16997; WBGene00017488; WP:CE16997
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, wt herm vs wt                                
                                              herm enriched gen, Reinke et al 2004, IVb male soma                                
                                              enriched genes                                                                     

F16G10.10 F16G10.10 P W All gene names: F16G10.10; 2C680; CE19399; WBGene00017525; WP:CE19399
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Shen et al 2005  T1 hif-1 depend hypoxia,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F17C11.5 F17C11.5 P W All gene names: F17C11.5; 5L434; CE05652; WBGene00008916; WP:CE05652
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F17E9.1 F17E9.1 P W All gene names: col-116; F17E9.1; 4J123; CE07069; NM_069015; WBGene00000690; WP:CE07069
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F17E9.3 F17E9.3 P W All gene names: F17E9.3; 4J119; CE34817; WBGene00017540; WP:CE34817
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

F18E9.7 F18E9.7 P W All gene names: F18E9.7; CE28823; WBGene00017573; WP:CE28823; XJ214
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F19F10.1 F19F10.1 P W All gene names: F19F10.1; 5I41; CE09481; WBGene00017598; WP:CE09481 WormBase description: DNA-binding protein
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              TF, Reinke et al 2004, wt herm vs wt herm enriched gen,                            
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              IVb male soma enriched genes, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 Dauer                                
                                              Enriched, Wang et al 2003  S4 genes pass two-wayANOVA                              
                                              P0                                                                                 

F19G12.1 F19G12.1 P W All gene names: F19G12.1; CE07084; WBGene00017609; WP:CE07084; XC47
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F19H6.4 F19H6.4 P W All gene names: F19H6.4; CE03235; WBGene00008959; WP:CE03235; XM985 WormBase description: 3-oxo-5-alpha-steroid 4-dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, Reinke et al 2004,                               
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

F19H6.5 F19H6.5 P W All gene names: F19H6.5; CE35497; WBGene00008960; WP:CE35497; XM982
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F19H6.6 F19H6.6 P W All gene names: F19H6.6; CE03237; WBGene00008961; WP:CE03237; XM981
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F20A1.10 F20A1.10 P W All gene names: F20A1.10; F20A1.10.1; F20A1.10.2; 5H534; CE07100; WBGene00017621; WP:CE07100
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F20A1.2 F20A1.2 P W All gene names: F20A1.2; 5H529; CE35280; WBGene00017614; WP:CE35280
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes                                           

F20A1.8 F20A1.8 P W All gene names: F20A1.8; 5H528; CE07098; WBGene00017619; WP:CE07098
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F20G2.4 F20G2.4 P W All gene names: nas-24; F20G2.4; 5O251; CE35860; NM_074008; WBGene00003543; WP:CE35860 WormBase description: zinc metalloprotease
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, wt herm vs wt herm enriched                             
                                              gen, Reinke et al 2004, GO categories, Reinke et al                                
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

F21E9.4 F21E9.4 P W All gene names: F21E9.4; CE09528; WBGene00017668; WP:CE09528; XB962
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F21F3.6 F21F3.6 P W All gene names: F21F3.6; F21F3.6.1; F21F3.6.2; 1F480; CE09536; WBGene00017675; WP:CE09536
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F21H7.4 F21H7.4 P W All gene names: F21H7.4; 5Q715; CE15876; WBGene00009030; WP:CE15876
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F22D6.2 F22D6.2 P W All gene names: F22D6.2; F22D6.2.1; F22D6.2.2; 1H656; CE05683; WBGene00009050; WP:CE05683
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              TF, McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                            
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

F22F1.1 F22F1.1 P W All gene names: hil-3; F22F1.1; H1.3; CE04443; NM_076974; WBGene00001854; WP:CE04443; XI779 WormBase description: histone h1
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, IVb male soma enriched genes                                                 

F25B3.2 F25B3.2 P W All gene names: F25B3.2; 5K57; CE05712; WBGene00009099; WP:CE05712
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Wang et al 2003  S3  genes pass one-way                            
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F25C8.1 F25C8.1 P W All gene names: F25C8.1; 5V378; CE18634; WBGene00009104; WP:CE18634 WormBase description: ACYL-COENZYME A OXIDASE, PEROXISOMAL (EC 1.3.3.6) (PALMITOYL-COA OXIDASE) (AOX)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes                                           

F25E5.3 F25E5.3 P W All gene names: F25E5.3; 5H931; CE07137; WBGene00017784; WP:CE07137
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

F25E5.7 F25E5.7 P W All gene names: F25E5.7; 5H923; CE32875; WBGene00017788; WP:CE32875
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F26A1.12 F26A1.12 P W All gene names: F26A1.12; 3F932; CE02680; WBGene00017810; WP:CE02680
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Adhesion,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F26A3.4 F26A3.4 P W All gene names: F26A3.4; F26A3.4.1; F26A3.4.2; 1I234; CE09669; WBGene00009142; WP:CE09669 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes, Shen                              
                                              et al 2005  T1 hif-1indepen hypoxia, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

F26E4.8 F26E4.8 P W All gene names: tba-1; F26E4.8; F26E4.8.1; F26E4.8.2; 1K362; CE09692; NM_060199; TUBA3; WBGene00006528; WP:CE09692 WormBase description: TBA-2 tubulin alpha-2 chain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes                                              

F26F2.6 F26F2.6 P W All gene names: F26F2.6; 5V43; CE31796; WBGene00009171; WP:CE31796
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F26H11.2 F26H11.3 P W All gene names: nurf-1; F26H11.2; F26H11.2a.1; F26H11.2a.2; 2O693; CE15909; CE15910; CE35294; CE35295; CE35296; CE36931; CE37638; WBGene00009180; WP:CE15909; WP:CE15910; WP:CE35294; WP:CE35295; WP:CE35296; WP:CE36931; WP:CE37638 WormBase description: Bromodomain
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 transient-induction                            
                                              Ethanol-res, McCarroll et al 2004  SFig1-4 conserved w/                            
                                              Drosoph, Reinke et al 2004, IVb male soma enriched                                 
                                              genes                                                                              

F26H11.4 F26H11.4 P W All gene names: F26H11.4; 2O697; CE15911; WBGene00009182; WP:CE15911
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

F28B1.1 F28B1.1 P W All gene names: F28B1.1; 5R517; CE15913; WBGene00009195; WP:CE15913
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

F28B1.6 F28B1.6 P W All gene names: sri-66; F28B1.6; 5R539; CE33629; NM_074920; WBGene00005578; WP:CE33629 WormBase description: 7TM chemoreceptor, sri family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 daf-16 Resveratrol                                                  

F28C6.10 F28C6.10 P W All gene names: F28C6.10; 2I899; CE09747; WBGene00009209; WP:CE09747
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F28D9.1 F28D9.1 P W All gene names: rsr-1; F28D9.1; 1L770; CE30346; CeSRm160; NM_060474; WBGene00004706; WP:CE30346
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, IVb male soma                             
                                              enriched genes                                                                     

F31F6.4 F31F6.4 P W All gene names: flp-8; F31F6.4; CE05776; CE29960; NM_171805; WBGene00001451; WP:CE05776; WP:CE29960; XP501 WormBase description: flp-8 encodes three copies of a FMRFamide-related short peptide neurotransmitter; although the FLP-8 peptide can increase pharyngeal action potential frequency, loss of FLP-8 function does not result in a mutant phenotype, suggesting that FLP-8 may function redundantly with other FMRFamide-like peptides in the nervous system; FLP-8 expression is detected in embryos and larval stages, but not in adults; FLP-8 is expressed in the sensory neurons ASEL/R, URXL/R, and PVM.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F33E11.2 F33E11.2 P W All gene names: F33E11.2; 5A777; CE28293; WBGene00018010; WP:CE28293
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

F33H1.2 F33H1.2 P W All gene names: gpd-4; F33H1.2; F33H1.2.1; F33H1.2.2; 2K461; CE01568; NM_063791; WBGene00001686; WP:CE01568 WormBase description: gpd-4 encodes one of four C. elegans glyceraldehyde-3-phosphate dehydrogenases (GAPDHs); by homology, GPD-4 is predicted to reversibly catalyze the oxidation and phosphorylation of glyceraldehyde-3-phosphate to 1,3-diphosphoglycerate during glycolysis; GPD-4 is required for embryonic and larval development; in C. elegans, GPD-4 and GPD-1 constitute the minor GAPDH isoenzymes and are expressed primarily in embryos, in all cell types. WormBase CDS description: glyceraldehyde 3-phosphate dehydrogenase 4
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, Reinke et al 2004,                               
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

F33H12.5 F33H12.5 P W All gene names: sri-36; F33H12.5; 2C870; CE25868; NM_061899; WBGene00005548; WP:CE25868 WormBase description: 7TM chemoreceptor, sri family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown                                          

F35A5.2 F35A5.2 P W All gene names: F35A5.2; CE04486; WBGene00018025; WP:CE04486; XE425
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

F35D11.7 F35D11.7 P W All gene names: F35D11.7; 2E906; CE32649; WBGene00018047; WP:CE32649
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F35D11.9 F35D11.9 P W All gene names: F35D11.9; 2E910; CE02722; WBGene00018049; WP:CE02722
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F36F12.6 F36F12.6 P W All gene names: F36F12.6; 5C577; CE17786; WBGene00018097; WP:CE17786
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F36G9.11 F36G9.11 P W All gene names: F36G9.11; 5Q453; CE15988; WBGene00009487; WP:CE15988 WormBase description: Lectin C-type domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F36G9.7 F36G9.7 P W All gene names: F36G9.7; 5Q446; CE15984; WBGene00009486; WP:CE15984
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Wang et al 2003  S3  genes pass one-way                            
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

