Baugh et al 2003, class SM, 3258 genes

Gene list file name:Baugh2003_classSM.txt
Type of gene identifier:Affymetrix custom chip
Description:Baugh et al 2005, Supplymental Dataset, class SM  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

3R5.1 Aff_3R5.1 P W All gene names: 3R5.1; 3O869; CE24758; WBGene00007065; WP:CE24758
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

6R55.2 Aff_6R55.2 P W All gene names: 6R55.2; CE19653; WBGene00007069; WP:CE19653; XS325
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

AC3.1 Aff_AC3.1 P W All gene names: sri-20; AC3.1; 5K849; CE39465; NM_073264; WBGene00005532; WP:CE39465 WormBase description: 7TM chemoreceptor, sri family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

AC3.5 Aff_AC3.5 P W All gene names: AC3.5; 5K873; CE36372; WBGene00007071; WP:CE36372 WormBase description: glutamyl aminopeptidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination                                                                      

AC7.2 Aff_AC7.2 P W All gene names: soc-2; sur-8; AC7.2; AC7.2a.1; AC7.2a.2; 4F892; CE25736; CE31275; NM_171332; WBGene00004929; WP:CE25736; WP:CE31275
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Wang et al 2003  S4 Early genes,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

AC8.10 Aff_AC8.F P W All gene names: AC8.10; WBGene00043988; XA854
AFF_AC8.A Aff_AC8.A P W
AFF_AH6.9 Aff_AH6.9 P W
AFF_B0280.1 Aff_B0280.1 P W
AFF_B0336.5 Aff_B0336.5 P W
AFF_B0391.1 Aff_B0391.1 P W
AFF_B0513.7 Aff_B0513.7 P W
AFF_B0513.9 Aff_B0513.9 P W
AFF_C01G10.4 Aff_C01G10.4 P W
AFF_C02E7.14 Aff_C02E7.14 P W
AFF_C03B1.6 Aff_C03B1.6 P W
AFF_C04F1.2 Aff_C04F1.2 P W
AFF_C04G6.3 Aff_C04G6.3 P W
AFF_C05B5.5 Aff_C05B5.5 P W
AFF_C05C8.1 Aff_C05C8.1 P W
AFF_C05E4.5 Aff_C05E4.5 P W
AFF_C06A1.4 Aff_C06A1.4 P W
AFF_C06E8.1 Aff_C06E8.1 P W
AFF_C07D8.4 Aff_C07D8.4 P W
AFF_C09H5.8 Aff_C09H5.8 P W
AFF_C12D12.6 Aff_C12D12.6 P W
AFF_C13A2.7 Aff_C13A2.7 P W
AFF_C14B1.7 Aff_C14B1.7 P W
AFF_C14B9.3 Aff_C14B9.3 P W
AFF_C15C8.4 Aff_C15C8.4 P W
AFF_C16C2.2 Aff_C16C2.2 P W
AFF_C16C4.2 Aff_C16C4.2 P W
AFF_C16E9.5 Aff_C16E9.5 P W
AFF_C17B7.6 Aff_C17B7.6 P W
AFF_C17F4.4 Aff_C17F4.4 P W
AFF_C17F4.5 Aff_C17F4.5 P W
AFF_C24H11.6 Aff_C24H11.6 P W
AFF_C30A5.9 Aff_C30A5.9 P W
AFF_C30G12.5 Aff_C30G12.5 P W
AFF_C34D4.9 Aff_C34D4.9 P W
AFF_C36B1.3 Aff_C36B1.3 P W
AFF_C43E11.11 Aff_C43E11.11 P W
AFF_C43E11.4 Aff_C43E11.4 P W
AFF_C46F9.1 Aff_C46F9.1 P W
AFF_C47E12.3 Aff_C47E12.3 P W
AFF_C49A9.8 Aff_C49A9.8 P W
AFF_C50D2.5 Aff_C50D2.5 P W
AFF_F10D2.3 Aff_F10D2.3 P W
AFF_F10E9.7 Aff_F10E9.7 P W
AFF_F14D2.10 Aff_F14D2.10 P W
AFF_F15D4.3 Aff_F15D4.3 P W
AFF_F21C10.2 Aff_F21C10.2 P W
AFF_F22B3.6 Aff_F22B3.6 P W
AFF_F23C8.C Aff_F23C8.C P W
AFF_F23C8.I Aff_F23C8.I P W
AFF_F23H12.1 Aff_F23H12.1 P W
AFF_F26A1.5 Aff_F26A1.5 P W
AFF_F26D11.3 Aff_F26D11.3 P W
AFF_F26F4.2 Aff_F26F4.2 P W
AFF_F27C1.6 Aff_F27C1.6 P W
AFF_F28C12.3 Aff_F28C12.3 P W
AFF_F30A10.7 Aff_F30A10.7 P W
AFF_F31E3.6 Aff_F31E3.6 P W
AFF_F35E8.5 Aff_F35E8.5 P W
AFF_F35H12.2 Aff_F35H12.2 P W
AFF_F37B4.8 Aff_F37B4.8 P W
AFF_F39F10.1 Aff_F39F10.1 P W
AFF_F43G6.6 Aff_F43G6.6 P W
AFF_F44F1.1 Aff_F44F1.1 P W
AFF_F45D11_39.C Aff_F45D11_39.C P W
AFF_F46F11.8 Aff_F46F11.8 P W
AFF_F49E8.2 Aff_F49E8.2 P W
AFF_F53F10.3 Aff_F53F10.3 P W
AFF_F55A11.4 Aff_F55A11.4 P W
AFF_F55F1.1 Aff_F55F1.1 P W
AFF_F57C9.3 Aff_F57C9.3 P W
AFF_F58E10.1 Aff_F58E10.1 P W
AFF_F59A1.7 Aff_F59A1.7 P W
AFF_F59E12.3 Aff_F59E12.3 P W
AFF_F59E12.7 Aff_F59E12.7 P W
AFF_H10D18.D Aff_H10D18.D P W
AFF_H12D21.5 Aff_H12D21.5 P W
AFF_H14E04.B Aff_H14E04.B P W
AFF_H24K24.C Aff_H24K24.C P W
AFF_K06B9.4 Aff_K06B9.4 P W
AFF_K07E3.6 Aff_K07E3.6 P W
AFF_K07F5.12 Aff_K07F5.12 P W
AFF_K12D9.2 Aff_K12D9.2 P W
AFF_M03A1.5 Aff_M03A1.5 P W
AFF_M04F3.3 Aff_M04F3.3 P W
AFF_M116.2 Aff_M116.2 P W
AFF_R02F2.2 Aff_R02F2.2 P W
AFF_R05H11.1 Aff_R05H11.1 P W
AFF_R13H4.2 Aff_R13H4.2 P W
AFF_T01B7.1 Aff_T01B7.1 P W
AFF_T01H10.4 Aff_T01H10.4 P W
AFF_T02D1.1 Aff_T02D1.1 P W
AFF_T04G9.3 Aff_T04G9.3 P W
AFF_T05A1.4 Aff_T05A1.4 P W
AFF_T05G5.9 Aff_T05G5.9 P W
AFF_T06C10.5 Aff_T06C10.5 P W
AFF_T07C12.2 Aff_T07C12.2 P W
AFF_T08A9.7 Aff_T08A9.7 P W
AFF_T08D2.G Aff_T08D2.G P W
AFF_T10B10.2 Aff_T10B10.2 P W
AFF_T11G6.8 Aff_T11G6.8 P W
AFF_T12A2.1 Aff_T12A2.1 P W
AFF_T13C5.2 Aff_T13C5.2 P W
AFF_T24D8.2 Aff_T24D8.2 P W
AFF_T27C5.9 Aff_T27C5.9 P W
AFF_T28F3.7 Aff_T28F3.7 P W
AFF_W03G1.6 Aff_W03G1.6 P W
AFF_W03G1.9 Aff_W03G1.9 P W
AFF_W07A8.3 Aff_W07A8.3 P W
AFF_W09G3.4 Aff_W09G3.4 P W
AFF_Y105E8A.J Aff_Y105E8A.J P W
AFF_Y105E8A.R Aff_Y105E8A.R P W
AFF_Y111B2A.P Aff_Y111B2A.P P W
AFF_Y116F11.AA Aff_Y116F11.AA P W
AFF_Y116F11.GG Aff_Y116F11.GG P W
AFF_Y37D8A.19 Aff_Y37D8A.19 P W
AFF_Y37E11A_93.B Aff_Y37E11A_93.B P W
AFF_Y39A1A.17 Aff_Y39A1A.17 P W
AFF_Y39A1A.21 Aff_Y39A1A.21 P W
AFF_Y39A1A.8 Aff_Y39A1A.8 P W
AFF_Y39A3C_82.A Aff_Y39A3C_82.A P W
AFF_Y39A3C_82.B Aff_Y39A3C_82.B P W
AFF_Y39C12.B Aff_Y39C12.B P W
AFF_Y39G10A_246.F Aff_Y39G10A_246.F P W
AFF_Y41D4A_3457.B Aff_Y41D4A_3457.B P W
AFF_Y41D4B_3805.C Aff_Y41D4B_3805.C P W
AFF_Y43F4A.2 Aff_Y43F4A.2 P W
AFF_Y43F4B.7 Aff_Y43F4B.7 P W
AFF_Y46C8_100.A Aff_Y46C8_100.A P W
AFF_Y46H3C_14.F Aff_Y46H3C_14.F P W
AFF_Y47D3A.GG Aff_Y47D3A.GG P W
AFF_Y47G6A_240.D Aff_Y47G6A_240.D P W
AFF_Y47G6A_243.B Aff_Y47G6A_243.B P W
AFF_Y48G1A_53.D Aff_Y48G1A_53.D P W
AFF_Y48G1B_55.A Aff_Y48G1B_55.A P W
AFF_Y48G1C_55.C Aff_Y48G1C_55.C P W
AFF_Y49F6B_110.C Aff_Y49F6B_110.C P W
AFF_Y50D4A_21.B Aff_Y50D4A_21.B P W
AFF_Y50E8A.L Aff_Y50E8A.L P W
AFF_Y51H7B_5.A Aff_Y51H7B_5.A P W
AFF_Y53C10A.F Aff_Y53C10A.F P W
AFF_Y53F4B.S Aff_Y53F4B.S P W
AFF_Y53G8A_2706.C Aff_Y53G8A_2706.C P W
AFF_Y53G8A_9248.A Aff_Y53G8A_9248.A P W
AFF_Y53G8B_93.B Aff_Y53G8B_93.B P W
AFF_Y54E10A_156.D Aff_Y54E10A_156.D P W
AFF_Y54G9A.2 Aff_Y54G9A.2 P W
AFF_Y55B1A_115.D Aff_Y55B1A_115.D P W
AFF_Y55F3A_746.A Aff_Y55F3A_746.A P W
AFF_Y55F3A_746.D Aff_Y55F3A_746.D P W
AFF_Y57E12_242.A Aff_Y57E12_242.A P W
AFF_Y59A8A.D Aff_Y59A8A.D P W
AFF_Y59A8A.K Aff_Y59A8A.K P W
AFF_Y59A8A.L Aff_Y59A8A.L P W
AFF_Y59E9_118.B Aff_Y59E9_118.B P W
AFF_Y59E9_120.D Aff_Y59E9_120.D P W
AFF_Y61A9LA_74.B Aff_Y61A9LA_74.B P W
AFF_Y61A9LA_74.E Aff_Y61A9LA_74.E P W
AFF_Y67D8A_375.B Aff_Y67D8A_375.B P W
AFF_Y67D8A_384.A Aff_Y67D8A_384.A P W
AFF_Y71A12B.C Aff_Y71A12B.C P W
AFF_Y71F9B_287.A Aff_Y71F9B_287.A P W
AFF_Y71G10A_85.A Aff_Y71G10A_85.A P W
AFF_Y71G12A_201.A Aff_Y71G12A_201.A P W
AFF_Y71H2_381.A Aff_Y71H2_381.A P W
AFF_Y73C8B.C Aff_Y73C8B.C P W
AFF_Y73F8A.AA Aff_Y73F8A.AA P W
AFF_Y75D11A_90.C Aff_Y75D11A_90.C P W
AFF_Y76B12C_67.C Aff_Y76B12C_67.C P W
AFF_Y77E11A_3443.D Aff_Y77E11A_3443.D P W
AFF_Y94H6A_148.L Aff_Y94H6A_148.L P W
AFF_Y95B8A_85.C Aff_Y95B8A_85.C P W
AFF_ZC449.3 Aff_ZC449.3 P W
AFF_ZK1127.11 Aff_ZK1127.11 P W
AFF_ZK402.4 Aff_ZK402.4 P W
AFF_ZK546.13 Aff_ZK546.13 P W
AFF_ZK688.5 Aff_ZK688.5 P W
AFF_ZK84.4 Aff_ZK84.4 P W
AFF_ZK970.2 Aff_ZK970.2 P W
AFF_ZK973_14.M Aff_ZK973_14.M P W
AH10.2 Aff_AH10.2 P W All gene names: AH10.2; 5O637; CE07656; WBGene00007083; WP:CE07656
AH10.3 Aff_AH10.3 P W All gene names: AH10.3; 5O622; CE07657; WBGene00007084; WP:CE07657
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

AH10.4 Aff_AH10.4 P W All gene names: AH10.4; 5O616; CE07658; WBGene00007085; WP:CE07658
AH6.1 Aff_AH6.1 P W All gene names: gcy-1; AH6.1; 2J800; CE01450; NM_063638; WBGene00001528; WP:CE01450 WormBase description: gcy-1 is predicted to encode a guanylate cyclase; however, transcriptional fusions of the putative upstream regulatory region with a GFP reporter did not confirm its expression. WormBase CDS description: guanylate cyclase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

AH6.10 Aff_AH6.10 P W All gene names: sra-6; AH6.10; 2J836; CE01451; NM_063651; WBGene00005032; WP:CE01451 WormBase description: 7TM chemoreceptor, sra family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

AH6.11 Aff_AH6.11 P W All gene names: sra-7; AH6.11; 2J833; CE01452; NM_063649; WBGene00005033; WP:CE01452 WormBase description: 7TM chemoreceptor, sra family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

AH6.12 Aff_AH6.12 P W All gene names: sra-8; AH6.12; 2J827; CE01453; NM_063646; WBGene00005034; WP:CE01453 WormBase description: 7TM chemoreceptor, sra family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

AH6.5 Aff_AH6.5 P W All gene names: mex-6; AH6.5; 2J815; CE26846; NM_063642; WBGene00003231; WP:CE26846 WormBase description: mex-6 encodes a CCCH zinc-finger protein highly similar to MEX-5 that functions with MEX-5 to affect embryonic viability, establish soma germline asymmetry in embryos and establish PIE-1, MEX-1, and POS-1 asymmetry in embryos, and also affects formation of intestinal cells; MEX-6 and MEX-5 may act downstream of the PAR proteins. WormBase CDS description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

AH6.8 Aff_AH6.8 P W All gene names: sra-4; AH6.8; 2J830; CE01462; NM_063648; WBGene00005030; WP:CE01462 WormBase description: 7TM chemoreceptor, sra family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

B0001.1 Aff_B0001.1 P W All gene names: B0001.1; 4M899; CE32786; WBGene00007086; WP:CE32786
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, ViswanathanM et al 2005  S2                             
                                              sir-2.1 regulated                                                                  

B0001.2 Aff_B0001.2 P W All gene names: B0001.2; 4M912; CE36776; WBGene00007087; WP:CE36776
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, list of genes in                            
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, herm soma                              
                                              enriched genes, ViswanathanM et al 2005  S2 daf-16                                 
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

B0001.3 Aff_B0001.3 P W All gene names: B0001.3; 4M908; CE29523; WBGene00007088; WP:CE29523
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

B0001.4 Aff_B0001.4 P W All gene names: B0001.4; 4M900; CE37307; WBGene00007089; WP:CE37307 WormBase description: uridine kinase like
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0001.8 Aff_B0001.5 P W All gene names: B0001.8; B0001.8.1; B0001.8.2; B0001.8.3; 4M904; CE31864; WBGene00007093; WP:CE31864
B0024.10 Aff_B0024.10 P W All gene names: B0024.10; B0024.10.1; B0024.10.2; 5K796; CE05154; WBGene00007100; WP:CE05154
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0024.11 Aff_B0024.11 P W All gene names: B0024.11; 5K798; CE05155; WBGene00007101; WP:CE05155 WormBase description: Uncharacterized protein family UPF0024
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

B0024.13 Aff_B0024.13 P W All gene names: B0024.13; 5K803; CE05157; CE35376; WBGene00007102; WP:CE05157; WP:CE35376
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, list                            
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

B0024.15 Aff_B0024.3 P W All gene names: B0024.15; 5K771; CE31280; WBGene00007104; WP:CE31280
B0024.2 Aff_B0024.2 P W All gene names: col-150; B0024.2; 5K774; CE05147; NM_073246; WBGene00000723; WP:CE05147 WormBase description: collagen
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, wt herm vs wt herm                                   
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0024.9 Aff_B0024.9 P W All gene names: B0024.9; B0024.9.1; B0024.9.2; 5K795; CE05153; WBGene00007099; WP:CE05153 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: thioredoxin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

B0025.2 Aff_B0025.3 P W All gene names: csn-2; B0025.2; B0025.2.1; B0025.2.2; B0025.2.3; 1G601; CE27562; NM_059339; WBGene00000814; WP:CE27562 WormBase description: csn-2 encodes a homolog of COP9 signalosome complex subunit 2 that affects embryonic viability and growth rate.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, Fig2b shared                              
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster D, ViswanathanM et al 2005  S2 daf-16                             
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

B0025.4 Aff_B0025.2 P W All gene names: B0025.4; 1G605; CE30120; WBGene00015001; WP:CE30120
B0034.1 Aff_B0034.1 P W All gene names: B0034.1; 2G261; CE39883; WBGene00015002; WP:CE39883
B0034.2 Aff_B0034.2 P W All gene names: B0034.2; 2G232; CE02410; WBGene00015003; WP:CE02410
B0035.1 Aff_B0035.1 P W All gene names: B0035.1; 4M77; CE05159; CE07665; WBGene00007105; WP:CE05159; WP:CE07665 WormBase description: Zinc finger, C2H2 type
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

B0035.12 Aff_B0035.12 P W All gene names: B0035.12; B0035.12.1; B0035.12.2; 4M96; CE05167; WBGene00007111; WP:CE05167 WormBase description: polyadenylate-binding protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

B0035.13 Aff_B0035.13 P W All gene names: B0035.13; 4M70; CE05168; WBGene00007112; WP:CE05168 WormBase description: lipase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0035.15 Aff_B0035.15 P W All gene names: B0035.15; 4M62; CE05170; WBGene00007113; WP:CE05170
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

B0035.16 Aff_B0035.16 P W All gene names: B0035.16; 4M60; CE26926; WBGene00007114; WP:CE26926 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: Haemophilus hypothetical protein HI1074 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0035.2 Aff_B0035.2 P W All gene names: dnj-2; B0035.2; 4M78; CE05160; NM_069725; WBGene00001020; WP:CE05160 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain. WormBase CDS description: DNAJ protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

B0035.3 Aff_B0035.3 P W All gene names: B0035.3; 4M80; CE05161; WBGene00007106; WP:CE05161 WormBase description: viral non-structural protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

B0035.5 Aff_B0035.5 P W All gene names: B0035.5; B0035.5.1; B0035.5.2; 4M83; CE05163; WBGene00007108; WP:CE05163 WormBase description: B0035.5 is orthologous to the human gene GLUCOSE-6-PHOSPHATE DEHYDROGENASE (G6PD; OMIM:305900), which when mutated leads to disease. WormBase CDS description: glucose-6-phosphate-1-dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen                                                                                

B0035.6 Aff_B0035.6 P W All gene names: B0035.6; 4M87; CE20443; WBGene00007109; WP:CE20443
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

B0041.5 Aff_B0041.5 P W All gene names: B0041.5; 1F218; CE29527; WBGene00015009; WP:CE29527
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0041.6 Aff_B0041.6 P W All gene names: ptps-1; B0041.6; 1F220; CE34237; CE39541; WBGene00015010; WP:CE34237; WP:CE39541 WormBase description: B0041.6 is orthologous to the human gene 6-PYRUVOYLTETRAHYDROPTERIN SYNTHASE (PTS; OMIM:261640), which when mutated leads to disease.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

B0047.3 Aff_B0047.3 P W All gene names: bath-24; B0047.3; 2C330; CE07675; WBGene00015014; WP:CE07675
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

B0198.1 Aff_B0198.1 P W All gene names: tsp-20; B0198.1; CE26461; NM_077613; WBGene00006646; WP:CE26461; XM652 WormBase description: tetraspanin
B0205.1 Aff_B0205.1 P W All gene names: B0205.1; 1L292; CE34238; CE36908; WBGene00015017; WP:CE34238; WP:CE36908
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Romagnolo et al 2002                               
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0205.3 Aff_B0205.3 P W All gene names: mcb-1; rpn-10; B0205.3; B0205.3.1; B0205.3.2; 1L308; CE26355; NM_060408; WBGene00004466; WP:CE26355 WormBase description: rpn-10 encodes a protein that contains two ubiquitin interaction motifs and is a member of the von Willebrand factor, type A superfamily similar to the mouse 26S proteasome non-ATP regulatory subunit 4.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes                                                   

B0205.5 Aff_B0205.5 P W All gene names: B0205.5; 1L317; CE39543; WBGene00015020; WP:CE39543
B0205.9 Aff_B0205.9 P W All gene names: B0205.9; 1L299; CE17323; WBGene00015023; WP:CE17323
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

B0207.4 Aff_B0207.4 P W All gene names: air-2; cyk-6; let-603; stu-7; B0207.4; 1G515; CE24761; NM_059313; WBGene00000099; WP:CE24761 WormBase description: air-2 encodes an aurora/Ip11-related serine/threonine protein kinase that affects embryonic viability and chromosome segregation during meiosis and mitosis and is required for cytokinesis; AIR-2 has two functions during mitosis, one in chromosome segregation, and a second, independent function in cytokinesis through ZEN-4; AIR-2 and ZEN-4 may act in parallel to a second pathway that includes CYK-1; AIR-2 phosphorylates two adjacent, evolutionarily conserved C-terminal serines of the inner centromere protein ICP-1; AIR-2 forms a robust complex with CSC-1, BIR-1, and ICP-1; air-2 is expressed highly in embryos, in the mature oocytes, spermatocytes, and extruded polar bodies. WormBase CDS description: protein kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0207.6 Aff_B0207.6 P W All gene names: B0207.6; 1G512; CE30229; WBGene00015029; WP:CE30229
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

B0207.9 Aff_B0207.9 P W All gene names: B0207.9; 1G532; CE07687; WBGene00015032; WP:CE07687
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, fem3                                   
                                              enriched genes                                                                     

B0212.1 Aff_B0212.1 P W All gene names: B0212.1; 4E341; CE16767; WBGene00015035; WP:CE16767
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Wang et al 2003  S4 Climbing,                                
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

B0212.3 Aff_B0212.3 P W All gene names: B0212.3; 4E307; CE16769; WBGene00015037; WP:CE16769
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

B0213.9 Aff_B0213.9 P W All gene names: str-247; B0213.9; 5E429; CE38135; NM_071697; WBGene00006274; WP:CE38135 WormBase description: 7TM chemoreceptor, str family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

B0218.2 Aff_B0218.2 P W All gene names: B0218.2; B0218.2.1; B0218.2.2; 4I919; CE06685; WBGene00015048; WP:CE06685 WormBase description: amidase
B0218.8 Aff_B0218.8 P W All gene names: clec-52; B0218.8; 4I932; CE06691; WBGene00015052; WP:CE06691 WormBase description: 7TM chemoreceptor, clec family
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ReichertK et al 2005  T2 xenobiotic                             
                                              induced C-type, Reinke et al 2004, herm soma enriched                              
                                              genes, ViswanathanM et al 2005  S2 daf-16 Resveratrol                              

B0238.12 Aff_B0238.12 P W All gene names: B0238.12; 5F745; CE07702; WBGene00015076; WP:CE07702
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

B0240.4 Aff_B0240.2 P W All gene names: B0240.4; B0240.4.1; B0240.4.2; 5M212; CE31866; WBGene00007118; WP:CE31866
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Wang et al                               
                                              2003  S5 genes common to feeding ANOVA, Wang et al 2003                            
                                               S3  genes pass one-way ANOVA                                                      

B0244.10 Aff_B0244.7 P W All gene names: B0244.10; 3G825; CE26788; WBGene00015085; WP:CE26788
B0244.8 Aff_B0244.8 P W All gene names: egg-1; B0244.8; 3G819; CE32094; WBGene00015083; WP:CE32094 WormBase description: LDL receptor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, IVb male soma enriched genes, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S6                                 
                                              removed genes of contamination                                                     

B0250.5 Aff_B0250.5 P W All gene names: B0250.5; 5U965; CE18481; WBGene00007122; WP:CE18481 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: 3-HYDROXYISOBUTYRATE DEHYDROGENASE PRECURSOR (EC 1.1.1.31) (HIBADH) (FRAGMENT)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

B0261.1 Aff_B0261.1 P W All gene names: B0261.1; B0261.1.1; B0261.1.2; 1F835; CE29531; WBGene00015091; WP:CE29531
B0261.4 Aff_B0261.4 P W All gene names: B0261.4; 1F813; CE39547; CE39548; WBGene00015092; WP:CE39547; WP:CE39548
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

B0261.7 Aff_B0261.7 P W All gene names: B0261.7; 1F838; CE07709; WBGene00015095; WP:CE07709
B0272.2 Aff_B0272.2 P W All gene names: B0272.2; CE00851; WBGene00007128; WP:CE00851; XK58
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0272.3 Aff_B0272.3 P W All gene names: B0272.3; CE00852; WBGene00007129; WP:CE00852; XK51 WormBase description: 3-hydroxyacyl-CoA dehydrogenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Metabolism,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

B0273.1 Aff_B0273.1 P W All gene names: B0273.1; 4G259; CE16787; WBGene00015097; WP:CE16787
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0273.2 Aff_B0273.2 P W All gene names: puf-7; B0273.2; B0273.2.1; B0273.2.2; 4G253; CE16788; NM_068419; WBGene00004243; WP:CE16788 WormBase description: puf-7 encodes a protein 97% identical to PUF-6 and functions redundantly with the other PUF genes, fbf-1, fbf-2, puf-6, and puf-8, during primordial germ cell development, based on combinatorial RNAi; interacts with NOS-2 in yeast two-hybrid screens.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0273.3 Aff_B0273.3 P W All gene names: B0273.3; 4G250; CE16789; WBGene00015098; WP:CE16789
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched                                                              

B0280.5 Aff_B0280.5 P W All gene names: B0280.5; 3I192; CE31868; WBGene00015102; WP:CE31868 WormBase description: B0280.5 encodes a protein with a chitin binding peritrophin-A domain that is required, in conjunction with CEJ-1, for early embryonic development; B0280.5 mRNA is expressed specifically in the adult hermaphrodite germ line, is a direct target of GLD-1, and has an RNAi phenotype consistent with the hypothesis that B0280.5 is an effector of GLD-1 in the germline.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, IVb male                                
                                              soma enriched genes, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination                                                                      

B0280.7 Aff_B0280.7 P W All gene names: B0280.7; 3I200; CE29535; WBGene00015103; WP:CE29535
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0280.9 Aff_B0280.9 P W All gene names: B0280.9; 3I212; CE00816; WBGene00015104; WP:CE00816
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

B0281.4 Aff_B0281.4 P W All gene names: B0281.4; 2C586; CE32096; WBGene00015111; WP:CE32096
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0285.3 Aff_B0285.3 P W All gene names: B0285.3; 3F432; CE00667; WBGene00007136; WP:CE00667
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0285.5 Aff_B0285.5 P W All gene names: hse-5; B0285.5; 3F435; CE36681; NM_065475; WBGene00002003; WP:CE36681 WormBase description: hse-5 encodes a D-glucuronyl C5-epimerase.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

B0303.11 Aff_B0303.11, Aff_B0303.12 P W All gene names: B0303.11; 3J794; CE39314; WBGene00015131; WP:CE39314
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0303.3 Aff_B0303.3 P W All gene names: B0303.3; B0303.3.1; B0303.3.2; B0303.3.3; 3J774; CE00561; WBGene00015125; WP:CE00561 WormBase description: B0303.3 is orthologous to the human gene 3-KETOACYL-COA THIOLASE BETA-SUBUNIT OF TRIFUNCTIONAL PROTEIN (HADHB; OMIM:143450), which when mutated leads to disease. WormBase CDS description: Acetyl-coa acetyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

B0303.4 Aff_B0303.4 P W All gene names: B0303.4; B0303.4.1; B0303.4.2; 3J781; CE29540; WBGene00015126; WP:CE29540
B0303.9 Aff_B0303.9 P W All gene names: SLP-1; B0303.9; 3J791; CE00539; WBGene00015130; WP:CE00539 WormBase description: SLP-1
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, Reinke et al 2004, fem1 enriched genes,                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0304.2 Aff_B0304.2 P W All gene names: B0304.2; 2E815; CE02424; WBGene00015134; WP:CE02424
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

B0304.4 Aff_B0304.4 P W All gene names: B0304.4; 2E812; CE03872; WBGene00015136; WP:CE03872
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0304.8 Aff_B0304.5 P W All gene names: sra-35; B0304.8; 2E816; CE38021; NM_182233; WBGene00005061; WP:CE38021 WormBase description: 7TM chemoreceptor, sra family
B0334.11 Aff_B0334.11 P W All gene names: mel-19; ooc-3; B0334.11; 2L784; CE19661; CE32788; NM_064055; NM_182110; WBGene00003868; WP:CE19661; WP:CE32788 WormBase description: ooc-3 encodes a nematode-specific protein with a predicted signal sequence, four predicted transmembrane domains, and two putative PEST sequences; OOC-3 is probably localized to the endoplasmic reticulum (ER), and is maternally required for correct localization of PAR-2 and PAR-3 in the P1 blastomere of the two-cell stage embryo; specifically, OOC-3 is required for restricting PAR-3 to the anterior cortex of the P1 blastomere to assure PAR-2 localization at the posterior cortex; more generally, OOC-3 is required to establish asymmetrical anterior-posterior cortical domains and spindle orientation in P1.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0334.2 Aff_B0334.2 P W All gene names: twk-5; B0334.2; 2L774; CE36421; CE37874; WBGene00006660; WP:CE36421; WP:CE37874 WormBase description: twk-5 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; as loss of TWK-5 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of TWK-5 in C. elegans development and/or behavior is not yet known; TWK-5 may, however, function redundantly with other TWK channels; the TWK-5 expression pattern is not yet known.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

B0334.6 Aff_B0334.6 P W All gene names: B0334.6; 2L805; CE30473; WBGene00007146; WP:CE30473 WormBase description: Gonadotropin-releasing hormone receptor like protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0336.7 Aff_B0336.7 P W All gene names: B0336.7; B0336.7b.1; B0336.7b.2; 3G784; CE29546; CE37741; WBGene00015147; WP:CE29546; WP:CE37741
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

B0336.8 Aff_B0336.8 P W All gene names: lgg-3; B0336.8; 3G786; CE00776; NM_065827; WBGene00002982; WP:CE00776 WormBase description: lgg-3 encodes a hydrophilic protein that is orthologous to Saccharomyces cerevisiae autophagy protein Apg12p; by homology, LGG-3 is predicted to function as a modifier protein required for a protein conjugation system essential for autophagy; in the context of this conjugation system, LGG-3 is predicted to interact with Apg7p and Apg5p homologs (encoded by M7.5 and Y71G12B.12a, respectively) to effect bulk degradation of cytoplasmic components under conditions of starvation or cellular remodeling; free LGG-3 is predicted to localize to the cytoplasm, while LGG-3 conjugated to the Apg5p homolog is predicted to associate with membrane compartments; loss of lgg-3 activity via large-scale RNAi screens results in no obvious developmental or behavioral abnormalities.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

B0336.9 Aff_B0336.9 P W All gene names: swp-1; B0336.9; B0336.9b.1; B0336.9b.2; 3G792; CE30068; CE31143; CE31144; CE31145; CE31146; CeSWAP; NM_171132; WBGene00006359; WP:CE30068; WP:CE31143; WP:CE31144; WP:CE31145; WP:CE31146 WormBase description: swp-1 encodes a protein containing two SWAP (Suppressor-of-White-APricot splicing regulator) domains that have been implicated in RNA binding; orthologous to C. briggsae CBG09000.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

B0348.4 Aff_B0348.3 P W All gene names: egl-8; pbo-2; B0348.4; 5A521; CE30588; CE30589; CE36909; WBGene00001177; WP:CE30588; WP:CE30589; WP:CE36909 WormBase description: egl-8 encodes a phospholipase C beta homolog that affects pharyngeal pumping, defecation, and activity levels; it is genetically downstream of egl-30 with respect to aldicarb-induced paralysis, and is expressed in most or all neurons, with the strongest staining in the head and tail ganglia, and in the intestine.
B0348.6 Aff_B0348.6 P W All gene names: ife-3; B0348.6; B0348.6a.1; B0348.6a.2; 5A486; CE17331; CE27570; CE30590; NM_070722; NM_070723; NM_171920; WBGene00002061; WP:CE17331; WP:CE27570; WP:CE30590 WormBase description: ife-3 encodes one of five C. elegans homologs of the mRNA cap-binding protein eIF4E; by homology, IFE-3 is predicted to bind capped mRNA and mediate its recruitment to ribosomes during translation initiation; in vitro, IFE-3 binds a monomethylated guanosine cap structure but does not bind a trimethylated guanosine cap, which suggests that IFE-3 likely mediates translation of those mRNAs that do not contain a spliced-leader sequence; of the C. elegans eIF4E isoforms, IFE-3 is the most similar to human eIF4E and is the only isoform required for viability (homozygous ife-3 mutant embryos arrest in the early division stages of embryogenesis); IFE-3 is enriched in the adult gonad.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

B0361.10 Aff_B0361.8 P W All gene names: B0361.10; CE20451; WBGene00015164; WP:CE20451 WormBase description: synaptobrevin
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

B0361.2 Aff_B0361.1, Aff_B0361.2 P W All gene names: B0361.2; 3I397; CE33549; CE38480; WBGene00015156; WP:CE33549; WP:CE38480
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0361.5 Aff_B0361.5 P W All gene names: psd-1; B0361.5; 3I360; CE37076; CE37696; WBGene00015159; WP:CE37076; WP:CE37696 WormBase description: Phosphatidylserine decarboxylase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

B0361.7 Aff_B0361.7 P W All gene names: B0361.7; 3I374; CE32100; WBGene00015161; WP:CE32100 WormBase description: Acid phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

B0361.9 Aff_B0361.9 P W All gene names: B0361.9; 3I388; CE00838; WBGene00015163; WP:CE00838
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, ViswanathanM et al 2005  S2 sir-2.1 regulated,                             
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S8 SAGE genes in                               
                                              the dauer exit, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