F38E1.10 F38E1.10 P W All gene names: F38E1.10; 5I854; CE04528; WBGene00018182; WP:CE04528
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

F39E9.6 F39E9.6 P W All gene names: F39E9.6; 2D600; CE10108; WBGene00018198; WP:CE10108 WormBase description: F39E9.6 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F39E9.6 has no clear orthologs in other organisms.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F40G9.14 F40G9.14 P W All gene names: F40G9.14; 3A792; CE19861; WBGene00018248; WP:CE19861 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, IVb male soma                              
                                              enriched genes                                                                     

F40G9.7 F40G9.7 P W All gene names: F40G9.7; 3A783; CE19854; WBGene00018243; WP:CE19854
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F41B4.2 F41B4.2 P W All gene names: F41B4.2; F41B4.2b.1; F41B4.2b.2; F41B4.2b.3; CE07212; CE30981; WBGene00018258; WP:CE07212; WP:CE30981; XH450
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes                               

F41B5.5 F41B5.5 P W All gene names: F41B5.5; WBGene00043316
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F42A6.2 F42A6.2 P W All gene names: F42A6.2; 4E105; CE17054; WBGene00018324; WP:CE17054
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown                                          

F42A6.3 F42A6.3 P W All gene names: F42A6.3; 4E87; CE17055; WBGene00018325; WP:CE17055
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

F42G2.6 F42G2.6 P W All gene names: F42G2.6; 2C718; CE32659; WBGene00018355; WP:CE32659
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, GO                            
                                              categories, Reinke et al 2004, IVb male soma enriched                              
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

F42G4.3 F42G4.3 P W All gene names: zyx-1; F42G4.3; F42G4.3a.1; F42G4.3a.2; F42G4.3b.1; F42G4.3b.2; F42G4.4; 2N359; CE20775; CE23716; NM_064375; NM_064376; WBGene00006999; WP:CE20775; WP:CE23716 WormBase description: zyx-1 encodes a zyxin homolog that physically interacts with P granule components (GLH proteins) and that, genetically, is grossly dispensable in vivo (since neither RNAi nor deletion of zyx-1 yields an obvious phenotype); ZYX-1 is potentially orthologous to the human gene LIPOMA-PREFERRED PARTNER (LPP, OMIM:600700). WormBase CDS description: LIM domain containing proteins
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

F43C11.2 F43C11_37.H P W All gene names: F43C11.2; 2C645; CE20784; WBGene00018379; WP:CE20784
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F44C4.5 F44C4.5 P W All gene names: ppt-1; F44C4.5; 5H104; CE07253; NM_072283; WBGene00004092; WP:CE07253 WormBase description: ppt-1 is orthologous to the human gene PALMITOYL-PROTEIN THIOESTERASE 1 (PPT1; OMIM:600722), which when mutated leads to infantile neuronal ceroid lipofuscinosis 1 (OMIM:256730) and juvenile neuronal ceroid lipofuscinosis with granular osmiophilic deposits (OMIM:600680). WormBase CDS description: palmitoyl-protein thioesterase precursor
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, McCarroll et al 2004  SFig1-4 conserved w/                                  
                                              Drosoph, Reinke et al 2004, IVb male soma enriched                                 
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F45D11.C F45D11.C P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, wt herm vs wt herm                                
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F45D11.Q F45D11.Q P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, IVb male soma                             
                                              enriched genes                                                                     

F45D11.R F45D11.R P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, wt herm vs wt herm                                
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F45F2.12 F45F2.12 P W All gene names: his-8; F45F2.12; 5J12; CE10538; NM_072796; WBGene00001882; WP:CE10538 WormBase description: his-8 encodes an H2B histone; his-8 is contained within the histone gene cluster HIS2. WormBase CDS description: histone H2B
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, IVb male soma enriched                               
                                              genes                                                                              

F46A8.3 F46A8.3 P W All gene names: F46A8.3; 1L834; CE10562; WBGene00009746; WP:CE10562 WormBase description: Vertebrate galactoside-binding lectins
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F46B3.14 F46B3.14 P W All gene names: F46B3.14; 5V98; CE18693; WBGene00009765; WP:CE18693
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F46C8.6 F46C8.6 P W All gene names: dpy-7; F46C8.6; F46C8.6.1; F46C8.6.2; CE04580; NM_076873; WBGene00001069; WP:CE04580; XI156 WormBase description: dpy-7 encodes a cuticular collagen; DPY-7 functions as a structural constituent of the extracellular cuticle whose activity is required for normal cuticular morphology and hence, proper body form. WormBase CDS description: cuticle collagen
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T2 xenobiotic                               
                                              induced Collag, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              LateList                                                                           

F47C12.7 F47C12.7 P W All gene names: F47C12.7; 4E754; CE10682; WBGene00018550; WP:CE10682
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F47C12.8 F47C12.8 P W All gene names: F47C12.8; 4E756; CE10684; WBGene00018551; WP:CE10684
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F48C11.3 F48C11.3 P W All gene names: nlp-3; F48C11.3; CE10752; NM_077786; WBGene00003741; WP:CE10752; XN796 WormBase description: nlp-3 encodes a neuropeptide-like protein of the GFxGF family with similarity to orcokinins, highly conserved peptides native to crustaceans that enhance hindgut contractions; NLP-3 is expressed in neurons in the head, pharynx, and vulva, and in the intestine; the precise role of NLP-3 in nervous system function and development is not yet clear.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F49E11.4 F49E11.4 P W All gene names: tag-254; F49E11.4; 4N811; CE10800; WBGene00009890; WP:CE10800 WormBase description: testis-specific protein TPX-1 like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F49E8.2 F49E8.2 P W All gene names: F49E8.2; 4I315; CE28407; WBGene00018636; WP:CE28407
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

F49F1.10 F49F1.10 P W All gene names: F49F1.10; 4E900; CE17093; WBGene00018650; WP:CE17093
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

F49F1.3 F49F1.2 P W All gene names: F49F1.3; 4E879; CE25894; WBGene00018644; WP:CE25894
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F49F1.9 F49F1.9 P W All gene names: F49F1.9; 4E898; CE17092; WBGene00018649; WP:CE17092
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F52D10.3 F52D10.3 P W All gene names: ftt-2; F52D10.3; F52D10.3a.1; F52D10.3a.2; F52D10.3b.1; F52D10.3b.2; CE03389; CE36489; NM_077537; NM_077538; WBGene00001502; WP:CE03389; WP:CE36489; XM222 WormBase description: 14-3-3 protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, IVb male soma enriched                                 
                                              genes                                                                              

F52E4.5 F52E4.5 P W All gene names: F52E4.5; CE07272; WBGene00018702; WP:CE07272; XD704
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              LateList                                                                           

F52F10.3 F52F10.3 P W All gene names: F52F10.3; 5C18; CE19883; WBGene00018707; WP:CE19883
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              neuronal, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster C,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Early genes, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

F53A9.2 F53A9.2 P W All gene names: F53A9.2; CE02762; WBGene00018725; WP:CE02762; XJ329
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, Reinke et al 2004, GO categories, Reinke                              
                                              et al 2004, IVb male soma enriched genes                                           

F53A9.6 F53A9.6 P W All gene names: F53A9.6; F53A9.6.1; F53A9.6.2; CE02766; WBGene00018729; WP:CE02766; XJ332
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig1 aging-regulated                            
                                              genes, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F53A9.7 F53A9.7 P W All gene names: F53A9.7; CE02767; WBGene00018730; WP:CE02767; XJ334
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, list of genes in cluster A, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

F53G12.7 F53G12.7 P W All gene names: col-45; F53G12.7; 1A589; CE11018; NM_058278; WBGene00000622; WP:CE11018 WormBase description: cuticular collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

F53G2.4 F53G2.5 P W All gene names: pqn-42; F53G2.4; 2C744; CE32673; CE32674; NM_061876; NM_061877; WBGene00004129; WP:CE32673; WP:CE32674 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol                                                                        

F54C8.2 F54C8.2 P W All gene names: F54C8.2; 3K519; CE00188; WBGene00010036; WP:CE00188 WormBase description: Histone H3 similarity
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, intrinsic, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, GO                              
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, Reinke et al 2004, IVb male soma enriched genes                                 

F54D10.2 F54D10.2 P W All gene names: fbxa-24; F54D10.2; 2E107; CE32677; WBGene00018803; WP:CE32677
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Lund et al 2002  Fig4 Mount 15, Reinke et al                                
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

F54D8.1 F54D8.1 P W All gene names: dpy-17; F54D8.1; F54D8.1.1; F54D8.1.2; 3G197; CE11066; NM_065685; WBGene00001076; WBGene00018799; WP:CE11066 WormBase description: Uncloned locus that affects body length and outgrowth of posterior canal cell processes.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F54H5.3 F54H5.3 P W All gene names: F54H5.3; 2G913; CE01966; WBGene00018840; WP:CE01966 WormBase description: vesicle-associated membrane protein/synaptobrevin binding protein (weak)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male germline,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt males vs glp4 male enriched ,                                
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, IVb male soma enriched genes                                    

F55A12.6 F55A12.6 P W All gene names: F55A12.6; 1F911; CE36649; WBGene00018865; WP:CE36649
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

F56D2.8 F56D2.8 P W All gene names: F56D2.8; 3G666; CE31006; WBGene00018968; WP:CE31006
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F56D3.1 F56D3.1 P W All gene names: F56D3.1; F56D3.1.1; F56D3.1.2; F56D3.1.3; 2E439; CE29410; WBGene00018969; WP:CE29410
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Reinke et al 2004, IVb male soma enriched                               
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F56D6.6 F56D6.6 P W All gene names: tag-142; F56D6.6; 4E669; CE17910; NM_068033; WBGene00006488; WP:CE17910 WormBase description: 7TM chemoreceptor, srz family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes                                              