B0365.1 Aff_B0365.1 P W All gene names: B0365.1; 5N599; CE07719; WBGene00007150; WP:CE07719 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: ATP citrate lyase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

B0365.3 Aff_B0365.3 P W All gene names: eat-6; spa-1; B0365.3; B0365.3.1; B0365.3.2; 5N608; CE07721; NM_073868; NaK/1; WBGene00001137; WP:CE07721 WormBase description: eat-6 encodes an ortholog of the alpha subunit of a sodium/potassium ATPase, which in turn affects Na+,K(+)-ATPase activity of membranes by affecting the level of the phosphorylated intermediate of the Na+,K(+)-ATPase; EAT-6 affects relaxation of the pharyngeal muscles, fertility (and thus affects feeding); EAT-6 also affects body length, life span, and ASE, ASI and ASJ axonal outgrowth. WormBase CDS description: Na(+)/K(+) ATPase alpha subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0379.1 Aff_B0379.1 P W All gene names: B0379.1; 1K653; CE20452; WBGene00007155; WP:CE20452
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

B0393.2 Aff_B0393.2 P W All gene names: rbg-3; B0393.2; B0393.2.1; B0393.2.2; 3F845; CE00855; WBGene00007167; WP:CE00855 WormBase description: Probable rabGAP domains
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0393.3 Aff_B0393.3 P W All gene names: B0393.3; 3F849; CE00856; WBGene00007168; WP:CE00856 WormBase description: Leucine Rich Repeat (2 copies) (2 domains)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, Fig2b shared gemlines, Reinke et al 2004, list of                            
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt males vs glp4 male                                    
                                              enriched , Reinke et al 2004, wt herm vs wt male                                   
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

B0393.6 Aff_B0393.6 P W All gene names: B0393.6; 3F870; CE33964; WBGene00007171; WP:CE33964 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

B0393.7 Aff_B0393.7 P W All gene names: B0393.7; 3F868; CE39121; WBGene00007172; WP:CE39121 WormBase description: LDL receptor ligand-binding repeat bearing protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0414.3 Aff_B0414.3 P W All gene names: hil-5; B0414.3; 1G351; CE07733; NM_059277; WBGene00001856; WP:CE07733 WormBase description: histone H1
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0414.6 Aff_B0414.6 P W All gene names: glh-3; B0414.6; 1G370; CE07736; NM_059280; WBGene00001600; WP:CE07736 WormBase description: glh-3 encodes a predicted DEAD-like RNA helicase; GLH-3 interacts with itself and with CSN-5, KGB-1, ZYX-1, and GLH-1 in vitro, and is expressed in association with P granules throughout development. WormBase CDS description: RNA helicase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0432.1 Aff_B0432.1 P W All gene names: B0432.1; 2A589; CE07739; WBGene00015183; WP:CE07739
B0432.13 Aff_B0432.9 P W All gene names: B0432.13; CE29945; WBGene00015194; WP:CE29945
B0454.1 Aff_B0454.1 P W All gene names: B0454.1; 2D349; CE20455; WBGene00015195; WP:CE20455 WormBase description: lin-8 is a class A synthetic multivulva (synMuv) gene that functions redundantly with class B synMuv genes to negatively regulate Ras-mediated signaling during vulval induction.
B0454.6 Aff_B0454.6 P W All gene names: B0454.6; 2D325; CE07756; WBGene00015197; WP:CE07756 WormBase description: amino acid permease
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

B0464.1 Aff_B0464.1 P W All gene names: drs-1; B0464.1; B0464.1.1; B0464.1.2; 3K580; CE00015; NM_066688; WBGene00001094; WP:CE00015 WormBase description: drs-1 encodes a putative aspartyl(D) tRNA synthetase WormBase CDS description: Aspartyl-tRNA synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

B0464.3 Aff_B0464.3 P W All gene names: nlp-36; B0464.3; B0464.3.1; B0464.3.2; 3K579; CE00017; WBGene00007185; WP:CE00017
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0464.4 Aff_B0464.4 P W All gene names: bre-3; B0464.4; B0464.4.1; B0464.4.2; 3K560; CE33592; NM_066686; WBGene00000268; WP:CE33592 WormBase description: bre-3 encodes a protein similar to beta-glycosyltransferases from bacteria that is required for the toxicity of Bacillus thuringiensis Cry5B; BRE-3 may act in a pathway with bre-5 and is expressed and functions in the gut epithelium. WormBase CDS description: zw4
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

B0464.6 Aff_B0464.6 P W All gene names: B0464.6; B0464.6.1; B0464.6.2; B0464.6.3; 3K554; CE33965; WBGene00007186; WP:CE33965
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

B0491.5 Aff_B0491.5 P W All gene names: B0491.5; B0491.5.1; B0491.5.2; B0491.5.3; 2L634; CE02107; WBGene00007192; WP:CE02107
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0491.6 Aff_B0491.6 P W All gene names: B0491.6; B0491.6.1; B0491.6.2; 2L636; CE02108; WBGene00007193; WP:CE02108
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol                                                                 

B0495.8 Aff_B0495.8 P W All gene names: B0495.8; 2H996; CE01766; CE29949; WBGene00015207; WP:CE01766; WP:CE29949
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

B0495.9 Aff_B0495.9 P W All gene names: B0495.9; 2H998; CE01767; WBGene00015208; WP:CE01767
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

B0496.8 Aff_B0496.8 P W All gene names: tag-224; B0496.8; 4I214; CE06720; WBGene00015217; WP:CE06720 WormBase description: LIM-domain protein
B0507.10 Aff_B0507.8 P W All gene names: B0507.10; 5J232; CE28875; WBGene00015227; WP:CE28875
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, wt herm vs wt male enriched gen                                        

B0507.2 Aff_B0507.2 P W All gene names: B0507.2; 5J255; CE32561; WBGene00015219; WP:CE32561
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0511.13 Aff_B0511.8 P W All gene names: B0511.13; 1L210; CE32106; WBGene00015238; WP:CE32106
B0511.4 Aff_B0511.4 P W All gene names: tag-344; B0511.4; 1L223; CE17343; WBGene00015230; WP:CE17343 WormBase description: protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              GO categories, Reinke et al 2004, shared sperm                                     

B0511.7 Aff_B0511.7 P W All gene names: B0511.7; 1L208; CE34246; WBGene00015233; WP:CE34246
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0523.3 Aff_B0523.3, Aff_B0523.4 P W All gene names: pgl-2; B0523.3; 3J758; CE20462; NM_066510; WBGene00003993; WP:CE20462
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0523.5 Aff_B0523.5 P W All gene names: CE-FLI-1; ach-1; fli-1; B0523.5; 3J768; CE36522; NM_066512; WBGene00001443; WP:CE36522 WormBase description: fli-1 encodes a homolog of Drosophila flightless-I; can interact with human Ha-Ras and human actin in vitro; mRNA levels are highest in embryos.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order                                                                      

B0546.1 Aff_B0546.1 P W All gene names: B0546.1; B0546.1.1; B0546.1.2; B0546.1.3; 4E151; CE16792; WBGene00015248; WP:CE16792 WormBase description: ATPase inhibitor
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

B0546.2 Aff_B0546.2 P W All gene names: B0546.2; B0546.2.1; B0546.2.2; 4E138; CE30591; WBGene00015249; WP:CE30591
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

B0546.4 Aff_B0546.4 P W All gene names: B0546.4; 4E148; CE16795; CE33354; WBGene00015251; WP:CE16795; WP:CE33354
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15,                                   
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order, Romagnolo                              
                                              et al 2002  Fig3b Unkown, Romagnolo et al 2002 Fig5                                
                                              genes in let-60 timecour, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

B0554.7 Aff_B0554.7, Aff_B0554.8 P W All gene names: B0554.7; B0554.8; B0554.9; 5A916; CE25744; WBGene00015260; WP:CE25744
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0563.4 Aff_B0563.4 P W All gene names: tag-132; B0563.4; CE30843; WBGene00006479; WP:CE30843; XJ777
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

B0564.11 Aff_B0564.7 P W All gene names: B0564.11; 4N871; CE36970; WBGene00023421; WP:CE36970
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen                                              

B0564.2 Aff_B0564.2 P W All gene names: B0564.2; 4N875; CE05176; WBGene00007202; WP:CE05176
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C01A2.2 Aff_C01A2.2 P W All gene names: C01A2.2; 1N989; CE07784; WBGene00007214; WP:CE07784
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C01A2.3 Aff_C01A2.3 P W All gene names: C01A2.3; 1N981; CE38582; WBGene00007215; WP:CE38582 WormBase description: cytochrome oxidase biogenesis protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, Reinke et al 2004, wt herm vs wt male                                    
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

C01A2.5 Aff_C01A2.5 P W All gene names: C01A2.5; 1N977; CE07787; WBGene00007217; WP:CE07787 WormBase description: S.pombe hypothetical protein C1D4.09C like
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C01B10.8 Aff_C01B10.8 P W All gene names: C01B10.8; C01B10.8.1; C01B10.8.2; 4H401; CE06739; WBGene00015282; WP:CE06739
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C01B10.9 Aff_C01B10.9 P W All gene names: C01B10.9; 4H399; CE37181; WBGene00015283; WP:CE37181
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C01B7.6 Aff_C01B7.6 P W All gene names: rpm-1; rpm-3; sad-3; sam-1; syd-3; C01B7.6; 5J282; CE06730; NM_072866; WBGene00004457; WP:CE06730
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C01B9.1 Aff_C01B9.1 P W All gene names: C01B9.1; 2O67; CE17359; WBGene00007220; WP:CE17359
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C01F1.6 Aff_C01F1.6 P W All gene names: C01F1.6; 2E574; CE39125; WBGene00015301; WP:CE39125
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, list of                             
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C01F6.1 Aff_C01F6.1 P W All gene names: C01F6.1; 4J865; CE02950; WBGene00007221; WP:CE02950
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01F6.4 Aff_C01F6.4 P W All gene names: fem-3; C01F6.4; 4J871; CE02953; NM_069186; WBGene00001413; WP:CE02953 WormBase description: fem-3 encodes a novel protein that promotes male development in all tissues. WormBase CDS description: sex-determining protein (FEM-3)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01G10.10 Aff_C01G10.10 P W All gene names: C01G10.10; 5P562; CE20480; WBGene00007237; WP:CE20480 WormBase description: O-sialoglycoprotein endopeptidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 daf-16                                     
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C01G10.11 Aff_C01G10.11 P W All gene names: unc-76; C01G10.11; C01G10.11a.1; C01G10.11a.2; C01G10.11b.1; C01G10.11b.2; 5P559; CE39210; CE39211; NM_074311; WBGene00006808; WP:CE39210; WP:CE39211 WormBase description: UNC-76 protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C01G10.6 Aff_C01G10.6 P W All gene names: C01G10.6; 5P569; CE07815; WBGene00007233; WP:CE07815
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C01G10.7 Aff_C01G10.7 P W All gene names: C01G10.7; 5P567; CE07816; WBGene00007234; WP:CE07816 WormBase description: citrate lyase beta chain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

C01G5.2 Aff_C01G5.2 P W All gene names: tag-292; C01G5.2; 4H292; CE06748; WBGene00015304; WP:CE06748
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C01G5.4 Aff_C01G5.4 P W All gene names: C01G5.4; 4H299; CE23512; WBGene00015306; WP:CE23512
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 daf-16 Resveratrol                                                     

C01G5.5 Aff_C01G5.5 P W All gene names: C01G5.5; 4H291; CE06751; WBGene00015307; WP:CE06751 WormBase description: aldehyde reductase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01G5.8 Aff_C01G5.8 P W All gene names: C01G5.8; 4H315; CE07800; WBGene00015310; WP:CE07800
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, list of genes in                            
                                              cluster order, Reinke et al 2004, intrinsic, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004,                                
                                              list of genes in cluster E, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C01G6.6 Aff_C01G6.6 P W All gene names: tag-165; C01G6.6; C01G6.6a.1; C01G6.6a.2; C01G6.6a.3; 2J577; CE00868; CE32562; WBGene00006510; WP:CE00868; WP:CE32562 WormBase description: C01G6.6 encodes an ortholog of the human gene METHIONINE SYNTHASE REDUCTASE (MTRR), which when mutated leads to homocystinuria (OMIM:236270)
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 Cytochrome                                
                                              P450, Reinke et al 2004, intrinsic, Reinke et al 2004,                             
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, ViswanathanM et al 2005  S2                               
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Early genes, Wang et                            
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

C01G8.1 Aff_C01G8.1 P W All gene names: C01G8.1; 1F842; CE07801; WBGene00015312; WP:CE07801
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C01G8.3 Aff_C01G8.3 P W All gene names: dhs-1; C01G8.3; 1F848; CE07803; NM_059156; WBGene00000965; WP:CE07803 WormBase description: oxidoreductase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C01G8.4 Aff_C01G8.4 P W All gene names: dnj-4; C01G8.4; 1F850; CE26905; NM_059157; WBGene00001022; WP:CE26905 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C01G8.6 Aff_C01G8.6 P W All gene names: C01G8.6; 1F868; CE07807; WBGene00015313; WP:CE07807
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C02A12.1 Aff_C02A12.1 P W All gene names: gst-33; C02A12.1; 5D946; CE07825; NM_071567; WBGene00001781; WP:CE07825 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C02B10.1 Aff_C02B10.1 P W All gene names: C02B10.1; 4F852; CE16798; IVD; WBGene00015326; WP:CE16798 WormBase description: The C02B10.1 gene encodes an isovaleryl-CoA dehydrogenase; this function has been verified by both sequence homology and direct biochemical assay. WormBase CDS description: acyl-CoA dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C02B10.2 Aff_C02B10.2 P W All gene names: C02B10.2; 4F854; CE24776; WBGene00015327; WP:CE24776
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C02B4.2 Aff_C02B4.2 P W All gene names: nhr-17; C02B4.2; CE02111; NM_077714; WBGene00003616; WP:CE02111; XN280 WormBase description: nhr-17 encodes a member of the superfamily of nuclear receptors, which is one of the most abundant class of transcriptional regulators; nuclear receptors have a well conserved DNA binding domain and a less conserved C-terminal ligand binding domain. WormBase CDS description: nuclear hormone receptor
C02B4.3 Aff_C02B4.3 P W All gene names: C02B4.3; CE02112; WBGene00007259; WP:CE02112; XN276
C02B8.3 Aff_C02B8.3 P W All gene names: C02B8.3; CE03892; WBGene00015322; WP:CE03892; XI757
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C02D5.3 Aff_C02D5.3 P W All gene names: C02D5.3; 3J641; CE39215; CE39216; CE39555; WBGene00015337; WP:CE39215; WP:CE39216; WP:CE39555
C02E7.6 Aff_C02E7.6 P W All gene names: C02E7.6; 5F397; CE07843; WBGene00015339; WP:CE07843
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 Climbing, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C02F4.1 Aff_C02F4.1 P W All gene names: ced-5; C02F4.1; 4L257; CE24779; NM_069537; WBGene00000419; WP:CE24779 WormBase description: The ced-5 gene a homolog of the human protein DOCK180 that is required for the cell engulfment stage of programmed cell death. WormBase CDS description: DOCK180 protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C02F4.2 Aff_C02F4.2 P W All gene names: cna-1; pph-3; pph2B-A; tax-6; C02F4.2; 4L258; CE07853; CE33593; PP2B; WBGene00006527; WP:CE07853; WP:CE33593 WormBase description: tax-6 encodes an ortholog of calcineurin A that is required for inhibition and adaptation of several sensory neurons and for the normal regulation of egg-laying by serotonin; TAX-6 stimulates transcription of rcn-1, and binds RCN-1 protein if free Ca[2+] is present; in general, calcineurin positively regulates calcium-dependent signaling.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster B,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S7 SAGE genes in the dataset, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit                                                    

C02F4.4 Aff_C02F4.4 P W All gene names: C02F4.4; 4L278; CE07855; WBGene00007264; WP:CE07855
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

C02F5.13 Aff_C02F5.3 P W All gene names: C02F5.13; 3J337a; CE36093; WBGene00015353; WP:CE36093
C02F5.4 Aff_C02F5.4 P W All gene names: C02F5.4; 3J335; CE38771; WBGene00015347; WP:CE38771
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C02F5.5 Aff_C02F5.5 P W All gene names: C02F5.5; 3J325; CE00041; WBGene00015348; WP:CE00041
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm                                                                       

C02F5.7 Aff_C02F5.7 P W All gene names: C02F5.7; C02F5.7a.1; C02F5.7a.2; C02F5.7a.3; C02F5.7a.4; C02F5.7b.1; C02F5.7b.2; C30A5.1; CE24780; CE30418; NM_171210; NM_171211; WBGene00015350; WP:CE24780; WP:CE30418 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0, Wang et al 2003  S4                                 
                                              Dauer Enriched                                                                     

C02F5.8 Aff_C02F5.8 P W All gene names: tsp-1; C02F5.8; 3J328; CE00044; NM_066403; WBGene00006627; WP:CE00044 WormBase description: tetraspanin
C02G6.1 Aff_C02G6.1 P W All gene names: C02G6.1; 5G357; CE06755; WBGene00015359; WP:CE06755 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: peptidase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C03A3.2 Aff_C03A3.2 P W All gene names: C03A3.2; C03A3.2.1; C03A3.2.2; CE31404; WBGene00007267; WP:CE31404; XL883
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C03A7.10 Aff_C03A7.10 P W All gene names: srt-65; C03A7.10; 5F644; CE07868; NM_071986; WBGene00015368; WP:CE07868 WormBase description: 7TM chemoreceptor, srt family
C03A7.9 Aff_C03A7.9 P W All gene names: srt-64; C03A7.9; 5F642; CE37951; NM_071985; WBGene00015367; WP:CE37951 WormBase description: 7TM chemoreceptor, srt family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C03B8.1 Aff_C03B8.1 P W All gene names: C03B8.1; 3I805; CE39316; WBGene00015384; WP:CE39316
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, shared sperm, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

C03C10.3 Aff_C03C10.3 P W All gene names: rnr-2; C03C10.3; C03C10.3.1; C03C10.3.2; C03C10.3.3; 3F184; CE00874; NM_065420; WBGene00004392; WP:CE00874 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Ribonuclease-diphosphate reductase M2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, GO                                  
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C03C10.4 Aff_C03C10.4 P W All gene names: C03C10.4; 3F186; CE00875; WBGene00007270; WP:CE00875
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C03C11.1 Aff_C03C11.1 P W All gene names: C03C11.1; 1K591; CE07873; WBGene00007274; WP:CE07873
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, spermatogenesis enriched genes, Reinke et al                              
                                              2004, wt herm vs wt herm enriched gen, Reinke et al                                
                                              2004, fem3 enriched genes, Reinke et al 2004, IVb male                             
                                              soma enriched genes, Reinke et al 2004, wt vs glp-4                                
                                              enriched genes, Reinke et al 2004, list of genes in                                
                                              cluster D, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C03C11.2 Aff_C03C11.2 P W All gene names: fog-3; C03C11.2; 1K593; CE07874; NM_060245; WBGene00001483; WP:CE07874 WormBase description: fog-3 encodes a protein that has similarity, in its N-terminus, to the vertebrate Tob, BTG1, and BTG2 proteins that function in growth control and/or differentiation; in C. elegans, FOG-3 activity is required in the germ line throughout development for initiation and maintenance of spermatogenesis; fog-3 mRNA is expressed at highest levels in the L3, L4, and young adult stages of development, when spermatogenesis occurs; fog-3 transcription appears to be under the control of TRA-1A, which interacts with predicted TRA-1A binding sites in the fog-3 promoter in vitro.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, Fig2b shared                              
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, intrinsic, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster D                                                                 

C03D6.5 Aff_C03D6.5 P W All gene names: C03D6.5; 1K235; CE36095; WBGene00007277; WP:CE36095 WormBase description: anti-silencing protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, Fig2b shared                              
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C03D6.6 Aff_C03D6.6 P W All gene names: C03D6.6; 1K232; CE15580; WBGene00007278; WP:CE15580
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, Fig2b shared gemlines,                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C03E10.3 Aff_C03E10.3 P W All gene names: C03E10.3; 5L767; CE15583; WBGene00007281; WP:CE15583
C03E10.4 Aff_C03E10.4 P W All gene names: gly-20; C03E10.4; 5L765; CE26613; GnT II; MGAT2; NM_073463; WBGene00001645; WP:CE26613 WormBase description: gly-20 is orthologous to the human gene MANNOSYL (ALPHA-1,6-)-GLYCOPROTEIN BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE (MGAT2; OMIM:602616), which when mutated leads to carbohydrate-deficient glycoprotein syndrome, type II. WormBase CDS description: UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C03E10.5 Aff_C03E10.5 P W All gene names: C03E10.5; 5L757; CE15585; WBGene00007282; WP:CE15585
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C03F11.1 Aff_C03F11.1 P W All gene names: C03F11.1; CE03913; WBGene00015387; WP:CE03913; XG9 WormBase description: noninactivating potassium channel (weak)
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S3  genes pass                                   
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

C03H5.3 Aff_C03H5.3 P W All gene names: C03H5.3; 2A677; CE07896; WBGene00015405; WP:CE07896
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C03H5.4 Aff_C03H5.4 P W All gene names: C03H5.4; 2A667; CE07897; WBGene00015406; WP:CE07897 WormBase description: phospholipase
                                              
Member of lists (Publications lists):
                                              Wang et al 2003  S3  genes pass                                   
                                              one-way ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang                            
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

C04A11.2 Aff_C04A11.2 P W All gene names: C04A11.2; CE07904; WBGene00007286; WP:CE07904; XO286
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C04A11.4 Aff_C04A11.4 P W All gene names: adm-2; C04A11.4; CE07906; NM_077890; WBGene00000074; WP:CE07906; XO313 WormBase description: adm-2 encodes a protein containing a snake venom disintegrin-domain and a metalloprotease-like domain (i.e., a protein of the ADAM family); like ADM-1, ADM-2 is homologous to a mammalian sperm glycoprotein (PH-30/fertilin) implicated in sperm-egg fusion, and ADM-2 might thus be a fusogenic protein mediating the merging of plasma membranes during development. WormBase CDS description: zinc metalloprotease
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C04B4.1 Aff_C04B4.1 P W All gene names: C04B4.1; CE05203; WBGene00007289; WP:CE05203; XM899
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C04B4.2 Aff_C04B4.2 P W All gene names: C04B4.2; CE05204; WBGene00007290; WP:CE05204; XM903
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C04C11.2 Aff_C04C11.2 P W All gene names: C04C11.2; C04C11.2.1; C04C11.2.2; CE05210; WBGene00007296; WP:CE05210; XO655
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B                                                                          

C04C3.3 Aff_C04C3.3 P W All gene names: C04C3.3; C04C3.3.1; C04C3.3.2; 4E167; CE27647; WBGene00015413; WP:CE27647 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: pyruvate dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C04D8.1 Aff_C04D8.1 P W All gene names: C04D8.1; 3J607; CE33028; CEGAP; WBGene00015418; WP:CE33028 WormBase description: GTPase-activating protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C04E6.11 Aff_C04E6.11 P W All gene names: C04E6.11; 5G396; CE36911; WBGene00015425; WP:CE36911
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, herm soma enriched genes, Wang et al 2003  S4                                
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

C04F12.1 Aff_C04F12.1 P W All gene names: C04F12.1; 1K250; CE19674; WBGene00007297; WP:CE19674
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C04F12.5 Aff_C04F12.5 P W All gene names: C04F12.5; 1K264; CE19678; WBGene00007299; WP:CE19678
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, list                            
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C04F5.1 Aff_C04F5.1 P W All gene names: rsd-8; sid-1; C04F5.1; 5F603; CE30331; NM_071971; WBGene00004795; WP:CE30331 WormBase description: The sid-1 gene encodes a predicted transmembrane protein with conserved human (OMIM:606816) and mouse homologs of unknown function and is required cell autonomously for systemic RNA interference (RNAi); a SID-1::GFP fusion is enriched at the cell periphery of most nonneuronal cells from late embryogenesis through adulthood with highest levels detected in cells exposed to the environment.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              F, Reinke et al 2004, fem1 enriched genes, Reinke et al                            
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, mixed oogenesis soma, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated                                                                  

C04G2.8 Aff_C04G2.8 P W All gene names: C04G2.8; 4K876; CE05216; WBGene00007307; WP:CE05216
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C04G6.4 Aff_C04G6.4 P W All gene names: C04G6.4; 2F372; CE32112; WBGene00015454; WP:CE32112 WormBase description: salt-stress induced peptide
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C04G6.5 Aff_C04G6.5 P W All gene names: C04G6.5; 2F377; CE06766; WBGene00015455; WP:CE06766 WormBase description: salt-stress induced peptide
C04H5.6 Aff_C04H5.6 P W All gene names: mog-4; C04H5.6; 2O840; CE15592; NM_064626; WBGene00003392; WP:CE15592 WormBase description: The mog-4 gene encodes a DEAH helicase orthologous to the Drosophila CG10689 and the S. cerevisiae PRP2 proteins. WormBase CDS description: Helicases conserved C-terminal domain
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes                                      

C05A9.1 Aff_C05A9.1 P W All gene names: pgp-5; C05A9.1; CE05221; NM_077409; WBGene00003999; WP:CE05221; XL474 WormBase description: pgp-5 encodes a transmembrane protein that is a member of the P-glycoprotein subclass of the ATP-binding cassette (ABC) transporter superfamily; by homology, PGP-5 is predicted to function as an ATP-dependent efflux pump that protects C. elegans by exporting exogenous toxins; however, as loss of pgp-5 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of PGP-5 in C. elegans development and/or behavior is not yet known. WormBase CDS description: p-glycoprotein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C05B10.1 Aff_C05B10.1 P W All gene names: lip-1; C05B10.1; 4H607; CE31151; NM_068652; WBGene00003043; WP:CE31151 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

C05C10.3 Aff_C05C10.3 P W All gene names: C05C10.3; C05C10.3.1; C05C10.3.2; C05C10.3.3; 2K226; CE01467; WBGene00007330; WP:CE01467 WormBase description: C05C10.3 is orthologous to the human gene 3-OXOACID COA TRANSFERASE (also called succinyl-CoA:3-ketoacid CoA transferase; OXCT; OMIM:245050), which when mutated leads to episodic ketoacidosis. WormBase CDS description: 3-oxoacid CoA-transferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen                                                                  

C05C10.5 Aff_C05C10.5 P W All gene names: C05C10.5; C05C10.5c.1; C05C10.5c.2; C05C10.5c.3; 2K235; CE01469; CE35822; CE39217; WBGene00007332; WP:CE01469; WP:CE35822; WP:CE39217
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, fem1 enriched genes, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C05C10.6 Aff_C05C10.6 P W All gene names: C05C10.6; CE02113; CE27796; WBGene00007333; WP:CE02113; WP:CE27796 WormBase description: phospholipase activating protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen                                                       

C05D11.1 Aff_C05D11.1 P W All gene names: C05D11.1; 3H529; CE03926; WBGene00015481; WP:CE03926
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C05D11.10 Aff_C05D11.10 P W All gene names: C05D11.10; 3H520; CE01129; MRPS17; WBGene00015487; WP:CE01129
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C05D11.11 Aff_C05D11.11 P W All gene names: mel-32; C05D11.11; C05D11.11a.1; C05D11.11a.2; C05D11.11a.3; C05D11.11b.1; C05D11.11b.2; 3H530; CE01130; CE29661; NM_171169; NM_171170; WBGene00003214; WP:CE01130; WP:CE29661
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C05D11.3 Aff_C05D11.3 P W All gene names: tag-170; C05D11.3; 3H521; CE01133; WBGene00006515; WBGene00015482; WP:CE01133
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C05D12.2 Aff_C05D12.2 P W All gene names: C05D12.2; 2L713; CE32301; WBGene00007340; WP:CE32301 WormBase description: EGF domains
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C05D2.1 Aff_C05D2.1 P W All gene names: daf-4; C05D2.1; 3G721; CE16827; CE32114; CE33555; NM_065810; WBGene00000900; WP:CE16827; WP:CE32114; WP:CE33555 WormBase description: daf-4 encodes a transmembrane serine/threonine kinase that is the sole C. elegans ortholog of the type II transforming growth factor-beta (TGF-b) receptors; DAF-4 activity is required for several biological processes, including entry into and exit from the dauer larval stage, body size determination, male tail patterning, egg laying, chemosensory neuron specification, and increased thermotolerance; in regulating dauer larval development, DAF-4 acts in parallel with the insulin signaling pathway and likely partners with the DAF-1 type I TGF-b receptor to receive a signal from the DAF-7 TGF-b ligand; in body size determination and male tail patterning, DAF-4 likely partners with the SMA-6 type I receptor and responds to signals from the DBL-1 ligand; DAF-4 expression begins in late embryogenesis and continues through larval and adult stages; consistent with its role in many developmental processes, DAF-4 localizes to the plasma membrane of several tissues including head and tail neurons, the pharynx, intestine, ventral nerve cord, tail hypodermis, and body wall muscle.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C05D2.5 Aff_C05D2.5 P W All gene names: gak-1; C05D2.5; 3G695; CE26863; NM_065806; WBGene00001514; WP:CE26863 WormBase description: gak-1 encodes a protein that contains an AT hook motif, a DNA-binding domain that shows a preference for binding stretches of A/T base pairs; GAK-1 appears to play a role in meiotic chromosome segregation, as overexpression results in post-prophase I chromosome segregation abnormalities, and a corresponding increase in embryonic lethality and the proportion of genotypically XO males in an otherwise self-fertile, XX hermaphrodite population; loss of gak-1 function via RNA-mediated interference (RNAi) results in sterility in the injected hermaphrodites, suggesting a possible role in germline development as well; gak-1 expression is enhanced in the germline, although its precise subcellular localization has not been reported.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C05D9.1 Aff_C05D9.1 P W All gene names: snx-1; C05D9.1; C05D9.1.1; C05D9.1.2; C05D9.1.3; CE07927; NM_075815; SNX1; WBGene00004927; WP:CE07927; XB751
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class1                               
                                              elongate lifespan, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C05D9.2 Aff_C05D9.2 P W All gene names: lmp-2; C05D9.2; CE07928; WBGene00015471; WP:CE07928; XB745
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C06A5.10 Aff_C06A5.10 P W All gene names: C06A5.10; CE07957; WBGene00015506; WP:CE07957
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C06A5.6 Aff_C06A5.6 P W All gene names: C06A5.6; 1G560; CE07953; WBGene00015504; WP:CE07953
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, Fig2b shared                                   
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 daf-16                             
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C06A5.7 Aff_C06A5.7 P W All gene names: tmd-1; C06A5.7; 1G570; CE29023; CE29024; NM_059333; NM_059334; WBGene00006581; WP:CE29023; WP:CE29024 WormBase description: tmd-1 encodes a predicted member of the tropomodulin family and affects egg laying, locomotion, and muscle organization in one analysis using RNAi.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C06A5.8 Aff_C06A5.8 P W All gene names: C06A5.8; 1G584; CE07955; CE33360; WBGene00015505; WP:CE07955; WP:CE33360
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, intrinsic, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, list                              
                                              of genes in cluster E, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C06A5.9 Aff_C06A5.9 P W All gene names: rnf-1; tag-54; C06A5.9; 1G586; CE34249; NM_059337; WBGene00004380; WP:CE34249
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S6 removed                            
                                              genes of contamination                                                             

C06A6.4 Aff_C06A6.4 P W All gene names: C06A6.4; 4I592; CE35224; CE37607; WBGene00015509; WP:CE35224; WP:CE37607 WormBase description: aminoacylase-1
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C06A8.1 Aff_C06A8.1 P W All gene names: C06A8.1; C06A8.1a.1; C06A8.1a.2; 2I64; CE30593; CE31291; WBGene00015512; WP:CE30593; WP:CE31291 WormBase description: C06A8.1 is orthologous to human MSH HOMEO BOX HOMOLOG 1 (MTHFR; OMIM:142983, mutated in homocystinuria).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C06A8.2 Aff_C06A8.2 P W All gene names: C06A8.2; 2I70; CE31292; WBGene00015513; WP:CE31292
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C06A8.4 Aff_C06A8.4 P W All gene names: skr-17; C06A8.4; 2I75; CE02455; NM_063237; WBGene00004823; WP:CE02455 WormBase description: skr-17 encodes a homolog of Skp1 in S. cerevisiae, a core component of the SCF (Skp1p, Cullin, F-box) ubiquitin-ligase complex that facilitates ubiquitin-mediated protein degradation; SKR-17 has no known function in vivo, since skr-17(RNAi) animals are at least superficially normal, and SKR-17 does not appear to interact in vitro with any of the C. elegans cullin homologs.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C06A8.6 Aff_C06A8.6 P W All gene names: C06A8.6; 2I63; CE02457; WBGene00015516; WP:CE02457
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, spermatogenesis                               
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol                                                                        

C06B3.6 Aff_C06B3.6 P W All gene names: C06B3.6; 5O390; CE07963; WBGene00007365; WP:CE07963
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C06C6.7 Aff_C06C6.7 P W All gene names: C06C6.7; 5Q469; CE15601; WBGene00007381; WP:CE15601
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, fem3                                   
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated                                                                          

C06E1.9 Aff_C06E1.9 P W All gene names: C06E1.9; 3J696; CE24790; WBGene00015524; WP:CE24790
C06E7.3 Aff_C06E7.3 P W All gene names: C06E7.3; C06E7.3b.1; C06E7.3b.2; C06E7.3b.3; C06E7.3b.4; 4G610; CE03959; CE33517; WBGene00015540; WP:CE03959; WP:CE33517 WormBase description: S-adenosylmethionine synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C06E8.3 Aff_C06E8.2 P W All gene names: prk-1; C06E8.3; 3I91; CE29027; CE29028; CE30484; NM_066126; NM_066127; NM_171179; WBGene00004182; WP:CE29027; WP:CE29028; WP:CE30484 WormBase description: Protein kinase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C06G3.1 Aff_C06G3.1 P W All gene names: nhr-105; C06G3.1; C06G3.1a.1; C06G3.1a.2; 4H817; CE34659; CE37188; WBGene00003695; WP:CE34659; WP:CE37188 WormBase description: zinc finger protein
C06G3.8 Aff_C06G3.8 P W All gene names: C06G3.8; 4H796; CE07984; WBGene00015554; WP:CE07984
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, ViswanathanM et al 2005  S2                                   
                                              sir-2.1 regulated                                                                  

C06G4.1 Aff_C06G4.1 P W All gene names: C06G4.1; 3J79; CE28203; WBGene00015557; WP:CE28203 WormBase description: possible RNA binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E                                                   