F56F3.6 F56F3.6 P W All gene names: Ceinsulin-2; ins-17; F56F3.6; F56F3.6.1; F56F3.6.2; 3F566; CE00681; NM_065510; WBGene00002100; WP:CE00681
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F58A4.1 F58A4.1 P W All gene names: F58A4.1; 3K689; CE20889; WBGene00010226; WP:CE20889
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

F58A4.2 F58A4.2 P W All gene names: F58A4.2; 3K690; CE01017; WBGene00010227; WP:CE01017
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, IVb male                                
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

F58E10.7 F58E10.7 P W All gene names: F58E10.7; 5O473; CE18789; WBGene00010262; WP:CE18789
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown,                                
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

F58H7.2 F58H7.2 P W All gene names: F58H7.2; 4B694; CE34896; WBGene00019068; WP:CE34896 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, Wang et al                               
                                              2003  S4 Early genes, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

F59A1.6 F59A1.6 P W All gene names: F59A1.6; 5S159; CE18790; WBGene00010292; WP:CE18790
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F59A6.3 F59A6.3 P W All gene names: F59A6.3; 2F299; CE01981; WBGene00019085; WP:CE01981 WormBase description: Glycoprotein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

F59B10.4 F59B10.4 P W All gene names: F59B10.4; 2K804; CE35885; CE36941; WBGene00010320; WP:CE35885; WP:CE36941
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Shen et al 2005  T1 hif-1 depend                                   
                                              hypoxia, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F59B2.12 F59B2.12 P W All gene names: F59B2.12; 3K109; CE01024; WBGene00010314; WP:CE01024
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

F59H6.10 F59H6.10 P W All gene names: bath-3; F59H6.10; F59H6.D; 2C316; CE39104; WBGene00019140; WP:CE39104
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

H05L03.3 H05L03.3 P W All gene names: H05L03.3; H05L03.3.1; H05L03.3.2; CE34043; WBGene00019160; WP:CE34043; XG523
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

H09F14.1 H09F14.1 P W All gene names: H09F14.1; 5L92; CE16172; WBGene00010375; WP:CE16172 WormBase description: 7 transmembrane receptor (rhodopsin family)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, IVb male soma enriched genes                                    

H10D18.2 H10D18.E P W All gene names: H10D18.2; 5E293; CE23800; WBGene00019178; WP:CE23800
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Murphy et al 2003  Fig2 Class1 elongate                                    
                                              lifespan, Reinke et al 2004, wt herm vs wt herm                                    
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S8 SAGE genes in the dauer exit, Wang et al                               
                                              2003  S7 SAGE genes in the dataset, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0, Wang et al 2003  S4 Dauer                              
                                              Enriched                                                                           

H17B01.1 Y51H7B_4.A P W All gene names: H17B01.1; 2B799; CE27184; CE27185; WBGene00019207; WP:CE27184; WP:CE27185 WormBase description: sugar transporter
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

JC8.11 JC8.11 P W All gene names: JC8.11; 4N995; CE28343; WBGene00010441; WP:CE28343
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes                                                 

K01C8.3 K01C8.3 P W All gene names: adc-1; tdc-1; K01C8.3; 2I563; CE21011; CE28344; NM_063342; NM_063343; WBGene00006562; WP:CE21011; WP:CE28344 WormBase description: aromatic-L-amino-acid decarboxylase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, IVb male soma enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

K02E7.6 K02E7.6 P W All gene names: K02E7.6; K02E7.6.1; K02E7.6.2; 2B349; CE33417; WBGene00019311; WP:CE33417
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Shen et al 2005  T1 hif-1 depend                                   
                                              hypoxia, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

K03B4.7 K03B4.7 P W All gene names: K03B4.7; K03B4.7a.1; K03B4.7a.2; 5F170; CE28581; CE33133; WBGene00019357; WP:CE28581; WP:CE33133
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, IVb male soma enriched genes, Romagnolo et                             
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

K03B8.2 K03B8.2 P W All gene names: nas-17; K03B8.2; 5L877; CE06076; NM_073491; WBGene00003536; WP:CE06076 WormBase description: zinc metalloprotease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes                                           

K03B8.5 K03B8.5 P W All gene names: nas-19; K03B8.5; 5L878; CE06079; NM_073492; WBGene00003538; WP:CE06079 WormBase description: zinc metalloprotease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes                                           

K03D3.5 K03D3.5 P W All gene names: K03D3.5; 4R80; CE16211; WBGene00010531; WP:CE16211
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

K04C2.3 K04C2.3 P W All gene names: K04C2.3; K04C2.3a.1; K04C2.3a.2; 3H963; CE00721; CE32689; WBGene00019381; WP:CE00721; WP:CE32689
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, IVb male soma enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

K07B1.1 K07B1.1 P W All gene names: try-5; K07B1.1; 5J829; CE35334; NM_073020; WBGene00006623; WP:CE35334
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes                                           

K08C9.6 K08C9.6 P W All gene names: K08C9.6; 1M90; CE21040; WBGene00010653; WP:CE21040
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K08E4.3 K08E4.3 P W All gene names: K08E4.3; 4M821; CE03463; WBGene00010667; WP:CE03463
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

K08F4.3 K08F4.3 P W All gene names: K08F4.3; 4K895; CE06151; WBGene00010678; WP:CE06151 WormBase description: translocon-associated protein
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, list of genes in                            
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, Reinke et al 2004, IVb male soma enriched                               
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

K09C8.2 K09C8.2 P W All gene names: K09C8.2; CE12006; WBGene00010715; WP:CE12006; XL579
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K09D9.1 K09D9.1 P W All gene names: K09D9.1; K09D9.K; 5E499; CE21055; WBGene00019564; WP:CE21055
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, IVb male soma enriched genes                             

K11D12.6 K11D12.6 P W All gene names: K11D12.6; 5F512; CE12136; WBGene00019646; WP:CE12136
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

K11D12.7 K11D12.7 P W All gene names: K11D12.7; K11D12.7.1; K11D12.7.2; 5F514; CE28945; WBGene00019647; WP:CE28945
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol                                                        

K11D12.8 K11D12.8 P W All gene names: K11D12.8; 5F518; CE12140; WBGene00019648; WP:CE12140
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

K11D9.2 K11D9.2 P W All gene names: mca-4; sca-1; ser-1; K11D9.2; K11D9.2a.1; K11D9.2a.2; 3L902; CE18884; CE18885; NM_066984; WBGene00004736; WP:CE18884; WP:CE18885 WormBase description: The sca-1 gene encodes a sarco-endoplasmic reticulum Ca[2+] ATPase homolog that is required for development and muscle function; sca-1 is also a ortholog of human ATP2A1 (OMIM:108730), which when mutated leads to Darier-White disease (OMIM:124200). WormBase CDS description: E1-E2 ATPases
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Roy et al 2002  S3 muscle genes                                    

K11H3.4 K11H3.4 P W All gene names: K11H3.4; 3K925; CE28606; WBGene00010781; WP:CE28606
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

K12H6.5 K12H6.5 P W All gene names: K12H6.5; 2D118; CE20008; WBGene00019685; WP:CE20008
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

K12H6.8 K12H6.8 P W All gene names: K12H6.8; 2D119; CE20011; WBGene00019688; WP:CE20011
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

K12H6.9 K12H6.9 P W All gene names: K12H6.9; 2D115; CE33423; WBGene00019689; WP:CE33423
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

M01D7.5 M01D7.5 P W All gene names: nlp-12; M01D7.5; 1C317; CE12268; NM_058507; WBGene00003750; WP:CE12268 WormBase description: nlp-12 encodes two predicted neuropeptide-like proteins; nlp-12 is part of a LQFamide neuropeptide family that has members in at least one other nematode species; nlp-12 is expressed in one tail neuron; as loss of nlp-12 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of nlp-12-encoded peptides in development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

M03E7.4 M03E7.4 P W All gene names: M03E7.4; 5G92; CE07397; WBGene00019756; WP:CE07397 WormBase description: LDL receptor-related protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, IVb male soma                                    
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

M03F4.2 M03F4.2 P W All gene names: act-4; M03F4.2; M03F4.2a.1; M03F4.2a.2; M03F4.2a.3; M03F4.2b.1; M03F4.2b.2; CE12358; CE28620; CE37134; NM_076440; NM_076441; WBGene00000066; WP:CE12358; WP:CE28620; WP:CE37134; XF583; act4 WormBase description: An actin that is expressed in body wall and vulval muscles and the spermatheca.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt herm enriched                            
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              Roy et al 2002  S2 positivecontrol L1 muscle                                       

M106.2 M106.2 P W All gene names: M106.2; 2L132; CE30680; WBGene00010910; WP:CE30680
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, Reinke et al 2004, IVb male soma enriched                               
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

M163.3 M163.3 P W All gene names: his-24; M163.3; CE12450; HH1; NM_078009; WBGene00001898; WP:CE12450; XP109 WormBase description: The his-24 gene encodes a histone H1 isoform (H1.1) that is essential for chromatin silencing and germline development. WormBase CDS description: histone H1
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              Reinke et al 2004, IVb male soma enriched genes                                    

M176.1 M176.1 P W All gene names: tag-50; M176.1; 2J703; CE12460; WBGene00006429; WP:CE12460 WormBase description: tag-50 encodes a predicted member of the arrestin family.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

M176.10 M176.5 P W All gene names: M176.10; 2J714; CE28946; WBGene00010946; WP:CE28946
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

M60.4 M60.3 P W All gene names: M60.4; M60.4b.1; M60.4b.2; M60.4b.3; M60.4b.4; CE02832; CE34063; WBGene00019780; WP:CE02832; WP:CE34063; XI852
                                              