C06G4.4 Aff_C06G4.4 P W All gene names: C06G4.4; 3J64; CE00549; WBGene00015558; WP:CE00549
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S3                                 
                                              genes pass one-way ANOVA, Wang et al 2003  S4 Dauer                                
                                              Enriched, Wang et al 2003  S4 genes pass two-wayANOVA                              
                                              P0                                                                                 

C06G8.4 Aff_C06G8.4 P W All gene names: srd-7; C06G8.4; 4L550; CE05232; NM_069600; WBGene00005085; WP:CE05232 WormBase description: 7TM chemoreceptor (srd-family)
C06H2.1 Aff_C06H2.1 P W All gene names: atp-5; phi-39; C06H2.1; C06H2.1.1; C06H2.1.2; 5L602; CE15602; WBGene00007385; WP:CE15602 WormBase description: ATP synthase D chain
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

C06H2.2 Aff_C06H2.2 P W All gene names: C06H2.2; 5L607; CE36098; WBGene00007386; WP:CE36098 WormBase description: phosphatidylcholine transfer protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

C06H2.3 Aff_C06H2.3 P W All gene names: C06H2.3; 5L609; CE05235; WBGene00007387; WP:CE05235 WormBase description: Acetyltransferase (GNAT) family
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol, Wang et al 2003  S5 genes common to                                   
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C07A9.3 Aff_C07A9.3 P W All gene names: tlk-1; C07A9.3; 3K799; CE36353; CE36354; CE39220; NM_066744; NM_181913; WBGene00006579; WP:CE36353; WP:CE36354; WP:CE39220 WormBase description: tlk-1 encodes, through alternative splicing, two isoforms of a Tousled-class serine/threonine protein kinase; TLK-1A/B are orthologous to Tousled from A. thaliana; tlk-1(RNAi) embryos have, compared to normal embryos, reduced phosphorylation of the RNA polymerase II C-terminal domain at Serine-2 and methylation of histone H3 at Lysine-36 (posttranslational modifications associated with transcriptional elongation), along with a lethal phenotype consistent with general defects in zygotic transcription; TLK-1A/B have a glutamine/asparagine-rich domain and a putative coil domain.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C07A9.7 Aff_C07A9.7 P W All gene names: C07A9.7; 3K782; CE00498; CE31769; WBGene00007403; WP:CE00498; WP:CE31769
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C07D10.2 Aff_C07D10.2 P W All gene names: bath-44; C07D10.2; C07D10.2b.1; C07D10.2b.2; 2H687; CE27057; CE29072; WBGene00015567; WP:CE27057; WP:CE29072 WormBase description: The C07D10.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E, Shen et al 2005  T1                              
                                              hif-1indepen hypoxia, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C07D8.6 Aff_C07D8.6 P W All gene names: C07D8.6; C07D8.6.1; C07D8.6.2; CE06776; WBGene00015565; WP:CE06776; XH961 WormBase description: aldehyde reductase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, mixed oogenesis soma, ViswanathanM et al 2005  S2                            
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

C07E3.10 Aff_C07E3.10 P W All gene names: C07E3.10; 2K637; CE15607; WBGene00007420; WP:CE15607
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 LateList, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C07E3.2 Aff_C07E3.2 P W All gene names: C07E3.2; C07E3.2.1; C07E3.2.2; 2K630; CE15606; WBGene00007413; WP:CE15606
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, Wang et al 2003  S5 genes common                             
                                              to feeding ANOVA, Wang et al 2003  S3  genes pass                                  
                                              one-way ANOVA                                                                      

C07E3.6 Aff_C07E3.7 P W All gene names: C07E3.6; 2K660; CE35825; WBGene00007417; WP:CE35825
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C07E3.9 Aff_C07E3.9 P W All gene names: C07E3.9; 2K641; CE02124; WBGene00007419; WP:CE02124 WormBase description: phospholipase A2
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order                                                                      

C07G1.3 Aff_C07G1.3 P W All gene names: pct-1; C07G1.3; C07G1.3a.1; C07G1.3a.2; 4I953; CE06779; CE29073; CE32571; NM_068971; WBGene00003961; WP:CE06779; WP:CE29073; WP:CE32571; pct WormBase description: ser/thr protein kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C07G1.4 Aff_C07G1.4 P W All gene names: wsp-1; C07G1.4; 4I954; CE32572; CE32573; NM_171393; NM_171394; WBGene00006957; WP:CE32572; WP:CE32573 WormBase description: wsp-1 encodes a homolog of human WASP that interacts with Arp2/3 and is required for hypodermal cell migration during morphogenesis (ventral enclosure); when mutated, human WASP leads to Wiskott-Aldrich syndrome (OMIM:301000).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

C07G2.1 Aff_C07G2.1 P W All gene names: cej-1; C07G2.1; C07G2.1a.1; C07G2.1a.2; 3F579; CE00665; CE33971; WBGene00000465; WP:CE00665; WP:CE33971 WormBase description: cej-1 encodes a protein with a chitin binding peritrophin-A domain that is required, in conjunction with B0280.5, for early embryonic development; cej-1 mRNA is expressed specifically in the adult hermaphrodite germ line, is a direct target of GLD-1, and has an RNAi phenotype consistent with the hypothesis that CEJ-1 is an effector of GLD-1 in the germline.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C07H6.6 Aff_C07H6.6 P W All gene names: clk-2; rad-5; C07H6.6; 3I606; CE30240; NM_066249; WBGene00000537; WP:CE30240 WormBase description: The clk-2 gene encodes an ortholog of the S. cerevisiae telomere length-regulating protein Tel2p that has been shown to bind a number of DNA structures in vitro, including single-, double- and four-stranded DNA; in C. elegans, CLK-2 activity is required for the DNA damage and S phase replication checkpoints, for embryonic development, and for normal biological rhythms and life span; a functional CLK-2::GFP fusion protein is detected exclusively in the cytoplasm of somatic tissues.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05                                                                             

C08A9.9 Aff_C08A9.9 P W All gene names: C08A9.9; CE06791; WBGene00015589; WP:CE06791; XR718
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C08B11.1 Aff_C08B11.1 P W All gene names: zyg-11; C08B11.1; 2I309; CE01471; NM_063276; WBGene00006996; WP:CE01471 WormBase description: Leucine Rich Repeat (2 copies)
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, mixed oogenesis soma, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C08B6.8 Aff_C08B6.8 P W All gene names: C08B6.8; 5K621; CE05245; WBGene00007429; WP:CE05245 WormBase description: YJER protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, GO                            
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C08B6.9 Aff_C08B6.9 P W All gene names: aos-1; C08B6.9; 5K608; CE05246; NM_073203; WBGene00000142; WP:CE05246 WormBase description: aos-1 encodes the C. elegans ortholog of Saccharomyces cerevisiae Aos1p and human SUMO-1 activating enzyme E1 N subunit; by homology, AOS-1 is predicted to form, with a catalytic subunit, UBA-2, a heterodimeric enzyme that activates the ubiquitin-like protein SMO-1/SUMO in preparation for its covalent attachment to target proteins to regulate their subcellular localization and/or stability; in C. elegans, AOS-1 is required for embryonic and larval development, as well as for proper Hox gene regulation; uba-2/aos-1(RNAi) animals that survive embryogenesis show ectopic expression of EGL-5 and ectopic anterior sensory ray formation. WormBase CDS description: ubiquitin activating enzyme
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C08C3.2 Aff_C08C3.2 P W All gene names: bath-15; C08C3.2; 3I864; CE39087; WBGene00015590; WP:CE39087
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C08C3.4 Aff_C08C3.4 P W All gene names: C08C3.4; 3I884; CE00069; CE39671; WBGene00015591; WP:CE00069; WP:CE39671
C08E3.2 Aff_C08E3.2 P W All gene names: C08E3.2; 2B905; CE08005; WBGene00015594; WP:CE08005
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen                                                                       

C08F11.10 Aff_C08F11.10 P W All gene names: C08F11.10; 4O412; CE17387; WBGene00007457; WP:CE17387
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C08F8.3 Aff_C08F8.3 P W All gene names: C08F8.3; 4L921; CE30596; WBGene00007445; WP:CE30596
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C09B7.2 Aff_C09B7.2 P W All gene names: C09B7.2; CE08027; WBGene00015621; WP:CE08027; XD289 WormBase description: transposase
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C09B8.6 Aff_C09B8.6 P W All gene names: hsp-25; C09B8.6; C09B8.6c.1; C09B8.6c.2; C09B8.6c.3; C09B8.6c.4; CE02466; CE33558; CE37953; WBGene00002023; WP:CE02466; WP:CE33558; WP:CE37953; XG654 WormBase description: Small heat shock protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C09C7.1 Aff_C09C7.1 P W All gene names: zig-4; C09C7.1; CE02468; NM_076934; WBGene00006981; WP:CE02468; XI545 WormBase description: IG-like C2-type domains
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C09D4.4 Aff_C09D4.4 P W All gene names: C09D4.4; 1G48; CE34254; CE34255; CE34256; WBGene00015635; WP:CE34254; WP:CE34255; WP:CE34256
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C09E8.1 Aff_C09E8.1 P W All gene names: C09E8.1; 2A853; CE31299; CE31879; WBGene00015644; WP:CE31299; WP:CE31879
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C                                                                          

C09E9.1 Aff_C09E9.1 P W All gene names: C09E9.1; 4C27; CE08036; WBGene00007476; WP:CE08036
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C09F12.1 Aff_C09F12.1 P W All gene names: clc-1; C09F12.1; CE08040; NM_077446; WBGene00000522; WP:CE08040; XL667 WormBase description: clc-1 encodes a claudin homolog, closely similar to CLC-2, that is required for normal cohesion of apical junctions in epithelia; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water; CLC-1 maintains the impermeability ('barrier function') of epithelia, since clc-1(RNAi) animals have abnormal permeability of the pharynx to dyes; clc-1 is expressed in spermatheca, pharynx, intestine, hypodermis, the excretory-secretory system, and the cell-cell junctions of the vulva; in pharyngeal cells, CLC-1 colocalizes with AJM-1 in long thin lines, parallel to the pharyngeal axis and lining the lumenal surface, that appear to correspond with apical intercellular junctions.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1 regulated                            

C09F5.1 Aff_C09F5.1 P W All gene names: C09F5.1; 3B279; CE29572; WBGene00015647; WP:CE29572
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C09F5.2 Aff_C09F5.2 P W All gene names: C09F5.2; 3B271; CE01774; WBGene00015648; WP:CE01774
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S8 SAGE genes in the dauer exit                                           

C09G4.3 Aff_C09G4.3 P W All gene names: cks-1; dom-6; C09G4.3; 4J279; CE03980; NM_069056; WBGene00001051; WP:CE03980 WormBase description: A homolog of Cks/Suc1, a highly conserved member of the eukaryotic cell cycle machinery that affects both meiosis and mitosis and has a role in the inactivation of the M-phase promoting factor (MPF) during early embryogenesis. WormBase CDS description: cyclin-dependent kinase regulatory subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C09G4.5 Aff_C09G4.5 P W All gene names: mes-6; C09G4.5; C09G4.5.1; C09G4.5.2; 4J277; CE24796; NM_069055; WBGene00003224; WP:CE24796 WormBase description: mes-6 encodes a WD repeat-containing protein that is orthologous to Drosophila Extra sex combs (Esc); as a member of a Polycomb-like chromatin repressive complex with MES-2 and MES-3, MES-6 is required maternally for normal germline development and during larval development, for anteroposterior patterning; during germline development, the MES-2/MES-3/MES-6 complex is believed to be essential for maintaining repression of the X chromosome, and in transgenic animals, the complex is necessary for germline repression of repetitive transgenes; in axial patterning, the MES-2/MES-3/MES-6 complex is required in somatic tissues for maintaining homeotic gene repression, acting upstream of the Hox genes lin-39, mab-5, and egl-5, as well as the egl-5 target gene lin-32; MES-6 expression is detected in the nuclei of all cells during early embryogenesis, in the germline precursors Z2 and Z3 and faintly in some somatic cells during late embryogenesis and the L1 larval stage, widely in later larvae, and in germline and oocyte nuclei in adults; normal MES-6 distribution is dependent upon wild-type activity of MES-2 and MES-3, and likewise, distribution of MES-3 is dependent upon wild-type activity of MES-2 and MES-6
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class2                               
                                              shorten lifespan, Reinke et al 2004, fem1 enriched                                 
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C09G5.7 Aff_C09G5.7 P W All gene names: C09G5.7; 2L5; CE01487; WBGene00007489; WP:CE01487
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes                                                          

C09G9.1 Aff_C09G9.1 P W All gene names: C09G9.1; C09G9.1.1; C09G9.1.2; 4J628; CE03000; WBGene00007492; WP:CE03000
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C09G9.2 Aff_C09G9.2 P W All gene names: C09G9.2; 4J632; CE35389; WBGene00007493; WP:CE35389
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C09G9.6 Aff_C09G9.6 P W All gene names: moe-1; oma-1; C09G9.6; C09G9.6.1; C09G9.6.2; 4J655; CE03005; NM_069141; WBGene00003864; WP:CE03005 WormBase description: The oma-1 gene encodes a zinc finger protein of the TIS11 finger type that is paralogous to OMA-2; while either oma-1 or oma-2 individually have no obvious mutant phenotype, a normal copy of at least one of these genes is required for oocyte maturation. WormBase CDS description: Zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S6 removed genes of contamination                                         

C09H10.3 Aff_C09H10.3 P W All gene names: nuo-1; C09H10.3; 2L389; CE02132; NM_063975; WBGene00003831; WP:CE02132 WormBase description: The nuo-1 gene encodes a mitochondrial NADH-ubiquinone oxidoreductase required for progression through development; nuo-1 is orthologous to the human gene NADH DEHYDROGENASE (UBIQUINONE) FLAVOPROTEIN 1 (NDUFV1; OMIM:161015), which when mutated leads to Leigh syndrome (OMIM:256000). WormBase CDS description: NADH-ubiquinone oxidoreductase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S4 Climbing, Wang                              
                                              et al 2003  S3  genes pass one-way ANOVA, Wang et al                               
                                              2003  S4 genes pass two-wayANOVA P0                                                

C09H10.6 Aff_C09H10.6 P W All gene names: C09H10.6; 2L397; CE03007; WBGene00007500; WP:CE03007 WormBase description: histone binding protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C09H5.4 Aff_C09H5.4 P W All gene names: str-143; C09H5.4; 5I546; CE08046; NM_072680; WBGene00006190; WP:CE08046 WormBase description: 7TM chemoreceptor, str family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C10A4.2 Aff_C10A4.2 P W All gene names: C10A4.2; CE02470; WBGene00015663; WP:CE02470; XI23
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C10A4.6 Aff_C10A4.6 P W All gene names: C10A4.6; CE02474; WBGene00015667; WP:CE02474; XI7
C10A4.7 Aff_C10A4.7 P W All gene names: C10A4.7; CE02475; WBGene00015668; WP:CE02475; XI24
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen                                                                       

C10C6.5 Aff_C10C6.5 P W All gene names: C10C6.5; C10C6.5.1; C10C6.5.2; 4M237; CE28537; WBGene00007513; WP:CE28537 WormBase description: ATP binding transport protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

C10C6.6 Aff_C10C6.6 P W All gene names: C10C6.6; 4M238; CE30858; WBGene00007514; WP:CE30858 WormBase description: E1-E2 ATPase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005 S2 Resveratrol regulate WT                                 

C10E2.2 Aff_C10E2.2 P W All gene names: C10E2.2; CE39893; WBGene00015673; WP:CE39893; XR359 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C10E2.5 Aff_C10E2.5 P W All gene names: C10E2.5; CE35394; WBGene00015675; WP:CE35394; XR362
C10E2.6 Aff_C10E2.6 P W All gene names: C10E2.6; C10E2.6.1; C10E2.6.2; CE29573; WBGene00015676; WP:CE29573; XR382 WormBase description: sugar transporter
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C10F3.1 Aff_C10F3.1 P W All gene names: C10F3.1; 5G479; CE08066; WBGene00015677; WP:CE08066
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, list of genes in cluster E,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C10F3.2 Aff_C10F3.2 P W All gene names: dhs-16; C10F3.2; 5G465; CE08067; NM_072153; WBGene00000979; WP:CE08067 WormBase description: dhs-16 encodes a short-chain dehydrogenase predicted to be mitochondrial. WormBase CDS description: alcohol/ribitol dehydrogenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S4 genes pass two-wayANOVA P0                                                     

C10F3.7 Aff_C10F3.6 P W All gene names: C10F3.7; 5G466; CE32581; WBGene00015679; WP:CE32581
C10G6.1 Aff_C10G6.1 P W All gene names: C10G6.1; C10G6.1b.1; C10G6.1b.2; 4G593; CE27677; CE37193; WBGene00015680; WP:CE27677; WP:CE37193
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol                                                                        

C10G8.5 Aff_C10G8.5 P W All gene names: ncx-2; C10G8.5; C10G8.5c.1; C10G8.5c.2; 5F787; CE30724; CE30725; CE32582; CE32583; NM_072013; WBGene00003567; WP:CE30724; WP:CE30725; WP:CE32582; WP:CE32583 WormBase description: sodium/calcium exchanger protein 1
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C10H11.1 Aff_C10H11.1 P W All gene names: C10H11.1; 1F327; CE29081; WBGene00015691; WP:CE29081
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

C10H11.4 Aff_C10H11.4 P W All gene names: ugt-28; C10H11.4; 1F297; CE08093; WBGene00015693; WP:CE08093 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C10H11.9 Aff_C10H11.9 P W All gene names: let-502; C10H11.9; 1F308; CE08098; NM_059039; WBGene00002694; WP:CE08098 WormBase description: let-502 encodes a Rho-binding Ser/Thr kinase orthologous to human myotonic dystrophy kinase (DM-kinase); let-502 is required for early embryonic cleavages, embryonic elongation, migration of hypodermal P cells to a ventral position, normal spermathecal contraction, and fertility; LET-502 is required for hypodermal cells to properly change their shape, and is expressed in those cells, during embryonic elongation; let-502 mutations are suppressed by mel-11 mutations, and the pattern of LET-502 expression in the embryonic epidermis and the spermatheca is opposite to that of MEL-11, indicating that LET-502 and MEL-11 have opposing functions (presumably tissue contraction and relaxation); MEL-11 requires LET-502 (along with the nonmuscle myosin NMY-1) for proper localization. WormBase CDS description: Rho-associated kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol                                                                        

C11D2.7 Aff_C11D2.4 P W All gene names: C11D2.7; C11D2.7.1; C11D2.7.2; 4G918; CE31303; WBGene00015703; WP:CE31303
C11E4.1 Aff_C11E4.1 P W All gene names: C11E4.1; CE31410; WBGene00007516; WP:CE31410; XK203 WormBase description: glutathione peroxidase
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T2 lifespan and                                 
                                              Dauer, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 Dauer Enriched, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C11G6.1 Aff_C11G6.1 P W All gene names: taf-3; C11G6.1; CE05255; NM_078256; WBGene00006384; WP:CE05255; XQ959 WormBase description: taf-3 encodes the C. elegans ortholog of mammalian TAF3(TAFII140), a component of the RNA polymerase II TFIID transcription complex; TAF-3 contains a histone fold-like domain in its N-terminus and by homology, is predicted to function in transcriptional regulation; however, as loss of taf-3 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of taf-3 in C. elegans development and/or behavior is not yet known.
C12C8.2 Aff_C12C8.2 P W All gene names: C12C8.2; 1J905; CE36100; WBGene00007533; WP:CE36100 WormBase description: L-methionine-alpha-deamino-gamma-mercaptomethane lyase
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ViswanathanM et al 2005  S2 sir-2.1                                      
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C12D5.5 Aff_C12D5.5 P W All gene names: C12D5.5; 5I147; CE06807; WBGene00015708; WP:CE06807
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol, Wang et al 2003  S4 Early genes, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

C12D5.7 Aff_C12D5.7 P W All gene names: cyp-33A1; C12D5.7; 5I160; CE06809; NM_072587; WBGene00015709; WP:CE06809 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Kwon et al 2004 T1 late-induction                                          
                                              Ethanol-response, Menzel et al 2001  T3 CYP genes,                                 
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              Romagnolo et al 2002  Fig3b Oxidation                                              

C12D8.11 Aff_C12D8.11 P W All gene names: rop-1; C12D8.11; C12D8.11.1; C12D8.11.2; 5K734; CE15613; NM_073237; WBGene00004405; WP:CE15613; rop1 WormBase description: ROP-1 ribonucleoprotein RO autoantigen
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C12D8.9 Aff_C12D8.9 P W All gene names: C12D8.9; 5K724; CE34157; WBGene00007538; WP:CE34157
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C13A10.2 Aff_C13A10.2 P W All gene names: C13A10.2; 2B648; CE08124; WBGene00015729; WP:CE08124
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes                                                                     

C13B4.1 Aff_C13B4.1 P W All gene names: C13B4.1; 2O756; CE35395; WBGene00007545; WP:CE35395
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C13B4.2 Aff_C13B4.2 P W All gene names: usp-14; C13B4.2; C13B4.2.1; C13B4.2.2; 2O772; CE15615; NM_064605; WBGene00006856; WP:CE15615 WormBase description: usp-14 encodes a homolog of ubiquitin-specific protease 14 (Usp14), a highly conserved thiol protease that hydrolyzes the peptide bond at the C-terminal glycine of ubiquitin (OMIM:607274, mutations are associated with synaptic defects in ataxia mice); by homology, USP-14 is predicted to function in ubiquitin-mediated protein degradation, or regulation of protein localization or activity; as loss of USP-14 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of USP-14 in C. elegans development and/or behavior is not yet known. WormBase CDS description: Queuine trna-ribosyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C13C4.2 Aff_C13C4.2 P W All gene names: nhr-154; C13C4.2; 5M581; CE08127; WBGene00007547; WP:CE08127 WormBase description: Ligand-binding domain of nuclear hormone receptors, Zinc finger, C4 type (two domains)
C13D9.3 Aff_C13D9.3 P W All gene names: srr-8; C13D9.3; 5F477; CE08136; NM_071943; WBGene00005659; WP:CE08136
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C13F10.2 Aff_C13F10.2 P W All gene names: C13F10.2; 5H703; CE08144; WBGene00015742; WP:CE08144
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C13F10.5 Aff_C13F10.5 P W All gene names: C13F10.5; 5H696; CE27682; WBGene00015744; WP:CE27682
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C13G5.2 Aff_C13G5.2 P W All gene names: C13G5.2; 3J706; CE29086; WBGene00015747; WP:CE29086
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C14A11.3 Aff_C14A11.3 P W All gene names: tag-150; C14A11.3; CE08151; CE30861; WBGene00006496; WBGene00015749; WP:CE08151; WP:CE30861; XD417 WormBase description: guanine-nucleotide releasing factor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, Romagnolo et al 2002  Fig3b                             
                                              Unkown                                                                             

C14A4.11 Aff_C14A4.11 P W All gene names: C14A4.11; 2K896; CE30598; WBGene00007561; WP:CE30598
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C14A4.14 Aff_C14A4.2 P W All gene names: C14A4.14; 2K875; CE24801; WBGene00007564; WP:CE24801
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C14B1.2 Aff_C14B1.2 P W All gene names: C14B1.2; 3E791; CE00899; WBGene00007573; WP:CE00899
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C14B1.4 Aff_C14B1.4 P W All gene names: C14B1.4; 3E795; CE00901; WBGene00007575; WP:CE00901 WormBase description: guanine nucleotide binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C14B1.5 Aff_C14B1.5 P W All gene names: C14B1.5; C14B1.5.1; C14B1.5.2; 3E797; CE17401; WBGene00007576; WP:CE17401 WormBase description: C14B1.5 encodes an ortholog of S. cerevisiae YIL103 and human DPH2L1/OVCA1 (OMIM:603527, deleted or downregulated in ovarian tumors); C14B1.5 is paralogous to S. cerevisiae DPH2/YKL191W, a protein component of diphtamide synthesis; C14B1.5 has no obvious function in mass RNAi assays. WormBase CDS description: diptheria toxin resistance protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C14B1.8 Aff_C14B1.8 P W All gene names: C14B1.8; 3E806; CE00905; WBGene00007579; WP:CE00905
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E                                                   

C14B1.9 Aff_C14B1.9 P W All gene names: C14B1.9; 3E814; CE00906; WBGene00007580; WP:CE00906
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C14B9.1 Aff_C14B9.1 P W All gene names: hsp-12.2; C14B9.1; C14B9.1.1; C14B9.1.2; C14B9.1.3; 3J229; CE00072; NM_066375; WBGene00002011; WP:CE00072 WormBase description: hsp-12.2 is orthologous to the human gene CRYSTALLIN, ALPHA B (CRYAB; OMIM:123590), which when mutated leads to disease. WormBase CDS description: Alpha-B-crystallin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 Climbing, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C14C10.1 Aff_C14C10.1 P W All gene names: C14C10.1; 5N69; CE05280; WBGene00007584; WP:CE05280 WormBase description: mitochondrial carrier protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C14C10.3 Aff_C14C10.3 P W All gene names: ril-2; C14C10.3; C14C10.3a.1; C14C10.3a.2; 5N78; CE05282; CE38485; WBGene00007586; WP:CE05282; WP:CE38485
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C14C11.1 Aff_C14C11.1 P W All gene names: C14C11.1; 5G145; CE06820; WBGene00015765; WP:CE06820
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, shared sperm                                                    

C14C11.2 Aff_C14C11.2 P W All gene names: C14C11.2; 5G143; CE06821; WBGene00015766; WP:CE06821
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C14C11.6 Aff_C14C11.6 P W All gene names: mut-14; C14C11.6; 5G140; CE06825; NM_072089; WBGene00003507; WP:CE06825 WormBase description: mut-14 mutants exhibit germline transposon activation, a deficient response to RNAi, resistance to co-suppression, and transgene desilencing. WormBase CDS description: helicase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, list of genes in                            
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Reinke et al 2004, GO                             
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C14C6.5 Aff_C14C6.5 P W All gene names: C14C6.5; 5B15; CE08160; WBGene00015759; WP:CE08160
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C14E2.6 Aff_C14E2.6 P W All gene names: C14E2.6; CE06833; WBGene00015775; WP:CE06833; XC440 WormBase description: triacylgycerol lipase
C14F11.1 Aff_C14F11.1 P W All gene names: C14F11.1; C14F11.1b.1; C14F11.1b.2; CE02477; CE30862; WBGene00015778; WP:CE02477; WP:CE30862; XG861 WormBase description: Aspartate aminotransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C14F5.4 Aff_C14F5.4 P W All gene names: C14F5.4; CE30370; WBGene00015777; WP:CE30370; XI576
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

C14F5.5 Aff_C14F5.5 P W All gene names: sem-5; C14F5.5; CE01784; NM_076941; WBGene00004774; WP:CE01784; XI578 WormBase description: sem-5 encodes a Src homology (SH) domain 2 and 3-containing protein, orthologous to human GRB2 (OMIM:108355), that functions in multiple signaling pathways during development; these pathways include those regulating sex myoblast migration, vulval induction, fluid balance, viability, and formation of the male tail; SEM-5 acts downstream of the LET-23 epidermal growth factor receptor to negatively regulate RAS-MAP-, as well as IP-3-, mediated signal transduction. WormBase CDS description: C. elegans sem-5
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C15B12.7 Aff_C15B12.7 P W All gene names: cdf-1; C15B12.7; CE27065; CE29581; NM_076694; NM_076695; WBGene00000393; WP:CE27065; WP:CE29581; XH114 WormBase description: a cation diffusion facilitator protein, affects vulva development, genetically interacts with let-60/ras signaling pathway; and is expressed in the vulval muscles, the intestinal cells, and in the vulval precursor cells.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C15C6.4 Aff_C15C6.4 P W All gene names: C15C6.4; 1M805; CE18505; WBGene00007603; WP:CE18505
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes, Reinke et al 2004, wt herm vs                            
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C15C7.5 Aff_C15C7.5 P W All gene names: C15C7.5; CE03991; WBGene00015791; WP:CE03991; XD770
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol, Wang et al 2003  S4 TransientList, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

C15C7.7 Aff_C15C7.1 P W All gene names: C15C7.7; CE36786; WBGene00015793; WP:CE36786; XD785
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes                                                                              

C15F1.5 Aff_C15F1.D P W All gene names: C15F1.5; 2H258; CE20510; CE39557; WBGene00015796; WP:CE20510; WP:CE39557 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, list of genes in cluster D, Reinke et al 2004,                               
                                              fem3 enriched genes, Romagnolo et al 2002  Fig3b TF                                

C15F1.7 Aff_C15F1.B P W All gene names: sod-1; C15F1.7; C15F1.7b.1; C15F1.7b.2; C15F1.B; 2H264; CE20508; CE23550; NM_063030; WBGene00004930; WP:CE20508; WP:CE23550 WormBase description: The sod-1 gene encodes an ortholog of human SOD1 (OMIM:147450), which when mutated leads to amyotrophic lateral sclerosis (OMIM:105400).
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C15F1.8 Aff_C15F1.A P W All gene names: C15F1.8; 2H266; CE23551; WBGene00015797; WP:CE23551
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C15H11.2 Aff_C15H11.2 P W All gene names: C15H11.2; 5O891; CE08179; WBGene00007614; WP:CE08179 WormBase description: G-protein coupled receptor
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C15H11.5 Aff_C15H11.5 P W All gene names: tag-338; C15H11.5; 5O899; CE08182; WBGene00007615; WP:CE08182
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated, ViswanathanM et al                               
                                              2005  S2 daf-16 Resveratrol                                                        

C15H11.6 Aff_C15H11.6 P W All gene names: nxf-2; C15H11.6; 5O896; CE36102; NM_074167; WBGene00003835; WP:CE36102 WormBase description: nxf-2 encodes a predicted homolog of human TAP protein, a member of the NXF family of shuttling transport receptors for nuclear export of mRNA, and it affects embryonic viability.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C15H11.7 Aff_C15H11.7 P W All gene names: pas-1; C15H11.7; C15H11.7.1; C15H11.7.2; 5O902; CE08184; NM_074170; WBGene00003922; WP:CE08184 WormBase description: pas-1 encodes a type 6 alpha subunit of the 26S proteasome's 20S protease core particle (CP); PAS-1 is required for embryonic development and by homology, is predicted to comprise the outer rings of the proteasome and to play a role in selective degradation of ubiquitinated proteins during development; in vitro, PAS-1 interacts with VET-1, a coiled-coil domain-containing protein expressed in the early embryo and ATN-1, an alpha-actinin, in addition to other members of the proteasome. WormBase CDS description: proteasome component (A-type)
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 Climbing, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

C15H9.5 Aff_C15H9.5 P W All gene names: C15H9.5; C15H9.5.1; C15H9.5.2; CE35402; WBGene00015801; WP:CE35402; XG715
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C16A11.2 Aff_C16A11.2 P W All gene names: C16A11.2; C16A11.2b.1; C16A11.2b.2; 2E533; CE36978; CE36979; WBGene00015815; WP:CE36978; WP:CE36979
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Reinke et al                              
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, herm soma enriched genes, ViswanathanM et al 2005                            
                                               S2 daf-16 Resveratrol, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated                                                                  

C16A11.3 Aff_C16A11.3 P W All gene names: C16A11.3; 2E523; CE19353; WBGene00015816; WP:CE19353 WormBase description: protein kinase
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, intrinsic,                                  
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C16A11.4 Aff_C16A11.4 P W All gene names: C16A11.4; 2E519; CE34688; WBGene00015817; WP:CE34688
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, GO categories, Reinke et al 2004, IVb male soma                              
                                              enriched genes                                                                     

C16A11.7 Aff_C16A11.7 P W All gene names: C16A11.7; 2E546; CE34690; WBGene00015820; WP:CE34690
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Reinke et al 2004, list of genes in cluster                                
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Reinke et al 2004, fem3 enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt males vs glp4 male enriched , Reinke et al 2004,                                
                                              list of genes in cluster D, Reinke et al 2004, shared                              
                                              sperm                                                                              

C16A3.10 Aff_C16A3.10 P W All gene names: C16A3.10; C16A3.10a.1; C16A3.10a.2; C16A3.10c.1; C16A3.10c.2; C16A3.10c.3; 3H484; CE04010; CE30604; CE37708; WBGene00015814; WP:CE04010; WP:CE30604; WP:CE37708 WormBase description: The C16A3.10 gene encodes a homolog of the human gene OAT (OMIM:258870), which when mutated leads to ornithinemia and gyrate atrophy.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

C16A3.7 Aff_C16A3.7 P W All gene names: tag-182; C16A3.7; 3H467; CE04007; WBGene00007048; WBGene00015812; WP:CE04007 WormBase description: human NFX1; D. melanogaster shuttle craft protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, intrinsic, Reinke et al 2004, wt vs glp-4                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt male                              
                                              enriched gen, Reinke et al 2004, GO categories,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C16A3.8 Aff_C16A3.8 P W All gene names: tag-213; C16A3.8; 3H463; CE27691; WBGene00015813; WP:CE27691
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, list of genes in cluster F, Reinke et al 2004, wt                            
                                              vs glp-4 enriched genes, Reinke et al 2004, list of                                
                                              genes in cluster order, Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen                                                               

C16B8.3 Aff_C16B8.3 P W All gene names: C16B8.3; C16B8.3.1; C16B8.3.2; CE04013; WBGene00015823; WP:CE04013; XE586
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C16C10.1 Aff_C16C10.1 P W All gene names: C16C10.1; C16C10.1.1; C16C10.1.2; 3F270; CE33519; WBGene00007622; WP:CE33519 WormBase description: carrier protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C16C10.2 Aff_C16C10.2 P W All gene names: C16C10.2; C16C10.2.1; C16C10.2.2; 3F268; CE01493; WBGene00007623; WP:CE01493
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004,                                 
                                              oogenesis enriched genes, Reinke et al 2004, wt herm vs                            
                                              wt male enriched gen                                                               

C16C10.3 Aff_C16C10.3 P W All gene names: C16C10.3; 3F262; CE01494; WBGene00007624; WP:CE01494
                                              
Member of lists (Publications lists):
                                              Bishop et al 2004  T1 Upregulated in                              
                                              vhl-1 vs WT, Reinke et al 2004, fem1 enriched genes,                               
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C16C10.4 Aff_C16C10.4 P W All gene names: C16C10.4; 3F261; CE01495; WBGene00007625; WP:CE01495
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

C16C10.8 Aff_C16C10.8 P W All gene names: C16C10.8; C16C10.8.1; C16C10.8.2; 3F252; CE01499; WBGene00007628; WP:CE01499 WormBase description: cell growth regulating protein
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              Wang et al 2003  S7 SAGE genes in the dataset, Wang et                             
                                              al 2003  S8 SAGE genes in the dauer exit                                           