Member of lists (Publications lists):
                                              McElwee et al 2003  T1 targets of                                 
                                              daf-16, Reinke et al 2004, IVb male soma enriched                                  
                                              genes, Wang et al 2003  S6 removed genes of                                        
                                              contamination                                                                      

M7.10 M7.10 P W All gene names: M7.10; 4L866; CE03490; WBGene00010886; WP:CE03490
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

M7.12 M7.12 P W All gene names: M7.12; 4L860; CE37394; WBGene00010887; WP:CE37394
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, IVb male soma enriched genes, Reinke                            
                                              et al 2004, mixed sperm soma, Reinke et al 2004, list                              
                                              of genes in cluster D, Wang et al 2003  S3  genes pass                             
                                              one-way ANOVA, Wang et al 2003  S4 Early genes, Wang et                            
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

M7.9 M7.9 P W All gene names: M7.9; 4L864; CE12220; WBGene00010885; WP:CE12220
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, wt herm vs wt                                
                                              herm enriched gen, Reinke et al 2004, IVb male soma                                
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

M79.4 M79.4 P W All gene names: flp-19; M79.4; CE18890; NM_077375; WBGene00001462; WP:CE18890; XL223
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

R01E6.5 R01E6.5 P W All gene names: R01E6.5; CE03522; WBGene00010969; WP:CE03522; XO157
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

R03H10.4 R03H10.4 P W All gene names: R03H10.4; 2E458; CE02840; WBGene00019856; WP:CE02840
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

R04B5.4 R04B5.4 P W All gene names: nhr-12; R04B5.4; 5K564; CE06214; NM_073188; WBGene00003611; WP:CE06214 WormBase description: Zinc finger, C4 type (two domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

R04F11.4 R04F11.4 P W All gene names: twk-13; twk-15; R04F11.4; 5M800; CE30561; NM_073690; WBGene00006668; WP:CE30561 WormBase description: twk-13 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; as loss of TWK-13 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of TWK-13 in C. elegans development and/or behavior is not yet known; however, TWK-13 likely functions redundantly with other TWK channels; the TWK-13 expression pattern has not been determined. WormBase CDS description: potassium channel protein
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, wt herm vs wt herm enriched gen, Reinke et                             
                                              al 2004, IVb male soma enriched genes, Wang et al 2003                             
                                              S3  genes pass one-way ANOVA, Wang et al 2003  S4 Dauer                            
                                              Enriched, Wang et al 2003  S4 genes pass two-wayANOVA                              
                                              P0                                                                                 

R05A10.2 R05A10.2 P W All gene names: R05A10.2; 4O943; CE16288; WBGene00011019; WP:CE16288
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes                             

R05D7.1 R05D7.1 P W All gene names: R05D7.1; R05D7.1.1; R05D7.1.2; 1M752; CE32475; WBGene00011026; WP:CE32475
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

R05D8.10 R05D8.B P W All gene names: dhs-15; R05D8.10; 5D246; CE21092; NM_071353; WBGene00000978; WP:CE21092 WormBase description: dhs-15 encodes a member of the short chain dehydrogenase/reductase family. WormBase CDS description: alcohol dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Reinke et al 2004, GO categories,                                  
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S6 removed genes of contamination, Wang et al 2003  S4                             
                                              genes pass two-wayANOVA P0, Wang et al 2003  S4 Dauer                              
                                              Enriched                                                                           

R06C7.8 R06C7.8 P W All gene names: bub-1; R06C7.8; 1H831; CE06251; NM_059650; WBGene00000275; WP:CE06251 WormBase description: bub-1 encodes a serine/threonine kinase orthologous to Saccharomyces cerevisiae BUB1 which is required for proper function of the mitotic spindle assembly checkpoint and human BUB1 (OMIM:602452) which is mutated in some colorectal cancers; BUB-1 activity is required at several stages of development, including embryogenesis; BUB-1 is expressed predominantly in the anterior of the embryo and in hypodermal seam cells during the L1 and L2 larval stages. WormBase CDS description: Eukaryotic protein kinase domain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, Reinke et al 2004, IVb male soma enriched                              
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

R09B5.11 R09B5.11 P W All gene names: R09B5.11; 5B919; CE30296; WBGene00019979; WP:CE30296 WormBase description: sugar transporter
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

R09B5.8 R09B5.8 P W All gene names: cnc-3; R09B5.8; 5B927; CE12632; NM_071016; WBGene00000557; WP:CE12632
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Climbing, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

R09B5.9 R09B5.9 P W All gene names: cnc-4; R09B5.9; 5B925; CE12634; NM_071015; WBGene00000558; WP:CE12634
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Jones et al 2001  T3 20 most abundant                                      
                                              Mixed-stage, Reinke et al 2004, IVb male soma enriched                             
                                              genes                                                                              

R102.1 R102.1 P W All gene names: R102.1; 4L449; CE06329; WBGene00011288; WP:CE06329
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

R102.2 R102.2 P W All gene names: R102.2; 4L453; CE23912; WBGene00011289; WP:CE23912
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

R10D12.1 R10D12.1 P W All gene names: R10D12.1; 5O414; CE12672; WBGene00011185; WP:CE12672 WormBase description: sodium/phosphate transporter
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Shen et al 2005  T1 hif-1 depend                                   
                                              hypoxia, Wang et al 2003  S3  genes pass one-way ANOVA,                            
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

R13A1.8 R13A1.8 P W All gene names: R13A1.8; 4H982; CE04843; WBGene00020045; WP:CE04843
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, GO categories, Reinke                            
                                              et al 2004, list of genes in cluster B, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

R13F6.2 R13F6.2 P W All gene names: R13F6.2; 3H949; CE25085; WBGene00020065; WP:CE25085
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, wt herm vs wt                                
                                              herm enriched gen, Reinke et al 2004, IVb male soma                                
                                              enriched genes                                                                     

R13F6.8 R13F6.8 P W All gene names: R13F6.8; 3H948; CE00795; WBGene00020067; WP:CE00795
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

R193.2 R193.C P W All gene names: R193.2; CE37140; WBGene00020128; WP:CE37140; XB752
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, IVb male soma enriched genes, Wang et al 2003  S4                            
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

R53.8 R53.8 P W All gene names: R53.8; 2K267; CE03578; WBGene00011277; WP:CE03578
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

T01B6.4 T01B6.4 P W All gene names: T01B6.4; CE12884; WBGene00020136; WP:CE12884; XC954
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

T01B7.6 T01B7.6 P W All gene names: T01B7.6; 2J15; CE35362; WBGene00011312; WP:CE35362
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

T01C3.3 T01C3.3 P W All gene names: T01C3.3; 5P472; CE12912; WBGene00011320; WP:CE12912 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, list of genes in                             
                                              cluster E, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

T02D1.6 T02D1.6 P W All gene names: T02D1.6; 4S352; CE30684; WBGene00011372; WP:CE30684 WormBase description: 7 transmembrane receptor (rhodopsin family)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, list of genes in cluster B, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

T02H6.9 T02H6.9 P W All gene names: T02H6.9; T02H6.D; 2A965; CE21145; WBGene00020179; WP:CE21145
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T04A6.1 T04A6.1 P W All gene names: T04A6.1; 3I725; CE31585; CE31586; WBGene00020200; WP:CE31585; WP:CE31586
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T04A6.2 T04A6.2 P W All gene names: T04A6.2; 3I701; CE00758; WBGene00020201; WP:CE00758
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

T04C12.3 T04C12.3 P W All gene names: T04C12.3; T04C12.3.1; T04C12.3.2; 5L544; CE13146; WBGene00011428; WP:CE13146
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T05A10.2 T05A10.2 P W All gene names: clc-4; T05A10.2; CE03634; NM_076856; NM_077399; WBGene00000525; WP:CE03634; XL402 WormBase description: clc-4 encodes a claudin homolog that may be required for normal cohesion of apical junctions in epithelia; CLC-4 is worm-specific, with obvious homologs only in C. elegans; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T05A10.4 T05A10.4 P W All gene names: T05A10.4; CE13187; WBGene00011461; WP:CE13187; XL410 WormBase description: SCP-like extracellular Proteins
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, IVb male soma                                    
                                              enriched genes                                                                     

T05A8.7 T05A8.7 P W All gene names: T05A8.7; 2D32; CE25979; WBGene00020233; WP:CE25979
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

T05D4.1 T05D4.1 P W All gene names: T05D4.1; T05D4.1.1; T05D4.1.2; 3O652; CE16341; WBGene00011474; WP:CE16341 WormBase description: T05D4.1 is orthologous to the human gene ALDOLASE A, FRUCTOSE-BISPHOSPHATE (ALDOA; OMIM:103850), which when mutated leads to aldolase A deficiency. WormBase CDS description: Fructose-bisphosphate aldolase class-I
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

T06G6.4 T06G6.4 P W All gene names: T06G6.4; 1N302; CE13339; WBGene00011546; WP:CE13339
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

T07C4.9 T07C4.9 P W All gene names: nex-2; T07C4.9; T07C4.9b.1; T07C4.9b.2; 3L416; CE23956; CE35364; WBGene00003589; WP:CE23956; WP:CE35364 WormBase description: nex-2 encodes an annexin, a member of a family of calcium-dependent phospholipid binding proteins; by homology, NEX-2 could function in a number of processes, such as membrane fusion, cytoskeletal interactions, and intracellular signaling; however, as loss of nex-2 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of NEX-2 in C. elegans development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, mixed sperm                               
                                              soma, Reinke et al 2004, fem3 enriched genes, Reinke et                            
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

T08A9.3 T08A9.3 P W All gene names: sng-1; T08A9.3; CE21167; NM_076838; WBGene00004912; WP:CE21167; XH947; sng1 WormBase description: synaptogyrin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, IVb male soma                             
                                              enriched genes                                                                     

T08G2.3 T08G2.3 P W All gene names: T08G2.3; T08G2.3.1; T08G2.3.2; CE07473; WBGene00020366; WP:CE07473; XR828 WormBase description: T08G2.3 is orthologous to the human gene ACYL-CoA DEHYDROGENASE, MEDIUM-CHAIN (ACADM; OMIM:607008), which when mutated leads to MCAD deficiency. WormBase CDS description: acyl-CoA dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Reinke et al 2004, GO categories, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

T08H10.1 T08H10.1 P W All gene names: T08H10.1; 5E963; CE17230; WBGene00020369; WP:CE17230 WormBase description: aldose reductase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, list of genes in cluster D, Reinke                              
                                              et al 2004, fem3 enriched genes, Reinke et al 2004, IVb                            
                                              male soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

T10B5.8 T10B5.8 P W All gene names: T10B5.8; 5C323; CE18238; WBGene00020394; WP:CE18238 WormBase description: NADH oxidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, Wang et al                               
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              Dauer Enriched, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

T10D4.7 T10D4.7 P W All gene names: T10D4.7; 2D407; CE20047; WBGene00020409; WP:CE20047
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T13B5.4 T13B5.4 P W All gene names: col-40; T13B5.4; 2B396; CE13609; NM_061512; WBGene00000617; WP:CE13609 WormBase description: col-40 encodes a cuticle collagen protein that belongs to the col-6 cuticle collagen family; col-40 transcript is present in L1 larvae and at the L2d-dauer molt. WormBase CDS description: cuticular collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T13B5.5 T13B5.5 P W All gene names: T13B5.5; 2B398; CE13611; WBGene00020472; WP:CE13611
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes, ViswanathanM                             
                                              et al 2005  S2 daf-16 Resveratrol, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 LateList,                            
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

T14A8.2 T14A8.2 P W All gene names: T14A8.2; 4I586; CE29475; WBGene00020497; WP:CE29475
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T16A1.9 T16A1.9 P W All gene names: T16A1.9; 2C384; WBGene00020538
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, IVb male soma enriched genes                                                 

T16G1.7 T16G1.7 P W All gene names: T16G1.7; 5N414; CE20077; WBGene00011801; WP:CE20077 WormBase description: T16G1.7 is orthologous to the human gene ALIAS DLC1~CANDIDATE TUMOR SUPPRESSOR GENE (DLEC1; OMIM:604050), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, IVb male soma enriched genes                             

T19C9.5 T19C9.5 P W All gene names: T19C9.5; 5R691; CE16422; WBGene00011841; WP:CE16422
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

T20B3.2 T20B3.2 P W All gene names: tni-3; T20B3.2; 5R314; CE20087; NM_074849; WBGene00006585; WP:CE20087 WormBase description: Troponin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T20D3.1 T20D3.1 P W All gene names: T20D3.1; 4K93; CE03670; WBGene00011855; WP:CE03670
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, wt herm vs wt herm enriched                             
                                              gen, Reinke et al 2004, IVb male soma enriched genes                               

T20D4.11 T20D4.11 P W All gene names: T20D4.11; 5D875; CE13800; WBGene00020617; WP:CE13800
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

T21C12.3 T21C12.3 P W All gene names: T21C12.3; 3K628; 3L628; CE26725; WBGene00011899; WP:CE26725
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Wang et al 2003  S5 genes common to feeding                                 
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

T21E8.4 T21E8.4 P W All gene names: T21E8.4; CE06486; WBGene00011902; WP:CE06486; XL503
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol                                                                        

T22B7.3 T22B7.3 P W All gene names: T22B7.3; CE31242; WBGene00020672; WP:CE31242; XG273
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, IVb male soma enriched genes, Romagnolo et al                             
                                              2002  Fig3b Unkown                                                                 

T22F3.3 F40C5.B P W All gene names: T22F3.3; T22F3.3b.1; T22F3.3b.2; 5E63; CE20769; CE24003; WBGene00020696; WP:CE20769; WP:CE24003 WormBase description: T22F3.3 is orthologous to the human gene MUSCLE GLYCOGEN PHOSPHORYLASE (PYGM; OMIM:232600), which when mutated leads to McArdle disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, IVb male                            
                                              soma enriched genes, Reinke et al 2004, GO categories,                             
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T22F3.4 T22F3.4 P W All gene names: rpl-11.1; T22F3.4; T22F3.4.1; T22F3.4.2; 5E64; CE13968; NM_071607; WBGene00004422; WP:CE13968 WormBase description: rpl-11.1 encodes a large ribosomal subunit L11 protein. WormBase CDS description: 60S ribososmal protein L11
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig5                                    
                                              conserved w/ yeast, Reinke et al 2004, Fig2b shared                                
                                              gemlines, Reinke et al 2004, IVb male soma enriched                                
                                              genes, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

T22G5.1 T22G5.1 P W All gene names: T22G5.1; 5O357; CE13982; WBGene00011929; WP:CE13982
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

T23B3.6 T23B3.6 P W All gene names: T23B3.6; 1H284; CE30693; WBGene00020714; WP:CE30693
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Lund et al 2002  Fig4 Mount 15, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol, Wang et al 2003  S7 SAGE                              
                                              genes in the dataset, Wang et al 2003  S8 SAGE genes in                            
                                              the dauer exit                                                                     

T23G4.5 T23G4.5 P W All gene names: T23G4.5; 4O443; CE16457; WBGene00011961; WP:CE16457
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown                                          

T24D8.5 T24D8.5 P W All gene names: nlp-2; T24D8.5; CE05009; NM_076025; WBGene00003740; WP:CE05009; XC960
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005  T3 xenobiotic                               
                                              downregulated, Reinke et al 2004, list of genes in                                 
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

T25G12.5 T25G12.5 P W All gene names: T25G12.5; T25G12.5.1; T25G12.5.2; CE18284; WBGene00020812; WP:CE18284; XR830 WormBase description: acyl-CoA dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T26A8.3 T26A8.3 P W All gene names: T26A8.3; 4J190; CE07549; WBGene00020826; WP:CE07549
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, GO categories, Reinke et al 2004, IVb male soma                              
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol                                                                        

T26E3.6 T26E3.6 P W All gene names: T26E3.6; 1N253; CE14194; WBGene00012039; WP:CE14194 WormBase description: fibrillin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

T27C4.1 T27C4.1 P W All gene names: T27C4.1; T27C4.1.1; T27C4.1.2; 5E192; CE33329; WBGene00020854; WP:CE33329
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

T28A11.19 T28A11.19 P W All gene names: T28A11.19; 5D744; CE14315; WBGene00020881; WP:CE14315
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

T28A11.5 T28A11.5 P W All gene names: T28A11.5; 5D745; CE20110; WBGene00020872; WP:CE20110
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Wang et al 2003  S6 removed genes of                               
                                              contamination                                                                      

T28B8.1 T28B8.1 P W All gene names: T28B8.1; T28B8.1.1; T28B8.1.2; 1I711; CE14329; WBGene00012113; WP:CE14329
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T28B8.2 T28B8.2 P W All gene names: Ceinsulin-1; igf-1; ins-18; T28B8.2; 1I725; CE27217; NM_059830; WBGene00002101; WP:CE27217 WormBase description: The ins-18 gene encodes an insulin/IGF-like peptide that may act in a common pathway with daf-2 to regulate lifespan. WormBase CDS description: insulin-like growth factor I like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T2 lifespan and                                 
                                              Dauer, Murphy et al 2003  Fig2 Class1 elongate                                     
                                              lifespan, Reinke et al 2004, wt herm vs wt herm                                    
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

T28D9.1 T28D9.1 P W All gene names: T28D9.1; T28D9.1.1; T28D9.1.2; 2G783; CE28092; WBGene00020894; WP:CE28092
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

T28F2.3 T28F2.3 P W All gene names: cah-6; T28F2.3; 1E197; CE14355; NM_058788; WBGene00000284; WP:CE14355 WormBase description: cah-6 encodes a predicted carbonic anhydrase. WormBase CDS description: carbonic anhydrase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, GO categories, Reinke et al                                
                                              2004, IVb male soma enriched genes                                                 

T28F4.2 T28F4.2 P W All gene names: asic-2; T28F4.2; 1I59; CE06524; NM_059698; WBGene00012137; WP:CE06524 WormBase description: mechanosensory protein like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster A,                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, IVb male soma enriched genes, Reinke                            
                                              et al 2004, GO categories, ViswanathanM et al 2005  S2                             
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

W01A11.7 W01A11.7 P W All gene names: F46E10.G; W01A11.7; W01A11.7.1; W01A11.7.2; 5G982; CE37796; WBGene00020912; WP:CE37796
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Jones et al 2001  T3 20 most abundant Dauer,                               
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              Romagnolo et al 2002  Fig3b Unkown, Wang et al 2003  S3                            
                                               genes pass one-way ANOVA, Wang et al 2003  S8 SAGE                                
                                              genes in the dauer exit, Wang et al 2003  S7 SAGE genes                            
                                              in the dataset, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

W02A11.8 W02A11.8 P W All gene names: bath-35; W02A11.8; 1N347; CE18993; WBGene00012196; WP:CE18993 WormBase description: BTB (also known as BR-C/Ttk) domain.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, Reinke et al 2004, IVb male soma                              
                                              enriched genes                                                                     

W02D9.10 W02D9.10 P W All gene names: W02D9.10; 1N143; CE14472; WBGene00012216; WP:CE14472
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, Lund et al 2002  Fig4 Mount 15, Reinke et                             
                                              al 2004, list of genes in cluster A, Reinke et al 2004,                            
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt herm enriched gen, Reinke et al 2004, IVb                               
                                              male soma enriched genes, Shen et al 2005  T1                                      
                                              hif-1indepen hypoxia, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol, ViswanathanM et al 2005  Fig6A                                 
                                              Ethanol HS, Wang et al 2003  S3  genes pass one-way                                
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0,                             
                                              Wang et al 2003  S4 Dauer Enriched                                                 

W03D8.8 W03D8.8 P W All gene names: W03D8.8; 1D363; CE36212; WBGene00020989; WP:CE36212
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes, Wang                              
                                              et al 2003  S4 TransientList, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

W04A8.6 W04A8.6 P W All gene names: W04A8.6; 1O451; CE16540; WBGene00012241; WP:CE16540
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

W04G3.8 W04G3.8 P W All gene names: W04G3.8; W04G3.8.1; W04G3.8.2; CE19004; WBGene00012261; WP:CE19004; XL677
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Reinke et al 2004, IVb male soma enriched                               
                                              genes, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 LateList, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

W06G6.11 W06G6.11 P W All gene names: W06G6.11; 5R130; CE20156; WBGene00012313; WP:CE20156
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

W07E11.2 W07E11.2 P W All gene names: flp-3; W07E11.2; CE02373; NM_077293; WBGene00001446; WP:CE02373; XK710 WormBase description: flp-3 encodes nine copies of a GTMRFamide-containing peptide that is predicted to function as a neuropeptide that inhibits pharyngeal action potential in a manner similar to octopamine without having a significant effect on basal resting membrane potential; expressed in three pairs of neurons IL1D, OL1, URB. WormBase CDS description: FMRFamide neuropeptide repeats
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

W07G1.7 W07G1.7 P W All gene names: W07G1.7; 2O256; CE24041; WBGene00012334; WP:CE24041
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

W08F4.7 W08F4.7 P W All gene names: W08F4.7; 2A866; CE39186; WBGene00021096; WP:CE39186
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

W09G10.1 W09G10.1 P W All gene names: col-72; W09G10.1; 2D812; CE28512; NM_062167; WBGene00000648; WP:CE28512 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

W09G10.5 W09G10.5 P W All gene names: W09G10.5; 2D811; CE14772; WBGene00021117; WP:CE14772
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

W09G10.6 W09G10.6 P W All gene names: W09G10.6; 2D809; CE24045; WBGene00021118; WP:CE24045
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

W09G12.7 W09G12.7 P W All gene names: W09G12.7; 4B983; CE18346; WBGene00021121; WP:CE18346
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

W10G11.1 W10G11.1 P W All gene names: W10G11.1; 2D850; CE25157; WBGene00021134; WP:CE25157
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

W10G11.12 W10G11.12 P W All gene names: W10G11.12; 2D869; CE14822; WBGene00021142; WP:CE14822
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

W10G6.3 W10G6.3 P W All gene names: ifa-2; mua-6; W10G6.3; W10G6.3.1; W10G6.3.2; CE18354; Cel IF A2; CelIF a2; NM_078247; WBGene00003485; WP:CE18354; XQ878 WormBase description: mua-6 encodes an essential intermediate filament protein (MUA-6/IFA-2) that is coexpressed with the essential IF protein IFB-1; MUA-6 is required for hypodermal integrity and for lasting attachment of muscles to the body wall; MUA-6 is also required for normal positioning of excretory canals and muscles; MUA-6 forms heteropolymeric intermediate filaments in vitro with an equimolar mixture of IFB-1; mua-6 is transcribed from L1 larval to adult stages; MUA-6 resides in main body hypodermal desmosomes, but not in seam cells. WormBase CDS description: intermediate filament protein
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, IVb male soma enriched                               
                                              genes, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S3  genes pass one-way ANOVA, Wang et al 2003  S4 genes                            
                                              pass two-wayANOVA P0                                                               

Y105C5A.K Y105C5A.K P W
                                              
Member of lists (Publications lists):
  Lund et al 2002  Fig4 Mount 15, Reinke                                 
                                              et al 2004, IVb male soma enriched genes                                           

Y106G6A.4 Y106G6A.4 P W All gene names: Y106G6A.4; 1K509; CE30569; WBGene00013696; WP:CE30569
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, list                              
                                              of genes in cluster D, Reinke et al 2004, shared sperm,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y110A2AL.6 Y110A2A_54.G P W All gene names: Y110A2AL.6; 2D132; CE36029; WBGene00022443; WP:CE36029
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

Y110A2AL.7 Y110A2A_54.F P W All gene names: Y110A2AL.7; 2D134; CE23221; WBGene00022444; WP:CE23221
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, wt herm vs wt herm enriched                             
                                              gen, Reinke et al 2004, IVb male soma enriched genes                               

Y110A2AL.8 Y110A2A_54.I P W All gene names: ptc-3; Y110A2AL.8; 2D136; CE37163; CE37164; NM_061982; NM_061983; WBGene00004210; WP:CE37163; WP:CE37164
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Reinke et al 2004, IVb male soma enriched                               
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              ViswanathanM et al 2005 S2 Resveratrol regulate WT                                 

Y110A7A.2 Y110A7A.S P W All gene names: Y110A7A.2; 1F727; CE30308; WBGene00022454; WP:CE30308
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes                                    

Y113G7B.4 Y113G7B.4 P W All gene names: ftr-1; Y113G7B.4; 5U667; CE23286; WBGene00013756; WP:CE23286 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, Reinke et al 2004,                               
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

Y11D7A.15 Y11D7A.15 P W All gene names: Y11D7A.15; WBGene00012438
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes                                                                

Y11D7A.7 Y11D7A.7 P W All gene names: Y11D7A.7; 4K15; CE20190; WBGene00012431; WP:CE20190
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, Reinke et al 2004,                               
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

Y17G9A.4 Y17G9A.E P W All gene names: Y17G9A.4; 4F624; CE24178; WBGene00021197; WP:CE24178
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              list of genes in cluster D, Reinke et al 2004, fem3                                
                                              enriched genes, Reinke et al 2004, IVb male soma                                   
                                              enriched genes                                                                     

Y18D10A.2 Y18D10A.2 P W All gene names: Y18D10A.2; Y18D10A.C; 1N398; CE21398; WBGene00012475; WP:CE21398
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

Y18D10A.20 Y18D10A.20 P W All gene names: pfn-1; Y18D10A.20; Y18D10A.20.1; Y18D10A.20.2; Y18D10A.T; 1N515; CE21418; NM_060857; WBGene00003989; WP:CE21418 WormBase description: Profilins
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, IVb                             
                                              male soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

Y22F5A.6 Y22F5A.6 P W All gene names: lys-3; Y22F5A.6; 5K762; CE20201; NM_073243; WBGene00003092; WP:CE20201 WormBase description: lys-3 encodes one of a family of ten C. elegans lysozyme genes that are homologous to lysozymes in the amoeboid protozoon Entamoeba histolytica.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y23H5B.4 Y74C10A_158.D P W All gene names: Y23H5B.4; 1D103; CE31098; WBGene00021275; WP:CE31098
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes                                           

Y25C1A.7 Y25C1A.7A P W All gene names: Y25C1A.7; Y25C1A.7a.1; Y25C1A.7a.2; 2D354; CE21475; CE38563; CE38564; WBGene00021294; WP:CE21475; WP:CE38563; WP:CE38564
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

Y26D4A.2 Y26D4A.2 P W All gene names: Y26D4A.2; 1N661; CE36230; WBGene00012500; WP:CE36230
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

Y26D4A.6 Y26D4A.6 P W All gene names: Y26D4A.6; Y26D4A.F; 1N670; CE21487; WBGene00012504; WP:CE21487
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

Y2H9A.3 Y2H9A.3 P W All gene names: col-162; Y2H9.B; Y2H9A.3; 5N923; CE21291; NM_073933; WBGene00000735; WP:CE21291
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T3 20 most abundant                             
                                              Mixed-stage, Reinke et al 2004, list of genes in                                   
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y37E11AR.2 Y37E11A_93.G P W All gene names: Y37E11AR.2; Y37E11A_93.G; 4E511; CE21549; WBGene00021369; WP:CE21549
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, IVb male soma                             
                                              enriched genes                                                                     

Y38E10A.14 Y38E10A.N P W All gene names: Y38E10A.14; 2M914; CE21594; WBGene00012592; WP:CE21594
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, intrinsic, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt herm enriched gen, Reinke et al 2004, IVb                               
                                              male soma enriched genes                                                           

Y38E10A.5 Y38E10A.E P W All gene names: clec-4; Y38E10A.5; 2M868; CE28701; WBGene00012583; WP:CE28701
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster C, Reinke et al 2004,                               
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol                                                                 

Y38E10A.7 Y38E10A.G P W All gene names: Y38E10A.7; 2M897; CE21587; WBGene00012585; WP:CE21587
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes                                           

Y38F1A.5 Y38F1A.5 P W All gene names: cyd-1; Y38F1A.5; Y38F1A.5.1; Y38F1A.5.2; Y38F1A.5.3; 2N281; CE21610; NM_064362; WBGene00000870; WP:CE21610 WormBase description: cyd-1 encodes a cyclin D homolog that is required for escape from G1 cycle arrest in postembryonic blast cells, affects movement and larval viability, and may physically interact with CDK-46 and CKI-1; expressed embryonically primarily in the head, ventral cord, tail, and is later expressed primarily in the seam cells and in the somatic gonad. WormBase CDS description: Cyclins
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              herm enriched gen, Reinke et al 2004, IVb male soma                                
                                              enriched genes                                                                     

Y38F2AR.12 Y38F2A_6126.K P W All gene names: Y38F2AR.12; 4D172; CE21626; WBGene00021430; WP:CE21626
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

Y38F2AR.5 Y38F2A_6126.G P W All gene names: Y38F2AR.5; 4D139; CE37565; WBGene00021423; WP:CE37565
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, IVb male soma enriched genes                                                 

Y39A1A.9 Y39A1A.9 P W All gene names: Y39A1A.9; 3L720; CE38117; WBGene00012648; WP:CE38117
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Reinke et al 2004, IVb male soma enriched                               
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                             
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

Y39A3CL.3 Y39A3C_82.B P W All gene names: Y39A3CL.3; 3C867; CE21651; WBGene00021441; WP:CE21651
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

Y39B6A.20 Y39B6B.G P W All gene names: asp-1; Y39B6A.20; Y39B6A.20.1; Y39B6A.20.2; Y39B6B.G; 5T524; CE21681; NM_171587; WBGene00000214; WP:CE21681 WormBase description: asp-1 encodes a homolog of cathepsin D aspartic protease; it is transcribed exclusively in intestinal cells of the late embryo and early larvae and is not observed in older larvae or adults; ASP-1 is dispensable for neuronal degeneration. WormBase CDS description: peptidase (A1 pepsin family)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes                                                 

Y39C12A.B Y39C12A.B P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, IVb male soma                             
                                              enriched genes                                                                     

Y39G10AR.5 Y39G10A_229.A P W All gene names: Y39G10AR.5; 1C917; CE36737; WBGene00021463; WP:CE36737
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown                                 

Y39G10A_237.A Y39G10A_237.A P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, wt herm vs wt herm                                
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

Y39H10A.4 Y39H10A_225.D P W All gene names: Y39H10A.4; 5E210; CE21781; WBGene00021480; WP:CE21781
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, IVb male soma enriched genes                                                 

Y41C4A.8 Y41C4A.8 P W All gene names: Y41C4A.8; 3M796; CE20248; WBGene00012755; WP:CE20248
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

Y41E3.5 Y41E3.5 P W All gene names: Y41E3.5; 4P771; WBGene00014886
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y43E12A.3 Y43E12A.3 P W All gene names: Y43E12A.3; 4L753; CE16621; WBGene00012795; WP:CE16621 WormBase description: BTB (also known as BR-C/Ttk) domain.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, IVb male                                
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

Y43F8C.1 Y43F8C.1 P W All gene names: nlp-25; Y43F8C.1; 5U81; CE21899; NM_075400; WBGene00003763; WP:CE21899
                                              
Member of lists (Publications lists):
                                              Bishop et al 2004  T4 57 vhl-1 depend                             
                                              hif-1 indep, ReichertK et al 2005  T3 xenobiotic                                   
                                              downregulated, Reinke et al 2004, list of genes in                                 
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Early genes, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

Y43F8C.13 Y43F8C.13 P W All gene names: Y43F8C.13; 5U164; CE21911; WBGene00012834; WP:CE21911 WormBase description: Inosine-uridine preferring nucleoside hydrolase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              herm enriched gen, Reinke et al 2004, IVb male soma                                
                                              enriched genes                                                                     

Y43F8C.16 Y116F11A.ZZ9 P W All gene names: Y43F8C.16; 5U184; CE34118; WBGene00012837; WP:CE34118
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, wt herm vs wt herm                                    
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y43F8C.17 Y43F8C.17 P W All gene names: Y43F8C.17; 5U187; CE21915; WBGene00012838; WP:CE21915
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

Y44A6B.4 Y44A6B.4 P W All gene names: Y44A6B.4; 5V102; CE18387; WBGene00012849; WP:CE18387 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, fem3 enriched genes,                                
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y44A6C.1 Y44A6C.1 P W All gene names: Y44A6C.1; 5V183; CE28852; WBGene00012850; WP:CE28852
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Shen et al 2005  T1 hif-1 depend                                   
                                              hypoxia, Wang et al 2003  S3  genes pass one-way ANOVA,                            
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

Y44E3B.2 Y44E3B.2 P W All gene names: Y44E3B.2; 1D831; CE39838; WBGene00021553; WP:CE39838 WormBase description: tyrosinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, GO categories,                                 
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S6 removed genes of contamination                                         

Y45F10B.1 Y45F10B.1 P W All gene names: tsp-5; Y45F10B.1; 4O352; CE35665; NM_070220; WBGene00006631; WP:CE35665 WormBase description: tetraspanin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

Y46G5A.23 Y46G5.BB P W All gene names: Y46G5A.23; 2N118; CE21968; WBGene00012913; WP:CE21968
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

Y47D3B.2 Y47D3B.2 P W All gene names: nlp-21; Y47D3B.2; 3M478; CE19175; CE24343; NM_067065; NM_067066; WBGene00003759; WP:CE19175; WP:CE24343 WormBase description: nlp-21 encodes nine predicted neuropeptide-like proteins; in C. elegans, nlp-21 is part of the GGARAF neuropeptide family that also contains nlp-9; nlp-21 is expressed in a variety of neurons, including AFD, five head neurons, the ventral nerve cord, one anterior pharyngeal neuron, and one tail neuron; nlp-21 expression is also detected in the embryo and the intestine; as loss of nlp-21 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of nlp-21-encoded peptides in development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

Y47D3B.3 Y47D3B.3 P W All gene names: Y47D3B.3; 3M493; CE37288; WBGene00012940; WP:CE37288
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y47D7A.12 Y47D7A_143.D P W All gene names: Y47D7A.12; 5E908; CE22061; WBGene00021624; WP:CE22061
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y47G6A_240.B Y47G6A_240.B P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, IVb male soma enriched genes                                                 

Y48A6B.4 Y48A6B.4 P W All gene names: Y48A6B.4; 3M96; CE19187; WBGene00012965; WP:CE19187
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

Y48C3A.3 Y48C3A.G P W All gene names: Y48C3A.3; 2N599; CE22138; WBGene00012987; WP:CE22138
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, wt herm vs wt herm enriched                             
                                              gen, Reinke et al 2004, IVb male soma enriched genes                               

Y4C6A.I Y4C6A.I P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, intrinsic, Reinke                               
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, Romagnolo et al                                
                                              2002  Fig3b Unkown                                                                 

Y51A2D.11 Y51A2D.11 P W All gene names: Y51A2D.11; 5T40; CE19207; WBGene00013079; WP:CE19207 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol                                                        

Y51B11A.1 Y51B11A.A P W All gene names: Y51B11A.1; 5I806; CE22326; WBGene00021761; WP:CE22326 WormBase description: reverse transcriptase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol                                                        

Y51H4A.V Y51H4A.V P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, IVb male soma                             
                                              enriched genes                                                                     

Y51H7C.1 Y51H7C_254.B P W All gene names: Y51H7C.1; 2B757; CE22358; WBGene00021779; WP:CE22358
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, IVb male soma                                    
                                              enriched genes                                                                     

Y52B11A.5 Y52B11A.5 P W All gene names: Y52B11A.5; 1L607; CE20294; WBGene00013125; WP:CE20294
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y52D5A.1 Y52D5A.B P W All gene names: Y52D5A.1; 4G229; CE26154; WBGene00021792; WP:CE26154
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes                                                 

Y53F4A.2 Y53F4A.B P W All gene names: Y53F4A.2; 2P160; CE22382; WBGene00013148; WP:CE22382
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, list of                             
                                              genes in cluster order, Reinke et al 2004, wt males vs                             
                                              glp4 male enriched , Reinke et al 2004, IVb male soma                              
                                              enriched genes                                                                     

Y53F4B.21 Y53F4B.AA P W All gene names: Y53F4B.21; 2P389; CE39653; WBGene00013167; WP:CE39653
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, IVb male soma enriched genes                                           

Y53F4B.24 Y53F4C.E P W All gene names: Y53F4B.24; 2P410; CE24419; WBGene00013170; WP:CE24419
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

Y53F4B.28 Y53F4C.I P W All gene names: ptr-20; Y53F4B.28; 2P449; CE24422; NM_064713; WBGene00004234; WP:CE24422
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

Y53F4B.30 Y53F4C.K P W All gene names: gst-27; Y53F4B.30; 2P452; CE22417; NM_064715; WBGene00001775; WP:CE22417 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, IVb male soma enriched genes                               

Y53F4B.35 Y53F4C.P P W All gene names: gst-31; Y53F4B.35; 2P460; CE22421; NM_064720; WBGene00001779; WP:CE22421 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes                                                                

Y53F4C.O Y53F4C.O P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, herm sperm, Reinke                                
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes                                                                

Y53G8AR.3 Y53G8A_1734.D P W All gene names: ral-1; Y53G8AR.3; 3E405; CE25424; NM_065288; WBGene00021811; WP:CE25424
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, herm sperm,                               
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, spermatogenesis enriched genes, Reinke et                              
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes                                                                

Y53G8A_2702.A Y53G8A_2702.A P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, herm sperm, Reinke                                
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes                                                                

Y55B1AR.1 Y55B1A_120.D P W All gene names: lec-6; Y55B1AR.1; Y55B1AR.1.1; Y55B1AR.1.2; 3B218; CE22493; NM_064814; WBGene00002269; WP:CE22493 WormBase description: lec-6 encodes a 'proto' type galectin (beta-galactosyl-binding lectin) containing a single carbohydrate recognition domain; by homology, LEC-6 may play roles in cell adhesion and aggregation, proliferation, or programmed cell death, but as loss of lec-6 activity via large-scale RNAi screens does not result in obvious abnormalities, the precise role of LEC-6 in C. elegans development and/or behavior is not yet known; in vitro, LEC-6 can interact with several types of blood group precursor oligosaccharides and gangliosides.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes                                                 

Y55B1BR.2 Y55B1B_119.C P W All gene names: Y55B1BR.2; 3B57; CE25478; WBGene00021912; WP:CE25478
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes                                              

Y60C6A.1 Y60C6A.1 P W All gene names: Y60C6A.1; Y60C6A.A; 5F261; CE22671; WBGene00022013; WP:CE22671
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Reinke et al 2004, IVb male soma enriched                                  
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S8 SAGE genes in                               
                                              the dauer exit, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

Y63D3A.5 Y63D3A.5 P W All gene names: tfg-1; Y63D3A.5; Y63D3A.5.1; Y63D3A.5.2; 1O695; CE20336; NM_061061; WBGene00006565; WP:CE20336
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

Y64G10A.2 Y64G10A.B P W All gene names: Y64G10A.2; 4P2; CE36246; WBGene00013412; WP:CE36246
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, IVb male soma enriched genes                                                 

Y67D8C.7 Y67D8A_380.D P W All gene names: Y67D8C.7; 4D828; CE39063; WBGene00022071; WP:CE39063
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

Y69H2.3 Y69H2.4 P W All gene names: Y69H2.3; Y69H2.3a.1; Y69H2.3a.2; Y69H2.3d.1; Y69H2.3d.2; 5T136; CE32543; CE32544; CE32545; CE32546; WBGene00013481; WP:CE32543; WP:CE32544; WP:CE32545; WP:CE32546
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

Y71F9B.7 Y71F9B_297.B P W All gene names: plk-2; Y71F9B.7; 1D324; CE22877; NM_058635; WBGene00004043; WP:CE22877
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, Fig2b shared gemlines,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, IVb male soma enriched genes, Reinke                            
                                              et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4                              
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, GO categories                                   

Y71G12B.4 Y71G12A_202.A P W All gene names: Y71G12B.4; 1C283; CE26253; WBGene00022144; WP:CE26253
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y73F4A.3 Y73F4A.3 P W All gene names: Y73F4A.3; 4J804; CE20369; WBGene00013516; WP:CE20369
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

Y73F8A.1 Y73F8A.B P W All gene names: pdk-2; pkd-2; Y73F8A.1; Y73F8A.A; 4P994; CE38663; NM_070437; WBGene00004035; WP:CE38663 WormBase description: pkd-2 encodes an ortholog of human PKD2 (OMIM:173910; mutated in autosomal dominant polycystic kidney disease) that is expressed in the cilia of three types of male-specific sensory neurons and that is required for two aspects of male mating behavior; PKD-2 acts with LOV-1; EGL-44 and EGL-46 regulate cell-specific expression of lov-1 and pkd-2 to specify the behavioral function of the HOB neuron
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              neuronal, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Portman et al 2004 T1 10 previously-known ray                             
                                              gene, Reinke et al 2004, wt herm vs wt herm enriched                               
                                              gen, Reinke et al 2004, IVb male soma enriched genes                               

Y73F8A.10 Y73F8A.I P W All gene names: Y73F8A.10; 4Q61; CE36250; WBGene00013519; WP:CE36250
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

Y75B12B.8 Y75B12B.8 P W All gene names: Y75B12B.8; 5P682; WBGene00013570
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

Y75D11A.3 Y75D11A.C P W All gene names: Y75D11A.3; Y75D11A.C; CE23050; WBGene00022292; WP:CE23050; XC364
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes                                              

Y7A5A.3 Y7A5A.3 P W All gene names: Y7A5A.3; CE38664; WBGene00012409; WP:CE38664; XQ402
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

Y7A9D.1 Y7A9D.1 P W All gene names: Y7A9D.1; 4R146; CE14850; WBGene00012420; WP:CE14850
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

Y82E9BR.6 Y119D3_456.D P W All gene names: Y82E9BR.6; 3C471; CE23391; WBGene00022339; WP:CE23391
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

ZC155.4 ZC155.4 P W All gene names: ZC155.4; 3G302; CE28154; WBGene00022532; WP:CE28154
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

ZC168.4 ZC168.4 P W All gene names: cyb-1; ZC168.4; ZC168.4.1; ZC168.4.2; ZC168.4.3; ZC168.4.4; 4L501; CE06570; NM_069586; WBGene00000865; WP:CE06570 WormBase description: cyb-1 encodes a cyclin B homolog that appears to be required both for embryogenesis (via maternally encoded CYB-1) and for postembryonic development and fertility (via zygotically encoded CYB-1); removing maternal product in cyb-1(RNAi) embryos causes multiple nuclei, and affected embryos arrest development at an early embryonic stage. WormBase CDS description: cyclin
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig2 cyclin-genes,                              
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, IVb male soma                             
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

ZC204.6 ZC204.6 P W All gene names: ZC204.6; 2B934; CE15094; WBGene00022556; WP:CE15094
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

ZC412.3 ZC412.3 P W All gene names: ZC412.3; ZC412.3.1; ZC412.3.2; ZC412.3.3; 5P350; CE15215; WBGene00013884; WP:CE15215
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

ZC416.8 ZC416.8 P W All gene names: cha-1; unc-17; ZC416.8; 4E380; CE17307; CE17308; WBGene00000481; WBGene00006756; WP:CE17307; WP:CE17308 WormBase description: unc-17 encodes a synaptic vesicle acetylcholine transporter (VAChT) highly conserved amongst metazoans including Drosophila and humans (OMIM:600336); UNC-17 is essential for embryonic development, and is required in cholinergic neurons for loading acetylcholine into synaptic vesicles to which UNC-17 is localized; UNC-17 expression may be regulated indirectly by the UNC-4/UNC-37 transcriptional repressor complex, as UNC-17 expression is greatly reduced in unc-4 and unc-37 mutant backgrounds. WormBase CDS description: putative acetylcholine transporter
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

ZK1010.3 ZK1010.3 P W All gene names: ZK1010.3; ZK1010.3.1; ZK1010.3.2; 3O69; CE37862; WBGene00014177; WP:CE37862 WormBase description: FRG1-like actin crosslinking protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

ZK1128.4 ZK1128.4 P W All gene names: ZK1128.4; 3L208; CE01686; WBGene00014230; WP:CE01686
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, IVb                             
                                              male soma enriched genes, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

ZK1248.1 ZK1248.1 P W All gene names: ZK1248.1; 2G133; CE35373; WBGene00022874; WP:CE35373 WormBase description: ZK1248.1 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; ZK1248.1 has no clear orthologs in other organisms.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, wt herm vs wt herm enriched                             
                                              gen, Reinke et al 2004, GO categories, Reinke et al                                
                                              2004, IVb male soma enriched genes                                                 

ZK1290.1 ZK1290.1 P W All gene names: ZK1290.1; 2H851; CE01447; WBGene00022886; WP:CE01447
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

ZK1290.11 ZK1290.11 P W All gene names: ZK1290.11; 2H850; CE02081; WBGene00022892; WP:CE02081
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

ZK287.8 ZK287.8 P W All gene names: her-1; ZK287.8; 5K181; CE06617; CE37304; WBGene00001842; WP:CE06617; WP:CE37304 WormBase description: The autosomal gene her-1 is repressed by SDC-2 to elicit hermaphrodite differentiation; SDC-2 also represses transcription of X chromosomes to achieve dosage compensation.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

ZK39.2 ZK39.2 P W All gene names: ZK39.2; 1L741; CE19313; WBGene00013927; WP:CE19313 WormBase description: Lectin C-type domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

ZK39.3 ZK39.3 P W All gene names: ZK39.3; 1L739; CE19314; WBGene00013928; WP:CE19314 WormBase description: Lectin C-type domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

ZK39.5 ZK39.5 P W All gene names: ZK39.5; 1L743; CE19316; WBGene00013930; WP:CE19316 WormBase description: Lectin C-type domain short and long forms
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

ZK39.8 ZK39.8 P W All gene names: ZK39.8; 1L750; CE19319; WBGene00013933; WP:CE19319 WormBase description: Lectin C-type domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

ZK512.1 ZK512.1 P W All gene names: ZK512.1; 3K205; CE00407; WBGene00013982; WP:CE00407
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

ZK550.6 ZK550.6 P W All gene names: ZK550.6; ZK550.6.1; ZK550.6.2; 4S204; CE20432; WBGene00014000; WP:CE20432 WormBase description: The ZK550.6 gene encodes an ortholog of the human gene PHYTANOYL-COA HYDROXYLASE (PHYH; PAHX; OMIM:602026), which when mutated leads to Refsum disease (OMIM:266500).
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, mixed sperm soma,                            
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes                                                 

ZK792.1 ZK792.1 P W All gene names: ZK792.1; 4M435; CE24739; CE27418; WBGene00014076; WP:CE24739; WP:CE27418 WormBase description: Histidine acid phosphatases
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

ZK822.4 ZK822.4 P W All gene names: ZK822.4; 4M691; CE27357; WBGene00014091; WP:CE27357
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

ZK829.1 ZK829.1 P W All gene names: ZK829.1; 4M704; CE06649; WBGene00014093; WP:CE06649 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, IVb male soma enriched genes                                           

ZK84.1 ZK84.1 P W All gene names: ZK84.1; 2G313; CE02924; WBGene00022649; WP:CE02924
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster C, Reinke et al 2004,                               
                                              IVb male soma enriched genes, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol                                                                 

ZK858.1 ZK858.1 P W All gene names: ZK858.1; 1J699; CE34234; WBGene00014115; WP:CE34234 WormBase description: S.pombe hypothetical protein C12G12.13C like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, GO                              
                                              categories, Reinke et al 2004, IVb male soma enriched                              
                                              genes