C16C2.3 Aff_C16C2.3 P W All gene names: ocrl-1; C16C2.3; 1K292; CE17405; NM_060183; WBGene00007620; WP:CE17405 WormBase description: The C16C2.3 gene encodes an inositol-1,4,5-triphosphate 5-phosphatase homolog that is homologous to human OCRL. WormBase CDS description: inositol-1,4,5-triphosphate 5-phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C16C2.4 Aff_C16C2.4 P W All gene names: C16C2.4; 1K290; CE15621; WBGene00007621; WP:CE15621
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

C16C8.11 Aff_C16C8.11 P W All gene names: C16C8.11; 2D747; CE08222; WBGene00015849; WP:CE08222
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C16C8.12 Aff_C16C8.12 P W All gene names: C16C8.12; 2D745; CE34693; WBGene00015850; WP:CE34693
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

C16C8.14 Aff_C16C8.14 P W All gene names: C16C8.14; 2D741; CE08225; WBGene00015852; WP:CE08225
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated                                                      

C16C8.4 Aff_C16C8.4 P W All gene names: C16C8.4; 2D734; CE08215; WBGene00015842; WP:CE08215
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002   Fig3C                                          
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

C16C8.5 Aff_C16C8.5 P W All gene names: C16C8.5; 2D736; CE08216; WBGene00015843; WP:CE08216
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C16D2.1 Aff_C16D2.1 P W All gene names: C16D2.1; 2J423; CE15622; WBGene00007633; WP:CE15622
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes                                                          

C16D6.1 Aff_C16D6.1 P W All gene names: C16D6.1; CE08230; WBGene00007634; WP:CE08230; XN144
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C16H3.2 Aff_C16H3.2 P W All gene names: lec-9; C16H3.2; CE08236; NM_078443; WBGene00002272; WP:CE08236; XS215 WormBase description: lec-9 encodes a predicted lectin that affects embryonic viability. WormBase CDS description: sugar-binding protein
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Climbing, Wang et al                                
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

C17B7.11 Aff_C17B7.11 P W All gene names: fbxa-65; C17B7.11; 5D824; CE16859; WBGene00015885; WP:CE16859 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C17B7.13 Aff_C17B7.7 P W All gene names: C17B7.13; CE39894; WBGene00044765; WP:CE39894
C17B7.4 Aff_C17B7.4 P W All gene names: C17B7.4; 5D819; CE16852; WBGene00015878; WP:CE16852
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, ViswanathanM et al 2005  S2 sir-2.1                                
                                              regulated, Wang et al 2003  S4 TransientList, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

C17C3.11 Aff_C17C3.11 P W All gene names: C17C3.11; 2F827; CE34696; WBGene00015893; WP:CE34696
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, shared sperm                                                    

C17C3.5 Aff_C17C3.5 P W All gene names: C17C3.5; 2F843; CE04025; WBGene00015890; WP:CE04025
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 transient-induction                            
                                              Ethanol-res, Reinke et al 2004, intrinsic, Reinke et al                            
                                              2004, Fig2b shared gemlines, Reinke et al 2004, wt vs                              
                                              glp-4 enriched genes, Reinke et al 2004, wt males vs                               
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              herm enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C17D12.2 Aff_C17D12.2 P W All gene names: unc-75; C17D12.2; 1M191; CE36103; NM_060557; WBGene00006807; WP:CE36103 WormBase description: unc-75 encodes an RNA-binding protein with two N-terminal RNA recognition motifs (RRMs), a glutamine/asparagine-rich linker domain, and a third C-terminal RRM; UNC-75 is orthologous to mammalian CELF/BrunoL proteins that control pre-mRNA splicing; unc-75 is expressed in all neurons and in neurosecretory gland cells, and is required for normal modulation of GABA- and acetylcholine-mediated neurotransmission; UNC-75 protein is found with other RRM proteins in dynamic nuclear speckles, consistent with a role in alternative mRNA splicing; unc-75 mutations can be rescued in vivo by a human unc-75 transgene, but not by exc-7 or W02D3.11, indicating that UNC-75 acts on evolutionarily conserved but highly specific pre-mRNA substrates; both UNC-75 and EXC-7 are required in parallel for normal cholinergic neurotransmission. WormBase CDS description: RNA recognition motif. (aka RRM, RBD, or RNP domain) (2 domains)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C17D12.6 Aff_C17D12.6 P W All gene names: spe-9; C17D12.6; 1M176; CE27074; NM_060554; WBGene00004963; WP:CE27074 WormBase description: spe-9 encodes a predicted plasma membrane protein with a short intracellular domain and external EGF-like repeats most closely resembling those of the Delta, Serrate, APX-1, and LAG-2 signaling ligands; SPE-9 is required autonomously in sperm for fertilization, and by homology, likely mediates an adhesive or signaling event necessary for proper oocyte fertilization; spe-9 mRNA is detected solely in animals that are engaged in spermatogenesis; the receptor for SPE-9 is not yet known. WormBase CDS description: EGF-like domain (2 domains)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, ViswanathanM et                            
                                              al 2005  S2 daf-16 Resveratrol                                                     

C17E4.10 Aff_C17E4.10 P W All gene names: C17E4.10; 1K15; CE32589; WBGene00007647; WP:CE32589
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C17E4.3 Aff_C17E4.3 P W All gene names: C17E4.3; 1J994; CE37199; WBGene00007643; WP:CE37199
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C17E4.4 Aff_C17E4.4 P W All gene names: C17E4.4; 1J995; CE08253; WBGene00007644; WP:CE08253
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

C17E4.5 Aff_C17E4.5 P W All gene names: pab-3; C17E4.5; 1J998; CE08254; NM_060103; WBGene00003904; WP:CE08254 WormBase description: pab-3 is orthologous to human PABPN1 (OMIM:602279, mutated in oculopharyngeal muscular dystrophy). WormBase CDS description: RNA binding protein (RNP like)
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig3D Oocyte-en,                                
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C17E7.4 Aff_C17E7.4 P W All gene names: C17E7.4; 5E371; CE08264; WBGene00015899; WP:CE08264
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Lund et al 2002  Fig3D Oocyte-en, Reinke et al                             
                                              2004, fem1 enriched genes, Reinke et al 2004, list of                              
                                              genes in cluster order, Reinke et al 2004, oogenesis                               
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, list of genes in cluster E,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C17F4.6 Aff_C17F4.6 P W All gene names: gcy-19; C17F4.6; 2D542; CE36790; NM_062090; WBGene00001544; WP:CE36790 WormBase description: gcy-19 encodes a predicted transmembrane guanylyl cyclase; as loss of gcy-19 activity via RNA-mediated interference does not result in any abnormalities, the precise role of GCY-19 in C. elegans development and/or behavior is not yet known; by sequence similarity, however, GCY-19 can be predicted to function in chemosensory signal transduction. WormBase CDS description: guanylate cyclase
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b signaling                             

C17G1.5 Aff_C17G1.5 P W All gene names: C17G1.5; CE31416; WBGene00007652; WP:CE31416; XK563
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Wang et al 2003  S7 SAGE genes in the dataset,                             
                                              Wang et al 2003  S8 SAGE genes in the dauer exit                                   

C17H11.6 Aff_C17H11.6 P W All gene names: C17H11.6; C17H11.6c.1; C17H11.6c.2; C17H11.6c.3; CE27704; CE27705; CE33601; WBGene00015926; WP:CE27704; WP:CE27705; WP:CE33601; XI804
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C17H12.1 Aff_C17H12.1 P W All gene names: dyci-1; C17H12.1; C17H12.1.1; C17H12.1.2; 4H546; CE16862; NM_068637; WBGene00015927; WP:CE16862
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

C17H12.13 Aff_C17H12.13 P W All gene names: C17H12.13; 4H543; CE37201; WBGene00015938; WP:CE37201
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C18A3.1 Aff_C18A3.1 P W All gene names: C18A3.1; 2G11; CE01793; WBGene00015939; WP:CE01793
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig1-4 conserved w/                                 
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, GO                                     
                                              categories, Reinke et al 2004, list of genes in cluster                            
                                              E, ViswanathanM et al 2005  S2 sir-2.1 regulated                                   

C18A3.3 Aff_C18A3.3 P W All gene names: C18A3.3; 2G7; CE28890; WBGene00015941; WP:CE28890
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                 
                                              daf-16 Resveratrol, Wang et al 2003  S5 genes common to                            
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

C18A3.4 Aff_C18A3.4 P W All gene names: C18A3.4; C18A3.4b.1; C18A3.4b.2; 2G1; CE01796; CE29484; CE32129; WBGene00015942; WP:CE01796; WP:CE29484; WP:CE32129
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C18B12.4 Aff_C18B12.4 P W All gene names: C18B12.4; CE18510; WBGene00007666; WP:CE18510; XP656 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C18B12.5 Aff_C18B12.5 P W All gene names: fbxa-97; C18B12.5; CE08309; WBGene00007667; WP:CE08309; XP662
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C18E3.5 Aff_C18E3.5 P W All gene names: C18E3.5; 1E771; CE27713; WBGene00015974; WP:CE27713 WormBase description: beta transducin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched                                                              

C18E3.6 Aff_C18E3.6 P W All gene names: C18E3.6; 1E759; CE27714; WBGene00015975; WP:CE27714 WormBase description: adenylyl cyclase-associated protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, Fig2b shared gemlines, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, list of                             
                                              genes in cluster order, Reinke et al 2004, wt males vs                             
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C18E3.8 Aff_C18E3.8 P W All gene names: hop-1; C18E3.8; 1E778; CE08317; NM_058927; WBGene00001985; WP:CE08317 WormBase description: seven trans-membrane protein
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C18E3.9 Aff_C18E3.9 P W All gene names: C18E3.9; 1E782; CE27716; WBGene00015976; WP:CE27716
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C18E9.2 Aff_C18E9.2 P W All gene names: C18E9.2; 2J255; CE34703; WBGene00007683; WP:CE34703 WormBase description: Drosophila translocation protein 1 like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b secretion,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C18E9.4 Aff_C18E9.4 P W All gene names: C18E9.4; 2J254; CE05296; WBGene00007684; WP:CE05296
C18F10.7 Aff_C18F10.7 P W All gene names: C18F10.7; C18F10.7a.1; C18F10.7a.2; 3H366; CE00784; CE30608; WBGene00015978; WP:CE00784; WP:CE30608
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C18F10.8 Aff_C18F10.8 P W All gene names: srg-7; C18F10.8; 3H354; CE06858; NM_065970; WBGene00005165; WP:CE06858 WormBase description: 7TM chemoreceptor, srg family
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C18G1.4 Aff_C18G1.4 P W All gene names: pgl-3; tag-136; C18G1.4; 5F235; CE17420; CE27717; NM_071877; NM_071878; WBGene00003994; WBGene00015983; WP:CE17420; WP:CE27717
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, intrinsic,                                  
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, wt                                
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C18G1.5 Aff_C18G1.5 P W All gene names: hil-4; C18G1.5; C18G1.5.1; C18G1.5.2; H1.4; 5F233; CE17421; NM_071876; WBGene00001855; WP:CE17421 WormBase description: histone H1
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C18H2.2 Aff_C18H2.2 P W All gene names: C18H2.2; 3I770; CE32132; WBGene00015989; WP:CE32132
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C18H7.1 Aff_C05G6.3 P W All gene names: C18H7.1; C18H7.1.1; C18H7.1.2; 4B373; CE27718; WBGene00015993; WP:CE27718
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol, Wang et al 2003  S6 removed genes of                                  
                                              contamination, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C23F12.4 Aff_C23F12.4 P W All gene names: C23F12.4; CE04048; WBGene00016009; WP:CE04048; XK7
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C23G10.10 Aff_C23G10.10 P W All gene names: C23G10.10; 3H302; CE04056; WBGene00016016; WP:CE04056
C23G10.2 Aff_C23G10.2 P W All gene names: C23G10.2; C23G10.2a.1; C23G10.2a.2; C23G10.2c.1; C23G10.2c.2; C23G10.2c.3; 3H299; CE30613; CE37747; CE37748; WBGene00016011; WP:CE30613; WP:CE37747; WP:CE37748
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C23G10.7 Aff_C23G10.7 P W All gene names: C23G10.7; C23G10.7a.1; C23G10.7a.2; 3H286; CE38937; CE38938; CE38939; WBGene00016014; WP:CE38937; WP:CE38938; WP:CE38939
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated                                                               

C23G10.8 Aff_C23G10.9 P W All gene names: C23G10.8; C23G10.9; 3H292; CE25784; WBGene00016015; WP:CE25784 WormBase description: S. pombe adenylyl cyclase-associated protein (weak)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen                                                       

C23H3.3 Aff_C23H3.3 P W All gene names: C23H3.3; 2A349; CE08322; WBGene00016019; WP:CE08322
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C24A1.1 Aff_C24A1.1 P W All gene names: flp-24; C24A1.1; C24A1.1.1; C24A1.1.2; 3B343; CE38488; WBGene00016028; WP:CE38488
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes                                                                              

C24A1.2 Aff_C24A1.2 P W All gene names: C24A1.2; 3B333; CE27722; CE38587; NM_064841; WBGene00016029; WP:CE27722; WP:CE38587
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph                                                               

C24A11.8 Aff_C24A11.2 P W All gene names: frm-4; C24A11.8; 1F972; CE19698; CE27724; NM_059185; NM_059186; WBGene00001491; WP:CE19698; WP:CE27724 WormBase description: frm-4 encodes a predicted transmembrane protein that contains an N-terminal FERM (Band 4.1-ezrin-radixin-moesin) domain; by homology, FRM-4 is predicted to function as a membrane-cytoskeleton linker protein that plays a role in cell adhesion, migration, or organization of cell surface structures; however, as loss of frm-4 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of FRM-4 in C. elegans development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

C24A3.2 Aff_C24A3.2 P W All gene names: C24A3.2; C24A3.2a.1; C24A3.2a.2; C24A3.2a.3; C24A3.2a.4; C24A3.2a.5; C24A3.2b.1; C24A3.2b.2; CE04059; CE29184; WBGene00016033; WP:CE04059; WP:CE29184; XJ617
C24A8.3 Aff_C24A8.2 P W All gene names: pqn-15; C24A8.3; CE27080; NM_076337; WBGene00004106; WP:CE27080; XE922 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma                                     

C24B5.2 Aff_C24B5.2 P W All gene names: spas-1; C24B5.2; C24B5.2b.1; C24B5.2b.2; 5J657; CE30731; CE30732; WBGene00016045; WP:CE30731; WP:CE30732 WormBase description: ATPase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C24D10.5 Aff_C24D10.5 P W All gene names: C24D10.5; 4F915; CE16877; WBGene00016056; WP:CE16877
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C24G6.1 Aff_C24G6.1 P W All gene names: syp-2; C24G6.1; 5G17; CE17456; NM_072061; WBGene00006376; WP:CE17456
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C24G6.3 Aff_C24G6.3 P W All gene names: C24G6.3; 5F999; CE29673; WBGene00016060; WP:CE29673
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

C24G6.7 Aff_C24G6.7 P W All gene names: grl-1; C24G6.7; 5G10; CE17463; NM_072059; WBGene00001710; WP:CE17463
C24G6.8 Aff_C24G6.8 P W All gene names: C24G6.8; C24G6.8.1; C24G6.8.2; C24G6.8.3; 5G16; CE17464; WBGene00016062; WP:CE17464
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C24H10.2 Aff_C24H10.2 P W All gene names: C24H10.2; CE04067; WBGene00016068; WP:CE04067; XF683
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C24H10.5 Aff_C24H10.5 P W All gene names: uvt-2; C24H10.5; CE29674; NM_076463; WBGene00006861; WP:CE29674; XF690 WormBase description: uvt-2 encodes a protein that contains four EF-hand calcium binding motifs with similarity to human calmodulin; mRNA weakly expressed in L1 through L4 larval stages and in the adult hermaphrodite. WormBase CDS description: EF-hand calcium binding protein
C24H11.5 Aff_C24H11.5 P W All gene names: C24H11.5; 3M871; CE18528; WBGene00007702; WP:CE18528
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C24H12.5 Aff_C24H12.5 P W All gene names: C24H12.5; 2A698; CE08359; CE27729; WBGene00016074; WP:CE08359; WP:CE27729
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen                                           

C25A1.11 Aff_C25A1.11 P W All gene names: aha-1; C25A1.11; 1K770; CE08377; NM_060286; WBGene00000095; WP:CE08377 WormBase description: aha-1 encodes an ortholog of human aryl-hydrocarbon receptor nuclear translocator; interacts with AHR-1 and HIF-1 in vitro, requires HIF-1 for proper localization, and is expressed ubiquitously. WormBase CDS description: aryl hydrocarbon receptor nuclear translocator
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

C25A1.12 Aff_C25A1.12 P W All gene names: C25A1.12; 1K768; CE08378; WBGene00007711; WP:CE08378
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C25A1.8 Aff_C25A1.8 P W All gene names: C25A1.8; 1K760; CE08374; WBGene00007709; WP:CE08374 WormBase description: lectin
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C25A1.9 Aff_C25A1.9 P W All gene names: C25A1.9; 1K763; CE18532; WBGene00007710; WP:CE18532
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25A11.2 Aff_C25A11.2 P W All gene names: C25A11.2; CE30873; WBGene00016087; WP:CE30873; XJ735
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25A11.4 Aff_C25A11.3 P W All gene names: ajm-1; jam-1; C25A11.4; CE27083; CE27084; CE27085; CE30874; CE39677; NM_077135; NM_077136; NM_077137; NM_171966; WBGene00000100; WP:CE27083; WP:CE27084; WP:CE27085; WP:CE30874; WP:CE39677; XJ731 WormBase description: ajm-1 encodes a member of the apical junction molecule class that is required for correct elongation of the C. elegans embryo; AJM-1 contains a coiled-coil motif; AJM-1 binds DLG-1 in vitro, in yeast two-hybrid assays, and in vivo; AJM-1 is mislocalized in a dlg-1(RNAi) background; LET-413 is required for rapid confinement of DLG-1 and AJM-1 to a narrow apical region in C. elegans epithelia; CLC-1 colocalizes with AJM-1; vab-9 mutations enhance the adhesion defects of ajm-1 mutants; ajm-1 is expressed at the apical borders of all epithelia.
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 daf-16                                
                                              Resveratrol                                                                        

C25A8.1 Aff_C25A8.1 P W All gene names: C25A8.1; 4H777; CE08382; WBGene00016082; WP:CE08382 WormBase description: truncated MSP
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C25A8.4 Aff_C25A8.4 P W All gene names: C25A8.4; 4H773; CE32592; WBGene00016084; WP:CE32592
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes                                                                              

C25D7.6 Aff_C25D7.6 P W All gene names: mcm-3; C25D7.6; 5P538; CE08392; NM_074305; WBGene00003155; WP:CE08392 WormBase description: mcm-3 encodes a member of the MCM2/3/5 family with similarity to human DNA replication licensing factor, MCM3, and affects embryonic viability. WormBase CDS description: DNA replication licensing factor MCM3
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C25D7.7 Aff_C25D7.7 P W All gene names: rap-2; C25D7.7; 5P542; CE35831; NM_074306; WBGene00004308; WP:CE35831 WormBase description: rap-2 encodes a Ras-related GTPase that is most similar to the RAP2 members of the Ras GTPase superfamily; by homology, RAP-2 is predicted to function as a membrane-localized GTPase that likely plays a role in signal transduction; as animals homozygous for a rap-2 deletion mutation show no obvious abnormalities, the precise role of RAP-2 in C. elegans development and/or behavior is not yet known. WormBase CDS description: RAS-related protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C25D7.8 Aff_C25D7.8 P W All gene names: C25D7.8; 5P547; CE08394; WBGene00007718; WP:CE08394
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25F9.2 Aff_Y116F11.Y P W All gene names: C25F9.2; 5T899; CE17467; WBGene00007723; WP:CE17467
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, ViswanathanM et al 2005  S2 daf-16                                    
                                              Resveratrol                                                                        

C25G4.3 Aff_C25G4.3 P W All gene names: C25G4.3; 4N210; CE05304; WBGene00007731; WP:CE05304
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C25G4.4 Aff_C25G4.4 P W All gene names: tag-347; C25G4.4; 4N218; CE05305; WBGene00007732; WP:CE05305 WormBase description: SAND domain
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1 male-enriched                              
                                              TF, Reinke et al 2004, spermatogenesis enriched genes,                             
                                              Reinke et al 2004, fem3 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              males vs glp4 male enriched , Reinke et al 2004, GO                                
                                              categories, Reinke et al 2004, shared sperm,                                       
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C25H3.4 Aff_C25H3.4 P W All gene names: C25H3.4; 2F983; CE29676; WBGene00016113; WP:CE29676
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

C25H3.7 Aff_C25H3.7 P W All gene names: C25H3.7; 2F956; CE02505; CE29677; WBGene00016116; WP:CE02505; WP:CE29677
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C26B2.6 Aff_C26B2.6 P W All gene names: C26B2.6; 4I785; CE04092; WBGene00016128; WP:CE04092
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C26B2.7 Aff_C26B2.7 P W All gene names: C26B2.7; 4I781; CE04093; WBGene00016129; WP:CE04093
C26D10.1 Aff_C26D10.1 P W All gene names: ran-3; C26D10.1; 2I614; CE03024; NM_063352; WBGene00004304; WP:CE03024 WormBase description: regulator of chromosome condensation
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C26E6.11 Aff_C26E6.11 P W All gene names: mmab-1; tag-339; C26E6.11; 3G10; CE39476; WBGene00016144; WP:CE39476
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C26E6.2 Aff_C26E6.2 P W All gene names: C26E6.2; 3G43; CE32143; WBGene00016138; WP:CE32143
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, list of genes in cluster E, ViswanathanM et                            
                                              al 2005  S2 sir-2.1 regulated, ViswanathanM et al 2005                             
                                              S2 daf-16 Resveratrol                                                              

C26E6.5 Aff_C26E6.5 P W All gene names: fsn-1; C26E6.5; 3G27; CE01163; NM_065645; WBGene00001499; WBGene00016141; WP:CE01163 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C26E6.7 Aff_C26E6.7 P W All gene names: C26E6.7; 3G23; CE01165; CE32145; WBGene00016143; WP:CE01165; WP:CE32145
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              oogenesis enriched genes, Reinke et al 2004, wt herm vs                            
                                              wt male enriched gen, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C26F1.2 Aff_C26F1.2 P W All gene names: cyp-32A1; C26F1.2; 5I263; CE39228; NM_072608; WBGene00016147; WP:CE39228 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Menzel et al 2001  T3 CYP genes,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C26F1.3 Aff_C26F1.3 P W All gene names: C26F1.3; 5I259; CE06877; WBGene00016148; WP:CE06877
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, list of genes in cluster E, Romagnolo et al                               
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C26F1.7 Aff_C26F1.7 P W All gene names: C26F1.7; 5I239; CE06881; WBGene00016150; WP:CE06881
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, ViswanathanM et al 2005  S2 sir-2.1 regulated                               

C26H9A.1 Aff_C26H9A.B P W All gene names: vha-7; C26H9A.1; C26H9A.B; 4N413; CE30882; NM_070018; WBGene00006916; WP:CE30882
                                              
Member of lists (Publications lists):
                                              McElwee et al 2003  T1 targets of                                 
                                              daf-16, Reinke et al 2004, list of genes in cluster F,                             
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, mixed oogenesis soma                                                         

C27A12.3 Aff_C27A12.3 P W All gene names: tag-146; C27A12.3; 1G615; CE38999; WBGene00006492; WP:CE38999 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Reinke et al 2004, fem1                                 
                                              enriched genes, Reinke et al 2004, wt vs glp-4 enriched                            
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C27A12.8 Aff_C27A12.8 P W All gene names: ari-1; C27A12.8; C27A12.8.1; C27A12.8.2; 1G636; CE29680; NM_059348; WBGene00016158; WP:CE29680
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated,                            
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C27A2.1 Aff_C27A2.1 P W All gene names: C27A2.1; 2F355; CE27096; WBGene00016151; WP:CE27096
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C27A2.3 Aff_C27A2.3 P W All gene names: ify-1; C27A2.3; 2F344; CE04103; NM_062530; WBGene00002068; WP:CE04103
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Reinke et al 2004, Fig2b shared                                
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, list of                                 
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C27A7.6 Aff_C27A7.6 P W All gene names: C27A7.6; 5M604; CE08409; WBGene00007757; WP:CE08409
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C27B7.1 Aff_C27B7.1 P W All gene names: spr-2; C27B7.1; 4J657; CE03030; CE27804; NM_069142; WBGene00005007; WP:CE03030; WP:CE27804 WormBase description: spr-2 encodes the C. elegans ortholog of the Drosophila and mammalian SET proteins (OMIM:600960, translocation breakpoint in human SET is associated with acute myeloid leukemia); SPR-2 is predicted to be a member of the SET protein complex that functions in chromatin remodeling, DNA repair, and transcriptional regulation; in C. elegans, SPR-2 may function to regulate the activity and/or levels of the presenilin proteins encoded by sel-12 and hop-1, as mutations in spr-2 suppress mutations in sel-12 in a hop-1-dependent manner; spr-2 is detected in the nuclei of all cells at several developmental stages, including the L3 larval stage.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

C27B7.2 Aff_C27B7.2 P W All gene names: C27B7.2; 4J659; CE17476; WBGene00007760; WP:CE17476
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C27B7.5 Aff_C27B7.5 P W All gene names: C27B7.5; 4J667; CE03034; WBGene00007762; WP:CE03034 WormBase description: Zinc finger, CCHC class
                                              
Member of lists (Publications lists):
                                              Jiang et al 2001  Fig1                                            
                                              hermaphrodite-enriched TF, Jones et al 2001  Non dauer                             
                                              genes P<0.05, Reinke et al 2004, list of genes in                                  
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              Romagnolo et al 2002  Fig3b TF, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated                                                              

C27C12.2 Aff_C27C12.2 P W All gene names: C27C12.2; CE20531; WBGene00007772; WP:CE20531; XP467 WormBase description: C27C12.2 is orthologous to the human gene BA436D10.3 (EARLY GROWTH RESPONSE 2 (KROX-20 (DROSOPHILA) HOMOLOG)) (EGR2; OMIM:129010), which when mutated leads to disease. WormBase CDS description: Zinc finger, C2H2 type (3 domains)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol                                                                 

C27C12.4 Aff_C27C12.4 P W All gene names: C27C12.4; CE33976; WBGene00007774; WP:CE33976; XP473
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C27C7.1 Aff_C27C7.1 P W All gene names: C27C7.1; 1M31; CE19705; WBGene00007766; WP:CE19705
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

C27D6.4 Aff_C27D6.5 P W All gene names: C27D6.4; C27D6.4b.1; C27D6.4b.2; 2F468; CE32146; CE32147; CE32148; WBGene00016162; WP:CE32146; WP:CE32147; WP:CE32148 WormBase description: BZIP protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 TransientList, Wang et al 2003  S3  genes                              
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C27D8.4 Aff_C27D8.4 P W All gene names: C27D8.4; 4N471; CE30618; WBGene00007780; WP:CE30618
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated                                                         

C27D9.1 Aff_C27D9.1 P W All gene names: C27D9.1; 2F45; CE06891; WBGene00016163; WP:CE06891
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig3D Oocyte-en,                                 
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 daf-16                                   
                                              Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                                   
                                              regulated                                                                          

C27F2.4 Aff_C27F2.4 P W All gene names: C27F2.4; 3G48; CE01171; WBGene00016166; WP:CE01171 WormBase description: Methyltransferase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C27F2.7 Aff_C27F2.7 P W All gene names: C27F2.7; 3G72; CE38942; WBGene00016169; WP:CE38942 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C27H5.1 Aff_C27H5.1 P W All gene names: pdl-1; C27H5.1; 2H473; CE01175; NM_063089; WBGene00003966; WP:CE01175
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster B                                                                          

C27H6.3 Aff_C27H6.3 P W All gene names: C27H6.3; 5K463; CE31321; WBGene00007785; WP:CE31321
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C28A5.1 Aff_C28A5.1 P W All gene names: C28A5.1; 3F520; CE00675; WBGene00007788; WP:CE00675
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

C28A5.2 Aff_C28A5.2 P W All gene names: C28A5.2; 3F526; CE00676; WBGene00007789; WP:CE00676
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, ViswanathanM et al                              
                                              2005  S2 sir-2.1 regulated                                                         

C28A5.5 Aff_C28A5.5 P W All gene names: C28A5.5; 3F541; CE00662; WBGene00007790; WP:CE00662
C28C12.10 Aff_C28C12.10 P W All gene names: tag-77; C28C12.10; 4J268; CE27740; WBGene00006450; WP:CE27740
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C28C12.12 Aff_C28C12.9 P W All gene names: C28C12.12; C28C12.12.1; C28C12.12.2; 4J260; CE28891; WBGene00016182; WP:CE28891
C28C12.2 Aff_C28C12.2 P W All gene names: C28C12.2; 4J265; CE04109; WBGene00016178; WP:CE04109
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S6 removed genes of                                    
                                              contamination                                                                      

C28D4.1 Aff_C28D4.1 P W All gene names: nhr-100; C28D4.1; C28D4.1.1; C28D4.1.2; 4K497; CE28893; NM_069330; WBGene00003690; WP:CE28893 WormBase description: nhr-100 encodes a member of the superfamily of nuclear receptors, which is one of the most abundant class of transcriptional regulators; nuclear receptors have a well conserved DNA binding domain and a less conserved C-terminal ligand binding domain. WormBase CDS description: Ligand-binding domain of nuclear hormone receptors, Zinc finger, C4 type
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C28D4.2 Aff_C28D4.2 P W All gene names: cka-1; C28D4.2; 4K498; CE20533; NM_069331; WBGene00000509; WP:CE20533 WormBase description: choline kinase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 TransientList, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

C28D4.3 Aff_C28D4.3 P W All gene names: gln-6; C28D4.3; C28D4.3.1; C28D4.3.2; 4K504; CE08432; NM_069332; WBGene00001607; WP:CE08432 WormBase description: glutamine synthase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, Fig2b shared gemlines, Reinke                            
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster E,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S6 removed genes of contamination                                         

C28H8.4 Aff_C28H8.4 P W All gene names: C28H8.4; 3G997; CE01826; WBGene00016195; WP:CE01826 WormBase description: ER lumen protein retaining receptor
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C28H8.6 Aff_C28H8.6 P W All gene names: tag-327; C28H8.6; 3G980; CE01828; CE37096; WBGene00016197; WP:CE01828; WP:CE37096 WormBase description: LIM domains
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster A, Reinke et al 2004, list of genes in                                  
                                              cluster order, ViswanathanM et al 2005  S2 daf-16                                  
                                              Resveratrol, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C29A12.1 Aff_C29A12.1 P W All gene names: C29A12.1; 5L292; CE05326; WBGene00007797; WP:CE05326
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, Fig2b shared                                   
                                              gemlines, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt males                            
                                              vs glp4 male enriched , Reinke et al 2004, wt herm vs                              
                                              wt male enriched gen, Reinke et al 2004, list of genes                             
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C29A12.6 Aff_C29A12.6 P W All gene names: C29A12.6; 5L331; CE20535; WBGene00007800; WP:CE20535
C29E4.4 Aff_C29E4.4 P W All gene names: npp-15; C29E4.4; 3J21; CE37484; CeNup133; NM_066323; WBGene00003801; WP:CE37484
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, ViswanathanM et al 2005                              
                                              S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                                  
                                              daf-16 Resveratrol                                                                 

C29E4.8 Aff_C29E4.8 P W All gene names: C29E4.8; C29E4.8.1; C29E4.8.2; 3J40; CE29198; WBGene00016205; WP:CE29198 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Adenylate kinase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, wt herm vs wt male enriched                            
                                              gen, ViswanathanM et al 2005  S2 sir-2.1 regulated,                                
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C29F7.7 Aff_C29F7.7 P W All gene names: C29F7.7; CE08448; WBGene00007814; WP:CE08448; XO60
C29G2.2 Aff_C29G2.2 P W All gene names: C29G2.2; 5D65; CE08463; WBGene00016230; WP:CE08463
C29G2.4 Aff_C29G2.4 P W All gene names: srt-4; C29G2.4; 5D55; CE37876; NM_071305; WBGene00016232; WP:CE37876 WormBase description: 7TM chemoreceptor, srt family
C29H12.1 Aff_C29H12.1 P W All gene names: rrt-2; C29H12.1; 2G417; CE17479; NM_062826; WBGene00004680; WP:CE17479 WormBase description: arginyl-tRNA synthetase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, intrinsic, Reinke et al 2004,                            
                                              wt vs glp-4 enriched genes, Reinke et al 2004, wt herm                             
                                              vs wt male enriched gen, Reinke et al 2004, list of                                
                                              genes in cluster E, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C29H12.5 Aff_C29H12.5 P W All gene names: C29H12.5; 2G400; CE02518; WBGene00016236; WP:CE02518
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C30A5.3 Aff_C30A5.3 P W All gene names: C30A5.3; C30A5.3.1; C30A5.3.2; 3J315; CE32154; WBGene00016238; WP:CE32154
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C30A5.4 Aff_C30A5.4 P W All gene names: C30A5.4; 3J313; CE00095; WBGene00016239; WP:CE00095
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, shared sperm, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated                                                         

C30B5.1 Aff_C30B5.1 P W All gene names: tag-319; C30B5.1; 2G491; CE37325; WBGene00016243; WP:CE37325
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, list of genes in cluster E, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C30B5.4 Aff_C30B5.4 P W All gene names: C30B5.4; 2G486; CE02523; WBGene00016245; WP:CE02523 WormBase description: Probable RNA binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, GO categories,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C30C11.2 Aff_C30C11.2 P W All gene names: rpn-3; C30C11.2; C30C11.2.1; C30C11.2.2; 3J537; CE00101; NM_066468; WBGene00004460; WP:CE00101 WormBase description: Diphenol oxidase A2
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C30C11.4 Aff_C30C11.4 P W All gene names: C30C11.4; C30C11.4.1; C30C11.4.2; 3J534; CE00103; WBGene00016250; WP:CE00103 WormBase description: Msi3p
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, Kwon et al 2004 T1 late-induction                                     
                                              Ethanol-response, Lund et al 2002 Aging time course                                
                                              Fig2C heatshock, McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Romagnolo et al 2002                             
                                              Fig2a heat shock, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, ViswanathanM et al 2005  Fig6A Ethanol HS                               

C30E1.2 Aff_C30E1.2 P W All gene names: C30E1.2; CE08469; WBGene00016251; WP:CE08469; XR539
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated                                                                          

C30E1.6 Aff_C30E1.6 P W All gene names: C30E1.6; CE35415; WBGene00016255; WP:CE35415; XR527
                                              
Member of lists (Publications lists):
                                              ViswanathanM et al 2005  S2 sir-2.1                               
                                              regulated                                                                          

C30F12.2 Aff_C30F12.2 P W All gene names: C30F12.2; C30F12.2.1; C30F12.2.2; 1H544; CE16882; WBGene00016261; WP:CE16882
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated