Reinke et al 2004, list of genes in cluster order, 4701 genes

Gene list file name:Reinke2004_Fig5_list-of-genes-in-cluster-order.txt
Type of gene identifier:Cosmid name
Description:Reinke et al 2004, Fig5 list of genes in cluster order  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

3R5.1 3R5.1 P W All gene names: 3R5.1; 3O869; CE24758; WBGene00007065; WP:CE24758
                                              
Member of lists ( lists):
                                               mount02, R=0.15, Aging.p01, Germ                                 
                                              line-enriched, JW Dauer Enriched AdjT0 vs AdjT12,                                  
                                              PJRPAPER-Chromosome III Genes, Proteome Cell Role (Oct                             
                                              2000)- Genes of Unknown Ce, Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

AC3.2 AC3.2 P W All gene names: ugt-49; AC3.2; 5K853; CE37871; WBGene00007070; WP:CE37871 WormBase description: UDP-glucuronosyltransferase
                                              
Member of lists ( lists):
                                              JW UDP-glucoronosyltransferase, Lipid                             
                                              metabolism genes, Proteome Cell Role (Oct 2000)- Lipid,                            
                                              Sterol & Fat, Proteome Funct Class (Mar                                            
                                              2000)-Transferase, Proteome LG V [May 2002], Reinke et                             
                                              al 2004, list of genes in cluster order                                            

AC3.3 AC3.3 P W All gene names: abu-1; pqn-1; AC3.3; 5K858; CE05133; NM_073266; WBGene00000024; WP:CE05133 WormBase description: abu-1 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-1 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-1 may help protect the organism from damage by improperly folded nascent protein.
                                              
Member of lists ( lists):
                                               mount29, R=0.53, PJ 2378                                         
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG V                                
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

AC3.5 AC3.5 P W All gene names: AC3.5; 5K873; CE36372; WBGene00007071; WP:CE36372 WormBase description: glutamyl aminopeptidase
                                              
Member of lists ( lists):
                                               mount08, R=0.21, PJ 2378                                         
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ No8 First 1500, PJ No 2                               
                                              first 1500, PJRPAPER-Chromosome V Genes,                                           
                                              PJRPAPER-Protein Degradation, Proteases, Proteome Cell                             
                                              Role (Oct 2000)- Protein Degradation, Proteome Funct                               
                                              Class (Mar 2000)-Hydrolase, Proteome LG V [May 2002],                              
                                              Proteome Localization (Oct 2000)-Cytoplasmic, Reinke et                            
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              Valerie Reinke's 11927 genes, wmyst                                                

AC3.7 AC3.7 P W All gene names: dod-15; ugt-1; AC3.7; 5K877; CE05137; NM_073270; WBGene00007072; WP:CE05137 WormBase description: UDP-glucuronosyltransferase
                                              
Member of lists ( lists):
                                               mount08, R=0.21, age-1 daf-2 comm 999                            
                                              InAge1daf2ClusterBD 133., Aging p < .01, Aging.p01, Bea                            
                                              UDP-glucuronosyltransferase, FP 645 Intestine specific                             
                                              genes, FP 1938 Intestine genes, JW Dauer Enriched by                               
                                              AdjDT0 vs L1T0, JW UDP-glucoronosyltransferase, Lipid                              
                                              metabolism genes, PJRPAPER-Chromosome V Genes,                                     
                                              PJRPAPER-Lipid, fatty-acid and sterol metabolism,                                  
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Lipid, Sterol & Fat, Proteome Funct                               
                                              Class (Mar 2000)-Transferase, Proteome LG V [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, sir2.1ok434 283 min, sir2.1--ok434all 558 min,                            
                                              sir2.1-- 297 min, YK genes 95% different in muscle and                             
                                              intestin, YK intestinal genes (p<.001), YK                                         
                                              intestine-specific genes                                                           

AC8.1 AC8.1 P W All gene names: pme-6; pme-6ps; AC8.1; AC8.D; CE33962; NM_075638; WBGene00004054; WP:CE33962; XA862 WormBase description: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region. ; Poly(ADP-ribose) polymerase catalytic region.
                                              
Member of lists ( lists):
                                               mount04, R=0.41,  mount11, R=0.38,                               
                                              male99, Male-enriched, Proteome Cell Role (Oct 2000)-                              
                                              Protein Modificatio, Proteome Funct Class (Mar                                     
                                              2000)-Transferase, Proteome LG V [May 2002], Proteome                              
                                              Localization (Oct 2000)-Nuclear, Reinke et al 2004,                                
                                              list of genes in cluster order, YK genes 95% different                             
                                              in muscle and intestin                                                             

AC8.2 AC8.2 P W All gene names: AC8.2; AC8.B; WBGene00007074; XA867
                                              
Member of lists ( lists):
                                              Protein kinases, Proteome Cell Role                               
                                              (Oct 2000)- Signal Transduction, Proteome Funct Class                              
                                              (Mar 2000)-Protein Kinase, Proteome LG V [May 2002],                               
                                              Reinke et al 2004, list of genes in cluster order                                  

AC8.3 AC8.3 P W All gene names: AC8.3; AC8.F; CE37737; WBGene00007075; WP:CE37737; XA844
                                              
Member of lists ( lists):
                                               mount01, R=0.15, Proteome Cell Role                              
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG V [May                                
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order                                                                              

AH10.1 AH10.1 P W All gene names: AH10.1; 5O629; CE07655; WBGene00007082; WP:CE07655 WormBase description: 4-coumarate:coenzyme A ligase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Aging p < .01,                                  
                                              Biosynthesis, Energy generation genes, josh laura1/2                               
                                              common, male99, Male-enriched, PJ                                                  
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome V Genes, PJRPAPER-Energy                                
                                              Generation, PJRPAPER-Male Genes, PJRPAPER-Muslce (L1)                              
                                              negative controls-2, PJRPAPER-Sperm Genes, Proteome                                
                                              Cell Role (Oct 2000)- Energy Generation, Proteome Funct                            
                                              Class (Mar 2000)-Ligase, Proteome LG V [May 2002],                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Sperm-enriched, Valerie Reinke's 11927 genes,                             
                                              wmyst                                                                              

AH6.2 AH6.2 P W All gene names: AH6.2; 2J804; CE01456; WBGene00007080; WP:CE01456
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  Bea ras L2 mixed 561,                            
                                               mount04, R=0.41, Biosynthesis, JW Dauer ANOVA 2430 v4,                            
                                              JW Dauer Recovery Specific 1984, JW Down 540, JW Down                              
                                              Early 378, JW Mitochondrial Carrier Protein,                                       
                                              Mitochondrial, PJ 1158IntestineMuscleTTEST0.001, PJ                                
                                              2378 IntestineMusclettest0.01, PJ 4212                                             
                                              IntestineMuscleTtest0.05, PJRGDPAPER-Yeast Mito                                    
                                              (All)-Worm Homologues, PJRPAPER-Chromosome II Genes,                               
                                              PJRPAPER-Mitochondrial, PJRPAPER-Muslce (L1) negative                              
                                              controls-2, Proteome Cell Role (Oct 2000)- Small                                   
                                              Molecule Tran, Proteome Funct Class (Mar 2000)-Active                              
                                              Transporter, Proteome Funct Class (Mar                                             
                                              2000)-Transporter, Proteome LG II [May 2002], Proteome                             
                                              Localization (Oct 2000)-Mitochondrial, Proteome                                    
                                              Localization (Oct 2000)-Mitochondrial inn, Proteome                                
                                              Subcellular Localization - Mitochond, Reinke et al                                 
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, wmyst, YK genes 95% different in                             
                                              muscle and intestin                                                                

AH6.3 AH6.3 P W All gene names: AH6.3; 2J805; CE01457; WBGene00007081; WP:CE01457
                                              
Member of lists ( lists):
                                              male99, Male-enriched, PJ 1235                                    
                                              intestine-sepcific, PJ 3085 intestinal genes, PJ 3118                              
                                              intestinal genes, PJ 4212 IntestineMuscleTtest0.05, PJ                             
                                              4746 intestinal gene Con95, PJ No10-1-R16 First 1500,                              
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Male Genes,                                 
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome Funct                               
                                              Class (Mar 2000)-DNA-binding Domain, Proteome LG II                                
                                              [May 2002], Proteome Localization (Oct 2000)-Nuclear,                              
                                              Reinke et al 2004, list of genes in cluster order                                  

AH6.5 AH6.5 P W All gene names: mex-6; AH6.5; 2J815; CE26846; NM_063642; WBGene00003231; WP:CE26846 WormBase description: mex-6 encodes a CCCH zinc-finger protein highly similar to MEX-5 that functions with MEX-5 to affect embryonic viability, establish soma germline asymmetry in embryos and establish PIE-1, MEX-1, and POS-1 asymmetry in embryos, and also affects formation of intestinal cells; MEX-6 and MEX-5 may act downstream of the PAR proteins. WormBase CDS description: zinc finger protein
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              Germ line-enriched, PJ 1158IntestineMuscleTTEST0.001,                              
                                              PJ 2378 IntestineMusclettest0.01, PJ 4212                                          
                                              IntestineMuscleTtest0.05, PJ No5 first 1500,                                       
                                              PJRPAPER-Chromosome II Genes, Proteome LG II [May                                  
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

AH9.2 AH9.2 P W All gene names: crn-4; AH9.2; CE03858; NM_076014; WBGene00000797; WP:CE03858; XC876
                                              
Member of lists ( lists):
                                              Proteome Cell Role (Oct 2000)- Genes                              
                                              of Unknown Ce, Proteome LG X [May 2002], Reinke et al                              
                                              2004, list of genes in cluster order                                               

B0001.2 B0001.2 P W All gene names: B0001.2; 4M912; CE36776; WBGene00007087; WP:CE36776
                                              
Member of lists ( lists):
                                               mount02, R=0.15, GD-Chol "\/",                                   
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes, GD-U29-Sp                             
                                              (wrt L1 95), Germ line-enriched, josh laura1/2 common,                             
                                              Peter's Acetyl-P001 Superset, PJ No8 First 1500, PJ                                
                                              No10-1-R15 First 1500, PJ No10-1-R16 First 1500,                                   
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-xU29-specific (wrtWT), PJRPAPER-zU29WLev                                  
                                              down-up, PJRPAPER-zU29-Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

B0001.3 B0001.3 P W All gene names: B0001.3; 4M908; CE29523; WBGene00007088; WP:CE29523
                                              
Member of lists ( lists):
                                               mount02, R=0.15, Germ line-enriched,                             
                                              JW SAGE p<0.001 (292), PJ No 2 first 1500,                                         
                                              PJRPAPER-Chromosome IV Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

B0001.7 B0001.7 P W All gene names: B0001.7; 4M916; CE05145; WBGene00007092; WP:CE05145
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Aging p < .01,                                  
                                              Art-1-7, operon first genes, PJ 4212                                               
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome IV Genes,                            
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0019.1 B0019.1 P W All gene names: amx-2; B0019.1; 1N352; CE32294; NM_060835; WBGene00000138; WP:CE32294
                                              
Member of lists ( lists):
                                               mount01, R=0.15, Amine oxidase, PJ No                            
                                              2 first 1500, PJRPAPER-Chromosome I Genes,                                         
                                              PJRPAPER-Secretory Vesicles, Proteome Cell Role (Oct                               
                                              2000)- Genes of Unknown Ce, Proteome LG I [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

B0019.2 B0019.2 P W All gene names: B0019.2; 1N373; CE37075; WBGene00007094; WP:CE37075
                                              
Member of lists ( lists):
                                               mount11, R=0.38, GD-GABA NSD/AMB                                 
                                              (Anova/TTest), GD-U25 muscle, Peter's Neuro (95;                                   
                                              06-18-01), Peter's Neuro (99; 06-18-01), PJ No5 first                              
                                              1500, PJ No 2 first 1500, PJRPAPER-Chromosome I Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0024.1 B0024.1 P W All gene names: col-149; B0024.1; 5K772; CE05146; NM_073245; WBGene00000722; WP:CE05146 WormBase description: collagen
                                              
Member of lists ( lists):
                                               mount16, R=0.40, Collagen, GD-L2                                 
                                              Muscle Genes, GDPAPER-Prelim Mixed Muscle, JW 1703                                 
                                              merged Peters zMuscle 8-02, JW Dauer ANOVA 2430 v4, JW                             
                                              Dauer Recovery Specific 1984, JW Late 325, JW SAGE                                 
                                              mixed stage, Peter's All Muscle Genes (1 16 01),                                   
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's UP-Reg                               
                                              Muscle (10 25 00), PJ 1235 intestine-sepcific, PJ 2378                             
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No4 first1500, PJ No5 first 1500, PJ No8                                 
                                              First 1500, PJ No10-1-R16 First 1500, PJ No10-1-R15                                
                                              First 1500, PJ No 2 first 1500, PJRGDPAPER-Collagens                               
                                              (All), PJRGDPAPER-Collagens (Non-BM),                                              
                                              PJRGDPAPER-Collagens (unspecified), PJRPAPER-Chromosome                            
                                              V Genes, PJRPAPER-Collagens, PJRPAPER-Cuticle                                      
                                              Collagens, PJRPAPER-Cuticle Collogens Grp1a,                                       
                                              PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0024.10 B0024.10 P W All gene names: B0024.10; B0024.10.1; B0024.10.2; 5K796; CE05154; WBGene00007100; WP:CE05154
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount02, R=0.15,                                 
                                              Art-1-7, josh laura1/2 common, PJ                                                  
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome V Genes, Proteome Cell Role                             
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG V [May                                
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, sir2.1ok434 283 min, sir2.1--ok434all                              
                                              558 min, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

B0024.13 B0024.13 P W All gene names: B0024.13; 5K803; CE05157; CE35376; WBGene00007102; WP:CE05157; WP:CE35376
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, PJ                                     
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome V Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

B0024.2 B0024.2 P W All gene names: col-150; B0024.2; 5K774; CE05147; NM_073246; WBGene00000723; WP:CE05147 WormBase description: collagen
                                              
Member of lists ( lists):
                                               mount16, R=0.40, age-1 daf-2 comm 999                            
                                              InAge1daf2ClusterBD 133., Collagen, GD-Chol UP, GD-Lev                             
                                              Muscle Genes, GD-Lev-Sp (wrt U29 95), GD-Lev-Sp (wrt wt                            
                                              95), Peter's Acetyl-P001 Superset, Peter's Lev UP                                  
                                              unc-29 DOWN (anova+10), PJ                                                         
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No10-1-R16 First 1500, PJ No10-1-R15 First                               
                                              1500, PJRGDPAPER-Collagens (All), PJRGDPAPER-Collagens                             
                                              (Non-BM), PJRGDPAPER-Collagens (unspecified),                                      
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-Collagens, PJRPAPER-Cuticle Collagens,                                    
                                              PJRPAPER-Cuticle Collogens Grp1a,                                                  
                                              PJRPAPER-xLEV-specific (wrtWT), PJRPAPER-zLev-Genes,                               
                                              PJRPAPER-zU29WLev up, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG V [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin                                                                

B0025.2 B0025.2 P W All gene names: csn-2; B0025.2; B0025.2.1; B0025.2.2; B0025.2.3; 1G601; CE27562; NM_059339; WBGene00000814; WP:CE27562 WormBase description: csn-2 encodes a homolog of COP9 signalosome complex subunit 2 that affects embryonic viability and growth rate.
                                              
Member of lists ( lists):
                                               mount02, R=0.15, FP 464 Muscle                                   
                                              specific genes, FP 1311 similar in intestine and                                   
                                              muscle, FP 1938 Intestine genes, Fraser's 50-80% Emb                               
                                              (02-01-01), Fraser's Complete RNAi List, Fraser's Slow                             
                                              Growth (02-01-01), GD-Chol "/\", GD-Chol Down, GD-GABA                             
                                              "\/" (Anova/TTest), GD-L1-Sp (99.0 M-W) Muscle Genes,                              
                                              GD-L1 Muscle Genes, GD-L1-Sp (95 TTest), GD-L1-Sp (wrt                             
                                              U29 95), GD-Lev Muscle Genes, GD-Musc muscle, GD-U25                               
                                              muscle, GD-U29-Sp (wrt L1 95), GD-U29 muscle genes,                                
                                              GD-U29-Sp (wrt Lev 95), GD-WT-Sp (wrt Lev 95), Germ                                
                                              line-enriched, JW 1703 merged Peters zMuscle 8-02,                                 
                                              Peter's Acetyl-P001 Superset, Peter's All Muscle Genes                             
                                              (1 16 01), Peter's Dorsal List (02-19-01), Peter's L1                              
                                              Muscle Genes (95 Con; 02-01-01), Peter's L1-Dorsal+Excr                            
                                              avg (99.9), Peter's L2 Muscle (95 Con; 02-01-01),                                  
                                              Peter's Musc-non-neuro(sp&enri;fr99.9 Superset),                                   
                                              Peter's Neuro (95; 06-18-01), Peter's Neuro (99;                                   
                                              06-18-01), Peter's Neuro (99.9; 06-18-01), Peter's                                 
                                              Neuro-non-musc(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, Peter's                                 
                                              ventral muscle-Specific (p<0.05), Peter's                                          
                                              Ventral-Specific L1 (95) list (02-28-01), Peters                                   
                                              L1-Specific, PJ 836 muscle and intestine in common, PJ                             
                                              1005I0.05M0.001, PJ 1445 M0.05I0.001, PJ 1617  Muscle                              
                                              and intestine in common, PJ 1899                                                   
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJ No4 first1500, PJ No8 First 1500, PJ                                     
                                              No10-1-R16 First 1500, PJ No10-1-R15 First 1500,                                   
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome I Genes,                             
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1 Muscle Genes                            
                                              (1364), PJRPAPER-xWT-specific (wrtLEV),                                            
                                              PJRPAPER-xWT-specific (wrtU29), PJRPAPER-zL1-Specific                              
                                              Genes, PJRPAPER-zL1 Muscle Genes, PJRPAPER-zL1vL2 nsd,                             
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev down,                                       
                                              PJRPAPER-zU29WLev up-down, PJRPAPER-zU29-Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin,                              
                                              YK intestinal genes (p<.001), YK muscle-specific genes,                            
                                              YK Similar muscle and intestine genes                                              

B0034.4 B0034.4 P W All gene names: B0034.4; 2G258; CE02412; WBGene00015004; WP:CE02412
                                              
Member of lists ( lists):
                                               mount04, R=0.41, PJRPAPER-Chromosome                             
                                              II Genes, PJRPAPER-Muslce (L1) negative controls-2,                                
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG II [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

B0035.11 B0035.11 P W All gene names: B0035.11; 4M94; CE05166; WBGene00007110; WP:CE05166 WormBase description: Yeast LEO1 protein like
                                              
Member of lists ( lists):
                                               mount02, R=0.15,  stuart layer13,                                
                                              Oocyte-enriched, PJ 4746 intestinal gene Con95, PJ                                 
                                              No10-1-R16 First 1500, PJRPAPER-Chromosome IV Genes,                               
                                              PJRPAPER-Oocyte Genes, Proteome Cell Role (Oct 2000)-                              
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

B0035.12 B0035.12 P W All gene names: B0035.12; B0035.12.1; B0035.12.2; 4M96; CE05167; WBGene00007111; WP:CE05167 WormBase description: polyadenylate-binding protein like
                                              
Member of lists ( lists):
                                               mount02, R=0.15,  stuart layer7,                                 
                                              stuart layer13, Germ line-enriched, josh laura2 4/8                                
                                              common, PJRPAPER-Chromosome IV Genes, Proteome Cell                                
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome Funct                               
                                              Class (Mar 2000)-RNA-Binding Subuni, Proteome LG IV                                
                                              [May 2002], Proteome Localization (Oct 2000)-Nuclear,                              
                                              Reinke et al 2004, list of genes in cluster order, RNA                             
                                              binding, rosetta, Valerie Reinke's 11927 genes                                     

B0035.3 B0035.3 P W All gene names: B0035.3; 4M80; CE05161; WBGene00007106; WP:CE05161 WormBase description: viral non-structural protein like
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, daf-16                                 
                                              p<.001, 7-01, FP 1938 Intestine genes, josh laura1/2                               
                                              common, operon first genes, Peter's L2 Muscle (95 Con;                             
                                              02-01-01), PJ 1235 intestine-sepcific, PJ 2378                                     
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome IV Genes, Proteome Cell Role                            
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG IV [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, YK intestinal genes (p<.001), YK Similar muscle                             
                                              and intestine genes                                                                

B0035.6 B0035.6 P W All gene names: B0035.6; 4M87; CE20443; WBGene00007109; WP:CE20443
                                              
Member of lists ( lists):
                                               mount02, R=0.15, Art-1-7, JW Dauer                               
                                              Enriched by AdjDT0 vs L1T0, PJ 2378                                                
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome IV Genes, Proteome Cell Role                            
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG IV [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

B0035.7 B0035.7 P W All gene names: his-47; B0035.7; 4M88; NM_069730; WBGene00001921; his 12 WormBase description: his-47 encodes an H2A histone; by homology, HIS-47 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-47 is a replication-dependent histone locus that resides in a histone gene-rich region on chromosome IV. WormBase CDS description: histone H2A
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer13,                                
                                              Aging p < .01, Art-1-7, GDPAPER-Prelim Mixed Muscle,                               
                                              Histone genes, Neuro-1 L1 Upreg (11 20 00), Peter's                                
                                              Acetyl-P001 Superset, Peter's All Muscle Genes (1 16                               
                                              01), Peter's L1 Muscle Genes (95 Con; 02-01-01),                                   
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's                                      
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, Peter's                                 
                                              UP-Reg Muscle (10 25 00), PJ 1445 M0.05I0.001, PJ 1617                             
                                              Muscle and intestine in common, PJ 1899                                            
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJ No10-1-R16 First 1500, Proteome Cell Role                                
                                              (Oct 2000)- Chromatin/Chromosom, Proteome Funct Class                              
                                              (Mar 2000)-DNA-binding Domain, Proteome LG IV [May                                 
                                              2002], Proteome Localization (Oct 2000)-Nuclear, Reinke                            
                                              et al 2004, list of genes in cluster order, wmyst, YK                              
                                              genes 95% different in muscle and intestin                                         

B0041.5 B0041.5 P W All gene names: B0041.5; 1F218; CE29527; WBGene00015009; WP:CE29527
                                              
Member of lists ( lists):
                                              204 diff min, 684 N2 hs min (L2), 1003                            
                                              N2 hs min (egg + L2),  Bea ras L2 mixed 561,  bea RasL2                            
                                              486 genes,  mount11, R=0.38, Bea Ras L2 time course                                
                                              (99%), daf-16 p<.001, 7-01, daf-16 (p < .001), FP 645                              
                                              Intestine specific genes, FP 1311 similar in intestine                             
                                              and muscle, FP 1938 Intestine genes, GD-Chol Down,                                 
                                              GD-GABA NSD/AMB (Anova/TTest), GD-L1 Muscle Genes,                                 
                                              GD-Musc muscle, GD-WT-Sp (wrt Lev 95), JW 1703 merged                              
                                              Peters zMuscle 8-02, JW Dauer Enriched by AdjDT0 vs                                
                                              L1T0, L2 Hs genes 99.9, Peter's All Muscle Genes (1 16                             
                                              01), Peter's Dorsal List (02-19-01), Peter's                                       
                                              L1-Dorsal+Excr avg (99.9), Peter's L1 Muscle Genes (95                             
                                              Con; 02-01-01), Peter's L2 Muscle (95 Con; 02-01-01),                              
                                              Peter's Muscle-Neuro Ubiq (99.9 Superset list), Peter's                            
                                              Neuro (95; 06-18-01), Peter's Neuro (99; 06-18-01),                                
                                              Peter's Superset of L1-L2 Genes (considering 99.9, PJ                              
                                              1005I0.05M0.001, PJ 1617  Muscle and intestine in                                  
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No10-1-R16 First 1500, PJ No                             
                                              2 first 1500, PJRPAPER-1329 L1 Muscle Genes (Chromo I),                            
                                              PJRPAPER-1329 L1 Muscle List (genes within 10,                                     
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome I Genes,                             
                                              PJRPAPER-CLustered muscle genes (12 16 01), PJRPAPER-L1                            
                                              Muscle Genes (unknowns from 1329, PJRPAPER-L1 Muscle                               
                                              Genes (95), PJRPAPER-L1 Muscle Genes (1364),                                       
                                              PJRPAPER-xWT-specific (wrtLEV), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zU29WLev down,                                
                                              PJRPAPERz-L1 Cluster (10 kb; no para or ops),                                      
                                              PJRPAPERz-L1 Clustered(without Paralogues wit, Proteome                            
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              I [May 2002], rasl2, Reinke et al 2004, list of genes                              
                                              in cluster order, rosetta, YK genes 95% different in                               
                                              muscle and intestin, YK intestinal genes (p<.001), YK                              
                                              intestine-specific genes, YK Similar muscle and                                    
                                              intestine genes                                                                    

B0041.6 B0041.6 P W All gene names: ptps-1; B0041.6; 1F220; CE34237; CE39541; WBGene00015010; WP:CE34237; WP:CE39541 WormBase description: B0041.6 is orthologous to the human gene 6-PYRUVOYLTETRAHYDROPTERIN SYNTHASE (PTS; OMIM:261640), which when mutated leads to disease.
                                              
Member of lists ( lists):
                                               mount19, R=0.29, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, daf-2 1384 min, daf-2 1384                               
                                              InAgingSetMin3ClusterB, FP 1938 Intestine genes,                                   
                                              GD-Chol "\/", GD-U29 muscle genes, GD-U29-Sp (wrt Lev                              
                                              95), GD-U29-Sp (wrt L1 95), Peter's Acetyl-P001                                    
                                              Superset, Peter's Dorsal List (02-19-01), Peter's                                  
                                              Excretory-Specific (p<0.05), Peter's Excretory-SPecific                            
                                              med rank (95), Peter's L1-Dorsal+Excr avg (99.9), PJ                               
                                              1235 intestine-sepcific, PJ 2378                                                   
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No4 first1500, PJRPAPER-Cholin Superset,                                 
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-xU29-specific                                
                                              (wrtWT), PJRPAPER-zU29WLev down-up,                                                
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG I [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK intestinal genes                                  
                                              (p<.001), YK Similar muscle and intestine genes                                    

B0198.3 B0198.3 P W All gene names: B0198.3; CE37308; WBGene00007116; WP:CE37308; XM662 WormBase description: protein kinase
                                              
Member of lists ( lists):
                                               mount09, R=0.16, PJRPAPER-Chromosome                             
                                              X Genes, PJRPAPER-Serine/Threonine Kinases,                                        
                                              PJRPAPER-Tyrosine Kinase, Protein kinases, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome                                
                                              Funct Class (Mar 2000)-Protein Kinase, Proteome LG X                               
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

B0205.1 B0205.1 P W All gene names: B0205.1; 1L292; CE34238; CE36908; WBGene00015017; WP:CE34238; WP:CE36908
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  Bea ras L2 mixed 561,                            
                                               bea RasL2 486 genes,  mount11, R=0.38,  stuart                                    
                                              layer13, Art-1-7, Bea L2 mixed 709, Bea Ras L2 time                                
                                              course (99%), PJRPAPER-Chromosome I Genes, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              I [May 2002], rasl2, Reinke et al 2004, list of genes                              
                                              in cluster order, rosetta, SylviaAll 144, Valerie                                  
                                              Reinke's 11927 genes                                                               

B0205.4 B0205.4 P W All gene names: B0205.4; 1L320; CE39201; WBGene00015019; WP:CE39201 WormBase description: The B0205.4 gene encodes a homolog of the human gene FUT1, which when mutated leads to leukocyte adhesion deficiency, type II (OMIM:266265).
                                              
Member of lists ( lists):
                                               mount14, R=0.38, Aging.p01, JW Dauer                             
                                              ANOVA 2430 v4, JW Dauer Recovery Specific 1984, JW Late                            
                                              325, PJ 2378 IntestineMusclettest0.01, PJ 4212                                     
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome I Genes,                             
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG I                                
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

B0205.6 B0205.6 P W All gene names: B0205.6; 1L315; CE30405; WBGene00015021; WP:CE30405 WormBase description: aminotransferase
                                              
Member of lists ( lists):
                                               mount02, R=0.15,  stuart layer7,                                 
                                              GD-Chol Down, GD-GABA NSD/AMB (Anova/TTest), GD-Musc                               
                                              muscle, GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes,                               
                                              Peter's Acetyl-P001 Superset, Peter's L1 Muscle Genes                              
                                              (95 Con; 02-01-01), Peter's Neuro (95; 06-18-01),                                  
                                              PJRGDPAPER-Yeast Mito (All)-Worm Homologues,                                       
                                              PJRGDPAPER-Yeast Mito (Prokaryotic)-Worm Homo,                                     
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome I Genes,                             
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-zU29WLev down,                             
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Other Metabolism, Proteome LG I [May 2002], Reinke et                              
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              Valerie Reinke's 11927 genes, wmyst, YK genes 95%                                  
                                              different in muscle and intestin                                                   

B0207.6 B0207.6 P W All gene names: B0207.6; 1G512; CE30229; WBGene00015029; WP:CE30229
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer13,                                
                                              Oocyte-enriched, PJRPAPER-Chromosome I Genes,                                      
                                              PJRPAPER-Oocyte Genes, Proteome Cell Role (Oct 2000)-                              
                                              Genes of Unknown Ce, Proteome LG I [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, wmyst                                                

B0212.3 B0212.3 P W All gene names: B0212.3; 4E307; CE16769; WBGene00015037; WP:CE16769
                                              
Member of lists ( lists):
                                              204 diff min, 771-Egg-99-min,                                     
                                              mount11, R=0.38,  stuart layer13, Art-1-7,                                         
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-Muslce (L1)                                 
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta, YK                            
                                              genes 95% different in muscle and intestin                                         

B0218.6 B0218.6 P W All gene names: clec-51; B0218.6; 4I928; CE06689; WBGene00015050; WP:CE06689 WormBase description: 7TM chemoreceptor, clec family
                                              
Member of lists ( lists):
                                               mount08, R=0.21, Bea lectin, FP 645                              
                                              Intestine specific genes, FP 1938 Intestine genes,                                 
                                              Male-enriched, PJRPAPER-Chromosome IV Genes,                                       
                                              PJRPAPER-Extracellular (not cell wall or collagen),                                
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome Funct Class (Mar 2000)-Small Molecule Bin,                                
                                              Proteome LG IV [May 2002], Proteome Localization (Oct                              
                                              2000)-Extracellular (ex, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin,                              
                                              YK intestinal genes (p<.001), YK intestine-specific                                
                                              genes                                                                              

B0218.7 B0218.7 P W All gene names: B0218.7; 4I930; CE06690; WBGene00015051; WP:CE06690
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Art-1-7, josh                                   
                                              laura1/2 common, male99, Male-enriched,                                            
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-Male Genes,                                 
                                              PJRPAPER-Muscle negative controls, PJRPAPER-Muslce (L1)                            
                                              negative controls-2, PJRPAPER-Sperm Genes, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              IV [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Sperm-enriched, Valerie                                    
                                              Reinke's 11927 genes                                                               

B0222.6 B0222.6 P W All gene names: col-144; B0222.6; 5J640; CE30585; NM_072973; WBGene00000717; WP:CE30585
                                              
Member of lists ( lists):
                                               mount16, R=0.40,  stuart layer12,                                
                                              age1-216daf2-1384All In age1daf2 modif 703 mi,                                     
                                              Collagen, daf-2 1384 InAgingSetMin3ClusterA, daf-2 1384                            
                                              min, GD-Chol UP, GD-GABA NSD/AMB (Anova/TTest), GD-L1                              
                                              Muscle Genes, GD-L1-Sp (wrt U29 95), GD-L2 Muscle                                  
                                              Genes, GD-Lev Muscle Genes, GD-Lev-Sp (wrt U29 95),                                
                                              GDPAPER-Prelim Mixed Muscle, JW 1703 merged Peters                                 
                                              zMuscle 8-02, JW Climbing 386, JW Dauer ANOVA 2430 v4,                             
                                              JW Dauer Recovery Specific 1984, Neuro-1 L1 Upreg (11                              
                                              20 00), Peter's Acetyl-P001 Superset, Peter's All                                  
                                              Muscle Genes (1 16 01), Peter's Dorsal List (02-19-01),                            
                                              Peter's L1 Muscle Genes (95 Con; 02-01-01), Peter's                                
                                              L1-Dorsal+Excr avg (99.9), Peter's L2 Muscle (95 Con;                              
                                              02-01-01), Peter's Superset of L1-L2 Genes (considering                            
                                              99.9, Peter's UP-Reg Muscle (10 25 00), PJ 836 muscle                              
                                              and intestine in common, PJ 1005I0.05M0.001, PJ 1445                               
                                              M0.05I0.001, PJ 1617  Muscle and intestine in common,                              
                                              PJ 1899 IntestineMuscleCon95incommon, PJ 3085                                      
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No4 first1500, PJ No5 first                              
                                              1500, PJ No8 First 1500, PJ No10-1-R16 First 1500,                                 
                                              PJRGDPAPER-Collagens (All), PJRGDPAPER-Collagens                                   
                                              (Non-BM), PJRGDPAPER-Collagens (unspecified),                                      
                                              PJRPAPER-1329 L1 Muscle List (genes within 10,                                     
                                              PJRPAPER-1329 L1 Muscle Genes (Chromo V),                                          
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-Collagens, PJRPAPER-Cuticle Collagens,                                    
                                              PJRPAPER-Cuticle Collogens Grp1a, PJRPAPER-L1 Muscle                               
                                              Genes (95), PJRPAPER-L1 Muscle Genes (1364),                                       
                                              PJRPAPER-xWT-specific (wrtU29), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                             
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev up, PJRPAPERz-L1                            
                                              Cluster (10 kb; no para or ops), PJRPAPERz-L1                                      
                                              Clustered(without Paralogues wit, PJRPAPERz-L2                                     
                                              Clustered (inc Operons not Paral, PJRPAPERz-L2                                     
                                              Clustered(without Paralogues wit, Proteome Cell Role                               
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG V [May                                
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

B0222.7 B0222.7 P W All gene names: col-145; B0222.7; 5J642; CE06698; NM_072974; WBGene00000718; WP:CE06698
                                              
Member of lists ( lists):
                                               mount16, R=0.40,  stuart layer12,                                
                                              Collagen, GD-Chol UP, GD-L1 Muscle Genes, GD-L1-Sp (wrt                            
                                              U29 95), GD-L2 Muscle Genes, GD-Lev Muscle Genes,                                  
                                              GD-Lev-Sp (wrt U29 95), JW 1703 merged Peters zMuscle                              
                                              8-02, JW Climbing 386, JW Dauer ANOVA 2430 v4, JW Dauer                            
                                              Recovery Specific 1984, Neuro-1 L1 Upreg (11 20 00),                               
                                              Peter's Acetyl-P001 Superset, Peter's All Muscle Genes                             
                                              (1 16 01), Peter's Dorsal List (02-19-01), Peter's L1                              
                                              Muscle Genes (95 Con; 02-01-01), Peter's L1-Dorsal+Excr                            
                                              avg (99.9), Peter's L2 Muscle (95 Con; 02-01-01),                                  
                                              Peter's Lev UP unc-29 DOWN (anova+10), Peter's                                     
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, PJ 836                                  
                                              muscle and intestine in common, PJ 1005I0.05M0.001, PJ                             
                                              1445 M0.05I0.001, PJ 1617  Muscle and intestine in                                 
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No4 first1500, PJ No5 first                              
                                              1500, PJ No8 First 1500, PJ No10-1-R16 First 1500, PJ                              
                                              No10-1-R15 First 1500, PJRGDPAPER-Collagens (All),                                 
                                              PJRGDPAPER-Collagens (Non-BM), PJRGDPAPER-Collagens                                
                                              (unspecified), PJRPAPER-1329 L1 Muscle List (genes                                 
                                              within 10, PJRPAPER-1329 L1 Muscle Genes (Chromo V),                               
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-Collagens, PJRPAPER-Cuticle Collagens,                                    
                                              PJRPAPER-Cuticle Collogens Grp1a, PJRPAPER-L1 Muscle                               
                                              Genes (95), PJRPAPER-L1 Muscle Genes (1364),                                       
                                              PJRPAPER-xWT-specific (wrtU29), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                             
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev up, PJRPAPERz-L1                            
                                              Cluster (10 kb; no para or ops), PJRPAPERz-L1                                      
                                              Clustered(without Paralogues wit, PJRPAPERz-L2                                     
                                              Clustered (inc Operons not Paral, PJRPAPERz-L2                                     
                                              Clustered(without Paralogues wit, Proteome Cell Role                               
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG V [May                                
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, sir2.1--ok434all 558 min, sir2.1-- 297                             
                                              min, Valerie Reinke's 11927 genes                                                  

B0222.8 B0222.8 P W All gene names: col-10; B0222.8; 5J644; CE06699; NM_072975; WBGene00000599; WP:CE06699 WormBase description: col-10 encodes a collagen protein; expressed exclusively in hypodermal cells
                                              
Member of lists ( lists):
                                               mount16, R=0.40,  stuart layer12,                                
                                              Collagen, FP 464 Muscle specific genes, GD-GABA NSD/AMB                            
                                              (Anova/TTest), GD-L1 Muscle Genes, GD-L1-Sp (wrt U29                               
                                              95), GD-L2 Muscle Genes, GD-Lev Muscle Genes, GD-Lev-Sp                            
                                              (wrt U29 95), GD-Musc muscle, GD-U29 muscle genes, JW                              
                                              1703 merged Peters zMuscle 8-02, JW Climbing 386, JW                               
                                              Dauer ANOVA 2430 v4, JW Dauer Recovery Specific 1984,                              
                                              Neuro-1 L1 Upreg (11 20 00), Peter's Acetyl-P001                                   
                                              Superset, Peter's All Muscle Genes (1 16 01), Peter's                              
                                              Dorsal List (02-19-01), Peter's L1-Dorsal+Excr avg                                 
                                              (99.9), Peter's L1 Muscle Genes (95 Con; 02-01-01),                                
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's Superset                             
                                              of L1-L2 Genes (considering 99.9, PJ 836 muscle and                                
                                              intestine in common, PJ 1005I0.05M0.001, PJ 1445                                   
                                              M0.05I0.001, PJ 1617  Muscle and intestine in common,                              
                                              PJ 1899 IntestineMuscleCon95incommon, PJ 3085                                      
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No4 first1500, PJ No5 first                              
                                              1500, PJ No8 First 1500, PJ No10-1-R16 First 1500, PJ                              
                                              No10-1-R15 First 1500, PJRGDPAPER-Collagens (All),                                 
                                              PJRGDPAPER-Collagens (Non-BM), PJRGDPAPER-Collagens                                
                                              (unspecified), PJRPAPER-1329 L1 Muscle Genes (Chromo                               
                                              V), PJRPAPER-1329 L1 Muscle List (genes within 10,                                 
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-Cuticle Collagens, PJRPAPER-Cuticle Collogens                             
                                              Grp1a, PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1                                  
                                              Muscle Genes (1364), PJRPAPER-zL1 Muscle Genes,                                    
                                              PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                                    
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev up,                                         
                                              PJRPAPER-zU29-Genes, Proteome LG V [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin, YK muscle-specific genes                                      

B0228.4 B0228.4 P W All gene names: tag-308; B0228.4; 2I41; CE31282; CE37469; CE37470; CE37471; CE39660; WBGene00015061; WP:CE31282; WP:CE37469; WP:CE37470; WP:CE37471; WP:CE39660
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount01, R=0.15,                                 
                                              GDPAPER-Prelim Mixed Muscle, Peter's All Muscle Genes                              
                                              (1 16 01), Peter's L1 Muscle Genes (95 Con; 02-01-01),                             
                                              Peter's UP-Reg Muscle (10 25 00), PJ No10-1-R16 First                              
                                              1500, PJRPAPER-Chromosome II Genes, PJRPAPER-L1 Muscle                             
                                              Genes (95), Proteome Cell Role (Oct 2000)- Genes of                                
                                              Unknown Ce, Proteome LG II [May 2002], Reinke et al                                
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, YK genes 95% different in muscle                             
                                              and intestin                                                                       

B0238.10 B0238.10 P W All gene names: B0238.10; 5F753; CE07700; WBGene00015074; WP:CE07700 WormBase description: acyltransfersase
                                              
Member of lists ( lists):
                                              Proteome Cell Role (Oct 2000)- Genes                              
                                              of Unknown Ce, Proteome LG V [May 2002], Reinke et al                              
                                              2004, list of genes in cluster order, rosetta, wmyst                               

B0238.11 B0238.11 P W All gene names: B0238.11; B0238.11.1; B0238.11.2; 5F747; CE07701; WBGene00015075; WP:CE07701
                                              
Member of lists ( lists):
                                               mount18, R=0.38,  stuart layer13,                                
                                              Aging.p01, GD-Chol NSD/AMB, GD-L1 Muscle Genes, GD-Lev                             
                                              Muscle Genes, GD-U29-Sp (wrt Lev 95), GD-U29 muscle                                
                                              genes, Germ line-enriched, josh laura2 4/8 common, JW                              
                                              1703 merged Peters zMuscle 8-02, Peter's Acetyl-P001                               
                                              Superset, Peter's All Muscle Genes (1 16 01), Peter's                              
                                              Dorsal List (02-19-01), Peter's L1-Dorsal+Excr avg                                 
                                              (99.9), Peter's L1 Muscle Genes (95 Con; 02-01-01),                                
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's                                      
                                              Muscle-Neuro Ubiq (99.9 Superset list), Peter's Neuro                              
                                              (95; 06-18-01), Peter's Neuro (99; 06-18-01), Peter's                              
                                              Superset of L1-L2 Genes (considering 99.9, PJ 836                                  
                                              muscle and intestine in common, PJ 1005I0.05M0.001, PJ                             
                                              1445 M0.05I0.001, PJ 1617  Muscle and intestine in                                 
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No4 first1500, PJ No5 first                              
                                              1500, PJ No8 First 1500, PJRPAPER-1329 L1 Muscle Genes                             
                                              (Chromo V), PJRPAPER-1329 L1 Muscle List (genes without                            
                                              1, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V                                 
                                              Genes, PJRPAPER-L1 Muscle Genes (unknowns from 1329,                               
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1 Muscle Genes                            
                                              (1364), PJRPAPER-zL1 Muscle Genes, PJRPAPER-zL1vL2 nsd,                            
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev nsd,                                        
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG V [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

B0238.9 B0238.9 P W All gene names: B0238.9; 5F754; CE32558; WBGene00015073; WP:CE32558
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              josh laura1/2 common, PJ 3085 intestinal genes, PJ 3118                            
                                              intestinal genes, PJ 4746 intestinal gene Con95, PJ                                
                                              No10-1-R15 First 1500, PJ No10-1-R16 First 1500,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, Valerie Reinke's 11927 genes                               

B0240.2 B0240.2 P W All gene names: spe-42; B0240.2; 5M214; CE39310; WBGene00007117; WP:CE39310
                                              
Member of lists ( lists):
                                              Proteome LG V [May 2002], Reinke et al                            
                                              2004, list of genes in cluster order                                               

B0244.2 B0244.2 P W All gene names: ida-1; B0244.2; B0244.2.1; B0244.2.2; 3G855; CE31867; NM_065844; WBGene00002048; WP:CE31867; ia2 WormBase description: ida-1 encodes a protein tyrosine phosphatase-like receptor, orthologous to the mammalian type I diabetes autoantigens IA-2 and phogrin that are expressed in dense core vesicles of neuroendocrine tissue and involved in regulated protein secretion; in C. elegans, IDA-1 appears to be required for regulating presynaptic neurotransmission and in particular, for the neuropeptidergic control of egg-laying; ida-1 interacts genetically with unc-31 and unc-64, which encode proteins required for dense core vesicle fusion and exocytosis; ida-1 expression is detected in a subset of neurons in the anterior nerve ring, the ventral nerve cord, the tail, and the vulva, including the VC vulval motoneurons and the HSN egg-laying neurons; ida-1 is also detected in the vulval uv1 cells, non-neuronal cells that contain neurosecretory-like vesicles. WormBase CDS description: protein tyrosine phosphatase
                                              
Member of lists ( lists):
                                               mount01, R=0.15,  mount06, R=0.21, JW                            
                                              Dauer Enriched AdjT0 vs AdjT12, JW SAGE p<0.001 (292),                             
                                              male99, Male-enriched, Neuro-1 L1 Upreg (11 20 00), PJ                             
                                              2378 IntestineMusclettest0.01, PJ 4212                                             
                                              IntestineMuscleTtest0.05, PJ No5 first 1500, PJ No 2                               
                                              first 1500, PJRPAPER-Chromosome III Genes,                                         
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-Male Genes,                                  
                                              Protein phosphatases, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome Cell Role (Oct 2000)-                                
                                              Signal Transduction, Proteome LG III [May 2002], Reinke                            
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin                                                                

B0244.9 B0244.9 P W All gene names: B0244.9; 3G820; CE01756; WBGene00015084; WP:CE01756
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, josh                                   
                                              laura1/2 common, PJ 1158IntestineMuscleTTEST0.001, PJ                              
                                              1235 intestine-sepcific, PJ 2378                                                   
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No10-1-R15 First 1500, PJ No10-1-R16 First                               
                                              1500, PJRPAPER-Chromosome III Genes, PJRPAPER-Muslce                               
                                              (L1) negative controls-2, Proteome Cell Role (Oct                                  
                                              2000)- Genes of Unknown Ce, Proteome LG III [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order, YK                              
                                              genes 95% different in muscle and intestin                                         

B0252.5 B0252.5 P W All gene names: B0252.5; 2H206; CE02421; WBGene00015089; WP:CE02421
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Art-1-7, GD-Chol                                
                                              "\/", GD-U29 muscle genes, GD-U29-Sp (wrt L1 95), josh                             
                                              laura1/2 common, JW SAGE mixed stage, male99, Peter's                              
                                              Acetyl-P001 Superset, PJ 1158IntestineMuscleTTEST0.001,                            
                                              PJ 1235 intestine-sepcific, PJ 2378                                                
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome II                            
                                              Genes, PJRPAPER-Male Genes, PJRPAPER-Muslce (L1)                                   
                                              negative controls-2, PJRPAPER-xU29-specific (wrtWT),                               
                                              PJRPAPER-zU29WLev down-up, PJRPAPER-zU29-Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG II [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, SylviaAll 144, Valerie Reinke's                            
                                              11927 genes                                                                        

B0261.6 B0261.6 P W All gene names: B0261.6; 1F824; CE29532; CE39549; WBGene00015094; WP:CE29532; WP:CE39549
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount04, R=0.41,                                 
                                              Art-1-7, Neuro-1 L1 Upreg (11 20 00), Peter's L2 Muscle                            
                                              (95 Con; 02-01-01), PJ 1235 intestine-sepcific, PJ 3085                            
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4212                                
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome I Genes, PJRPAPER-Muslce                                
                                              (L1) negative controls-2, PJRPAPER-Sperm Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Sperm-enriched,                                   
                                              Valerie Reinke's 11927 genes                                                       

B0272.3 B0272.3 P W All gene names: B0272.3; CE00852; WBGene00007129; WP:CE00852; XK51 WormBase description: 3-hydroxyacyl-CoA dehydrogenase
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount24, R=0.37,                                 
                                              stuart layer7, Bea L2 mixed 709, Bea Ras L2 time course                            
                                              (99%), Biosynthesis, Fatty acid oxidation genes, FP                                
                                              1938 Intestine genes, JW AdjD T0 vs L1 T0 short 254, JW                            
                                              Dauer ANOVA 2430 v4, JW Dauer Enriched by AdjDT0 vs                                
                                              L1T0, JW Dauer Recovery Specific 1984, JW Late 325,                                
                                              Lipid metabolism genes, PJ No4 first1500,                                          
                                              PJRPAPER-Chromosome X Genes, PJRPAPER-Lipid, fatty-acid                            
                                              and sterol metabolism, PJRPAPER-Oxidoreductase,                                    
                                              Proteome Cell Role (Oct 2000)- Lipid, Sterol & Fat,                                
                                              Proteome Funct Class (Mar 2000)-Oxidoreductases,                                   
                                              Proteome LG X [May 2002], rasl2, Reinke et al 2004,                                
                                              list of genes in cluster order, rosetta, Valerie                                   
                                              Reinke's 11927 genes                                                               

B0273.1 B0273.1 P W All gene names: B0273.1; 4G259; CE16787; WBGene00015097; WP:CE16787
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Aging p < .01,                                  
                                              GDPAPER-Prelim Mixed Muscle, male99, Male-enriched,                                
                                              Peter's All Muscle Genes (1 16 01), Peter's Dorsal List                            
                                              (02-19-01), Peter's L1-Dorsal+Excr avg (99.9), Peter's                             
                                              UP-Reg Muscle (10 25 00), PJ 4746 intestinal gene                                  
                                              Con95, PJ No5 first 1500, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-Male Genes, PJRPAPER-Muscle negative controls,                            
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

B0273.2 B0273.2 P W All gene names: puf-7; B0273.2; B0273.2.1; B0273.2.2; 4G253; CE16788; NM_068419; WBGene00004243; WP:CE16788 WormBase description: puf-7 encodes a protein 97% identical to PUF-6 and functions redundantly with the other PUF genes, fbf-1, fbf-2, puf-6, and puf-8, during primordial germ cell development, based on combinatorial RNAi; interacts with NOS-2 in yeast two-hybrid screens.
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              Art-1-7, Germ line-enriched, PJ No 2 first 1500,                                   
                                              PJRPAPER-Chromosome IV Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome Funct Class (Mar                              
                                              2000)-RNA-Binding Subuni, Proteome LG IV [May 2002],                               
                                              Reinke et al 2004, list of genes in cluster order, RNA                             
                                              binding, rosetta, Valerie Reinke's 11927 genes                                     

B0280.10 B0280.10 P W All gene names: B0280.10; 3I222; CE29533; WBGene00015105; WP:CE29533
                                              
Member of lists ( lists):
                                               mount07, R=0.43, PJ                                              
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome III Genes, Proteome Cell                                
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG III                              
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

B0280.2 B0280.2 P W All gene names: B0280.2; 3I215; CE37473; WBGene00015100; WP:CE37473
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  stuart layer12, FP                               
                                              645 Intestine specific genes, FP 1938 Intestine genes,                             
                                              PJ 4746 intestinal gene Con95, PJRPAPER-Chromosome III                             
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG III [May 2002], Reinke et al 2004, list                            
                                              of genes in cluster order, rosetta, YK genes 95%                                   
                                              different in muscle and intestin, YK intestinal genes                              
                                              (p<.001), YK intestine-specific genes                                              

B0280.9 B0280.9 P W All gene names: B0280.9; 3I212; CE00816; WBGene00015104; WP:CE00816
                                              
Member of lists ( lists):
                                               stuart layer7, Germ line-enriched,                               
                                              josh laura2 4/8 common, JW Dauer Enriched by AdjDT0 vs                             
                                              L1T0, PJRPAPER-Chromosome III Genes, Proteome Cell Role                            
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG III [May                              
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes, wmyst                                

B0281.1 B0281.1 P W All gene names: B0281.1; 2C603; CE07712; WBGene00015108; WP:CE07712
                                              
Member of lists ( lists):
                                              Proteome Cell Role (Oct 2000)- Genes                              
                                              of Unknown Ce, Proteome LG II [May 2002], Reinke et al                             
                                              2004, list of genes in cluster order                                               

B0281.5 B0281.5 P W All gene names: B0281.5; 2C588; CE07716; WBGene00015112; WP:CE07716
                                              
Member of lists ( lists):
                                               mount12, R=0.29, JW SAGE mixed stage,                            
                                              PJ 2378 IntestineMusclettest0.01, PJ 4212                                          
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome II Genes,                            
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Potassium channel subunits, Proteome Cell Role                            
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG II [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

B0285.5 B0285.5 P W All gene names: hse-5; B0285.5; 3F435; CE36681; NM_065475; WBGene00002003; WP:CE36681 WormBase description: hse-5 encodes a D-glucuronyl C5-epimerase.
                                              
Member of lists ( lists):
                                              400 N2 hs min (egg), 1003 N2 hs min                               
                                              (egg + L2),  mount02, R=0.15,  stuart layer13, daf-16                              
                                              p<.001, 7-01, Eggs HS genes 99.9%, GD-Chol Down,                                   
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes, GD-U29-Sp                             
                                              (wrt L1 95), Peter's Acetyl-P001 Superset, Peter's                                 
                                              Neuro (95; 06-18-01), PJ No8 First 1500,                                           
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-xU29-specific (wrtWT),                                             
                                              PJRPAPER-zU29WLev down, PJRPAPER-zU29-Genes, Proteome                              
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              III [May 2002], Reinke et al 2004, list of genes in                                
                                              cluster order, rosetta, YK genes 95% different in                                  
                                              muscle and intestin                                                                

B0285.8 B0285.8 P W All gene names: ckb-1; B0285.8; 3F455; CE33590; NM_065478; WBGene00000511; WP:CE33590 WormBase description: choline kinase
                                              
Member of lists ( lists):
                                               mount24, R=0.37, operon first genes,                             
                                              PJ 2378 IntestineMusclettest0.01, PJ 4212                                          
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome III                                  
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG III [May 2002], Reinke et al 2004, list                            
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes, YK genes 95% different in muscle and                                  
                                              intestin                                                                           

B0285.9 B0285.9 P W All gene names: ckb-2; B0285.9; 3F459; CE33591; NM_065479; WBGene00000512; WP:CE33591 WormBase description: choline kinase
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  Bea ras L2 mixed 561,  bea RasL2 486                                  
                                              genes,  mount02, R=0.15, Bea L2 mixed 709, Bea Ras L2                              
                                              time course (99%), JW Dauer ANOVA 2430 v4, JW Dauer                                
                                              Recovery Specific 1984, JW Early 538, JW SAGE mixed                                
                                              stage, L2 Hs genes 99.9, Lipid metabolism genes,                                   
                                              Peter's Acetyl-P001 Superset, PJ 2378                                              
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Cholin Superset,                                
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-Lipid,                                     
                                              fatty-acid and sterol metabolism,                                                  
                                              PJRPAPER-xU29-specific (wrtWT), PJRPAPER-zU29WLev                                  
                                              down-up, PJRPAPER-zU29-Genes, Proteome Cell Role (Oct                              
                                              2000)- Lipid, Sterol & Fat, Proteome Funct Class (Mar                              
                                              2000)-Other Kinases, Proteome Funct Class (Mar                                     
                                              2000)-Transferase, Proteome LG III [May 2002], Proteome                            
                                              Localization (Oct 2000)-Cytoplasmic, rasl2, Reinke et                              
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              sir2.1ok434 283 min, sir2.1--ok434all 558 min, Valerie                             
                                              Reinke's 11927 genes, wmyst, YK genes 95% different in                             
                                              muscle and intestin                                                                

B0286.2 B0286.2 P W All gene names: lat-2; tag-12; B0286.2; 2E657; CE36968; CE39661; NM_062369; WBGene00002252; WP:CE36968; WP:CE39661 WormBase description: lat-2 encodes a predicted transmembrane protein that is homologous to vertebrate latrophilins, alpha-latrotoxin binding proteins that are members of the Class B/secretin family of G protein-coupled receptors; by homology, LAT-2 is predicted to function as a peptide hormone receptor that couples ligand binding to heterotrimeric G protein-mediated stimulation of secretion; lat-2 is expressed in the g1 gland cells and in the arcade cells in the head, and its expression has been reported to cycle with larval molts; as loss of lat-2 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of LAT-2 in C. elegans development and/or behavior is not yet known.
                                              
Member of lists ( lists):
                                               mount13, R=0.10, Bea lectin, Peter's                             
                                              Lev UP unc-29 DOWN (anova+10), PJRPAPER-Chromosome II                              
                                              Genes, PJRPAPER-GPCRs (not redundant), Proteome Cell                               
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG II                               
                                              [May 2002], Proteome Localization (Oct                                             
                                              2000)-Unspecified membr, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0286.3 B0286.3 P W All gene names: B0286.3; 2E660; CE03863; WBGene00015116; WP:CE03863 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: saicar synthetase/air carboxlyase
                                              
Member of lists ( lists):
                                               mount08, R=0.21, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, daf-2 1384 min, daf-2 1384                               
                                              InAgingSetMin3ClusterA, daf-16 p<.001, 7-01, daf-16 (p                             
                                              < .001), FP 645 Intestine specific genes, FP 1938                                  
                                              Intestine genes, josh laura1/2 common, JW Nucleotide                               
                                              Metabolism, PJ 4746 intestinal gene Con95,                                         
                                              PJRPAPER-Chromosome II Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG II [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, sir2.1ok434 283 min, sir2.1--ok434all 558 min,                            
                                              YK genes 95% different in muscle and intestin, YK                                  
                                              intestinal genes (p<.001), YK intestine-specific genes                             

B0303.9 B0303.9 P W All gene names: SLP-1; B0303.9; 3J791; CE00539; WBGene00015130; WP:CE00539 WormBase description: SLP-1
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount07, R=0.43,                                 
                                              PJRPAPER-Chromosome III Genes, Proteome Cell Role (Oct                             
                                              2000)- Genes of Unknown Ce, Proteome LG III [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

B0304.2 B0304.2 P W All gene names: B0304.2; 2E815; CE02424; WBGene00015134; WP:CE02424
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, Germ                                   
                                              line-enriched, josh laura1/2 common, Peter's L1 Muscle                             
                                              Genes (95 Con; 02-01-01), PJRPAPER-Chromosome II Genes,                            
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG II                               
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

B0304.3 B0304.3 P W All gene names: cyp-23A1; B0304.3; 2E805; CE27050; NM_062396; WBGene00015135; WP:CE27050 WormBase description: The B0304.3 gene encodes a homolog of the human gene CYP7B1, which when mutated leads to giant cell hepatitis (OMIM:231100). WormBase CDS description: Cytochrome P450
                                              
Member of lists ( lists):
                                               mount01, R=0.15, Cytochrome P450                                 
                                              genes, JW Common Kinetics 446 v3, JW Dauer ANOVA 2430                              
                                              v4, JW P450s Full, Lipid metabolism genes,                                         
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Lipid,                                      
                                              fatty-acid and sterol metabolism,                                                  
                                              PJRPAPER-Oxidoreductase, PJRPAPER-P450, Proteome Cell                              
                                              Role (Oct 2000)- Lipid, Sterol & Fat, Proteome Funct                               
                                              Class (Mar 2000)-Oxidoreductases, Proteome LG II [May                              
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

B0310.5 B0310.5 P W All gene names: ugt-46; B0310.5; CE03878; WBGene00015141; WP:CE03878; XB146 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount27, R=0.48, Bea                             
                                              UDP-glucuronosyltransferase, JW Common Kinetics 446 v3,                            
                                              JW Dauer ANOVA 2430 v4, JW UDP-glucoronosyltransferase,                            
                                              Lipid metabolism genes, PJ No 2 first 1500,                                        
                                              PJRPAPER-Chromosome X Genes, PJRPAPER-Lipid, fatty-acid                            
                                              and sterol metabolism, Proteome Cell Role (Oct 2000)-                              
                                              Lipid, Sterol & Fat, Proteome Funct Class (Mar                                     
                                              2000)-Transferase, Proteome LG X [May 2002], Reinke et                             
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              Valerie Reinke's 11927 genes                                                       

B0310.6 B0310.6 P W All gene names: B0310.6; CE03879; WBGene00015142; WP:CE03879; XB150
                                              
Member of lists ( lists):
                                              703 InParaquatMin 109,  mount29,                                  
                                              R=0.53, age1-216daf2-1384All In age1daf2 modif 703 mi,                             
                                              daf-2 1384 InAgingSetMin3ClusterB, daf-2 1384 min,                                 
                                              GD-Chol NSD/AMB, GD-U29 muscle genes, GD-U29-Sp (wrt L1                            
                                              95), GDPAPER-Prelim Mixed Muscle, JW Dauer ANOVA 2430                              
                                              v4, JW Dauer Recovery Specific 1984, JW Late 325,                                  
                                              Peter's Acetyl-P001 Superset, Peter's All Muscle Genes                             
                                              (1 16 01), Peter's Dorsal List (02-19-01), Peter's                                 
                                              L1-Dorsal+Excr avg (99.9), PJ 4746 intestinal gene                                 
                                              Con95, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome X                             
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              PJRPAPER-xU29-specific (wrtWT), PJRPAPER-zU29WLev nsd,                             
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG X [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order                                         

B0334.1 B0334.1 P W All gene names: B0334.1; B0334.1.1; B0334.1.2; 2L776; CE02932; WBGene00007142; WP:CE02932 WormBase description: Transthyretin-like family
                                              
Member of lists ( lists):
                                               mount08, R=0.21, FP 1311 similar in                              
                                              intestine and muscle, FP 1938 Intestine genes, GD-Chol                             
                                              Down, GD-GABA Down (Anova/TTest), GD-L1 Muscle Genes,                              
                                              GD-L1-Sp (99.0 M-W) Muscle Genes, GD-L1-Sp (95 TTest),                             
                                              GD-Musc muscle, GD-U25 muscle, GD-U29-Sp (wrt Lev 95),                             
                                              GD-U29 muscle genes, GD-WT-Sp (wrt Lev 95), JW 1703                                
                                              merged Peters zMuscle 8-02, JW AdjD T0 vs AdjD T12                                 
                                              short 406, JW Dauer ANOVA 2430 v4, JW Dauer Enriched                               
                                              AdjT0 vs AdjT12, JW Dauer Recovery Specific 1984, JW                               
                                              Down 540, JW Down Early 378, Peter's Acetyl-P001                                   
                                              Superset, Peter's All Muscle Genes (1 16 01), Peter's                              
                                              L1 Muscle Genes (95 Con; 02-01-01), Peter's L2 Muscle                              
                                              (95 Con; 02-01-01), Peter's Muscle-Neuro Ubiq (99.9                                
                                              Superset list), Peter's Neuro (95; 06-18-01), Peter's                              
                                              Neuro (99; 06-18-01), Peter's Neuro (99.9; 06-18-01),                              
                                              Peter's Superset of L1-L2 Genes (considering 99.9, PJ                              
                                              836 muscle and intestine in common, PJ 1005I0.05M0.001,                            
                                              PJ 1445 M0.05I0.001, PJ 1617  Muscle and intestine in                              
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No5 first 1500, PJ No8 First                             
                                              1500, PJRPAPER-1329 L1 Muscle Genes (Chromo II),                                   
                                              PJRPAPER-1329 L1 Muscle List (genes without 1,                                     
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome II Genes,                            
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1 Muscle Genes                            
                                              (1364), PJRPAPER-xWT-specific (wrtLEV), PJRPAPER-zL1                               
                                              Muscle Genes, PJRPAPER-zL1-Specific Genes,                                         
                                              PJRPAPER-zU29WLev down, PJRPAPER-zU29-Genes, Proteome                              
                                              Cell Role (Oct 2000)- Small Molecule Tran, Proteome                                
                                              Funct Class (Mar 2000)-Channel (Passive T, Proteome LG                             
                                              II [May 2002], Proteome Localization (Oct                                          
                                              2000)-Unspecified membr, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK intestinal genes (p<.001), YK Similar muscle                             
                                              and intestine genes                                                                

B0334.10 B0334.10 P W All gene names: B0334.10; 2L811; CE19660; WBGene00007148; WP:CE19660
                                              
Member of lists ( lists):
                                               mount04, R=0.41, male99,                                         
                                              Male-enriched, PJ No8 First 1500, PJRPAPER-Chromosome                              
                                              II Genes, PJRPAPER-Male Genes, PJRPAPER-Muslce (L1)                                
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG II [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, YK genes                               
                                              95% different in muscle and intestin                                               

B0334.11 B0334.11 P W All gene names: mel-19; ooc-3; B0334.11; 2L784; CE19661; CE32788; NM_064055; NM_182110; WBGene00003868; WP:CE19661; WP:CE32788 WormBase description: ooc-3 encodes a nematode-specific protein with a predicted signal sequence, four predicted transmembrane domains, and two putative PEST sequences; OOC-3 is probably localized to the endoplasmic reticulum (ER), and is maternally required for correct localization of PAR-2 and PAR-3 in the P1 blastomere of the two-cell stage embryo; specifically, OOC-3 is required for restricting PAR-3 to the anterior cortex of the P1 blastomere to assure PAR-2 localization at the posterior cortex; more generally, OOC-3 is required to establish asymmetrical anterior-posterior cortical domains and spindle orientation in P1.
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer13,                                
                                              Aging.p01, josh laura2 4/8 common, JW Dauer Enriched                               
                                              AdjT0 vs AdjT12, operon first genes, PJ 1235                                       
                                              intestine-sepcific, PJ 3085 intestinal genes, PJ 3118                              
                                              intestinal genes, PJ 4212 IntestineMuscleTtest0.05, PJ                             
                                              4746 intestinal gene Con95, PJ No8 First 1500,                                     
                                              PJRPAPER-Chromosome II Genes, Proteome LG II [May                                  
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

B0334.4 B0334.4 P W All gene names: B0334.4; 2L787; CE02936; WBGene00007144; WP:CE02936 WormBase description: Yeast hypothetical protein L8167.12 like
                                              
Member of lists ( lists):
                                               mount07, R=0.43, FP 1311 similar in                              
                                              intestine and muscle, FP 1938 Intestine genes, GD-Chol                             
                                              NSD/AMB, GD-GABA Down (Anova/TTest), GD-L2 Muscle                                  
                                              Genes, GD-Lev Muscle Genes, GD-U25 muscle, GD-U29                                  
                                              muscle genes, GD-U29-Sp (wrt L1 95), Germ                                          
                                              line-enriched, JW 1703 merged Peters zMuscle 8-02,                                 
                                              operon first genes, Peter's Acetyl-P001 Superset,                                  
                                              Peter's All Muscle Genes (1 16 01), Peter's L1 Muscle                              
                                              Genes (95 Con; 02-01-01), Peter's L2 Muscle (95 Con;                               
                                              02-01-01), Peter's Muscle-Neuro Ubiq (99.9 Superset                                
                                              list), Peter's Neuro (95; 06-18-01), Peter's Neuro (99;                            
                                              06-18-01), Peter's Neuro (99.9; 06-18-01), Peter's                                 
                                              Superset of L1-L2 Genes (considering 99.9, PJ 1445                                 
                                              M0.05I0.001, PJ 1617  Muscle and intestine in common,                              
                                              PJ 1899 IntestineMuscleCon95incommon, PJ 3085                                      
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No10-1-R16 First 1500, PJ                                
                                              No10-1-R15 First 1500, PJRPAPER-Cholin Superset,                                   
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-L1 Muscle Genes                             
                                              (95), PJRPAPER-xU29-specific (wrtWT), PJRPAPER-zL1vL2                              
                                              nsd, PJRPAPER-zL2 Muscle Genes, PJRPAPER-zLev-Genes,                               
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes,                                        
                                              PJRPAPERz-L2 Clustered (inc Operons not Paral,                                     
                                              PJRPAPERz-L2 Clustered(without Paralogues wit, Proteome                            
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              II [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              YK intestinal genes (p<.001)                                                       

B0334.8 B0334.8 P W All gene names: age-1; daf-23; B0334.8; 2L810; CE23506; NM_064061; WBGene00000090; WP:CE23506 WormBase description: age-1 encodes the C. elegans ortholog of the phosphoinositide 3-kinase (PI3K) p110 catalytic subunit; AGE-1, supplied maternally and embryonically, is a central component of the C. elegans insulin-like signaling pathway, lying downstream of the DAF-2/insulin receptor and upstream of both the PDK-1 and AKT-1/AKT-2 kinases and the DAF-16 forkhead type transcription factor, whose negative regulation is the key output of the insulin signaling pathway; in accordance with its role in insulin signaling, AGE-1 activity is required for regulation of metabolism, life span, dauer formation, stress resistance, fertility, and embryonic development; although the age-1 expression pattern has not yet been reported, ectopic expression studies indicate that pan-neuronal age-1 expression is sufficient to rescue life-span defects, while neuronal, intestinal, or muscle expression can partially rescue dauer formation, and neuronal or muscle expression can rescue metabolic defects. WormBase CDS description: phosphatidylinositol 3-kinase
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  mount02, R=0.15,  stuart layer13, Art-1-7,                            
                                              Dauer, embry devel, GD-Chol Down, GD-GABA NSD/AMB                                  
                                              (Anova/TTest), GD-Musc muscle, GD-U29-Sp (wrt Lev 95),                             
                                              GD-U29 muscle genes, general, general cell funcs,                                  
                                              Insulin Signaling, L2 Hs genes 99.9, Peter's                                       
                                              Acetyl-P001 Superset, PJ 4746 intestinal gene Con95, PJ                            
                                              No10-1-R15 First 1500, PJ No10-1-R16 First 1500,                                   
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome II Genes,                            
                                              PJRPAPER-Tyrosine Kinase, PJRPAPER-zU29WLev down,                                  
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Signal Transduction, Proteome Funct Class (Mar                                     
                                              2000)-Other Kinases, Proteome LG II [May 2002],                                    
                                              Proteome Localization (Oct 2000)-Cytoplasmic, Reinke et                            
                                              al 2004, list of genes in cluster order, SylviaAll 144                             

B0336.11 B0336.11 P W All gene names: B0336.11; 3G798; CE32296; CE39202; WBGene00015148; WP:CE32296; WP:CE39202
                                              
Member of lists ( lists):
                                               mount06, R=0.21, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, Aging p < .01, daf-2 1384                                
                                              min, daf-2 1384 InAgingSetMin3ClusterB, FP 464 Muscle                              
                                              specific genes, GD-Chol NSD/AMB, GD-GABA NSD/AMB                                   
                                              (Anova/TTest), GD-L1 Muscle Genes, GD-L2 Muscle Genes,                             
                                              GD-Lev Muscle Genes, GD-U25 muscle, GD-U29 muscle                                  
                                              genes, GDPAPER-Prelim Mixed Muscle, JW 1703 merged                                 
                                              Peters zMuscle 8-02, JW Dauer ANOVA 2430 v4, JW Dauer                              
                                              Recovery Specific 1984, JW Early 538, Peter's                                      
                                              Acetyl-P001 Superset, Peter's All Muscle Genes (1 16                               
                                              01), Peter's L1 Muscle Genes (95 Con; 02-01-01),                                   
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's                                      
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, Peter's                                 
                                              UP-Reg Muscle (10 25 00), PJRPAPER-1329 L1 Muscle Genes                            
                                              (Chromo III), PJRPAPER-1329 L1 Muscle List (genes                                  
                                              within 10, PJRPAPER-Cholin Superset,                                               
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-CLustered                                  
                                              muscle genes (12 16 01), PJRPAPER-L1 Muscle Genes (95),                            
                                              PJRPAPER-L1 Muscle Genes (1364), PJRPAPER-zL1 Muscle                               
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                             
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev nsd,                                        
                                              PJRPAPER-zU29-Genes, PJRPAPERz-L1 Cluster (10 kb; no                               
                                              para or ops), PJRPAPERz-L1 Clustered(without Paralogues                            
                                              wit, PJRPAPERz-L2 Clustered (inc Operons not Paral,                                
                                              PJRPAPERz-L2 Clustered(without Paralogues wit, Proteome                            
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              III [May 2002], Proteome Localization (Oct 2000)-Other                             
                                              vesicles of, Reinke et al 2004, list of genes in                                   
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              YK genes 95% different in muscle and intestin, YK                                  
                                              muscle-specific genes                                                              

B0336.3 B0336.3 P W All gene names: B0336.3; 3G803; CE29542; WBGene00015143; WP:CE29542
                                              
Member of lists ( lists):
                                               mount05, R=0.22, operon first genes,                             
                                              PJRPAPER-Chromosome III Genes, Proteome Cell Role (Oct                             
                                              2000)- Genes of Unknown Ce, Proteome LG III [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

B0336.5 B0336.5 P W All gene names: B0336.5; 3G781; CE26356; CE29544; WBGene00015145; WP:CE26356; WP:CE29544
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              Aging p < .01, Aging.p01, Art-1-7, daf-16 p<.001, 7-01,                            
                                              daf-16 (p < .001), Germ line-enriched, operon first                                
                                              genes, Peter's L2 Muscle (95 Con; 02-01-01), Peter's                               
                                              Neuro (95; 06-18-01), Peter's Neuro (99; 06-18-01),                                
                                              Peter's Neuro (99.9; 06-18-01), PJ 1235                                            
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Chromosome III Genes,                                              
                                              PJRPAPER-Transcription factors (good list), Proteome                               
                                              Cell Role (Oct 2000)- Pol II Transcriptio, Proteome                                
                                              Funct Class (Mar 2000)-Transcription Fact, Proteome LG                             
                                              III [May 2002], Proteome Localization (Oct                                         
                                              2000)-Nuclear, Reinke et al 2004, list of genes in                                 
                                              cluster order, RNA pol II transcription, rosetta,                                  
                                              Valerie Reinke's 11927 genes, wmyst                                                

B0336.6 B0336.6 P W All gene names: B0336.6; B0336.6.1; B0336.6.2; 3G780; CE29545; WBGene00015146; WP:CE29545 WormBase description: B0336.6 encodes an Abl interactor ortholog, with an SH3 domain, required for embryonic development; mammalian Abl interactors are associated with synaptosomes, growth cone particles, and macropinocytic vesicles, and may regulate Rac-dependent cytoskeletal reorganization and Abl kinase activity; B0336.6's orthologs include human SSH3BP1 (ABI1; OMIM:603050, mutated in acute myeloid leukemia), ABI-2 (OMIM:606442), and NESH (OMIM:606363); B0336.6 binds UNC-53 in two-hybrid screens.
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer7,                                 
                                              stuart layer11, Art-1-7, Germ line-enriched, josh                                  
                                              laura2 4/8 common, Peter's L1 Muscle Genes (95 Con;                                
                                              02-01-01), PJ 1235 intestine-sepcific, PJ 1445                                     
                                              M0.05I0.001, PJ 1617  Muscle and intestine in common,                              
                                              PJ 1899 IntestineMuscleCon95incommon, PJ 3085                                      
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4212                                
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No5 first 1500, PJ No10-1-R15 First 1500, PJ                             
                                              No10-1-R16 First 1500, PJRPAPER-Chromosome III Genes,                              
                                              PJRPAPER-L1 Muscle Genes (95), Proteome Cell Role (Oct                             
                                              2000)- Genes of Unknown Ce, Proteome LG III [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

B0336.7 B0336.7 P W All gene names: B0336.7; B0336.7b.1; B0336.7b.2; 3G784; CE29546; CE37741; WBGene00015147; WP:CE29546; WP:CE37741
                                              
Member of lists ( lists):
                                               mount02, R=0.15,  stuart layer13,                                
                                              Aging.p01, daf-16 p<.001, 7-01, daf-16 (p < .001), FP                              
                                              645 Intestine specific genes, FP 1311 similar in                                   
                                              intestine and muscle, FP 1938 Intestine genes, josh                                
                                              laura2 4/8 common, Peter's L1 Muscle Genes (95 Con;                                
                                              02-01-01), Peter's Neuro (95; 06-18-01), Peter's Neuro                             
                                              (99; 06-18-01), PJ 1445 M0.05I0.001, PJ 1617  Muscle                               
                                              and intestine in common, PJ 1899                                                   
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJ No10-1-R15 First 1500, PJ No10-1-R16 First                               
                                              1500, PJ No 2 first 1500, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-L1 Muscle Genes (95), Proteome Cell                                
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG III                              
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, YK genes 95% different in muscle and                               
                                              intestin                                                                           

B0344.2 B0344.2 P W All gene names: wrt-9; B0344.2; CE33963; NM_075897; WBGene00006955; WP:CE33963; XC209
                                              
Member of lists ( lists):
                                               mount10, R=0.19,  mount14, R=0.38, JW                            
                                              Dauer ANOVA 2430 v4, JW Dauer Recovery Specific 1984,                              
                                              JW Late 325, PJ No8 First 1500, PJRPAPER-Chromosome X                              
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG X [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0348.5 B0348.5 P W All gene names: B0348.5; Y108G3B.A; 5A485; CE17330; WBGene00015153; WP:CE17330
                                              
Member of lists ( lists):
                                               mount01, R=0.15,  mount07, R=0.43,                               
                                              Art-1-7, FP 1938 Intestine genes, JW Dauer ANOVA 2430                              
                                              v4, JW Dauer Recovery Specific 1984, JW Late 325,                                  
                                              paraquat2way 79 min, PJ 4746 intestinal gene Con95, PJ                             
                                              No8 First 1500, PJ No10-1-R16 First 1500,                                          
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG V [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin, YK intestinal genes (p<.001)                                  

B0361.2 B0361.2 P W All gene names: B0361.2; 3I397; CE33549; CE38480; WBGene00015156; WP:CE33549; WP:CE38480
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount00, R=0.11,                                 
                                              mount07, R=0.43,  stuart layer13, GD-GABA NSD/AMB                                  
                                              (Anova/TTest), GD-Musc muscle, Hermaphrodite-enriched,                             
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4746 intestinal gene Con95, PJ No8 First 1500, PJ                                  
                                              No10-1-R15 First 1500, PJ No10-1-R16 First 1500,                                   
                                              PJRPAPER-Chromosome III Genes, Proteome Cell Role (Oct                             
                                              2000)- Genes of Unknown Ce, Proteome LG III [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

B0361.6 B0361.6 P W All gene names: B0361.6; 3I366; CE00835; WBGene00015160; WP:CE00835
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount05, R=0.22,                                 
                                              GD-L2 Muscle Genes, JW 1703 merged Peters zMuscle 8-02,                            
                                              JW Common Kinetics 446 v3, JW Dauer ANOVA 2430 v4,                                 
                                              Peter's All Muscle Genes (1 16 01), Peter's L1 Muscle                              
                                              Genes (95 Con; 02-01-01), Peter's L2 Muscle (95 Con;                               
                                              02-01-01), Peter's Superset of L1-L2 Genes (considering                            
                                              99.9, PJ 1445 M0.05I0.001, PJ 1617  Muscle and                                     
                                              intestine in common, PJ 1899                                                       
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome III Genes, PJRPAPER-L1                                  
                                              Muscle Genes (95), PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2                               
                                              Muscle Genes, Proteome Cell Role (Oct 2000)- Genes of                              
                                              Unknown Ce, Proteome LG III [May 2002], Reinke et al                               
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

B0361.7 B0361.7 P W All gene names: B0361.7; 3I374; CE32100; WBGene00015161; WP:CE32100 WormBase description: Acid phosphatase
                                              
Member of lists ( lists):
                                               mount02, R=0.15, GD-Chol "\/",                                   
                                              GD-GABA "\/" (Anova/TTest), GD-Lev Muscle Genes,                                   
                                              GD-Lev-Sp (wrt wt 95), GD-Musc muscle, Peter's Neuro                               
                                              (95; 06-18-01), PJ 1158IntestineMuscleTTEST0.001, PJ                               
                                              2378 IntestineMusclettest0.01, PJ 4212                                             
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome III Genes, PJRPAPER-Other                               
                                              Phosphotases, Proteome Cell Role (Oct 2000)- Genes of                              
                                              Unknown Ce, Proteome Funct Class (Mar 2000)-Hydrolase,                             
                                              Proteome Funct Class (Mar 2000)-Other Phosphotases,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

B0361.8 B0361.8 P W All gene names: B0361.8; 3I376; CE26792; WBGene00015162; WP:CE26792
                                              
Member of lists ( lists):
                                               mount07, R=0.43, FP 1311 similar in                              
                                              intestine and muscle, FP 1938 Intestine genes, GD-Chol                             
                                              NSD/AMB, GD-GABA NSD/AMB (Anova/TTest), GD-L2 Muscle                               
                                              Genes, GD-U25 muscle, GD-U29 muscle genes, JW 1703                                 
                                              merged Peters zMuscle 8-02, Peter's Acetyl-P001                                    
                                              Superset, Peter's All Muscle Genes (1 16 01), Peter's                              
                                              Dorsal List (02-19-01), Peter's L1-Dorsal+Excr avg                                 
                                              (99.9), Peter's L1 Muscle Genes (95 Con; 02-01-01),                                
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's Neuro                                
                                              (95; 06-18-01), Peter's Superset of L1-L2 Genes                                    
                                              (considering 99.9, PJ 1445 M0.05I0.001, PJ 1617  Muscle                            
                                              and intestine in common, PJ 1899                                                   
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJ No8 First 1500, PJ No10-1-R16 First 1500, PJ                             
                                              No10-1-R15 First 1500, PJRPAPER-Cholin Superset,                                   
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-zL1vL2 nsd,                                
                                              PJRPAPER-zL2 Muscle Genes, PJRPAPER-zU29WLev nsd,                                  
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Protein Modificatio, Proteome LG III [May 2002],                                   
                                              Proteome Localization (Oct 2000)-Unspecified membr,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK intestinal                               
                                              genes (p<.001)                                                                     

B0365.1 B0365.1 P W All gene names: B0365.1; 5N599; CE07719; WBGene00007150; WP:CE07719 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: ATP citrate lyase
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer9,                                 
                                              daf-16 p<.001, 7-01, GDPAPER-Prelim Mixed Muscle, josh                             
                                              laura1/2 common, JW Common Kinetics 446 v3, JW Dauer                               
                                              ANOVA 2430 v4, Peter's All Muscle Genes (1 16 01),                                 
                                              Peter's UP-Reg Muscle (10 25 00), PJ                                               
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRGDPAPER-Yeast Mito (All)-Worm Homologues,                                
                                              PJRGDPAPER-Yeast Mito (Prokaryotic)-Worm Homo,                                     
                                              PJRPAPER-Chromosome V Genes, Proteome Cell Role (Oct                               
                                              2000)- Genes of Unknown Ce, Proteome Funct Class (Mar                              
                                              2000)-Lyase, Proteome LG V [May 2002], Reinke et al                                
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, YK genes 95% different in muscle                             
                                              and intestin                                                                       

B0379.1 B0379.1 P W All gene names: B0379.1; 1K653; CE20452; WBGene00007155; WP:CE20452
                                              
Member of lists ( lists):
                                               mount06, R=0.21, Proteome Cell Role                              
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG I [May                                
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order                                                                              

B0379.2 B0379.2 P W All gene names: B0379.2; 1K644; CE07725; WBGene00007156; WP:CE07725
                                              
Member of lists ( lists):
                                               mount04, R=0.41, josh laura1/2                                   
                                              common, PJ 1235 intestine-sepcific, PJ 2378                                        
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No10-1-R16 First 1500, PJRPAPER-Chromosome I                             
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order                                                             

B0379.7 B0379.7 P W All gene names: B0379.7; B0379.7.1; B0379.7.2; 1K650; CE23508; WBGene00007159; WP:CE23508
                                              
Member of lists ( lists):
                                               mount04, R=0.41, josh laura1/2                                   
                                              common, male99, Male-enriched, PJ 3085 intestinal                                  
                                              genes, PJ 3118 intestinal genes, PJ 4746 intestinal                                
                                              gene Con95, PJ No10-1-R16 First 1500,                                              
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-Male Genes,                                  
                                              PJRPAPER-Muscle negative controls, PJRPAPER-Muslce (L1)                            
                                              negative controls-2, PJRPAPER-Sperm Genes, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              I [May 2002], Reinke et al 2004, list of genes in                                  
                                              cluster order, rosetta, Sperm-enriched, Valerie                                    
                                              Reinke's 11927 genes, YK genes 95% different in muscle                             
                                              and intestin                                                                       

B0393.2 B0393.2 P W All gene names: rbg-3; B0393.2; B0393.2.1; B0393.2.2; 3F845; CE00855; WBGene00007167; WP:CE00855 WormBase description: Probable rabGAP domains
                                              
Member of lists ( lists):
                                               mount07, R=0.43, FP 1938 Intestine                               
                                              genes, GD-Chol "\/", GD-Lev Muscle Genes, GD-Lev-Sp                                
                                              (wrt wt 95), GD-U29 muscle genes, GD-U29-Sp (wrt L1                                
                                              95), GDPAPER-Prelim Mixed Muscle, Oocyte-enriched,                                 
                                              Peter's Acetyl-P001 Superset, Peter's All Muscle Genes                             
                                              (1 16 01), Peter's UP-Reg Muscle (10 25 00), PJ                                    
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Cholin Superset,                                
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-Oocyte Genes,                              
                                              PJRPAPER-xLEV-specific (wrtWT), PJRPAPER-xU29-specific                             
                                              (wrtWT), PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev                                    
                                              down-up, PJRPAPER-zU29-Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG III [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK intestinal                               
                                              genes (p<.001), YK Similar muscle and intestine genes                              

B0393.3 B0393.3 P W All gene names: B0393.3; 3F849; CE00856; WBGene00007168; WP:CE00856 WormBase description: Leucine Rich Repeat (2 copies) (2 domains)
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer13,                                
                                              Oocyte-enriched, PJ 1158IntestineMuscleTTEST0.001, PJ                              
                                              1235 intestine-sepcific, PJ 2378                                                   
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No 2 first 1500, PJRPAPER-Chromosome III                                 
                                              Genes, PJRPAPER-Oocyte Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG III [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

B0393.4 B0393.4 P W All gene names: B0393.4; 3F850; CE00857; WBGene00007169; WP:CE00857
                                              
Member of lists ( lists):
                                               Bea ras L2 mixed 561,  bea RasL2 486                             
                                              genes,  mount04, R=0.41, Bea L2 mixed 709, Bea Ras L2                              
                                              time course (99%), Peter's Lev UP unc-29 DOWN                                      
                                              (anova+10), PJ 2378 IntestineMusclettest0.01, PJ 4212                              
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome III Genes, PJRPAPER-Muscle                              
                                              negative controls, PJRPAPER-Muslce (L1) negative                                   
                                              controls-2, PJRPAPER-Sperm Genes, Proteome Cell Role                               
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG III [May                              
                                              2002], rasl2, Reinke et al 2004, list of genes in                                  
                                              cluster order, rosetta, Sperm-enriched, Valerie                                    
                                              Reinke's 11927 genes                                                               

B0393.5 B0393.5 P W All gene names: B0393.5; 3F865; CE00858; WBGene00007170; WP:CE00858 WormBase description: EGF-like aspartic acid and asparagine hydroxylation sites
                                              
Member of lists ( lists):
                                               mount14, R=0.38, PJ                                              
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

B0393.6 B0393.6 P W All gene names: B0393.6; 3F870; CE33964; WBGene00007171; WP:CE33964 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              NL1832syntlet, PJ 2378 IntestineMusclettest0.01, PJ                                
                                              4212 IntestineMuscleTtest0.05, PJRPAPER-Chromosome III                             
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

B0395.2 B0395.2 P W All gene names: B0395.2; CE02943; WBGene00007174; WP:CE02943; XQ647 WormBase description: Sterol O-acyltransferase
                                              
Member of lists ( lists):
                                               mount14, R=0.38, Bea L2 mixed 709, JW                            
                                              Dauer ANOVA 2430 v4, JW Dauer Recovery Specific 1984,                              
                                              JW Late 325, Lipid metabolism genes, Peter's Dorsal                                
                                              List (02-19-01), Peter's L1 Muscle Genes (95 Con;                                  
                                              02-01-01), Peter's L1-Dorsal+Excr avg (99.9), PJ No8                               
                                              First 1500, PJRPAPER-Chromosome X Genes,                                           
                                              PJRPAPER-Lipid, fatty-acid and sterol metabolism,                                  
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Lipid, Sterol & Fat, Proteome Funct                               
                                              Class (Mar 2000)-Transferase, Proteome LG X [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

B0403.4 B0403.4 P W All gene names: tag-320; B0403.4; CE03880; WBGene00015168; WP:CE03880; XH686 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: protein disulfide-isomerase
                                              
Member of lists ( lists):
                                               mount05, R=0.22, JW Common Kinetics                              
                                              446 v3, JW Dauer ANOVA 2430 v4, PJ 3085 intestinal                                 
                                              genes, PJ 3118 intestinal genes, PJ 4746 intestinal                                
                                              gene Con95, PJ No 2 first 1500, PJRPAPER-Cell Stress                               
                                              (not HSP/Chap/MDR), PJRPAPER-Chromosome X Genes,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG X [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0412.2 B0412.2 P W All gene names: daf-7; B0412.2; 3B431; CE01758; NM_064864; WBGene00000903; WP:CE01758 WormBase description: daf-7 encodes a member of the transforming growth factor beta superfamily that affects dauer larvae formation in a TGF-beta-mediated pathway and also affects egg laying; expressed in the ASI neurons. WormBase CDS description: transforming growth factor beta proteins
                                              
Member of lists ( lists):
                                               mount01, R=0.15, Chemosensation,                                 
                                              Dauer, PJRPAPER-Chromosome III Genes,                                              
                                              PJRPAPER-Extracellular (not cell wall or collagen),                                
                                              PJRPAPER-RTKs, PJRPAPER-Tyrosine Kinase, Proteome Cell                             
                                              Role (Oct 2000)- Signal Transduction, Proteome Funct                               
                                              Class (Mar 2000)-Ligand, Proteome LG III [May 2002],                               
                                              Proteome Localization (Oct 2000)-Extracellular (ex,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, tgf-beta signaling, Valerie Reinke's 11927                                
                                              genes                                                                              

B0414.3 B0414.3 P W All gene names: hil-5; B0414.3; 1G351; CE07733; NM_059277; WBGene00001856; WP:CE07733 WormBase description: histone H1
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer13,                                
                                              Germ line-enriched, Histone genes, PJ 3085 intestinal                              
                                              genes, PJ 3118 intestinal genes, PJ 4746 intestinal                                
                                              gene Con95, PJ No4 first1500, PJ No5 first 1500, PJ                                
                                              No10-1-R15 First 1500, PJ No10-1-R16 First 1500,                                   
                                              PJRPAPER-Chromatin/Chromosome Structure,                                           
                                              PJRPAPER-Chromosome I Genes, Proteome Cell Role (Oct                               
                                              2000)- Chromatin/Chromosom, Proteome Funct Class (Mar                              
                                              2000)-DNA-binding Domain, Proteome LG I [May 2002],                                
                                              Proteome Localization (Oct 2000)-Nuclear, Reinke et al                             
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

B0414.4 B0414.4 P W All gene names: B0414.4; WBGene00043087
                                              
Member of lists ( lists):
                                              Proteome LG I [May 2002], Reinke et al                            
                                              2004, list of genes in cluster order                                               

B0414.5 B0414.5 P W All gene names: cpb-3; B0414.5; 1G366; CE07735; NM_059279; WBGene00000772; WP:CE07735 WormBase description: The cbp-3 gene encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog. WormBase CDS description: RNA binding protein
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Germ line-enriched,                             
                                              JW Dauer Enriched by AdjDT0 vs L1T0, PJ No5 first 1500,                            
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG I [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, RNA                                    
                                              binding, rosetta, Valerie Reinke's 11927 genes                                     

B0414.6 B0414.6 P W All gene names: glh-3; B0414.6; 1G370; CE07736; NM_059280; WBGene00001600; WP:CE07736 WormBase description: glh-3 encodes a predicted DEAD-like RNA helicase; GLH-3 interacts with itself and with CSN-5, KGB-1, ZYX-1, and GLH-1 in vitro, and is expressed in association with P granules throughout development. WormBase CDS description: RNA helicase
                                              
Member of lists ( lists):
                                               mount07, R=0.43, PJRPAPER-Chromosome                             
                                              I Genes, PJRPAPER-Muslce (L1) negative controls-2,                                 
                                              PJRPAPER-Protein Production (not ribo/chap),                                       
                                              PJRPAPER-RNA Processing, Protein expression, Proteome                              
                                              Cell Role (Oct 2000)- RNA Processing/Modi, Proteome                                
                                              Cell Role (Oct 2000)- Protein Synthesis, Proteome Funct                            
                                              Class (Mar 2000)-Helicase, Proteome LG I [May 2002],                               
                                              Proteome Localization (Oct 2000)-Cytoplasmic, Reinke et                            
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              Valerie Reinke's 11927 genes, wmyst, YK genes 95%                                  
                                              different in muscle and intestin                                                   

B0414.8 B0414.8 P W All gene names: B0414.8; 1G380; CE30413; CE36910; WBGene00015176; WP:CE30413; WP:CE36910
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount11, R=0.38,                                 
                                              stuart layer13, Art-1-7, PJ 4212                                                   
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome I Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0416.1 B0416.1 P W All gene names: B0416.1; CE19663; WBGene00015177; WP:CE19663; XJ927
                                              
Member of lists ( lists):
                                               mount01, R=0.15, GD-Chol UP, GD-Lev                              
                                              Muscle Genes, GD-Lev-Sp (wrt U29 95), GD-Lev-Sp (wrt wt                            
                                              95), Peter's Acetyl-P001 Superset, Peter's Lev UP                                  
                                              unc-29 DOWN (anova+10), PJ No 2 first 1500,                                        
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome X Genes,                             
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-xLEV-specific (wrtWT), PJRPAPER-zLev-Genes,                               
                                              PJRPAPER-zU29WLev up, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG X [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

B0416.4 B0416.4 P W All gene names: B0416.4; CE02434; WBGene00015180; WP:CE02434; XJ899
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7,                                        
                                              Oocyte-enriched, PJRPAPER-Chromosome X Genes,                                      
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Oocyte Genes, Proteome Cell Role (Oct 2000)-                              
                                              Genes of Unknown Ce, Proteome LG X [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

B0416.7 B0416.7 P W All gene names: B0416.7; CE02437; CE39552; WBGene00015182; WP:CE02437; WP:CE39552; XJ914
                                              
Member of lists ( lists):
                                               mount15, R=0.37, PJ No 2 first 1500,                             
                                              PJRPAPER-Chromosome X Genes, PJRPAPER-L1 Muscle Genes                              
                                              (95), Proteome Cell Role (Oct 2000)- Genes of Unknown                              
                                              Ce, Proteome LG X [May 2002], Reinke et al 2004, list                              
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes                                                                        

B0432.10 B0432.10 P W All gene names: B0432.10; 2A574; CE07748; WBGene00015191; WP:CE07748
                                              
Member of lists ( lists):
                                               mount07, R=0.43, daf-16 p<.001, 7-01,                            
                                              daf-16 (p < .001), operon first genes,                                             
                                              PJRPAPER-Chromosome II Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG II [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

B0432.8 B0432.8 P W All gene names: B0432.8; 2A562; CE34637; WBGene00015189; WP:CE34637 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Proteome Cell Role                              
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG II [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order                                                                              

B0454.6 B0454.6 P W All gene names: B0454.6; 2D325; CE07756; WBGene00015197; WP:CE07756 WormBase description: amino acid permease
                                              
Member of lists ( lists):
                                               mount06, R=0.21, Proteome Cell Role                              
                                              (Oct 2000)- Small Molecule Tran, Proteome Funct Class                              
                                              (Mar 2000)-Active Transporter, Proteome Funct Class                                
                                              (Mar 2000)-Transporter, Proteome LG II [May 2002],                                 
                                              Proteome Localization (Oct 2000)-Unspecified membr,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

B0457.1 B0457.1 P W All gene names: lat-1; B0457.1; 2J197; CE02945; CE32789; CE36086; NM_063493; NM_182149; WBGene00002251; WP:CE02945; WP:CE32789; WP:CE36086 WormBase description: lat-1 encodes a predicted latrophilin that affects embryonic elongation, pharyngeal development, and reproductive organ formation; apically localized in developing epithelia and localized to presynaptic surfaces in neurons.
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  mount07, R=0.43, Bea lectin, L2 Hs genes                              
                                              99.9, PJRPAPER-Chromosome II Genes, Proteome Cell Role                             
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG II [May                               
                                              2002], Proteome Localization (Oct 2000)-Unspecified                                
                                              membr, Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

B0457.3 B0457.3 P W All gene names: B0457.3; 2J198; WBGene00014660
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount04, R=0.41, PJ                              
                                              4212 IntestineMuscleTtest0.05, PJ No 2 first 1500,                                 
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Muscle negative                             
                                              controls, PJRPAPER-Muslce (L1) negative controls-2,                                
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG II [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

B0462.3 B0462.3 P W All gene names: fbxb-119; B0462.3; 5S797; CE15556; WBGene00007182; WP:CE15556
                                              
Member of lists ( lists):
                                               mount12, R=0.29, daf-16 min,                                     
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG V [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin                                                                

B0464.2 B0464.2 P W All gene names: B0464.2; 3K585; CE20456; WBGene00007184; WP:CE20456 WormBase description: TPR Domain
                                              
Member of lists ( lists):
                                               mount05, R=0.22,  stuart layer11,                                
                                              GD-Chol NSD/AMB, GD-GABA Down (Anova/TTest), GD-Lev                                
                                              Muscle Genes, GD-U25 muscle, Germ line-enriched, josh                              
                                              laura2 4/8 common, Peter's Acetyl-P001 Superset,                                   
                                              Peter's Neuro (95; 06-18-01), Peter's Neuro (99;                                   
                                              06-18-01), Peter's Neuro (99.9; 06-18-01), PJ                                      
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No4 first1500, PJ No5 first 1500, PJ                                     
                                              No10-1-R16 First 1500, PJ No10-1-R15 First 1500,                                   
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev nsd,                                 
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0464.6 B0464.6 P W All gene names: B0464.6; B0464.6.1; B0464.6.2; B0464.6.3; 3K554; CE33965; WBGene00007186; WP:CE33965
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount11, R=0.38,                                 
                                              stuart layer9, josh laura2 4/8 common, Oocyte-enriched,                            
                                              PJ 4212 IntestineMuscleTtest0.05, PJ No 2 first 1500,                              
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-Oocyte Genes,                              
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0464.8 B0464.8 P W All gene names: tag-342; B0464.8; 3K559; CE36465; WBGene00007187; WP:CE36465
                                              
Member of lists ( lists):
                                               mount02, R=0.15, daf-16 p<.001, 7-01,                            
                                              GD-Chol Down, GD-U29-Sp (wrt Lev 95), GD-U29 muscle                                
                                              genes, Peter's Acetyl-P001 Superset, Peter's Neuro (95;                            
                                              06-18-01), Peter's Neuro (99; 06-18-01), Peter's Neuro                             
                                              (99.9; 06-18-01), PJ 3085 intestinal genes, PJ 3118                                
                                              intestinal genes, PJ 4746 intestinal gene Con95, PJ                                
                                              No10-1-R15 First 1500, PJ No10-1-R16 First 1500,                                   
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes,                                 
                                              Reinke et al 2004, list of genes in cluster order                                  

B0464.9 B0464.9 P W All gene names: B0464.9; 3K555; CE26705; WBGene00007188; WP:CE26705
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer9, josh                            
                                              laura2 4/8 common, PJ 3085 intestinal genes, PJ 3118                               
                                              intestinal genes, PJ 4746 intestinal gene Con95, PJ No                             
                                              2 first 1500, PJRPAPER-Chromosome III Genes, Reinke et                             
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              Valerie Reinke's 11927 genes                                                       

B0491.1 B0491.1 P W All gene names: B0491.1; 2L639; CE02103; WBGene00007189; WP:CE02103
                                              
Member of lists ( lists):
                                               mount07, R=0.43, daf-16 p<.001, 7-01,                            
                                              daf-16 (p < .001), operon first genes, PJ 2378                                     
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome II Genes,                            
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG II [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, wmyst, YK genes 95% different in muscle and                                 
                                              intestin                                                                           

B0491.2 B0491.2 P W All gene names: rol-5; sqt-1; B0491.2; B0491.2.1; B0491.2.2; 2L626; CE02104; NM_064020; Rol; WBGene00005016; WP:CE02104 WormBase description: sqt-1 encodes a cuticle collagen; during larval and adult development, sqt-1 activity is required, likely redundantly, for normal cuticle, and hence organismal, morphology; sqt-1 mRNA abundance oscillates during larval development, peaking at one point during each larval stage and peaking again in adults; sqt-1 transcripts are also detected in animals at the L1-L2d molt; in the temporally distinct waves of collagen gene expression that occur during larval development, sqt-1 mRNA appears to be synthesized during the second, or intermediate, stage, just very slightly earlier than sqt-3/col-1 and dpy-13; SQT-1 protein is detected in cuticle extracts from L2, L3, and L4 larvae, and from adults, but is not detected in extracts from L1 or dauer larvae; sqt-1 interacts genetically with a number of genes also required for normal cuticle and organismal morphology, e.g., rol-6 and lon-3, which also encode cuticular collagens. WormBase CDS description: cuticle collagen SQT-1
                                              
Member of lists ( lists):
                                               mount16, R=0.40, Cell Adhesion genes,                            
                                              Collagen, GD-Chol UP, GD-GABA NSD/AMB (Anova/TTest),                               
                                              GD-L1 Muscle Genes, GD-L1-Sp (wrt U29 95), GD-L2 Muscle                            
                                              Genes, GDPAPER-Prelim Mixed Muscle, JW 1703 merged                                 
                                              Peters zMuscle 8-02, JW Dauer ANOVA 2430 v4, JW Dauer                              
                                              Recovery Specific 1984, JW Late 325, Neuro-1 L1 Upreg                              
                                              (11 20 00), Peter's Acetyl-P001 Superset, Peter's All                              
                                              Muscle Genes (1 16 01), Peter's Dorsal List (02-19-01),                            
                                              Peter's L1-Dorsal+Excr avg (99.9), Peter's L1 Muscle                               
                                              Genes (95 Con; 02-01-01), Peter's L2 Muscle (95 Con;                               
                                              02-01-01), Peter's Lev UP unc-29 DOWN (anova+10),                                  
                                              Peter's Superset of L1-L2 Genes (considering 99.9, PJ                              
                                              836 muscle and intestine in common, PJ 1005I0.05M0.001,                            
                                              PJ 1445 M0.05I0.001, PJ 1617  Muscle and intestine in                              
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No4 first1500, PJ No5 first                              
                                              1500, PJ No8 First 1500, PJ No10-1-R16 First 1500, PJ                              
                                              No10-1-R15 First 1500, PJ No 2 first 1500,                                         
                                              PJRGDPAPER-Collagens (All), PJRGDPAPER-Collagens                                   
                                              (Non-BM), PJRGDPAPER-Collagens (unspecified),                                      
                                              PJRPAPER-1329 L1 Muscle Genes (Chromo II),                                         
                                              PJRPAPER-1329 L1 Muscle List (genes within 10,                                     
                                              PJRPAPER-Cell Adhesion, PJRPAPER-Cholin Superset,                                  
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-CLustered muscle                            
                                              genes (12 16 01), PJRPAPER-Collagens, PJRPAPER-Cuticle                             
                                              Collagens, PJRPAPER-Cuticle Collagens Grp1, PJRPAPER-L1                            
                                              Muscle Genes (95), PJRPAPER-L1 Muscle Genes (1364),                                
                                              PJRPAPER-xWT-specific (wrtU29), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                             
                                              PJRPAPER-zU29WLev up, PJRPAPERz-L1 Cluster (10 kb; no                              
                                              para or ops), PJRPAPERz-L1 Clustered(without Paralogues                            
                                              wit, PJRPAPERz-L2 Clustered (inc Operons not Paral,                                
                                              PJRPAPERz-L2 Clustered(without Paralogues wit, Proteome                            
                                              Funct Class (Mar 2000)-Structural Protein, Proteome LG                             
                                              II [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Valerie Reinke's 11927 genes                               

B0491.3 B0491.3 P W All gene names: B0491.3; 2L628; CE02105; WBGene00007190; WP:CE02105
                                              
Member of lists ( lists):
                                              400 N2 hs min (egg), 1003 N2 hs min                               
                                              (egg + L2),  mount04, R=0.41, aging p < .001 (May                                  
                                              2001), Aging p < .01, Aging, p<.001 aging subset,                                  
                                              Aging.p01, Aging.p001, Eggs HS genes 99.9%,                                        
                                              Male-enriched, PJ 2378 IntestineMusclettest0.01, PJ                                
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Chromosome II Genes, PJRPAPER-Muslce                               
                                              (L1) negative controls-2, Proteome Cell Role (Oct                                  
                                              2000)- Genes of Unknown Ce, Proteome LG II [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, YK genes 95% different in muscle and intestin                             

B0491.4 B0491.4 P W All gene names: B0491.4; 2L630; CE02106; WBGene00007191; WP:CE02106
                                              
Member of lists ( lists):
                                               mount00, R=0.11, PJRPAPER-Chromosome                             
                                              II Genes, Proteome Cell Role (Oct 2000)- Genes of                                  
                                              Unknown Ce, Proteome LG II [May 2002], Reinke et al                                
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, YK genes 95% different in muscle                             
                                              and intestin                                                                       

B0491.6 B0491.6 P W All gene names: B0491.6; B0491.6.1; B0491.6.2; 2L636; CE02108; WBGene00007193; WP:CE02108
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  mount11, R=0.38, Aging.p01, Aging.p001,                               
                                              daf-16 p<.001, 7-01, daf-16 (p < .001), L2 Hs genes                                
                                              99.9, PJ 1158IntestineMuscleTTEST0.001, PJ 2378                                    
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No10-1-R16 First 1500, PJRPAPER-Chromosome II                            
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG II [May 2002], Reinke et al 2004, list                             
                                              of genes in cluster order, rosetta, YK genes 95%                                   
                                              different in muscle and intestin                                                   

B0495.10 B0495.10 P W All gene names: tag-178; B0495.10; 2I2; CE01760; CE32105; CE33266; WBGene00007044; WBGene00015209; WP:CE01760; WP:CE32105; WP:CE33266
                                              
Member of lists ( lists):
                                               mount01, R=0.15, daf-2 1384 min,                                 
                                              daf-2 1384 InAgingSetMin3ClusterA, JW Common Kinetics                              
                                              446 v3, JW Dauer ANOVA 2430 v4, PJRPAPER-Chromosome II                             
                                              Genes, PJRPAPER-Muscle negative controls, Proteome Cell                            
                                              Role (Oct 2000)- Membrane Fusion, Proteome Cell Role                               
                                              (Oct 2000)- Vesicular Transport, Proteome Funct Class                              
                                              (Mar 2000)-Small Molecule Bin, Proteome LG II [May                                 
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

B0495.4 B0495.4 P W All gene names: nhx-2; B0495.4; 2H982; CE29549; NM_063213; WBGene00003730; WP:CE29549 WormBase description: nhx-2 encodes a sodium/proton exchanger expressed in the apical membranes of intestinal cells; NHX-2 is required for normally high growth rates, and for propagation or maintenance of the germline, NHX-2 is thought to prevent intracellular acidification by catalysing the electroneutral exchange of extracellular sodium for an intracellular proton. WormBase CDS description: NA(+)/H(+) exchanger
                                              
Member of lists ( lists):
                                               mount24, R=0.37, Bea L2 mixed 709,                               
                                              daf-16 p<.001, 7-01, FP 1938 Intestine genes, JW Dauer                             
                                              ANOVA 2430 v4, JW Dauer Recovery Specific 1984, JW                                 
                                              Early 538, PJ 2378 IntestineMusclettest0.01, PJ 4212                               
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome II Genes,                            
                                              Proteome Cell Role (Oct 2000)- Small Molecule Tran,                                
                                              Proteome Funct Class (Mar 2000)-Active Transporter,                                
                                              Proteome Funct Class (Mar 2000)-Transporter, Proteome                              
                                              LG II [May 2002], Proteome Localization (Oct                                       
                                              2000)-Unspecified membr, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK intestinal genes (p<.001), YK Similar muscle                             
                                              and intestine genes                                                                

B0496.1 B0496.1 P W All gene names: B0496.1; 4I209; CE06713; WBGene00015210; WP:CE06713
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Bea L2 mixed 709, PJ                            
                                              No10-1-R16 First 1500, PJRPAPER-Chromosome IV Genes,                               
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0496.2 B0496.2 P W All gene names: B0496.2; 4I215; CE06714; WBGene00015211; WP:CE06714
                                              
Member of lists ( lists):
                                               mount09, R=0.16, FP 1938 Intestine                               
                                              genes, GDPAPER-Prelim Mixed Muscle, Peter's All Muscle                             
                                              Genes (1 16 01), Peter's Neuro (95; 06-18-01), Peter's                             
                                              Neuro (99; 06-18-01), Peter's Neuro (99.9; 06-18-01),                              
                                              Peter's Neuro-non-musc(sp&enri;fr99.9 Superset),                                   
                                              Peter's UP-Reg Muscle (10 25 00), PJ 2378                                          
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome IV Genes,                            
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK intestinal genes (p<.001), YK Similar muscle                             
                                              and intestine genes                                                                

B0511.1 B0511.1 P W All gene names: fkb-7; B0511.1; 1L245; CE26851; NM_060391; WBGene00001432; WP:CE26851 WormBase description: fkb-7 encodes a peptidylprolyl cis/trans isomerase homologous to mammalian FK506-binding proteins; by homology, FKB-7 could function in a number of different processes including protein folding, signal transduction, and regulation of muscle contraction; however, as loss of fkb-7 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of FKB-7 in C. elegans development and/or behavior is not yet known.
                                              
Member of lists ( lists):
                                               mount06, R=0.21, Proteome Cell Role                              
                                              (Oct 2000)- Genes of Unknown Ce, Proteome Funct Class                              
                                              (Mar 2000)-Isomerase, Proteome LG I [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order                                         

B0511.12 B0511.12 P W All gene names: B0511.12; 1L232; CE28877; WBGene00015237; WP:CE28877
                                              
Member of lists ( lists):
                                               mount05, R=0.22, PJ 4212                                         
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome I Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Proteome Localization (Oct                               
                                              2000)-Unspecified membr, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

B0511.3 B0511.3 P W All gene names: fbxa-125; B0511.3; 1L225; CE17342; WBGene00015229; WP:CE17342 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount04, R=0.41,                                 
                                              age1-216daf2-1384All In age1daf2 modif 703 mi, daf-2                               
                                              1384 InAgingSetMin3ClusterB, daf-2 1384 min, PJ No8                                
                                              First 1500, PJRPAPER-Chromosome I Genes, PJRPAPER-L1                               
                                              Muscle Genes (95), PJRPAPER-Muscle negative controls,                              
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG I [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

B0511.4 B0511.4 P W All gene names: tag-344; B0511.4; 1L223; CE17343; WBGene00015230; WP:CE17343 WormBase description: protein kinase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, age-1 daf-2 comm 999                                     
                                              InAge1daf2ClusterBD 133., daf-2 1384 min, daf-2 1384                               
                                              InAgingSetMin3ClusterA, Male-enriched, PJ 4212                                     
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome I Genes,                             
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Serine/Threonine Kinases, PJRPAPER-Sperm                                  
                                              Genes, Protein kinases, Proteome Cell Role (Oct 2000)-                             
                                              Protein Modificatio, Proteome Cell Role (Oct 2000)-                                
                                              Signal Transduction, Proteome Funct Class (Mar                                     
                                              2000)-Transferase, Proteome Funct Class (Mar                                       
                                              2000)-Protein Kinase, Proteome LG I [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

B0511.5 B0511.5 P W All gene names: B0511.5; 1L205; CE17344; WBGene00015231; WP:CE17344
                                              
Member of lists ( lists):
                                               mount21, R=0.30, JW AdjD T0 vs L1 T0                             
                                              short 254, JW Dauer ANOVA 2430 v4, JW Dauer Enriched by                            
                                              AdjDT0 vs L1T0, JW Dauer Recovery Specific 1984, JW                                
                                              Transient 195, Peter's Neuro (95; 06-18-01),                                       
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG I [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

B0511.7 B0511.7 P W All gene names: B0511.7; 1L208; CE34246; WBGene00015233; WP:CE34246
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount02, R=0.15,                                 
                                              stuart layer13, Art-1-7, Oocyte-enriched,                                          
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-Oocyte Genes,                                
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0513.4 B0513.4 P W All gene names: B0513.4; 4O645; CE15560; WBGene00007196; WP:CE15560
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount22, R=0.58,                                 
                                              Aging p < .01, GDPAPER-Prelim Mixed Muscle, josh                                   
                                              laura1/2 common, Peter's All Muscle Genes (1 16 01),                               
                                              Peter's L1 Muscle Genes (95 Con; 02-01-01), Peter's                                
                                              UP-Reg Muscle (10 25 00), PJ 1445 M0.05I0.001, PJ 1617                             
                                              Muscle and intestine in common, PJ 1899                                            
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome IV Genes, PJRPAPER-Muslce                               
                                              (L1) negative controls-2, Proteome Cell Role (Oct                                  
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

B0513.5 B0513.5 P W All gene names: B0513.5; 4O634; CE37309; WBGene00007197; WP:CE37309
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount16, R=0.40, JW                              
                                              Climbing 386, JW Dauer ANOVA 2430 v4, JW Dauer Recovery                            
                                              Specific 1984, Male-enriched, PJ                                                   
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-Oxidoreductase, Proteome Cell Role (Oct 2000)-                            
                                              Genes of Unknown Ce, Proteome Funct Class (Mar                                     
                                              2000)-Oxidoreductases, Proteome LG IV [May 2002],                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

B0513.7 B0513.7 P W All gene names: B0513.7; 4O598; WBGene00007199
                                              
Member of lists ( lists):
                                              400 N2 hs min (egg), 1003 N2 hs min                               
                                              (egg + L2),  mount25, R=0.44, Eggs HS genes 99.9%, JW                              
                                              Dauer Enriched AdjT0 vs AdjT12, Proteome Cell Role (Oct                            
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

B0523.3 B0523.3 P W All gene names: pgl-2; B0523.3; 3J758; CE20462; NM_066510; WBGene00003993; WP:CE20462
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Aging p < .01,                                  
                                              GD-Chol "\/", GD-U29-Sp (wrt Lev 95), GD-U29 muscle                                
                                              genes, GD-U29-Sp (wrt L1 95), Germ line-enriched,                                  
                                              Hermaphrodite-enriched, josh laura1/2 common, Peter's                              
                                              Acetyl-P001 Superset, PJRPAPER-Cholin Superset,                                    
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-xU29-specific                              
                                              (wrtWT), PJRPAPER-zU29WLev down-up,                                                
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG III [May 2002], Ras                               
                                              spe99, Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

B0523.5 B0523.5 P W All gene names: CE-FLI-1; ach-1; fli-1; B0523.5; 3J768; CE36522; NM_066512; WBGene00001443; WP:CE36522 WormBase description: fli-1 encodes a homolog of Drosophila flightless-I; can interact with human Ha-Ras and human actin in vitro; mRNA levels are highest in embryos.
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  mount05, R=0.22,  stuart layer7, josh                                 
                                              laura2 4/8 common, L2 Hs genes 99.9, PJ No5 first 1500,                            
                                              PJRPAPER-Chromosome III Genes, Proteome Cell Role (Oct                             
                                              2000)- Genes of Unknown Ce, Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

B0546.2 B0546.2 P W All gene names: B0546.2; B0546.2.1; B0546.2.2; 4E138; CE30591; WBGene00015249; WP:CE30591
                                              
Member of lists ( lists):
                                               mount02, R=0.15, GD-Chol NSD/AMB,                                
                                              GD-U29 muscle genes, GD-U29-Sp (wrt L1 95), Peter's                                
                                              Acetyl-P001 Superset, PJRPAPER-Cholin Superset,                                    
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-xU29-specific                               
                                              (wrtWT), PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes,                               
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order                                                             

B0546.4 B0546.4 P W All gene names: B0546.4; 4E148; CE16795; CE33354; WBGene00015251; WP:CE16795; WP:CE33354
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  Bea ras L2 mixed 561,  bea RasL2 486                                  
                                              genes,  mount15, R=0.37, Bea L2 mixed 709, Bea Ras L2                              
                                              time course (99%), FP 645 Intestine specific genes, FP                             
                                              1938 Intestine genes, GD-Chol NSD/AMB, GD-GABA NSD/AMB                             
                                              (Anova/TTest), GD-Lev Muscle Genes, GD-U25 muscle,                                 
                                              GD-U29 muscle genes, JW Common Kinetics 446 v3, JW                                 
                                              Dauer ANOVA 2430 v4, JW Dauer Enriched AdjT0 vs AdjT12,                            
                                              L2 Hs genes 99.9, operon first genes, Peter's                                      
                                              Acetyl-P001 Superset, Peter's Neuro (95; 06-18-01),                                
                                              Peter's Neuro (99; 06-18-01), Peter's Neuro (99.9;                                 
                                              06-18-01), PJRPAPER-Cholin Superset,                                               
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-zLev-Genes,                                 
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              IV [May 2002], rasl2, Reinke et al 2004, list of genes                             
                                              in cluster order, rosetta, Valerie Reinke's 11927                                  
                                              genes, YK genes 95% different in muscle and intestin,                              
                                              YK intestinal genes (p<.001), YK intestine-specific                                
                                              genes                                                                              

B0564.6 B0564.6 P W All gene names: B0564.6; 4N895; CE05180; CE05182; WBGene00007206; WP:CE05180; WP:CE05182 WormBase description: Leucine Rich Repeat (2 copies) (2 domains)
                                              
Member of lists ( lists):
                                               mount06, R=0.21, JW Common Kinetics                              
                                              446 v3, JW Dauer ANOVA 2430 v4, JW SAGE Dauer all, JW                              
                                              SAGE Dauer on Array v1, PJRPAPER-Chromosome IV Genes,                              
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG IV                               
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

B0564.7 B0564.7 P W All gene names: B0564.7; B0564.7.1; B0564.7.2; 4N867; CE36971; WBGene00007207; WP:CE36971 WormBase description: Zinc finger, C3HC4 type (RING finger)
                                              
Member of lists ( lists):
                                              Proteome LG IV [May 2002], Reinke et                              
                                              al 2004, list of genes in cluster order                                            

BE10.2 BE10.2 P W All gene names: BE10.2; 3N884; CE30592; WBGene00007210; WP:CE30592
                                              
Member of lists ( lists):
                                               mount14, R=0.38, JW Dauer ANOVA 2430                             
                                              v4, JW Dauer Recovery Specific 1984, JW Late 325,                                  
                                              PJRPAPER-Chromosome III Genes, Proteome Cell Role (Oct                             
                                              2000)- Genes of Unknown Ce, Proteome LG III [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

BE10.4 BE10.4 P W All gene names: BE10.4; 3N905; CE15567; WBGene00007212; WP:CE15567
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount01, R=0.15,                                 
                                              Neuro-1 L1 Upreg (11 20 00), PJ 4746 intestinal gene                               
                                              Con95, PJRPAPER-Chromosome III Genes, Proteome Cell                                
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG III                              
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, YK genes 95% different in muscle and intestin                               

C01A2.2 C01A2.2 P W All gene names: C01A2.2; 1N989; CE07784; WBGene00007214; WP:CE07784
                                              
Member of lists ( lists):
                                               mount00, R=0.11, PJRPAPER-Chromosome                             
                                              I Genes, PJRPAPER-Muslce (L1) negative controls-2,                                 
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, sir2.1--ok434all 558 min,                                  
                                              sir2.1-- 297 min                                                                   

C01A2.4 C01A2.4 P W All gene names: C01A2.4; 1N983; CE34247; WBGene00007216; WP:CE34247
                                              
Member of lists ( lists):
                                              204 diff min, 684 N2 hs min (L2), 1003                            
                                              N2 hs min (egg + L2),  bea RasL2 486 genes,  mount02,                              
                                              R=0.15, Aging.p01, Aging.p001, GD-Chol NSD/AMB, GD-GABA                            
                                              NSD/AMB (Anova/TTest), GD-U25 muscle, GD-U29-Sp (wrt                               
                                              Lev 95), GD-U29 muscle genes, L2 Hs genes 99.9, Peter's                            
                                              Acetyl-P001 Superset, Peter's L2 Muscle (95 Con;                                   
                                              02-01-01), PJ 1235 intestine-sepcific, PJ 3085                                     
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4212                                
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No5 first 1500, PJ No10-1-R16 First 1500,                                
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome I Genes,                             
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              I [May 2002], Reinke et al 2004, list of genes in                                  
                                              cluster order, rosetta, Valerie Reinke's 11927 genes                               

C01B10.10 C01B10.10 P W All gene names: C01B10.10; 4H390; CE37180; WBGene00015284; WP:CE37180
                                              
Member of lists ( lists):
                                               mount08, R=0.21, GD-Chol "\/", GD-U29                            
                                              muscle genes, GD-U29-Sp (wrt L1 95), Peter's                                       
                                              Acetyl-P001 Superset, PJRPAPER-Cholin Superset,                                    
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-xU29-specific                               
                                              (wrtWT), PJRPAPER-zU29WLev down-up,                                                
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome Funct Class (Mar                                     
                                              2000)-Hydrolase, Proteome LG IV [May 2002], Proteome                               
                                              Localization (Oct 2000)-Cytoplasmic, Reinke et al 2004,                            
                                              list of genes in cluster order, rosetta, Valerie                                   
                                              Reinke's 11927 genes                                                               

C01B10.3 C01B10.3 P W All gene names: C01B10.3; 4H384; CE33355; WBGene00015278; WP:CE33355
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount19, R=0.29,                                 
                                              daf-2 1384 min, daf-2 1384 InAgingSetMin3ClusterA, JW                              
                                              Dauer ANOVA 2430 v4, JW Dauer Recovery Specific 1984,                              
                                              JW Early 538, PJRPAPER-Chromosome IV Genes, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              IV [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Valerie Reinke's 11927 genes                               

C01B10.4 C01B10.4 P W All gene names: C01B10.4; 4H396; CE34641; WBGene00015279; WP:CE34641
                                              
Member of lists ( lists):
                                               mount03, R=0.13, PJRPAPER-Chromosome                             
                                              IV Genes, PJRPAPER-Muslce (L1) negative controls-2,                                
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome Funct Class (Mar 2000)-Hydrolase, Proteome LG                             
                                              IV [May 2002], Proteome Localization (Oct                                          
                                              2000)-Cytoplasmic, Reinke et al 2004, list of genes in                             
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              YK genes 95% different in muscle and intestin                                      

C01B10.8 C01B10.8 P W All gene names: C01B10.8; C01B10.8.1; C01B10.8.2; 4H401; CE06739; WBGene00015282; WP:CE06739
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  Bea ras L2 mixed 561,  bea RasL2 486                                  
                                              genes,  mount02, R=0.15, JW Common Kinetics 446 v3, JW                             
                                              Dauer ANOVA 2430 v4, L2 Hs genes 99.9,                                             
                                              PJRPAPER-Chromosome IV Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C01B10.9 C01B10.9 P W All gene names: C01B10.9; 4H399; CE37181; WBGene00015283; WP:CE37181
                                              
Member of lists ( lists):
                                               mount07, R=0.43, operon first genes,                             
                                              PJRPAPER-Chromosome IV Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C01B12.1 C01B12.1 P W All gene names: sqt-2; C01B12.1; 2A315; CE07789; NM_061234; WBGene00005017; WP:CE07789 WormBase description: Uncloned locus that affects alae formation and body morphology such that mutants exhibit a slightly dumpy phenotype and the bodies of mutants are helically twisted. WormBase CDS description: cuticular collagen
                                              
Member of lists ( lists):
                                               mount16, R=0.40, Cell Structure,                                 
                                              Collagen, JW Dauer ANOVA 2430 v4, JW Dauer Recovery                                
                                              Specific 1984, JW Late 325, JW SAGE mixed stage,                                   
                                              Peter's L1 Muscle Genes (95 Con; 02-01-01), Peter's L2                             
                                              Muscle (95 Con; 02-01-01), PJ 1235 intestine-sepcific,                             
                                              PJ 1445 M0.05I0.001, PJ 1617  Muscle and intestine in                              
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4212                                
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No4 first1500, PJ No5 first 1500, PJ No8                                 
                                              First 1500, PJ No10-1-R16 First 1500, PJ No10-1-R15                                
                                              First 1500, PJRGDPAPER-Collagens (All),                                            
                                              PJRGDPAPER-Collagens (Non-BM), PJRGDPAPER-Collagens                                
                                              (unspecified), PJRPAPER-Chromosome II Genes,                                       
                                              PJRPAPER-Collagens, PJRPAPER-Cuticle Collagens,                                    
                                              PJRPAPER-Cuticle Collogens Grp2, PJRPAPER-L1 Muscle                                
                                              Genes (95), Proteome Cell Role (Oct 2000)- Cell                                    
                                              Structure, Proteome Funct Class (Mar 2000)-Structural                              
                                              Protein, Proteome LG II [May 2002], Proteome                                       
                                              Localization (Oct 2000)-Extracellular (ex, Reinke et al                            
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

C01B12.7 C01B12.7 P W All gene names: C01B12.7; 2A316; CE07795; WBGene00015290; WP:CE07795
                                              
Member of lists ( lists):
                                               mount01, R=0.15,  stuart layer12,                                
                                              GD-Chol Down, GD-U29-Sp (wrt Lev 95), GD-U29 muscle                                
                                              genes, GD-U29-Sp (wrt L1 95), JW Dauer ANOVA 2430 v4,                              
                                              JW Dauer Recovery Specific 1984, JW Early 538, Peter's                             
                                              Acetyl-P001 Superset, Peter's Dorsal List (02-19-01),                              
                                              Peter's L1 Muscle Genes (95 Con; 02-01-01), Peter's                                
                                              L1-Dorsal+Excr avg (99.9), Peter's Neuro (95;                                      
                                              06-18-01), PJ 1445 M0.05I0.001, PJ 1617  Muscle and                                
                                              intestine in common, PJ 1899                                                       
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome II                            
                                              Genes, PJRPAPER-L1 Muscle Genes (95),                                              
                                              PJRPAPER-xU29-specific (wrtWT), PJRPAPER-zU29WLev down,                            
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG II [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta                                

C01B4.3 C01B4.3 P W All gene names: str-258; C01B4.3; 5C989; CE20472; NM_071285; WBGene00006284; WP:CE20472 WormBase description: 7TM chemoreceptor, str family
                                              
Member of lists ( lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order                                                                      

C01B7.4 C01B7.4 P W All gene names: tag-117; C01B7.4; 5J272; CE06728; WBGene00006467; WP:CE06728 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: guanylate kinase
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  Bea ras L2 mixed 561,                            
                                               bea RasL2 486 genes,  mount01, R=0.15, Bea common                                 
                                              HSlet60-let60 groupB, Bea L2 mixed 709, daf-2 1384 min,                            
                                              daf-2 1384 InAgingSetMin3ClusterA, PDZ domain genes,                               
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-PDZ-Containing                               
                                              Proteins, PJRPAPER-Serine/Threonine Kinases, Protein                               
                                              kinases, Proteome Cell Role (Oct 2000)- Protein                                    
                                              Modificatio, Proteome Cell Role (Oct 2000)- Signal                                 
                                              Transduction, Proteome Funct Class (Mar                                            
                                              2000)-Transferase, Proteome Funct Class (Mar                                       
                                              2000)-Protein Kinase, Proteome LG V [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, wmyst                                                

C01B9.1 C01B9.1 P W All gene names: C01B9.1; 2O67; CE17359; WBGene00007220; WP:CE17359
                                              
Member of lists ( lists):
                                               mount01, R=0.15, JW Common Kinetics                              
                                              446 v3, JW Dauer ANOVA 2430 v4, PJ 4212                                            
                                              IntestineMuscleTtest0.05, PJ No5 first 1500,                                       
                                              PJRPAPER-Chromosome II Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG II [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

C01C10.1 C01C10.1 P W All gene names: clc-2; C01C10.1; CE28881; WBGene00000523; WP:CE28881; XI51 WormBase description: clc-2 encodes a claudin homolog, closely similar to CLC-1, that is required for normal cohesion of apical junctions in epithelia; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water; CLC-2 maintains the impermeability ('barrier function') of epithelia, since clc-1(RNAi) animals have abnormal permeability of the hypodermis to dyes; clc-2 is expressed in hypodermal seam cells, with two diffuse lines of CLC-2 protein.
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount02, R=0.15,                                 
                                              age1-216daf2-1384All In age1daf2 modif 703 mi, daf-2                               
                                              1384 InAgingSetMin3ClusterB, daf-2 1384 min, GD-Chol                               
                                              Down, GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes,                                 
                                              GD-U29-Sp (wrt L1 95), Peter's Acetyl-P001 Superset,                               
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome X Genes,                             
                                              PJRPAPER-xU29-specific (wrtWT), PJRPAPER-zU29WLev nsd,                             
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG II [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

C01C7.1 C01C7.1 P W All gene names: ark-1; rok-1; C01C7.1; 4N388; CE26967; NM_070017; WBGene00000186; WP:CE26967 WormBase description: ark-1 encodes a homolog of the nonreceptor tyrosine kinase ACK which inhibits signalling through the EGF receptor homolog LET-23, both in (RAS-dependent) vulval development and in (RAS-independent) ovulation. WormBase CDS description: Src homology domain 3, tyrosine-protein kinase (ACK subfamily)
                                              
Member of lists ( lists):
                                               mount05, R=0.22, Bea Ras pathway,                                
                                              GD-Chol NSD/AMB, GD-L2 Muscle Genes, GD-Lev Muscle                                 
                                              Genes, GD-U29 muscle genes, GDPAPER-Prelim Mixed                                   
                                              Muscle, JW 1703 merged Peters zMuscle 8-02, Peter's                                
                                              Acetyl-P001 Superset, Peter's All Muscle Genes (1 16                               
                                              01), Peter's L1 Muscle Genes (95 Con; 02-01-01),                                   
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's Superset                             
                                              of L1-L2 Genes (considering 99.9, Peter's UP-Reg Muscle                            
                                              (10 25 00), PJ 1899 IntestineMuscleCon95incommon, PJ                               
                                              4746 intestinal gene Con95, PJ No4 first1500,                                      
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-Ras Pathway,                               
                                              PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                                    
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev nsd,                                        
                                              PJRPAPER-zU29-Genes, Protein kinases, Proteome Cell                                
                                              Role (Oct 2000)- Signal Transduction, Proteome LG IV                               
                                              [May 2002], Ras pathway, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C01F1.3 C01F1.3 P W All gene names: phi-41; C01F1.3; C01F1.3a.1; C01F1.3a.2; 2E587; CE06744; CE39553; WBGene00015298; WP:CE06744; WP:CE39553
                                              
Member of lists ( lists):
                                               mount14, R=0.38,  stuart layer12, Bea                            
                                              L2 mixed 709, Biosynthesis, Carbohydrate metabolism, JW                            
                                              Climbing 386, JW Dauer ANOVA 2430 v4, JW Dauer Recovery                            
                                              Specific 1984, Nucleotide synthesis genes, Peter's L1                              
                                              Muscle Genes (95 Con; 02-01-01), Peter's L2 Muscle (95                             
                                              Con; 02-01-01), PJRPAPER-Carbohydrate Metabolism,                                  
                                              PJRPAPER-Carbohydrate Metabolism (no mito gen,                                     
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-L1 Muscle Genes                             
                                              (95), PJRPAPER-Nucleotide Metabolism, Proteome Cell                                
                                              Role (Oct 2000)- Nucleotide Synthesi, Proteome Cell                                
                                              Role (Oct 2000)- Carbohydrate Metabo, Proteome Funct                               
                                              Class (Mar 2000)-Lyase, Proteome LG II [May 2002],                                 
                                              Proteome Localization (Oct 2000)-Cytoplasmic, Reinke et                            
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin                                                                

C01F1.5 C01F1.5 P W All gene names: C01F1.5; 2E570; CE06746; WBGene00015300; WP:CE06746
                                              
Member of lists ( lists):
                                               mount14, R=0.38, FP 464 Muscle                                   
                                              specific genes, GD-Chol UP, GD-L1 Muscle Genes,                                    
                                              GD-L1-Sp (wrt U29 95), Peter's Acetyl-P001 Superset,                               
                                              Peter's All Muscle Genes (1 16 01), Peter's L1 Muscle                              
                                              Genes (95 Con; 02-01-01), Peter's Lev UP unc-29 DOWN                               
                                              (anova+10), Peter's Musc-non-neuro(sp&enri;fr99.9                                  
                                              Superset), Peter's ventral muscle-Specific (p<0.05),                               
                                              Peter's Ventral-Specific L1 (95) list (02-28-01),                                  
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-CLustered muscle                            
                                              genes (12 16 01), PJRPAPER-L1 Muscle Genes (1364),                                 
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG II                               
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin, YK                                           
                                              muscle-specific genes                                                              

C01F1.6 C01F1.6 P W All gene names: C01F1.6; 2E574; CE39125; WBGene00015301; WP:CE39125
                                              
Member of lists ( lists):
                                               mount11, R=0.38, FP 464 Muscle                                   
                                              specific genes, GD-Chol NSD/AMB, GD-L1 Muscle Genes,                               
                                              GD-U29 muscle genes, GDPAPER-Prelim Mixed Muscle, JW                               
                                              1703 merged Peters zMuscle 8-02, Oocyte-enriched,                                  
                                              Peter's Acetyl-P001 Superset, Peter's All Muscle Genes                             
                                              (1 16 01), Peter's L1 Muscle Genes (95 Con; 02-01-01),                             
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's                                      
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, Peter's                                 
                                              UP-Reg Muscle (10 25 00), PJRPAPER-1329 L1 Muscle Genes                            
                                              (Chromo II), PJRPAPER-1329 L1 Muscle List (genes                                   
                                              without 1, PJRPAPER-Cholin Superset,                                               
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-CLustered muscle                            
                                              genes (12 16 01), PJRPAPER-L1 Muscle Genes (95),                                   
                                              PJRPAPER-L1 Muscle Genes (1364), PJRPAPER-Oocyte Genes,                            
                                              PJRPAPER-zL1 Muscle Genes, PJRPAPER-zL1vL2 nsd,                                    
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              II [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              YK genes 95% different in muscle and intestin, YK                                  
                                              muscle-specific genes                                                              

C01F6.1 C01F6.1 P W All gene names: C01F6.1; 4J865; CE02950; WBGene00007221; WP:CE02950
                                              
Member of lists ( lists):
                                               mount07, R=0.43, GD-GABA "\/"                                    
                                              (Anova/TTest), GD-U25 muscle, Peter's Neuro (95;                                   
                                              06-18-01), Peter's Neuro (99; 06-18-01),                                           
                                              PJRPAPER-Chromosome IV Genes, Proteome Cell Role (Oct                              
                                              2000)- Membrane Fusion, Proteome Cell Role (Oct 2000)-                             
                                              Vesicular Transport, Proteome Funct Class (Mar                                     
                                              2000)-Small Molecule Bin, Proteome LG IV [May 2002],                               
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C01F6.2 C01F6.2 P W All gene names: C01F6.2; CE26968; WBGene00007222; WP:CE26968
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Art-1-7, male99,                                
                                              Male-enriched, PJ 1158IntestineMuscleTTEST0.001, PJ                                
                                              2378 IntestineMusclettest0.01, PJ 4212                                             
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-Male Genes, PJRPAPER-Muslce (L1) negative                                 
                                              controls-2, PJRPAPER-Sperm Genes, Proteome Cell Role                               
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG IV [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Sperm-enriched, Valerie Reinke's 11927                             
                                              genes, YK genes 95% different in muscle and intestin                               

C01F6.3 C01F6.3 P W All gene names: ccp-31A1; cyp-31A1; C01F6.3; 4J866; NM_069185; WBGene00000374
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, josh                                   
                                              laura1/2 common, JW P450s Full, Lipid metabolism genes,                            
                                              PJ 1158IntestineMuscleTTEST0.001, PJ 2378                                          
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-Lipid, fatty-acid and sterol metabolism,                                  
                                              PJRPAPER-Oxidoreductase, PJRPAPER-P450, Proteome Cell                              
                                              Role (Oct 2000)- Lipid, Sterol & Fat, Proteome Funct                               
                                              Class (Mar 2000)-Oxidoreductases, Proteome LG IV [May                              
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

C01F6.4 C01F6.4 P W All gene names: fem-3; C01F6.4; 4J871; CE02953; NM_069186; WBGene00001413; WP:CE02953 WormBase description: fem-3 encodes a novel protein that promotes male development in all tissues. WormBase CDS description: sex-determining protein (FEM-3)
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              josh laura1/2 common, Oocyte-enriched, PJ 2378                                     
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome IV Genes, PJRPAPER-Oocyte                               
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG IV [May 2002], Reinke et al 2004, list                             
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes                                                                        

C01G10.1 C01G10.1 P W All gene names: C01G10.1; 5P583; CE07810; WBGene00007230; WP:CE07810 WormBase description: ankyrin repeat
                                              
Member of lists ( lists):
                                               mount13, R=0.10, PJRPAPER-Chromosome                             
                                              V Genes, PJRPAPER-Muscle negative controls,                                        
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG V [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

C01G10.14 C01G10.14 P W All gene names: C01G10.14; 5P586; CE07823; WBGene00007239; WP:CE07823
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Aging.p01, josh                                 
                                              laura1/2 common, male99, Male-enriched, PJ                                         
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No10-1-R15 First 1500, PJ No10-1-R16 First                               
                                              1500, PJRPAPER-Chromosome V Genes, PJRPAPER-Male Genes,                            
                                              PJRPAPER-Muscle negative controls, PJRPAPER-Muslce (L1)                            
                                              negative controls-2, PJRPAPER-Sperm Genes, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              V [May 2002], Proteome Localization (Oct                                           
                                              2000)-Unspecified membr, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Sperm-enriched,                                   
                                              Valerie Reinke's 11927 genes                                                       

C01G10.5 C01G10.5 P W All gene names: C01G10.5; 5P570; CE07814; WBGene00007232; WP:CE07814
                                              
Member of lists ( lists):
                                              PJ 4212 IntestineMuscleTtest0.05,                                 
                                              PJRPAPER-Chromosome V Genes, Proteome Cell Role (Oct                               
                                              2000)- Genes of Unknown Ce, Proteome LG V [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, sir2.1--ok434all 558 min, sir2.1-- 297 min,                               
                                              Valerie Reinke's 11927 genes                                                       

C01G10.7 C01G10.7 P W All gene names: C01G10.7; 5P567; CE07816; WBGene00007234; WP:CE07816 WormBase description: citrate lyase beta chain
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount07, R=0.43, PJ                              
                                              2378 IntestineMusclettest0.01, PJ 4212                                             
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome V Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C01G10.9 C01G10.9 P W All gene names: C01G10.9; 5P563; CE07818; WBGene00007236; WP:CE07818 WormBase description: Initiation factor 2 subunit
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount01, R=0.15, Bea                             
                                              L2 mixed 709, Bea Ras L2 time course (99%), FP 645                                 
                                              Intestine specific genes, FP 1938 Intestine genes, JW                              
                                              Dauer ANOVA 2430 v4, JW Dauer Recovery Specific 1984,                              
                                              JW Early 538, PJRPAPER-Chromosome V Genes, Proteome LG                             
                                              V [May 2002], rasl2, Reinke et al 2004, list of genes                              
                                              in cluster order, rosetta, Valerie Reinke's 11927                                  
                                              genes, wmyst, YK genes 95% different in muscle and                                 
                                              intestin, YK intestinal genes (p<.001), YK                                         
                                              intestine-specific genes                                                           

C01G12.6 C01G12.6 P W All gene names: nspb-10; C01G12.6; 2O874; CE15575; WBGene00007246; WP:CE15575
                                              
Member of lists ( lists):
                                               mount29, R=0.53, Peter's L2 Muscle                               
                                              (95 Con; 02-01-01), PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 4212 IntestineMuscleTtest0.05, PJ 4746 intestinal                               
                                              gene Con95, PJRPAPER-Chromosome II Genes,                                          
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG II                               
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, YK genes 95% different in muscle and intestin                               

C01G12.8 C01G12.8 P W All gene names: C01G12.8; 2O883; CE15577; WBGene00007248; WP:CE15577 WormBase description: sodium/potasssium transporting ATPase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, ATPases,                                        
                                              Biosynthesis, Male-enriched, PJRPAPER-Chromosome II                                
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Small Molecule Tran, Proteome Funct Class (Mar                                     
                                              2000)-Active Transporter, Proteome Funct Class (Mar                                
                                              2000)-Transporter, Proteome Funct Class (Mar                                       
                                              2000)-ATPase, Proteome Funct Class (Mar                                            
                                              2000)-Hydrolase, Proteome LG II [May 2002], Proteome                               
                                              Localization (Oct 2000)-Unspecified membr, Reinke et al                            
                                              2004, list of genes in cluster order, rosetta,                                     
                                              Sperm-enriched, Valerie Reinke's 11927 genes, wmyst, YK                            
                                              genes 95% different in muscle and intestin                                         

C01G5.2 C01G5.2 P W All gene names: tag-292; C01G5.2; 4H292; CE06748; WBGene00015304; WP:CE06748
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Germ line-enriched,                             
                                              PJ 1158IntestineMuscleTTEST0.001, PJ 1235                                          
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No4 first1500, PJ No10-1-R15 First 1500, PJ                              
                                              No10-1-R16 First 1500, PJ No 2 first 1500,                                         
                                              PJRPAPER-Chromosome IV Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C01G5.3 C01G5.3 P W All gene names: C01G5.3; 4H301; CE06749; WBGene00015305; WP:CE06749
                                              
Member of lists ( lists):
                                               mount04, R=0.41, GD-GABA "\/"                                    
                                              (Anova/TTest), GD-U25 muscle, Male-enriched, Peter's                               
                                              Neuro (95; 06-18-01), Peter's Neuro (99; 06-18-01),                                
                                              Peter's Neuro (99.9; 06-18-01), Peter's                                            
                                              Neuro-non-musc(sp&enri;fr99.9 Superset),                                           
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-Muslce (L1)                                 
                                              negative controls-2, PJRPAPER-Sperm Genes, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              IV [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Sperm-enriched, Valerie                                    
                                              Reinke's 11927 genes                                                               

C01G5.5 C01G5.5 P W All gene names: C01G5.5; 4H291; CE06751; WBGene00015307; WP:CE06751 WormBase description: aldehyde reductase
                                              
Member of lists ( lists):
                                              771-Egg-99-min, 1214-L2-99-min,                                   
                                              mount02, R=0.15, Art-1-7, daf-16 p<.001, 7-01, FP 1938                             
                                              Intestine genes, GD-Chol "\/", GD-U29 muscle genes,                                
                                              GD-U29-Sp (wrt L1 95), Hermaphrodite-enriched,                                     
                                              Oocyte-enriched, Peter's Acetyl-P001 Superset, PJ                                  
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome IV                            
                                              Genes, PJRPAPER-Oocyte Genes, PJRPAPER-Oxidoreductase,                             
                                              PJRPAPER-xU29-specific (wrtWT), PJRPAPER-zU29WLev                                  
                                              down-up, PJRPAPER-zU29-Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome Funct Class (Mar                              
                                              2000)-Oxidoreductases, Proteome LG IV [May 2002],                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, wmyst, YK                                   
                                              intestinal genes (p<.001), YK Similar muscle and                                   
                                              intestine genes                                                                    

C01G5.6 C01G5.6 P W All gene names: C01G5.6; 4H289; CE23513; WBGene00015308; WP:CE23513
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount11, R=0.38, JW                              
                                              AdjD T0 vs L1 T0 short 254, JW AdjD T0 vs AdjD T12                                 
                                              short 406, JW Dauer ANOVA 2430 v4, JW Dauer Enriched                               
                                              AdjT0 vs AdjT12, JW Dauer Enriched by AdjDT0 vs L1T0,                              
                                              JW Dauer Recovery Specific 1984, JW Down 540, JW Down                              
                                              Late 162, operon first genes, PJ                                                   
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Chromosome IV Genes, Proteome Cell Role                            
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG IV [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

C01G5.8 C01G5.8 P W All gene names: C01G5.8; 4H315; CE07800; WBGene00015310; WP:CE07800
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, Germ                                   
                                              line-enriched, Peter's Neuro (95; 06-18-01),                                       
                                              PJRPAPER-Chromosome IV Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C01G6.2 C01G6.2 P W All gene names: C01G6.2; 2J557; CE02958; WBGene00007224; WP:CE02958
                                              
Member of lists ( lists):
                                               mount04, R=0.41, male99,                                         
                                              Male-enriched, PJ 1235 intestine-sepcific, PJ 3085                                 
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4212                                
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No10-1-R16 First 1500, PJ No 2 first 1500,                               
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Male Genes,                                 
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG II [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

C01G6.3 C01G6.3 P W All gene names: C01G6.3; 2J561; CE37474; WBGene00007225; WP:CE37474
                                              
Member of lists ( lists):
                                               mount12, R=0.29, PJ No 2 first 1500,                             
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Muslce (L1)                                 
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG II [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

C01G6.5 C01G6.5 P W All gene names: C01G6.5; 2J566; CE00867; WBGene00007227; WP:CE00867 WormBase description: Forkhead-associated (FHA) domain
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount05, R=0.22,                                 
                                              stuart layer7, Oocyte-enriched, PJRPAPER-Chromosome II                             
                                              Genes, PJRPAPER-Oocyte Genes, PJRPAPER-Transcription                               
                                              factors (good list), Proteome Cell Role (Oct 2000)- Pol                            
                                              II Transcriptio, Proteome Funct Class (Mar                                         
                                              2000)-Transcription Fact, Proteome Funct Class (Mar                                
                                              2000)-DNA-binding Domain, Proteome LG II [May 2002],                               
                                              Proteome Localization (Oct 2000)-Nuclear, Reinke et al                             
                                              2004, list of genes in cluster order, RNA pol II                                   
                                              transcription, rosetta, Valerie Reinke's 11927 genes,                              
                                              YK genes 95% different in muscle and intestin                                      

C01G6.7 C01G6.7 P W All gene names: C01G6.7; 2J583; CE00869; WBGene00007228; WP:CE00869 WormBase description: 4-coumarate-coA ligase
                                              
Member of lists ( lists):
                                               mount01, R=0.15, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, age-1 daf-2 comm 999                                     
                                              InAge1daf2ClusterBD 133., Aging p < .01, Biosynthesis,                             
                                              cluster 227 min, daf-2 1384 min, daf-2 1384                                        
                                              InAgingSetMin3ClusterB, Energy generation genes, FP                                
                                              1938 Intestine genes, JW AdjD T0 vs AdjD T12 short 406,                            
                                              JW Dauer ANOVA 2430 v4, JW Dauer Enriched AdjT0 vs                                 
                                              AdjT12, JW Dauer Recovery Specific 1984, JW Down 540,                              
                                              JW Down Late 162, PJ 1158IntestineMuscleTTEST0.001, PJ                             
                                              2378 IntestineMusclettest0.01, PJ 4212                                             
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No4 first1500, PJRPAPER-Chromosome II Genes,                             
                                              PJRPAPER-Energy Generation, Proteome Cell Role (Oct                                
                                              2000)- Energy Generation, Proteome Funct Class (Mar                                
                                              2000)-Ligase, Proteome LG II [May 2002], Reinke et al                              
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, wmyst, YK intestinal genes                                   
                                              (p<.001), YK Similar muscle and intestine genes                                    

C01G6.9 C01G6.9 P W All gene names: C01G6.9; 2J584; CE00871; WBGene00007229; WP:CE00871
                                              
Member of lists ( lists):
                                               mount12, R=0.29, Aging p<.001, daf-2                             
                                              1384 min, daf-2 1384 InAgingSetMin3ClusterA, Peter's                               
                                              Neuro (95; 06-18-01), PJRPAPER-Chromosome II Genes,                                
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG II                               
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta                                                                     

C01G8.1 C01G8.1 P W All gene names: C01G8.1; 1F842; CE07801; WBGene00015312; WP:CE07801
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              Art-1-7, Germ line-enriched, josh laura1/2 common, PJ                              
                                              2378 IntestineMusclettest0.01, PJ 4212                                             
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome I Genes, PJRPAPER-Muslce                                
                                              (L1) negative controls-2, Proteome Cell Role (Oct                                  
                                              2000)- Genes of Unknown Ce, Proteome LG I [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

C01G8.3 C01G8.3 P W All gene names: dhs-1; C01G8.3; 1F848; CE07803; NM_059156; WBGene00000965; WP:CE07803 WormBase description: oxidoreductase
                                              
Member of lists ( lists):
                                               mount02, R=0.15, daf-16 p<.001, 7-01,                            
                                              daf-16 (p < .001), GD-Chol NSD/AMB, GD-GABA NSD/AMB                                
                                              (Anova/TTest), GD-Musc muscle, GD-U25 muscle, GD-U29                               
                                              muscle genes, Hermaphrodite-enriched, Oocyte-enriched,                             
                                              Peter's Acetyl-P001 Superset, Peter's Dorsal List                                  
                                              (02-19-01), Peter's L1-Dorsal+Excr avg (99.9), Peter's                             
                                              L2 Muscle (95 Con; 02-01-01), Peter's Neuro (95;                                   
                                              06-18-01), PJ 3085 intestinal genes, PJ 3118 intestinal                            
                                              genes, PJ 4746 intestinal gene Con95, PJRPAPER-Cholin                              
                                              Superset, PJRPAPER-Chromosome I Genes, PJRPAPER-Oocyte                             
                                              Genes, PJRPAPER-Oxidoreductase, PJRPAPER-zU29WLev nsd,                             
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome Funct Class (Mar                                     
                                              2000)-Oxidoreductases, Proteome LG I [May 2002], Reinke                            
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

C01G8.4 C01G8.4 P W All gene names: dnj-4; C01G8.4; 1F850; CE26905; NM_059157; WBGene00001022; WP:CE26905 WormBase description: This gene encodes a protein containing a DnaJ ('J') domain.
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount02, R=0.15,                                 
                                              daf-16 p<.001, 7-01, daf-16 (p < .001), GD-GABA "\/"                               
                                              (Anova/TTest), GD-U25 muscle, Peter's Neuro (95;                                   
                                              06-18-01), Peter's Neuro (99; 06-18-01), Peter's Neuro                             
                                              (99.9; 06-18-01), Peter's Neuro-non-musc(sp&enri;fr99.9                            
                                              Superset), PJ 1158IntestineMuscleTTEST0.001, PJ 1235                               
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Chromosome I Genes, Protein expression,                            
                                              Proteome Cell Role (Oct 2000)- Protein Folding,                                    
                                              Proteome Funct Class (Mar 2000)-Chaperones, Proteome LG                            
                                              I [May 2002], Reinke et al 2004, list of genes in                                  
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              YK genes 95% different in muscle and intestin                                      

C01H6.1 C01H6.1 P W All gene names: col-61; C01H6.1; 1H778; CE05184; NM_059634; WBGene00000637; WP:CE05184 WormBase description: collagen
                                              
Member of lists ( lists):
                                               Bea ras L2 mixed 561,  bea RasL2 486                             
                                              genes,  mount16, R=0.40, Bea Ras L2 time course (99%),                             
                                              Collagen, FP 645 Intestine specific genes, FP 1938                                 
                                              Intestine genes, JW Dauer ANOVA 2430 v4, JW Dauer                                  
                                              Recovery Specific 1984, JW Late 325, PJ 1235                                       
                                              intestine-sepcific, PJ 3085 intestinal genes, PJ 3118                              
                                              intestinal genes, PJ 4212 IntestineMuscleTtest0.05, PJ                             
                                              4746 intestinal gene Con95, PJRGDPAPER-Collagens (All),                            
                                              PJRGDPAPER-Collagens (Non-BM), PJRGDPAPER-Collagens                                
                                              (unspecified), PJRPAPER-Chromosome I Genes,                                        
                                              PJRPAPER-Collagens, PJRPAPER-Cuticle Collagens,                                    
                                              PJRPAPER-Cuticle Collogens Grp1a, PJRPAPER-Muslce (L1)                             
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG I [May 2002], rasl2,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, YK genes 95% different in muscle and intestin,                            
                                              YK intestinal genes (p<.001), YK intestine-specific                                
                                              genes                                                                              

C01H6.7 C01H6.7 P W All gene names: tag-298; C01H6.7; 1H803; CE05190; WBGene00007256; WP:CE05190 WormBase description: Bromodomain
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer13,                                
                                              Art-1-7, daf-16 p<.001, 7-01, Oocyte-enriched, PJ                                  
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ No 2 first 1500,                                      
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-Oocyte Genes,                                
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C01H6.8 C01H6.8 P W All gene names: C01H6.8; 1H805; CE05191; WBGene00007257; WP:CE05191
                                              
Member of lists ( lists):
                                               mount05, R=0.22, FP 645 Intestine                                
                                              specific genes, FP 1938 Intestine genes, Peter's Neuro                             
                                              (95; 06-18-01), Peter's Neuro (99; 06-18-01), PJ 3118                              
                                              intestinal genes, PJ 4746 intestinal gene Con95,                                   
                                              PJRPAPER-Chromosome I Genes, Proteome Cell Role (Oct                               
                                              2000)- Genes of Unknown Ce, Proteome LG I [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order, YK                              
                                              genes 95% different in muscle and intestin, YK                                     
                                              intestinal genes (p<.001), YK intestine-specific genes                             

C01H6.9 C01H6.9 P W All gene names: C01H6.9; 1H806; CE07824; WBGene00007258; WP:CE07824 WormBase description: C01H6.9 encodes a homolog of haploid germ cell-specific nuclear protein kinase (haspin) that specifically binds GOA-1 in yeast two-hybrid assays; C01H6.9 is expressed in PHB sensory neurons and PVT interneurons in the tail, several unidentified neurons in the head (with projections to the nose and nerve ring), and intestinal cells, with mainly nuclear localization; C01H6.9 has no obvious function or phenotype in RNAi assays, either alone or with inactivation of a close paralog (F22H10.5). WormBase CDS description: Eukaryotic protein kinase domain
                                              
Member of lists ( lists):
                                               mount02, R=0.15, Bea L2 mixed 709,                               
                                              Bea Ras L2 time course (99%), GD-Chol "\/", GD-GABA                                
                                              "\/" (Anova/TTest), GD-U25 muscle, GD-U29-Sp (wrt Lev                              
                                              95), GD-U29 muscle genes, GD-U29-Sp (wrt L1 95),                                   
                                              Peter's Acetyl-P001 Superset, PJ 2378                                              
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Cholin Superset,                                
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, PJRPAPER-xU29-specific (wrtWT),                               
                                              PJRPAPER-zU29WLev down-up, PJRPAPER-zU29-Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], rasl2, Reinke et al 2004,                                
                                              list of genes in cluster order, rosetta, Valerie                                   
                                              Reinke's 11927 genes                                                               

C02B10.2 C02B10.2 P W All gene names: C02B10.2; 4F854; CE24776; WBGene00015327; WP:CE24776
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount07, R=0.43,                                 
                                              stuart layer13, Art-1-7, FP 1938 Intestine genes, Germ                             
                                              line-enriched, PJ 3085 intestinal genes, PJ 3118                                   
                                              intestinal genes, PJ 4746 intestinal gene Con95,                                   
                                              PJRPAPER-Chromosome IV Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK intestinal                               
                                              genes (p<.001)                                                                     

C02B10.4 C02B10.4 P W All gene names: C02B10.4; C02B10.4.1; C02B10.4.2; 4F857; CE16801; WBGene00015329; WP:CE16801
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount11, R=0.38,                                 
                                              Peter's L2 Muscle (95 Con; 02-01-01), PJ 4746                                      
                                              intestinal gene Con95, PJRPAPER-Chromosome IV Genes,                               
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C02B10.5 C02B10.5 P W All gene names: C02B10.5; C02B10.5.1; C02B10.5.2; C02B10.5.3; 4F851; CE16802; WBGene00015330; WP:CE16802
                                              
Member of lists ( lists):
                                               mount05, R=0.22,  stuart layer13,                                
                                              age1-216daf2-1384All In age1daf2 modif 703 mi, Art-1-7,                            
                                              daf-2 1384 min, daf-2 1384 InAgingSetMin3ClusterC,                                 
                                              GDPAPER-Prelim Mixed Muscle, josh laura2 4/8 common,                               
                                              Peter's All Muscle Genes (1 16 01), Peter's UP-Reg                                 
                                              Muscle (10 25 00), PJRPAPER-Chromosome IV Genes,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, Valerie Reinke's 11927 genes                               

C02B10.6 C02B10.6 P W All gene names: C02B10.6; 4F837; CE20481; WBGene00015331; WP:CE20481
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Art-1-7, male99,                                
                                              Male-enriched, Peter's Acetyl-P001 Superset, Peter's                               
                                              All Muscle Genes (1 16 01), Peter's L1 Muscle Genes (95                            
                                              Con; 02-01-01), Peter's Musc-non-neuro(sp&enri;fr99.9                              
                                              Superset), Peter's ventral muscle-Specific (p<0.05),                               
                                              Peter's Ventral-Specific L1 (95) list (02-28-01),                                  
                                              Peters L1-Specific, PJRPAPER-Chromosome IV Genes,                                  
                                              PJRPAPER-Male Genes, PJRPAPER-Muslce (L1) negative                                 
                                              controls-2, PJRPAPER-Protein Phosphotases, Protein                                 
                                              phosphatases, Proteome Cell Role (Oct 2000)- Protein                               
                                              Modificatio, Proteome Funct Class (Mar 2000)-Protein                               
                                              Phosphotas, Proteome Funct Class (Mar 2000)-Hydrolase,                             
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta                                                    

C02D5.1 C02D5.1 P W All gene names: C02D5.1; 3J649; CE24778; WBGene00015335; WP:CE24778 WormBase description: Isovaleryl-CoA dehydrogenase
                                              
Member of lists ( lists):
                                              703 InParaquatMin 109,  mount14,                                  
                                              R=0.38, age1-216daf2-1384All In age1daf2 modif 703 mi,                             
                                              Biosynthesis, daf-2 1384 min, daf-2 1384                                           
                                              InAgingSetMin3ClusterA, Fatty acid oxidation genes, JW                             
                                              Dauer ANOVA 2430 v4, JW Dauer Recovery Specific 1984,                              
                                              JW Late 325, Lipid metabolism genes, PJ 2378                                       
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-Lipid, fatty-acid and sterol                                       
                                              metabolism, PJRPAPER-Oxidoreductase, Proteome Cell Role                            
                                              (Oct 2000)- Lipid, Sterol & Fat, Proteome Funct Class                              
                                              (Mar 2000)-Oxidoreductases, Proteome LG III [May 2002],                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

C02D5.2 C02D5.2 P W All gene names: C02D5.2; 3J647; CE00034; CE39554; WBGene00015336; WP:CE00034; WP:CE39554
                                              
Member of lists ( lists):
                                               mount01, R=0.15, FP 464 Muscle                                   
                                              specific genes, GD-Chol Down, GD-GABA NSD/AMB                                      
                                              (Anova/TTest), GD-L1 Muscle Genes, GD-WT-Sp (wrt Lev                               
                                              95), JW 1703 merged Peters zMuscle 8-02, JW Dauer ANOVA                            
                                              2430 v4, JW Dauer Recovery Specific 1984, JW Early 538,                            
                                              Peter's Acetyl-P001 Superset, Peter's All Muscle Genes                             
                                              (1 16 01), Peter's L1 Muscle Genes (95 Con; 02-01-01),                             
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's Superset                             
                                              of L1-L2 Genes (considering 99.9, Peter's ventral                                  
                                              muscle-Specific (p<0.05), Peter's Ventral-Specific L1                              
                                              (95) list (02-28-01), PJRPAPER-1329 L1 Muscle Genes                                
                                              (Chromo III), PJRPAPER-1329 L1 Muscle List (genes                                  
                                              without 1, PJRPAPER-Cholin Superset,                                               
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-L1 Muscle Genes                            
                                              (95), PJRPAPER-L1 Muscle Genes (1364),                                             
                                              PJRPAPER-xWT-specific (wrtLEV), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zU29WLev down,                                
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin,                              
                                              YK muscle-specific genes                                                           

C02E11.1 C02E11.1 P W All gene names: C02E11.1; C02E11.1a.1; C02E11.1a.2; 5B508; CE28528; CE32040; WBGene00015344; WP:CE28528; WP:CE32040
                                              
Member of lists ( lists):
                                               mount05, R=0.22,  stuart layer7,                                 
                                              stuart layer10, age1-216daf2-1384All In age1daf2 modif                             
                                              703 mi, daf-2 1384 min, daf-2 1384                                                 
                                              InAgingSetMin3ClusterC, JW Common Kinetics 446 v3, JW                              
                                              Dauer ANOVA 2430 v4, JW SAGE Dauer all, JW SAGE Dauer                              
                                              on Array v1, PJ 3085 intestinal genes, PJ 3118                                     
                                              intestinal genes, PJ 4746 intestinal gene Con95,                                   
                                              PJRPAPER-Chromosome V Genes, Proteome Cell Role (Oct                               
                                              2000)- Genes of Unknown Ce, Proteome LG V [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta                                                                            

C02E7.6 C02E7.6 P W All gene names: C02E7.6; 5F397; CE07843; WBGene00015339; WP:CE07843
                                              
Member of lists ( lists):
                                               mount14, R=0.38,  stuart layer12,                                
                                              age1-216daf2-1384All In age1daf2 modif 703 mi, age-1                               
                                              daf-2 comm 999 InAge1daf2ClusterBD 133., daf-2 1384                                
                                              min, daf-2 1384 InAgingSetMin3ClusterA, GD-Chol "/\",                              
                                              GD-GABA Down (Anova/TTest), GD-L1 Muscle Genes,                                    
                                              GD-L1-Sp (wrt U29 95), GD-L2 Muscle Genes, GD-WT-Sp                                
                                              (wrt Lev 95), JW 1703 merged Peters zMuscle 8-02, JW                               
                                              Climbing 386, JW Dauer ANOVA 2430 v4, JW Dauer Recovery                            
                                              Specific 1984, Neuro-1 L1 Upreg (11 20 00), Peter's                                
                                              Acetyl-P001 Superset, Peter's All Muscle Genes (1 16                               
                                              01), Peter's Dorsal List (02-19-01), Peter's                                       
                                              L1-Dorsal+Excr avg (99.9), Peter's L1 Muscle Genes (95                             
                                              Con; 02-01-01), Peter's L2 Muscle (95 Con; 02-01-01),                              
                                              Peter's Musc-non-neuro(sp&enri;fr99.9 Superset),                                   
                                              Peter's Superset of L1-L2 Genes (considering 99.9, PJ                              
                                              836 muscle and intestine in common, PJ 1005I0.05M0.001,                            
                                              PJ 1445 M0.05I0.001, PJ 1617  Muscle and intestine in                              
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No4 first1500, PJ No5 first                              
                                              1500, PJ No8 First 1500, PJ No10-1-R16 First 1500, PJ                              
                                              No10-1-R15 First 1500, PJRPAPER-1329 L1 Muscle Genes                               
                                              (Chromo V), PJRPAPER-1329 L1 Muscle List (genes within                             
                                              10, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V                                
                                              Genes, PJRPAPER-CLustered muscle genes (12 16 01),                                 
                                              PJRPAPER-L1 Muscle Genes (unknowns from 1329,                                      
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1 Muscle Genes                            
                                              (1364), PJRPAPER-xWT-specific (wrtLEV),                                            
                                              PJRPAPER-xWT-specific (wrtU29), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                             
                                              PJRPAPER-zU29WLev up-down, PJRPAPERz-L1 Cluster (10 kb;                            
                                              no para or ops), PJRPAPERz-L1 Clustered(without                                    
                                              Paralogues wit, Proteome Cell Role (Oct 2000)- Genes of                            
                                              Unknown Ce, Proteome LG V [May 2002], Reinke et al                                 
                                              2004, list of genes in cluster order                                               

C02E7.7 C02E7.7 P W All gene names: C02E7.7; 5F396; CE07844; WBGene00015340; WP:CE07844
                                              
Member of lists ( lists):
                                               mount16, R=0.40, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, age-1 daf-2 comm 999                                     
                                              InAge1daf2ClusterBD 133., daf-2 1384 min, daf-2 1384                               
                                              InAgingSetMin3ClusterA, GD-Chol "/\", GD-L1 Muscle                                 
                                              Genes, GD-L1-Sp (wrt U29 95), GD-WT-Sp (wrt Lev 95), JW                            
                                              1703 merged Peters zMuscle 8-02, JW Climbing 386, JW                               
                                              Dauer ANOVA 2430 v4, JW Dauer Recovery Specific 1984,                              
                                              JW SAGE mixed stage, Peter's Acetyl-P001 Superset,                                 
                                              Peter's All Muscle Genes (1 16 01), Peter's Dorsal List                            
                                              (02-19-01), Peter's L1-Dorsal+Excr avg (99.9), Peter's                             
                                              L1 Muscle Genes (95 Con; 02-01-01), Peter's L2 Muscle                              
                                              (95 Con; 02-01-01), Peter's                                                        
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, PJ 836                                  
                                              muscle and intestine in common, PJ 1005I0.05M0.001, PJ                             
                                              1445 M0.05I0.001, PJ 1617  Muscle and intestine in                                 
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No4 first1500, PJ No8 First                              
                                              1500, PJ No10-1-R16 First 1500, PJ No10-1-R15 First                                
                                              1500, PJRPAPER-1329 L1 Muscle Genes (Chromo V),                                    
                                              PJRPAPER-1329 L1 Muscle List (genes within 10,                                     
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-CLustered muscle genes (12 16 01), PJRPAPER-L1                            
                                              Muscle Genes (unknowns from 1329, PJRPAPER-L1 Muscle                               
                                              Genes (95), PJRPAPER-L1 Muscle Genes (1364),                                       
                                              PJRPAPER-xWT-specific (wrtLEV), PJRPAPER-xWT-specific                              
                                              (wrtU29), PJRPAPER-zL1 Muscle Genes, PJRPAPER-zL1vL2                               
                                              nsd, PJRPAPER-zU29WLev nsd, PJRPAPERz-L1 Cluster (10                               
                                              kb; no para or ops), PJRPAPERz-L1 Clustered(without                                
                                              Paralogues wit, Proteome Cell Role (Oct 2000)- Genes of                            
                                              Unknown Ce, Proteome LG V [May 2002], Reinke et al                                 
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

C02F12.7 C02F12.7 P W All gene names: tag-278; C02F12.7; CE03901; WBGene00015356; WP:CE03901; XE304
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount01, R=0.15,                                 
                                              GD-GABA "\/" (Anova/TTest), GD-U25 muscle, Peter's L1                              
                                              Muscle Genes (95 Con; 02-01-01), Peter's L2 Muscle (95                             
                                              Con; 02-01-01), Peter's Neuro (95; 06-18-01), Peter's                              
                                              Neuro (99; 06-18-01), Peter's Neuro (99.9; 06-18-01),                              
                                              Peter's Neuro-non-musc(sp&enri;fr99.9 Superset),                                   
                                              PJRPAPER-Chromosome X Genes, PJRPAPER-L1 Muscle Genes                              
                                              (95), Proteome LG X [May 2002], Reinke et al 2004, list                            
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes, YK genes 95% different in muscle and                                  
                                              intestin                                                                           

C02F12.8 C02F12.8 P W All gene names: C02F12.8; CE03902; WBGene00015357; WP:CE03902; XE310
                                              
Member of lists ( lists):
                                               mount13, R=0.10, PJ No 2 first 1500,                             
                                              PJRPAPER-Chromosome X Genes, Proteome Cell Role (Oct                               
                                              2000)- Genes of Unknown Ce, Proteome LG X [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C02F4.1 C02F4.1 P W All gene names: ced-5; C02F4.1; 4L257; CE24779; NM_069537; WBGene00000419; WP:CE24779 WormBase description: The ced-5 gene a homolog of the human protein DOCK180 that is required for the cell engulfment stage of programmed cell death. WormBase CDS description: DOCK180 protein
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer13, FP                             
                                              1311 similar in intestine and muscle, FP 1938 Intestine                            
                                              genes, GD-Chol NSD/AMB, GD-GABA NSD/AMB (Anova/TTest),                             
                                              GD-Lev Muscle Genes, GD-Musc muscle, GD-U29 muscle                                 
                                              genes, Peter's Acetyl-P001 Superset, Peter's L1 Muscle                             
                                              Genes (95 Con; 02-01-01), Peter's Neuro (95; 06-18-01),                            
                                              PJ 1445 M0.05I0.001, PJ 1617  Muscle and intestine in                              
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No10-1-R16 First 1500, PJ                                
                                              No10-1-R15 First 1500, PJRPAPER-Cell Death/Apoptosis,                              
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-zLev-Genes,                                
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes, programmed                             
                                              cell death, Proteome Cell Role (Oct 2000)- Genes of                                
                                              Unknown Ce, Proteome LG IV [May 2002], Reinke et al                                
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, YK intestinal genes (p<.001)                                 

C02F4.2 C02F4.2 P W All gene names: cna-1; pph-3; pph2B-A; tax-6; C02F4.2; 4L258; CE07853; CE33593; PP2B; WBGene00006527; WP:CE07853; WP:CE33593 WormBase description: tax-6 encodes an ortholog of calcineurin A that is required for inhibition and adaptation of several sensory neurons and for the normal regulation of egg-laying by serotonin; TAX-6 stimulates transcription of rcn-1, and binds RCN-1 protein if free Ca[2+] is present; in general, calcineurin positively regulates calcium-dependent signaling.
                                              
Member of lists ( lists):
                                               mount01, R=0.15, GDPAPER-Prelim Mixed                            
                                              Muscle, JW SAGE Dauer all, JW SAGE Dauer on Array v1,                              
                                              Male-enriched, Peter's All Muscle Genes (1 16 01),                                 
                                              Peter's UP-Reg Muscle (10 25 00), PJRPAPER-Chromosome                              
                                              IV Genes, PJRPAPER-Protein Phosphotases, Protein                                   
                                              phosphatases, Proteome Cell Role (Oct 2000)- Protein                               
                                              Modificatio, Proteome Cell Role (Oct 2000)- Small                                  
                                              Molecule Tran, Proteome Cell Role (Oct 2000)- Cell                                 
                                              Polarity, Proteome Cell Role (Oct 2000)- Signal                                    
                                              Transduction, Proteome Funct Class (Mar 2000)-Protein                              
                                              Phosphotas, Proteome Funct Class (Mar 2000)-Hydrolase,                             
                                              Proteome LG IV [May 2002], Proteome Localization (Oct                              
                                              2000)-Cytoplasmic, Reinke et al 2004, list of genes in                             
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              wmyst                                                                              

C02F4.4 C02F4.4 P W All gene names: C02F4.4; 4L278; CE07855; WBGene00007264; WP:CE07855
                                              
Member of lists ( lists):
                                               mount14, R=0.38, GD-Chol NSD/AMB,                                
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes, GD-U29-Sp                             
                                              (wrt L1 95), JW Dauer ANOVA 2430 v4, JW Dauer Recovery                             
                                              Specific 1984, JW Late 325, Peter's Acetyl-P001                                    
                                              Superset, Peter's Dorsal List (02-19-01), Peter's L1                               
                                              Muscle Genes (95 Con; 02-01-01), Peter's L1-Dorsal+Excr                            
                                              avg (99.9), Peter's L2 Muscle (95 Con; 02-01-01), PJ                               
                                              1445 M0.05I0.001, PJ 1617  Muscle and intestine in                                 
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No4 first1500,                                           
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              IV [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Valerie Reinke's 11927 genes                               

C02F5.1 C02F5.1 P W All gene names: knl-1; C02F5.1; 3J343; CE02450; NM_066410; WBGene00002231; WP:CE02450 WormBase description: knl-1 encodes a novel acidic protein with a coiled-coil region at its C-terminus; KNL-1 is an essential kinetochore component that is required for proper spindle elongation and chromosome separation, and in the kinetochore assembly pathway, plays a key role in linking the initiation of kinetochore formation with the construction of a functional microtubule-binding interface; in the assembly pathway, KNL-1 functions downstream of the DNA-proximal kinetochore components CeCENP-A/HCP-3 and CeCENP-B/HCP-4 and upstream of the outer kinetochore components HIM-10/Nuf2p, NDC-80/HEC1, CeBUB-1, HCP-1, and CeCLASP2/CLS-2; in expression studies in the one-cell embryo, KNL-1 localizes to kinetochores throughout mitosis.
                                              
Member of lists ( lists):
                                               mount05, R=0.22, daf-16 p<.001, 7-01,                            
                                              PJ 1158IntestineMuscleTTEST0.001, PJ 2378                                          
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No 2 first 1500, PJRPAPER-Chromosome III                                 
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG III [May 2002], Reinke et al 2004, list                            
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes                                                                        

C02F5.3 C02F5.3 P W All gene names: C02F5.3; 3J337; CE36094; WBGene00015346; WP:CE36094 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: GTP-binding protein
                                              
Member of lists ( lists):
                                               mount02, R=0.15, Aging p < .01,                                  
                                              GD-Chol "\/", GD-Lev Muscle Genes, GD-Lev-Sp (wrt wt                               
                                              95), GD-U29 muscle genes, GD-U29-Sp (wrt L1 95),                                   
                                              Peter's Acetyl-P001 Superset, Peter's L2 Muscle (95                                
                                              Con; 02-01-01), PJ 1235 intestine-sepcific, PJ 3085                                
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4212                                
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No10-1-R15 First 1500, PJ No10-1-R16 First                               
                                              1500, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome III                            
                                              Genes, PJRPAPER-xLEV-specific (wrtWT),                                             
                                              PJRPAPER-xU29-specific (wrtWT), PJRPAPER-zLev-Genes,                               
                                              PJRPAPER-zU29WLev down-up, PJRPAPER-zU29-Genes,                                    
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, wmyst                                                                       

C02F5.4 C02F5.4 P W All gene names: C02F5.4; 3J335; CE38771; WBGene00015347; WP:CE38771
                                              
Member of lists ( lists):
                                               mount07, R=0.43, operon first genes,                             
                                              PJ 2378 IntestineMusclettest0.01, PJ 4212                                          
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome III                                  
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG III [May 2002], Reinke et al 2004, list                            
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes, YK genes 95% different in muscle and                                  
                                              intestin                                                                           

C02F5.5 C02F5.5 P W All gene names: C02F5.5; 3J325; CE00041; WBGene00015348; WP:CE00041
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount04, R=0.41,                                 
                                              age1-216daf2-1384All In age1daf2 modif 703 mi, Art-1-7,                            
                                              cluster 227 min, daf-2 1384 min, daf-2 1384                                        
                                              InAgingSetMin3ClusterA, daf-16 min, FP 1938 Intestine                              
                                              genes, josh laura1/2 common, PJ                                                    
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome III Genes, PJRPAPER-Muslce                              
                                              (L1) negative controls-2, PJRPAPER-Sperm Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Sperm-enriched,                                   
                                              Valerie Reinke's 11927 genes, YK intestinal genes                                  
                                              (p<.001), YK Similar muscle and intestine genes                                    

C02F5.6 C02F5.6 P W All gene names: C02F5.6; CE00042; CE30417; NM_171212; NM_171213; WBGene00015349; WP:CE00042; WP:CE30417
                                              
Member of lists ( lists):
                                               mount02, R=0.15, daf-16 p<.001, 7-01,                            
                                              FP 645 Intestine specific genes, FP 1938 Intestine                                 
                                              genes, PJ 1158IntestineMuscleTTEST0.001, PJ 2378                                   
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome III                                  
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG III [May 2002], Reinke et al 2004, list                            
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes, YK genes 95% different in muscle and                                  
                                              intestin                                                                           

C02F5.7 C02F5.7 P W All gene names: C02F5.7; C02F5.7a.1; C02F5.7a.2; C02F5.7a.3; C02F5.7a.4; C02F5.7b.1; C02F5.7b.2; C30A5.1; CE24780; CE30418; NM_171210; NM_171211; WBGene00015350; WP:CE24780; WP:CE30418 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists ( lists):
                                               mount06, R=0.21, JW AdjD T0 vs AdjD                              
                                              T12 short 406, JW Dauer ANOVA 2430 v4, JW Dauer                                    
                                              Enriched AdjT0 vs AdjT12, JW Dauer Recovery Specific                               
                                              1984, JW Down 540, JW Down Late 162, operon first                                  
                                              genes, PJRPAPER-Chromosome III Genes, Proteome Cell                                
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG III                              
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C03A7.14 C03A7.14 P W All gene names: abu-8; pqn-4; C03A7.14; 5F672; CE07872; NM_071992; WBGene00000031; WP:CE07872 WormBase description: abu-8 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-8 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-8 may help protect the organism from damage by improperly folded nascent protein.
                                              
Member of lists ( lists):
                                               mount29, R=0.53, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, daf-2 1384 min, daf-2 1384                               
                                              InAgingSetMin3ClusterA, PJRPAPER-Chromosome V Genes,                               
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C03A7.4 C03A7.4 P W All gene names: pqn-5; C03A7.4; 5F633; CE07862; NM_071981; WBGene00004099; WP:CE07862 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
                                              
Member of lists ( lists):
                                               mount29, R=0.53, GD-Chol "/\", GD-L1                             
                                              Muscle Genes, GD-L1-Sp (wrt U29 95), GD-WT-Sp (wrt Lev                             
                                              95), JW 1703 merged Peters zMuscle 8-02, Peter's                                   
                                              Acetyl-P001 Superset, Peter's All Muscle Genes (1 16                               
                                              01), Peter's L1 Muscle Genes (95 Con; 02-01-01),                                   
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's                                      
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, Peter's                                 
                                              ventral muscle-Specific (p<0.05), Peter's                                          
                                              Ventral-Specific L1 (95) list (02-28-01), PJ 836 muscle                            
                                              and intestine in common, PJ 1005I0.05M0.001, PJ 1445                               
                                              M0.05I0.001, PJ 1617  Muscle and intestine in common,                              
                                              PJ 1899 IntestineMuscleCon95incommon, PJ 3085                                      
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJRPAPER-1329 L1 Muscle Genes                               
                                              (Chromo V), PJRPAPER-1329 L1 Muscle List (genes without                            
                                              1, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V                                 
                                              Genes, PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1                                  
                                              Muscle Genes (1364), PJRPAPER-xWT-specific (wrtLEV),                               
                                              PJRPAPER-xWT-specific (wrtU29), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zU29WLev up-down,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C03A7.7 C03A7.7 P W All gene names: abu-6; pqn-6; C03A7.7; 5F636; CE07865; NM_071982; WBGene00000029; WP:CE07865 WormBase description: abu-6 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-6 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-6 may help protect the organism from damage by improperly folded nascent protein.
                                              
Member of lists ( lists):
                                               mount29, R=0.53, JW Dauer ANOVA 2430                             
                                              v4, JW Dauer Recovery Specific 1984, JW Late 325,                                  
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-Muscle negative                              
                                              controls, Proteome Cell Role (Oct 2000)- Genes of                                  
                                              Unknown Ce, Proteome LG V [May 2002], Reinke et al                                 
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

C03A7.8 C03A7.8 P W All gene names: abu-7; pqn-7; C03A7.8; 5F638; CE07866; NM_071983; WBGene00000030; WP:CE07866 WormBase description: abu-7 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-7 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-7 may help protect the organism from damage by improperly folded nascent protein.
                                              
Member of lists ( lists):
                                               mount29, R=0.53, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, daf-2 1384 min, daf-2 1384                               
                                              InAgingSetMin3ClusterA, Peter's UP-Reg Muscle (10 25                               
                                              00), PJRPAPER-Chromosome V Genes, PJRPAPER-Muslce (L1)                             
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG V [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

C03B8.4 C03B8.4 P W All gene names: lin-13; lin-51; C03B8.4; 3I790; CE30419; NM_066277; WBGene00003002; WP:CE30419 WormBase description: Gene Function : lin-13 encodes a large (2248-residue) nuclear protein with multiple zinc fingers of the C2H2 class and a LXCXE retinoblastoma protein-binding motif, that is required for survival through larval development and for negative regulation of vulval fates during postembryonic development. WormBase CDS description: Zinc finger
                                              
Member of lists ( lists):
                                               mount05, R=0.22, C. elegans                                      
                                              transcription factors, Male-enriched, Peter's UP-Reg                               
                                              Muscle (10 25 00), PJRPAPER-Chromosome III Genes,                                  
                                              PJRPAPER-Transcription factors (good list), Proteome                               
                                              Cell Role (Oct 2000)- Differentiation, Proteome Funct                              
                                              Class (Mar 2000)-Transcription Fact, Proteome LG III                               
                                              [May 2002], Proteome Localization (Oct 2000)-Nuclear,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C03C10.2 C03C10.2 P W All gene names: C03C10.2; 3F181; CE00873; WBGene00007269; WP:CE00873 WormBase description: serine/threonine kinase
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount00, R=0.11,                                 
                                              Peter's All Muscle Genes (1 16 01), PJRPAPER-Casein                                
                                              Kinases, PJRPAPER-Chromosome III Genes, PJRPAPER-Muslce                            
                                              (L1) negative controls-2, PJRPAPER-Serine/Threonine                                
                                              Kinases, Protein kinases, Proteome Cell Role (Oct                                  
                                              2000)- Signal Transduction, Proteome Funct Class (Mar                              
                                              2000)-Protein Kinase, Proteome LG III [May 2002],                                  
                                              Reinke et al 2004, list of genes in cluster order                                  

C03C10.3 C03C10.3 P W All gene names: rnr-2; C03C10.3; C03C10.3.1; C03C10.3.2; C03C10.3.3; 3F184; CE00874; NM_065420; WBGene00004392; WP:CE00874 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial. WormBase CDS description: Ribonuclease-diphosphate reductase M2
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              Art-1-7, Biosynthesis, JW Nucleotide Metabolism,                                   
                                              Nucleotide synthesis genes, Oocyte-enriched, PJ                                    
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Chromosome III Genes,                                              
                                              PJRPAPER-Nucleotide Metabolism, PJRPAPER-Oocyte Genes,                             
                                              PJRPAPER-Oxidoreductase, Proteome Cell Role (Oct 2000)-                            
                                              Nucleotide Synthesi, Proteome Funct Class (Mar                                     
                                              2000)-Oxidoreductases, Proteome LG III [May 2002],                                 
                                              Proteome Localization (Oct 2000)-Cytoplasmic, Reinke et                            
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              Valerie Reinke's 11927 genes, wmyst                                                

C03C10.4 C03C10.4 P W All gene names: C03C10.4; 3F186; CE00875; WBGene00007270; WP:CE00875
                                              
Member of lists ( lists):
                                               mount07, R=0.43, JW Dauer Enriched                               
                                              AdjT0 vs AdjT12, JW Dauer Enriched by AdjDT0 vs L1T0,                              
                                              PJ 1235 intestine-sepcific, PJ 2378                                                
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome III Genes, Proteome Cell                                
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG III                              
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

C03C10.6 C03C10.6 P W All gene names: C03C10.6; CE30720; NM_065416; WBGene00007272; WP:CE30720
                                              
Member of lists ( lists):
                                               mount01, R=0.15, PJ 4746 intestinal                              
                                              gene Con95, PJRPAPER-Chromosome III Genes, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              III [May 2002], Ras spe99, Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C03C11.1 C03C11.1 P W All gene names: C03C11.1; 1K591; CE07873; WBGene00007274; WP:CE07873
                                              
Member of lists ( lists):
                                               mount04, R=0.41, male99,                                         
                                              Male-enriched, PJ 1235 intestine-sepcific, PJ 2378                                 
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome I Genes, PJRPAPER-Male                                  
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG I [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

C03C11.2 C03C11.2 P W All gene names: fog-3; C03C11.2; 1K593; CE07874; NM_060245; WBGene00001483; WP:CE07874 WormBase description: fog-3 encodes a protein that has similarity, in its N-terminus, to the vertebrate Tob, BTG1, and BTG2 proteins that function in growth control and/or differentiation; in C. elegans, FOG-3 activity is required in the germ line throughout development for initiation and maintenance of spermatogenesis; fog-3 mRNA is expressed at highest levels in the L3, L4, and young adult stages of development, when spermatogenesis occurs; fog-3 transcription appears to be under the control of TRA-1A, which interacts with predicted TRA-1A binding sites in the fog-3 promoter in vitro.
                                              
Member of lists ( lists):
                                               mount04, R=0.41, PJ negative control,                            
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-Muscle negative                              
                                              controls, PJRPAPER-Muslce (L1) negative controls-2,                                
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG I [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

C03D6.3 C03D6.3 P W All gene names: cel-1; C03D6.3; 1K243; CE05197; CE32300; NM_060168; WBGene00000466; WP:CE05197; WP:CE32300 WormBase description: cel-1 encodes a mRNA capping enzyme, with a N-terminal region with RNA triphosphatase activity and a C-terminal region containing motifs found in yeast and vaccinia virus capping enzyme guanylytransferases; cel-1 is required for embryonic viability, body morphology, and vulval development.
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount05, R=0.22,                                 
                                              Fraser's Complete RNAi List, Fraser's Dpy (02-01-01),                              
                                              Fraser's Molting Defects (02-01-01), Fraser's                                      
                                              Morphological Defects (02-01-01), general, general cell                            
                                              funcs, JW SAGE Dauer all, JW SAGE Dauer on Array v1, PJ                            
                                              4212 IntestineMuscleTtest0.05, PJRPAPER-Chromosome I                               
                                              Genes, PJRPAPER-Other Phosphotases, PJRPAPER-RNA                                   
                                              Processing, Protein expression, Proteome Cell Role (Oct                            
                                              2000)- RNA Processing/Modi, Proteome Funct Class (Mar                              
                                              2000)-Transferase, Proteome Funct Class (Mar                                       
                                              2000)-Other Phosphotases, Proteome LG I [May 2002],                                
                                              Proteome Localization (Oct 2000)-Nuclear, Reinke et al                             
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, YK genes 95% different in muscle                             
                                              and intestin                                                                       

C03D6.4 C03D6.4 P W All gene names: npp-14; C03D6.4; 1K238; CE05198; CeNup214; NM_060167; WBGene00003800; WP:CE05198 WormBase description: npp-14 is orthologous to the human gene NUCLEOPORIN, 214-KD (NUP214; OMIM:114350), which encodes part of the nucleopore complex mediating nucleocytoplasmic transport; NUP214, as a fusion gene with DEK (OMIM:125264), is found in a subset of acute myeloid leukemia. WormBase CDS description: nucleoporin
                                              
Member of lists ( lists):
                                              204 diff min, 684 N2 hs min (L2), 1003                            
                                              N2 hs min (egg + L2),  mount05, R=0.22,  stuart layer9,                            
                                              josh laura2 4/8 common, L2 Hs genes 99.9, PJ                                       
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ No4 first1500, PJ No5                                 
                                              first 1500, PJ No 2 first 1500, PJRPAPER-Chromosome I                              
                                              Genes, PJRPAPER-Nucleus (non-TF, enz, nucleolus),                                  
                                              Proteome Cell Role (Oct 2000)- Nuclear-Cytoplasmic,                                
                                              Proteome Funct Class (Mar 2000)-Nuclear import/exp,                                
                                              Proteome LG I [May 2002], Proteome Localization (Oct                               
                                              2000)-Nuclear, Proteome Localization (Oct 2000)-Nuclear                            
                                              pore, Reinke et al 2004, list of genes in cluster                                  
                                              order, rosetta, YK genes 95% different in muscle and                               
                                              intestin                                                                           

C03D6.5 C03D6.5 P W All gene names: C03D6.5; 1K235; CE36095; WBGene00007277; WP:CE36095 WormBase description: anti-silencing protein
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount07, R=0.43,                                 
                                              Art-1-7, PJ 1158IntestineMuscleTTEST0.001, PJ 1235                                 
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Chromosome I Genes, Proteome Cell Role                             
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG I [May                                
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

C03D6.6 C03D6.6 P W All gene names: C03D6.6; 1K232; CE15580; WBGene00007278; WP:CE15580
                                              
Member of lists ( lists):
                                               mount07, R=0.43, josh laura1/2                                   
                                              common, JW SAGE mixed stage, PJRPAPER-Chromosome I                                 
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order                                                             

C03E10.4 C03E10.4 P W All gene names: gly-20; C03E10.4; 5L765; CE26613; GnT II; MGAT2; NM_073463; WBGene00001645; WP:CE26613 WormBase description: gly-20 is orthologous to the human gene MANNOSYL (ALPHA-1,6-)-GLYCOPROTEIN BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE (MGAT2; OMIM:602616), which when mutated leads to carbohydrate-deficient glycoprotein syndrome, type II. WormBase CDS description: UDP-GlcNAc:a-6-D-mannoside b1,2-N-acetylglucosaminyltransferase II
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Aging p < .01,                                  
                                              PJRPAPER-Chromosome V Genes, Proteome LG V [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

C03E10.5 C03E10.5 P W All gene names: C03E10.5; 5L757; CE15585; WBGene00007282; WP:CE15585
                                              
Member of lists ( lists):
                                               mount22, R=0.58, Proteome Cell Role                              
                                              (Oct 2000)- Genes of Unknown Ce, Proteome Funct Class                              
                                              (Mar 2000)-Small Molecule Bin, Proteome LG V [May                                  
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C03E10.6 C03E10.6 P W All gene names: C03E10.6; 5L753; CE15586; WBGene00007283; WP:CE15586
                                              
Member of lists ( lists):
                                               mount22, R=0.58, Bea lectin, Highly                              
                                              regulated #2, josh laura1/2 common, PJ No 2 first 1500,                            
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG V [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

C03F11.2 C03F11.2 P W All gene names: C03F11.2; CE35379; WBGene00015388; WP:CE35379; XG10
                                              
Member of lists ( lists):
                                               mount00, R=0.11, JW SAGE Dauer all,                              
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG X [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order                                                             

C03F11.3 C03F11.3 P W All gene names: C03F11.3; CE37606; WBGene00015389; WP:CE37606; XG16 WormBase description: glycoprotein
                                              
Member of lists ( lists):
                                              Cell Structure, FP 1938 Intestine                                 
                                              genes, PJ 1158IntestineMuscleTTEST0.001, PJ 2378                                   
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome X Genes, Proteome Cell Role                             
                                              (Oct 2000)- Cell Structure, Proteome LG X [May 2002],                              
                                              Proteome Localization (Oct 2000)-Unspecified membr,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK intestinal                               
                                              genes (p<.001), YK Similar muscle and intestine genes                              

C03G5.1 C03G5.1 P W All gene names: C03G5.1; C03G5.1.1; C03G5.1.2; CE03917; WBGene00015391; WP:CE03917; XJ162 WormBase description: C03G5.1 is orthologous to the human gene SUCCINATE DEHYDROGENASE COMPLEX, SUBUNIT A, FLAVOPROTEIN (SDHA; OMIM:600857), which when mutated leads to complex II mitochondrial respiratory chain deficiency presenting as Leigh syndrome. WormBase CDS description: succinate dehydrogenase flavoprotein subunit
                                              
Member of lists ( lists):
                                               mount27, R=0.48,  stuart layer7,                                 
                                              stuart layer12, Biosynthesis, Carbohydrate metabolism,                             
                                              Citric Acid Cycle/Krebs cycle, Energy generation genes,                            
                                              JW Glyoxylate & Gluconeogenesis, JW TCA, Mitochondrial,                            
                                              PJRGDPAPER-Yeast Mito (All)-Worm Homologues,                                       
                                              PJRGDPAPER-Yeast Mito (Prokaryotic)-Worm Homo,                                     
                                              PJRPAPER-Carbohydrate Metabolism, PJRPAPER-Chromosome X                            
                                              Genes, PJRPAPER-Energy Generation,                                                 
                                              PJRPAPER-Mitochondrial, PJRPAPER-Oxidoreductase,                                   
                                              Proteome Cell Role (Oct 2000)- Energy Generation,                                  
                                              Proteome Cell Role (Oct 2000)- Carbohydrate Metabo,                                
                                              Proteome Funct Class (Mar 2000)-Oxidoreductases,                                   
                                              Proteome LG X [May 2002], Proteome Localization (Oct                               
                                              2000)-Mitochondrial, Proteome Localization (Oct                                    
                                              2000)-Mitochondrial inn, Proteome Subcellular                                      
                                              Localization - Mitochond, Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, wmyst                                                                       

C03G6.19 C03G6.19 P W All gene names: srp-6; C03G6.19; 5H866; CE27579; NM_072489; WBGene00005647; WP:CE27579 WormBase description: srp-6 encodes a functional serpin (serine protease inhibitor) WormBase CDS description: serine protease inhibitor
                                              
Member of lists ( lists):
                                               mount08, R=0.21, daf-2 1384 min,                                 
                                              daf-2 1384 InAgingSetMin3ClusterA, Peter's L2 Muscle                               
                                              (95 Con; 02-01-01), PJ 4212 IntestineMuscleTtest0.05,                              
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-Protein                                      
                                              Degradation, Proteases, Proteome Cell Role (Oct 2000)-                             
                                              Protein Degradation, Proteome Funct Class (Mar                                     
                                              2000)-Inhibitor or Repre, Proteome LG V [May 2002],                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, YK genes 95% different in muscle and intestin                             

C03H5.1 C03H5.1 P W All gene names: clec-10; C03H5.1; 2A693; CE32109; WBGene00015403; WP:CE32109 WormBase description: 7TM chemoreceptor, clec family
                                              
Member of lists ( lists):
                                               mount16, R=0.40, Bea lectin, FP 1938                             
                                              Intestine genes, JW Climbing 386, JW Dauer ANOVA 2430                              
                                              v4, JW Dauer Recovery Specific 1984, JW SAGE mixed                                 
                                              stage, Peter's Dorsal List (02-19-01), Peter's                                     
                                              L1-Dorsal+Excr avg (99.9), PJ 1235 intestine-sepcific,                             
                                              PJ 2378 IntestineMusclettest0.01, PJ 3085 intestinal                               
                                              genes, PJ 3118 intestinal genes, PJ 4212                                           
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No4 first1500, PJ No10-1-R15 First 1500, PJ                              
                                              No10-1-R16 First 1500, PJRPAPER-Chromosome II Genes,                               
                                              PJRPAPER-Extracellular (not cell wall or collagen),                                
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG II [May 2002], Proteome Localization (Oct                              
                                              2000)-Extracellular (ex, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK intestinal genes (p<.001), YK Similar muscle                             
                                              and intestine genes                                                                

C04B4.2 C04B4.2 P W All gene names: C04B4.2; CE05204; WBGene00007290; WP:CE05204; XM903
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              Oocyte-enriched, PJ 4212 IntestineMuscleTtest0.05,                                 
                                              PJRPAPER-Chromosome X Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, PJRPAPER-Oocyte Genes, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              X [May 2002], Reinke et al 2004, list of genes in                                  
                                              cluster order, rosetta, Valerie Reinke's 11927 genes                               

C04C11.2 C04C11.2 P W All gene names: C04C11.2; C04C11.2.1; C04C11.2.2; CE05210; WBGene00007296; WP:CE05210; XO655
                                              
Member of lists ( lists):
                                               mount01, R=0.15, PJRPAPER-Chromosome                             
                                              X Genes, Proteome Cell Role (Oct 2000)- Genes of                                   
                                              Unknown Ce, Proteome LG X [May 2002], Reinke et al                                 
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, YK genes 95% different in muscle                             
                                              and intestin                                                                       

C04E12.11 C04E12.11 P W All gene names: C04E12.11; 5D862; CE35220; WBGene00015440; WP:CE35220
                                              
Member of lists ( lists):
                                               mount09, R=0.16, Aging p < .01,                                  
                                              GDPAPER-Prelim Mixed Muscle, JW Dauer ANOVA 2430 v4, JW                            
                                              Dauer Recovery Specific 1984, JW Early 538, Peter's All                            
                                              Muscle Genes (1 16 01), Peter's L1 Muscle Genes (95                                
                                              Con; 02-01-01), Peter's L2 Muscle (95 Con; 02-01-01),                              
                                              Peter's Neuro (95; 06-18-01), Peter's UP-Reg Muscle (10                            
                                              25 00), PJ 4212 IntestineMuscleTtest0.05, PJ No 2 first                            
                                              1500, PJRPAPER-Chromosome V Genes, PJRPAPER-L1 Muscle                              
                                              Genes (95), Proteome Cell Role (Oct 2000)- Genes of                                
                                              Unknown Ce, Proteome LG V [May 2002], Reinke et al                                 
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

C04E12.12 C04E12.12 P W All gene names: C04E12.12; 5D864; CE39556; WBGene00015441; WP:CE39556
                                              
Member of lists ( lists):
                                               Bea ras L2 mixed 561,  bea RasL2 486                             
                                              genes,  mount23, R=0.53,  stuart layer7, Aging.p01, Bea                            
                                              Ras L2 time course (99%), FP 1311 similar in intestine                             
                                              and muscle, GD-Chol "/\", GD-L1 Muscle Genes, GD-L1-Sp                             
                                              (wrt U29 95), GD-WT-Sp (wrt Lev 95), JW 1703 merged                                
                                              Peters zMuscle 8-02, Peter's All Muscle Genes (1 16                                
                                              01), Peter's L1 Muscle Genes (95 Con; 02-01-01), PJ No                             
                                              2 first 1500, PJRPAPER-1329 L1 Muscle Genes (Chromo V),                            
                                              PJRPAPER-1329 L1 Muscle List (genes without 1,                                     
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-L1 Muscle Genes (unknowns from 1329,                                      
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1 Muscle Genes                            
                                              (1364), PJRPAPER-xWT-specific (wrtLEV),                                            
                                              PJRPAPER-xWT-specific (wrtU29), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zU29WLev up-down,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], rasl2, Reinke et al 2004,                                
                                              list of genes in cluster order, rosetta, YK genes 95%                              
                                              different in muscle and intestin, YK Similar muscle and                            
                                              intestine genes                                                                    

C04E12.4 C04E12.4 P W All gene names: C04E12.4; CE30721; WBGene00015434; WP:CE30721
                                              
Member of lists ( lists):
                                               mount08, R=0.21, aging p < .001 (May                             
                                              2001), Aging p < .01, Aging, p<.001 aging subset,                                  
                                              GD-Chol Down, GD-U29-Sp (wrt Lev 95), GD-U29 muscle                                
                                              genes, GD-U29-Sp (wrt L1 95), Peter's Acetyl-P001                                  
                                              Superset, Peter's L2 Muscle (95 Con; 02-01-01), PJ 4212                            
                                              IntestineMuscleTtest0.05, PJRPAPER-Cholin Superset,                                
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-xU29-specific                                
                                              (wrtWT), PJRPAPER-zU29WLev down, PJRPAPER-zU29-Genes,                              
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C04E12.6 C04E12.6 P W All gene names: C04E12.6; 5D834; CE16819; WBGene00015436; WP:CE16819
                                              
Member of lists ( lists):
                                               mount06, R=0.21, GD-Chol Down,                                   
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes, JW Dauer                              
                                              Enriched by AdjDT0 vs L1T0, PJRPAPER-Cholin Superset,                              
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-L1 Muscle Genes                              
                                              (95), PJRPAPER-Muslce (L1) negative controls-2,                                    
                                              PJRPAPER-zU29WLev down, PJRPAPER-zU29-Genes, Proteome                              
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              V [May 2002], Reinke et al 2004, list of genes in                                  
                                              cluster order, rosetta                                                             

C04E12.7 C04E12.7 P W All gene names: C04E12.7; 5D836; CE16820; WBGene00015437; WP:CE16820 WormBase description: C04E12.7 encodes a homolog of human scramblase (PLSCR1; OMIM:604170), which is activated by a rise of intracellular calcium, and which promotes the exposure of phosphatidylserine on the surface of cells undergoing activation, injury, or apoptosis; closely related paralogs of C04E12.7 include T22H2.5 and ZK1053.5.
                                              
Member of lists ( lists):
                                               mount09, R=0.16, Aging p < .01, PJ                               
                                              3085 intestinal genes, PJ 3118 intestinal genes, PJ                                
                                              4746 intestinal gene Con95, PJ No10-1-R15 First 1500,                              
                                              PJ No10-1-R16 First 1500, PJRPAPER-Chromosome V Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C04E6.12 C04E6.12 P W All gene names: C04E6.12; 5G400; CE07917; WBGene00015426; WP:CE07917
                                              
Member of lists ( lists):
                                               mount14, R=0.38, PJRPAPER-Chromosome                             
                                              V Genes, PJRPAPER-Muslce (L1) negative controls-2,                                 
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C04E6.5 C04E6.5 P W All gene names: C04E6.5; 5G383; CE27053; WBGene00015422; WP:CE27053
                                              
Member of lists ( lists):
                                               mount04, R=0.41, PJ 4212                                         
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-Muscle negative controls, PJRPAPER-Muslce (L1)                            
                                              negative controls-2, PJRPAPER-Sperm Genes,                                         
                                              PJRPAPER-Ubiquitin-Related, Proteome Cell Role (Oct                                
                                              2000)- Genes of Unknown Ce, Proteome LG V [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Sperm-enriched, Valerie Reinke's 11927 genes,                             
                                              YK genes 95% different in muscle and intestin                                      

C04F1.1 C04F1.1 P W All gene names: C04F1.1; 1G304; CE17364; WBGene00015442; WP:CE17364
                                              
Member of lists ( lists):
                                               Bea ras L2 mixed 561,  bea RasL2 486                             
                                              genes, Bea L2 mixed 709, Bea Ras L2 time course (99%),                             
                                              GD-Chol "\/", GD-U29-Sp (wrt Lev 95), GD-U29 muscle                                
                                              genes, GD-U29-Sp (wrt L1 95), JW Dauer ANOVA 2430 v4,                              
                                              JW Dauer Recovery Specific 1984, JW Late 325, Peter's                              
                                              Acetyl-P001 Superset, PJRPAPER-Cholin Superset,                                    
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, PJRPAPER-xU29-specific (wrtWT),                               
                                              PJRPAPER-zU29WLev down-up, PJRPAPER-zU29-Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], rasl2, Reinke et al 2004,                                
                                              list of genes in cluster order                                                     

C04F12.3 C04F12.3 P W All gene names: ikb-1; C04F12.3; 1K263; CE19676; NM_060174; WBGene00002069; WP:CE19676 WormBase description: ikb-1 encodes an ortholog of human BCL3 (OMIM:109560) that physically interacts with the checkpoint protein MRT-2; ikb-1(nr2019) and ikb-1(nr2027) mutants display no obvious phenotype other than shortened lifespan; mutation of BCL3 is frequently associated with recurring translocations found in the neoplastic cells of patients with chronic lymphocytic leukemia, and has been implicated in cell cycle control (perhaps via apoptosis). WormBase CDS description: Ank repeat
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  bea RasL2 486 genes,  mount15, R=0.37,                                
                                              daf-2 1384 min, daf-2 1384 InAgingSetMin3ClusterA, JW                              
                                              Dauer Enriched AdjT0 vs AdjT12, L2 Hs genes 99.9,                                  
                                              Peter's L1 Muscle Genes (95 Con; 02-01-01),                                        
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-L1 Muscle Genes                              
                                              (95), Proteome Cell Role (Oct 2000)- Genes of Unknown                              
                                              Ce, Proteome LG I [May 2002], Reinke et al 2004, list                              
                                              of genes in cluster order, rosetta                                                 

C04F12.4 C04F12.4 P W All gene names: rpl-14; C04F12.4; C04F12.4.1; C04F12.4.2; 1K265; CE19677; NM_060175; WBGene00004426; WP:CE19677 WormBase description: rpl-14 encodes a large ribosomal subunit L14 protein.
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount23, R=0.53,                                 
                                              stuart layer12, Aging.p01, Bea L2 mixed 709, Bea Ras L2                            
                                              time course (99%), daf-16 (p < .001), daf-16 p<.001,                               
                                              7-01, FP 1311 similar in intestine and muscle, FP 1938                             
                                              Intestine genes, Fraser's 100% Emb (02-01-01), Fraser's                            
                                              Complete RNAi List, Fraser's Slow Growth (02-01-01),                               
                                              Fraser's Sterile (02-01-01), GD-Chol Down, GD-L1 Muscle                            
                                              Genes, GD-L1-Sp (95 TTest), GD-L2 Muscle Genes, GD-The                             
                                              Worm-Yeast in common with Muscle, GD-U29 muscle genes,                             
                                              GD-U29-Sp (wrt Lev 95), GD-WT-Sp (wrt Lev 95),                                     
                                              GDPAPER-Prelim Mixed Muscle, JW 1703 merged Peters                                 
                                              zMuscle 8-02, Neuro-1 L1 Upreg (11 20 00), Peter's                                 
                                              Acetyl-P001 Superset, Peter's All Muscle Genes (1 16                               
                                              01), Peter's Dorsal List (02-19-01), Peter's L1 Muscle                             
                                              Genes (95 Con; 02-01-01), Peter's L1-Dorsal+Excr avg                               
                                              (99.9), Peter's L2 Muscle (95 Con; 02-01-01), Peter's                              
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, Peter's                                 
                                              UP-Reg Muscle (10 25 00), PJ 836 muscle and intestine                              
                                              in common, PJ 1005I0.05M0.001, PJ 1445 M0.05I0.001, PJ                             
                                              1617  Muscle and intestine in common, PJ 1899                                      
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJ No4 first1500, PJ No8 First 1500, PJ                                     
                                              No10-1-R16 First 1500, PJ No10-1-R15 First 1500,                                   
                                              PJRPAPER-1329 L1 Muscle Genes (Chromo I), PJRPAPER-1329                            
                                              L1 Muscle List (genes without 1, PJRPAPER-Cholin                                   
                                              Superset, PJRPAPER-Chromosome I Genes, PJRPAPER-L1                                 
                                              Muscle Genes (95), PJRPAPER-L1 Muscle Genes (1364),                                
                                              PJRPAPER-Ribosome Component, PJRPAPER-xWT-specific                                 
                                              (wrtLEV), PJRPAPER-zL1 Muscle Genes, PJRPAPER-zL1vL2                               
                                              nsd, PJRPAPER-zL2 Muscle Genes, PJRPAPER-zU29WLev nsd,                             
                                              PJRPAPER-zU29-Genes, Protein expression, Proteome Cell                             
                                              Role (Oct 2000)- Protein Synthesis, Proteome Funct                                 
                                              Class (Mar 2000)-RNA-Binding Subuni, Proteome LG I [May                            
                                              2002], Proteome Localization (Oct 2000)-Cytoplasmic,                               
                                              Proteomes Ribosomal List, rasl2, Reinke et al 2004,                                
                                              list of genes in cluster order, RNA binding, wmyst, YK                             
                                              intestinal genes (p<.001), YK Similar muscle and                                   
                                              intestine genes                                                                    

C04F12.5 C04F12.5 P W All gene names: C04F12.5; 1K264; CE19678; WBGene00007299; WP:CE19678
                                              
Member of lists ( lists):
                                               mount07, R=0.43, JW SAGE mixed stage,                            
                                              Peter's Neuro (95; 06-18-01), Peter's Neuro (99;                                   
                                              06-18-01), Peter's Neuro (99.9; 06-18-01), Peter's                                 
                                              Neuro-non-musc(sp&enri;fr99.9 Superset), PJ 2378                                   
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome I Genes, PJRPAPER-Secretory                             
                                              Vesicles, Proteome Cell Role (Oct 2000)- Genes of                                  
                                              Unknown Ce, Proteome LG I [May 2002], Reinke et al                                 
                                              2004, list of genes in cluster order, YK genes 95%                                 
                                              different in muscle and intestin                                                   

C04F12.6 C04F12.6 P W All gene names: C04F12.6; 1K266; CE19679; WBGene00007300; WP:CE19679
                                              
Member of lists ( lists):
                                              Proteome Cell Role (Oct 2000)- Genes                              
                                              of Unknown Ce, Proteome LG I [May 2002], Reinke et al                              
                                              2004, list of genes in cluster order, rosetta                                      

C04F12.7 C04F12.7 P W All gene names: C04F12.7; 1K272; CE19680; WBGene00007301; WP:CE19680
                                              
Member of lists ( lists):
                                               mount04, R=0.41, FP 645 Intestine                                
                                              specific genes, FP 1311 similar in intestine and                                   
                                              muscle, FP 1938 Intestine genes, josh laura1/2 common,                             
                                              Neuro-1 L1 Upreg (11 20 00), Peter's L1 Muscle Genes                               
                                              (95 Con; 02-01-01), PJ 1899                                                        
                                              IntestineMuscleCon95incommon, PJ 4746 intestinal gene                              
                                              Con95, PJRPAPER-Chromosome I Genes, PJRPAPER-L1 Muscle                             
                                              Genes (95), PJRPAPER-Sperm Genes, Proteome Cell Role                               
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG I [May                                
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Sperm-enriched, Valerie Reinke's 11927                             
                                              genes, YK genes 95% different in muscle and intestin,                              
                                              YK intestinal genes (p<.001), YK intestine-specific                                
                                              genes                                                                              

C04F5.1 C04F5.1 P W All gene names: rsd-8; sid-1; C04F5.1; 5F603; CE30331; NM_071971; WBGene00004795; WP:CE30331 WormBase description: The sid-1 gene encodes a predicted transmembrane protein with conserved human (OMIM:606816) and mouse homologs of unknown function and is required cell autonomously for systemic RNA interference (RNAi); a SID-1::GFP fusion is enriched at the cell periphery of most nonneuronal cells from late embryogenesis through adulthood with highest levels detected in cells exposed to the environment.
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount07, R=0.43,                                 
                                              stuart layer13, Art-1-7, GD-Chol NSD/AMB, GD-GABA                                  
                                              NSD/AMB (Anova/TTest), GD-Musc muscle, GD-U29-Sp (wrt                              
                                              Lev 95), GD-U29 muscle genes, josh laura1/2 common,                                
                                              Peter's Acetyl-P001 Superset, Peter's Neuro (95;                                   
                                              06-18-01), PJ No8 First 1500, PJRPAPER-Cholin Superset,                            
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, PJRPAPER-zU29WLev nsd,                                        
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG V [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin                                                                

C04F5.7 C04F5.7 P W All gene names: ugt-63; C04F5.7; 5F584; CE19671; WBGene00015449; WP:CE19671 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists ( lists):
                                              771-Egg-99-min, Bea                                               
                                              UDP-glucuronosyltransferase, JW Dauer ANOVA 2430 v4, JW                            
                                              Dauer Recovery Specific 1984, JW Early 538, JW                                     
                                              UDP-glucoronosyltransferase, Lipid metabolism genes, PJ                            
                                              4746 intestinal gene Con95, PJ No 2 first 1500,                                    
                                              PJRPAPER-Chromosome V Genes, PJRPAPER-Lipid, fatty-acid                            
                                              and sterol metabolism, Proteome Cell Role (Oct 2000)-                              
                                              Lipid, Sterol & Fat, Proteome Funct Class (Mar                                     
                                              2000)-Transferase, Proteome LG V [May 2002], Reinke et                             
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              Valerie Reinke's 11927 genes                                                       

C04F6.3 C04F6.3 P W All gene names: cht-1; C04F6.3; C04F6.3.1; C04F6.3.2; CE03923; CHT1; NM_076187; WBGene00000503; WP:CE03923; XE16 WormBase description: cht-1 encodes a chitinase orthologous to human chitinase-1 (OMIM:600031, mutations are associated with chitotriosidase deficiency); CHT-1 is predicted to function as an extracellular O-glycosyl hydrolase that hydrolyzes the glycosidic bond between two or more carbohydrates; in C. elegans, CHT-1 may play a role in embryogenesis, and may also be required for cuticle degradation during molting and degradation of chitin-containing pathogens as part of a host defense mechanism. WormBase CDS description: glycosyl hydrolase (family 18)
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  Bea ras L2 mixed 561,  bea RasL2 486                                  
                                              genes,  mount12, R=0.29, aging p < .001 (May 2001),                                
                                              Aging p < .01, Aging, p<.001 aging subset, Bea Ras L2                              
                                              time course (99%), FP 464 Muscle specific genes,                                   
                                              GD-Chol UP, GD-L1 Muscle Genes, GD-L1-Sp (95 TTest),                               
                                              GD-L1-Sp (wrt U29 95), GD-Lev Muscle Genes, GD-Lev-Sp                              
                                              (wrt U29 95), JW 1703 merged Peters zMuscle 8-02, JW                               
                                              SAGE mixed stage, L2 Hs genes 99.9, Neuro-1 L1 Upreg                               
                                              (11 20 00), Peter's Acetyl-P001 Superset, Peter's All                              
                                              Muscle Genes (1 16 01), Peter's L1 Muscle Genes (95                                
                                              Con; 02-01-01), Peter's Lev UP unc-29 DOWN (anova+10),                             
                                              Peter's Musc-non-neuro(sp&enri;fr99.9 Superset), Peters                            
                                              L1-Specific, PJ 82 Muscle-sepcific, PJ 2378                                        
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-1329 L1 Muscle List                             
                                              (genes without 1, PJRPAPER-1329 L1 Muscle Genes (Chromo                            
                                              X), PJRPAPER-Cholin Superset, PJRPAPER-Chromosome X                                
                                              Genes, PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1                                  
                                              Muscle Genes (1364), PJRPAPER-Muslce (L1) negative                                 
                                              controls-2, PJRPAPER-xWT-specific (wrtU29),                                        
                                              PJRPAPER-zL1 Muscle Genes, PJRPAPER-zL1-Specific Genes,                            
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev up, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              X [May 2002], rasl2, Reinke et al 2004, list of genes                              
                                              in cluster order, rosetta, YK genes 95% different in                               
                                              muscle and intestin, YK muscle-specific genes                                      

C04G2.10 C04G2.10 P W All gene names: C04G2.10; 4K881; CE05218; WBGene00007309; WP:CE05218
                                              
Member of lists ( lists):
                                               mount04, R=0.41, josh laura1/2                                   
                                              common, PJ No 2 first 1500, PJRPAPER-Chromosome IV                                 
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C04G2.2 C04G2.2 P W All gene names: C04G2.2; 4K855; CE05212; WBGene00007305; WP:CE05212 WormBase description: serine/threonine kinase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Aging p < .01,                                  
                                              Aging.p01, GDPAPER-Prelim Mixed Muscle, male99,                                    
                                              Male-enriched, Peter's All Muscle Genes (1 16 01), PJ                              
                                              4746 intestinal gene Con95, PJRPAPER-Casein Kinases,                               
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-Male Genes,                                 
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Serine/Threonine Kinases, PJRPAPER-Sperm                                  
                                              Genes, Protein kinases, Proteome Cell Role (Oct 2000)-                             
                                              Signal Transduction, Proteome Funct Class (Mar                                     
                                              2000)-Protein Kinase, Proteome LG IV [May 2002], Reinke                            
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

C04G2.4 C04G2.4 P W All gene names: msp-36; C04G2.4; 4K861; NM_069433; WBGene00003432 WormBase description: msp-36 encodes a protein that belongs to a family of proteins called the Major Sperm Proteins (MSPs) that is conserved in nematodes; this family comprises of closely related, small, basic proteins that make up 15% of sperm protein; this multigene family consists of over fifty genes, including many pseudogenes; MSP is involved in both extracellular signaling and cytoskeletal functions during reproduction-MSP antagonizes Eph/ephrin signaling, in part, by binding VAB-1 Eph receptor tyrosine kinase on oocytes and sheath cells to promote oocyte maturation and MAPK activation; MSP assembles into fibrous networks that drives movement of the C. elegans sperm; msp genes are expressed only in late primary spermatocytes. WormBase CDS description: major sperm protein
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount04, R=0.41, Cell                            
                                              Structure, Highly regulated #2, josh laura1/2 common,                              
                                              male99, Male-enriched, MSP genes, PJ 3085 intestinal                               
                                              genes, PJ 3118 intestinal genes, PJ 4746 intestinal                                
                                              gene Con95, PJ No8 First 1500, PJ No10-1-R15 First                                 
                                              1500, PJ No10-1-R16 First 1500, PJRPAPER-Chromosome IV                             
                                              Genes, PJRPAPER-Male Genes, PJRPAPER-Muslce (L1)                                   
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Cell Structure, Proteome Funct Class (Mar                                          
                                              2000)-Structural Protein, Proteome LG IV [May 2002],                               
                                              Proteome Localization (Oct 2000)-Cytoplasmic, Reinke et                            
                                              al 2004, list of genes in cluster order                                            

C04G2.5 C04G2.5 P W All gene names: C04G2.5; 4K858; CE05213; WBGene00007306; WP:CE05213
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Art-1-7, male99,                                
                                              Male-enriched, PJ No5 first 1500, PJRPAPER-Chromosome                              
                                              IV Genes, PJRPAPER-Male Genes, PJRPAPER-Muslce (L1)                                
                                              negative controls-2, PJRPAPER-Sperm Genes, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              IV [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Sperm-enriched, Valerie                                    
                                              Reinke's 11927 genes                                                               

C04G2.9 C04G2.9 P W All gene names: C04G2.9; 4K879; CE05217; WBGene00007308; WP:CE05217
                                              
Member of lists ( lists):
                                               mount04, R=0.41, josh laura1/2                                   
                                              common, male99, Male-enriched, PJ                                                  
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No10-1-R15 First 1500, PJ No10-1-R16 First                               
                                              1500, PJRPAPER-Chromosome IV Genes, PJRPAPER-Male                                  
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

C04H5.1 C04H5.1 P W All gene names: C04H5.1; 2O821; CE15587; WBGene00007312; WP:CE15587
                                              
Member of lists ( lists):
                                               mount02, R=0.15,  stuart layer13,                                
                                              GD-GABA NSD/AMB (Anova/TTest), GD-Musc muscle, GD-U25                              
                                              muscle, Peter's L1 Muscle Genes (95 Con; 02-01-01),                                
                                              Peter's Muscle-Neuro Ubiq (99.9 Superset list), Peter's                            
                                              Neuro (95; 06-18-01), Peter's Neuro (99; 06-18-01),                                
                                              Peter's Neuro (99.9; 06-18-01), PJRPAPER-Chromosome II                             
                                              Genes, PJRPAPER-L1 Muscle Genes (95), Proteome Cell                                
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG II                               
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C05A9.1 C05A9.1 P W All gene names: pgp-5; C05A9.1; CE05221; NM_077409; WBGene00003999; WP:CE05221; XL474 WormBase description: pgp-5 encodes a transmembrane protein that is a member of the P-glycoprotein subclass of the ATP-binding cassette (ABC) transporter superfamily; by homology, PGP-5 is predicted to function as an ATP-dependent efflux pump that protects C. elegans by exporting exogenous toxins; however, as loss of pgp-5 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of PGP-5 in C. elegans development and/or behavior is not yet known. WormBase CDS description: p-glycoprotein
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount21, R=0.30,                                 
                                              ATPases, PJ 2378 IntestineMusclettest0.01, PJ 4212                                 
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome X Genes,                             
                                              PJRPAPER-Mutidrug Resistance, Proteome Cell Role (Oct                              
                                              2000)- Small Molecule Tran, Proteome Funct Class (Mar                              
                                              2000)-Active Transporter, Proteome Funct Class (Mar                                
                                              2000)-Transporter, Proteome Funct Class (Mar                                       
                                              2000)-ATPase, Proteome Funct Class (Mar                                            
                                              2000)-Hydrolase, Proteome LG X [May 2002], Proteome                                
                                              Localization (Oct 2000)-Unspecified membr, Reinke et al                            
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, wmyst, YK genes 95% different in                             
                                              muscle and intestin                                                                

C05B10.1 C05B10.1 P W All gene names: lip-1; C05B10.1; 4H607; CE31151; NM_068652; WBGene00003043; WP:CE31151 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists ( lists):
                                               mount11, R=0.38, GD-Chol NSD/AMB,                                
                                              GD-U29 muscle genes, GD-U29-Sp (wrt L1 95),                                        
                                              Oocyte-enriched, Peter's Acetyl-P001 Superset, Peter's                             
                                              L2 Muscle (95 Con; 02-01-01), PJ 4212                                              
                                              IntestineMuscleTtest0.05, PJ No 2 first 1500,                                      
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-Oocyte Genes, PJRPAPER-xU29-specific (wrtWT),                             
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes, Protein                                
                                              phosphatases, Proteome Cell Role (Oct 2000)- Protein                               
                                              Modificatio, Proteome Funct Class (Mar 2000)-Protein                               
                                              Phosphotas, Proteome Funct Class (Mar 2000)-Hydrolase,                             
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C05B5.2 C05B5.2 P W All gene names: C05B5.2; 3L90; CE00878; WBGene00007320; WP:CE00878
                                              
Member of lists ( lists):
                                               mount04, R=0.41, age-1 216 min, age-1                            
                                              216InAgingSetMin3ClusterC, josh laura1/2 common, JW                                
                                              SAGE mixed stage, PJ 1158IntestineMuscleTTEST0.001, PJ                             
                                              1235 intestine-sepcific, PJ 2378                                                   
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No10-1-R15 First 1500, PJ No10-1-R16 First                               
                                              1500, PJ No 2 first 1500, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG III [May 2002], Reinke                            
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

C05C10.4 C05C10.4 P W All gene names: C05C10.4; 2K223; CE17370; WBGene00007331; WP:CE17370 WormBase description: acid phosphatase
                                              
Member of lists ( lists):
                                               mount08, R=0.21, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, daf-2 1384 min, daf-2 1384                               
                                              InAgingSetMin3ClusterA, daf-16 min, GDPAPER-Prelim                                 
                                              Mixed Muscle, Highly regulated #2, josh laura1/2                                   
                                              common, McElwee 35, Peter's All Muscle Genes (1 16 01),                            
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's UP-Reg                               
                                              Muscle (10 25 00), PJ 1235 intestine-sepcific, PJ 2378                             
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome II Genes, PJRPAPER-Other                                
                                              Phosphotases, Proteome Cell Role (Oct 2000)- Genes of                              
                                              Unknown Ce, Proteome Funct Class (Mar 2000)-Hydrolase,                             
                                              Proteome Funct Class (Mar 2000)-Other Phosphotases,                                
                                              Proteome LG II [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C05C10.5 C05C10.5 P W All gene names: C05C10.5; C05C10.5c.1; C05C10.5c.2; C05C10.5c.3; 2K235; CE01469; CE35822; CE39217; WBGene00007332; WP:CE01469; WP:CE35822; WP:CE39217
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              Aging.p01, Germ line-enriched, JW SAGE mixed stage,                                
                                              operon first genes, PJ 1158IntestineMuscleTTEST0.001,                              
                                              PJ 1235 intestine-sepcific, PJ 2378                                                
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome II Genes, PJRPAPER-Muslce                               
                                              (L1) negative controls-2, Proteome Cell Role (Oct                                  
                                              2000)- Genes of Unknown Ce, Proteome LG II [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C05C12.1 C05C12.1 P W All gene names: C05C12.1; 4M19; CE02965; WBGene00007335; WP:CE02965 WormBase description: serine/threonine kinase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, JW SAGE mixed stage,                            
                                              male99, Male-enriched, PJ 3085 intestinal genes, PJ                                
                                              3118 intestinal genes, PJ 4746 intestinal gene Con95,                              
                                              Protein kinases, Proteome Cell Role (Oct 2000)- Protein                            
                                              Modificatio, Proteome Cell Role (Oct 2000)- Signal                                 
                                              Transduction, Proteome Funct Class (Mar                                            
                                              2000)-Transferase, Proteome Funct Class (Mar                                       
                                              2000)-Protein Kinase, Proteome LG IV [May 2002], Reinke                            
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

C05C12.4 C05C12.4 P W All gene names: C05C12.4; 4M12; CE39218; WBGene00007336; WP:CE39218
                                              
Member of lists ( lists):
                                               mount08, R=0.21, FP 1938 Intestine                               
                                              genes, GD-Chol "\/", GD-U29 muscle genes, GD-U29-Sp                                
                                              (wrt Lev 95), GD-U29-Sp (wrt L1 95), josh laura1/2                                 
                                              common, Peter's Acetyl-P001 Superset, Peter's Dorsal                               
                                              List (02-19-01), Peter's Excretory-Specific (p<0.05),                              
                                              Peter's Excretory-SPecific med rank (95), Peter's                                  
                                              L1-Dorsal+Excr avg (99.9), Peter's L2 Muscle (95 Con;                              
                                              02-01-01), PJ 1158IntestineMuscleTTEST0.001, PJ 1235                               
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No4 first1500, PJRPAPER-Cholin Superset,                                 
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-xU29-specific                               
                                              (wrtWT), PJRPAPER-zU29WLev down-up,                                                
                                              PJRPAPER-zU29-Genes, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK intestinal genes                                  
                                              (p<.001), YK Similar muscle and intestine genes                                    

C05C12.5 C05C12.5 P W All gene names: C05C12.5; 4M24; CE02968; WBGene00007337; WP:CE02968
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Aging p < .01,                                  
                                              Aging.p01, josh laura1/2 common, male99, Male-enriched,                            
                                              PJ 1235 intestine-sepcific, PJ 2378                                                
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome IV Genes, PJRPAPER-Male                                 
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

C05C8.1 C05C8.1 P W All gene names: C05C8.1; 5H721; CE29480; WBGene00015460; WP:CE29480
                                              
Member of lists ( lists):
                                              operon first genes, Proteome LG V [May                            
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order                                                                              

C05C8.3 C05C8.3 P W All gene names: dao-1; fkb-3; C05C8.3; 5H707; CE07921; NM_072434; WBGene00001428; WP:CE07921 WormBase description: fkb-3 encodes a peptidylprolyl cis/trans isomerase homologous to mammalian FK506 immunosuppressant-binding protein 9; FKB-3 expression is positively regulated by signaling through the DAF-2 insulin receptor-like pathway and the activity of the DAF-16 fork-head transcription factor suggesting that FKB-3 could play a role in metabolism and longevity; however, as loss of FKB-3 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of FKB-3 in C. elegans development and/or behavior is not yet known; FKB-3 contains a predicted endoplasmic reticulum (ER) retention sequence and is thus proposed to localize to the ER. WormBase CDS description: FKBP-binding protein
                                              
Member of lists ( lists):
                                               mount14, R=0.38, daf-2 1384 min,                                 
                                              daf-2 1384 InAgingSetMin3ClusterA, JW Climbing 386, JW                             
                                              Dauer ANOVA 2430 v4, JW Dauer Recovery Specific 1984,                              
                                              Peter's Dorsal List (02-19-01), Peter's L1-Dorsal+Excr                             
                                              avg (99.9), PJ 3085 intestinal genes, PJ 3118                                      
                                              intestinal genes, PJ 4746 intestinal gene Con95, PJ No4                            
                                              first1500, PJ No10-1-R15 First 1500, PJ No10-1-R16                                 
                                              First 1500, PJRPAPER-Chromosome V Genes, Proteome Cell                             
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome Funct                               
                                              Class (Mar 2000)-Isomerase, Proteome LG V [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C05C8.4 C05C8.4 P W All gene names: gei-6; C05C8.4; 5H708; CE07922; NM_072435; WBGene00001563; WP:CE07922
                                              
Member of lists ( lists):
                                               mount09, R=0.16, PJ 2378                                         
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome V Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C05C8.5 C05C8.5 P W All gene names: C05C8.5; 5H714; CE07923; WBGene00015462; WP:CE07923
                                              
Member of lists ( lists):
                                               mount02, R=0.15, PJ 2378                                         
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome V Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C05C8.6 C05C8.6 P W All gene names: C05C8.6; 5H716; CE07924; WBGene00015463; WP:CE07924
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, Germ                                   
                                              line-enriched, josh laura1/2 common, operon first                                  
                                              genes, PJ 1158IntestineMuscleTTEST0.001, PJ 2378                                   
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome V Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG V [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C05C8.7 C05C8.7 P W All gene names: phi-49; C05C8.7; C05C8.7.1; C05C8.7.2; C05C8.7.3; C05C8.7.4; 5H724; CE07925; WBGene00015464; WP:CE07925 WormBase description: mannose-6-phosphate isomerase
                                              
Member of lists ( lists):
                                               mount24, R=0.37,  stuart layer12, Bea                            
                                              L2 mixed 709, Biosynthesis, Carbohydrate metabolism,                               
                                              GD-Chol NSD/AMB, GD-U29 muscle genes, GD-U29-Sp (wrt L1                            
                                              95), JW Climbing 386, JW Dauer ANOVA 2430 v4, JW Dauer                             
                                              Recovery Specific 1984, Peter's Acetyl-P001 Superset,                              
                                              Peter's Dorsal List (02-19-01), Peter's                                            
                                              Excretory-Specific (p<0.05), Peter's L1-Dorsal+Excr avg                            
                                              (99.9), Peter's L1 Muscle Genes (95 Con; 02-01-01),                                
                                              Peter's Neuro (95; 06-18-01), Peter's Neuro (99;                                   
                                              06-18-01), PJRPAPER-Carbohydrate Metabolism,                                       
                                              PJRPAPER-Carbohydrate Metabolism (no mito gen,                                     
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-xU29-specific                              
                                              (wrtWT), PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes,                               
                                              Proteome Cell Role (Oct 2000)- Carbohydrate Metabo,                                
                                              Proteome Funct Class (Mar 2000)-Isomerase, Proteome LG                             
                                              V [May 2002], Proteome Localization (Oct                                           
                                              2000)-Cytoplasmic, Reinke et al 2004, list of genes in                             
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              wmyst                                                                              

C05C9.1 C05C9.1 P W All gene names: C05C9.1; CE33968; WBGene00007325; WP:CE33968; XL779 WormBase description: LBP / BPI / CETP family
                                              
Member of lists ( lists):
                                               mount14, R=0.38, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, age-1                                                    
                                              216InAgingSetMin3ClusterD, age-1 216 min,                                          
                                              PJRPAPER-Chromosome X Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG X [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin                                                                

C05D11.2 C05D11.2 P W All gene names: tag-171; vps-16; C05D11.2; C05D11.2.1; C05D11.2.2; 3H525; CE24785; WBGene00006516; WP:CE24785
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount02, R=0.15, PJ                              
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome III                                  
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG III [May 2002], Reinke et al 2004, list                            
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes, YK genes 95% different in muscle and                                  
                                              intestin                                                                           

C05D11.3 C05D11.3 P W All gene names: tag-170; C05D11.3; 3H521; CE01133; WBGene00006515; WBGene00015482; WP:CE01133
                                              
Member of lists ( lists):
                                               mount18, R=0.38,  stuart layer13,                                
                                              daf-16 p<.001, 7-01, daf-16 (p < .001), FP 1938                                    
                                              Intestine genes, GD-Chol Down, GD-GABA NSD/AMB                                     
                                              (Anova/TTest), GD-L2 Muscle Genes, GD-U25 muscle,                                  
                                              GD-U29 muscle genes, GD-U29-Sp (wrt Lev 95), JW 1703                               
                                              merged Peters zMuscle 8-02, operon first genes, Peter's                            
                                              Acetyl-P001 Superset, Peter's All Muscle Genes (1 16                               
                                              01), Peter's L2 Muscle (95 Con; 02-01-01), Peter's                                 
                                              Neuro (95; 06-18-01), Peter's Neuro (99; 06-18-01), PJ                             
                                              4746 intestinal gene Con95, PJ No10-1-R16 First 1500,                              
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                             
                                              PJRPAPER-zU29WLev down, PJRPAPER-zU29-Genes,                                       
                                              PJRPAPERz-L2 Clustered (inc Operons not Paral,                                     
                                              PJRPAPERz-L2 Clustered(without Paralogues wit, Proteome                            
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              III [May 2002], Reinke et al 2004, list of genes in                                
                                              cluster order, YK intestinal genes (p<.001)                                        

C05D11.6 C05D11.6 P W All gene names: nas-4; C05D11.6; 3H498; CE37080; NM_066004; WBGene00003523; WP:CE37080 WormBase description: nas-4 encodes a predicted extracellular matrix metalloprotease of the M12A (astacin) family that contains an N-terminal signal sequence and a catalytic domain, but no recognizable regulatory domains in the C-terminus; as loss of nas-4 activity via RNAi results in no obvious abnormalities, the precise role of NAS-4 in C. elegans development and/or behavior is not yet known; however, an NAS-4 translational reporter is expressed in the pharynx and intestine in larvae and adults, suggesting a role for NAS-4 in digestion; NAS-4 is specifically detected within cells of the pharyngeal procorpus, metacorpus, isthmus, and terminal bulb, with extracellular expression detected in the lumen of the terminal bulb and in the gut. WormBase CDS description: zinc metalloprotease
                                              
Member of lists ( lists):
                                               mount14, R=0.38, GD-Chol "\/", GD-Lev                            
                                              Muscle Genes, GD-Lev-Sp (wrt wt 95), JW Dauer ANOVA                                
                                              2430 v4, JW Dauer Recovery Specific 1984, JW Late 325,                             
                                              Peter's Acetyl-P001 Superset, PJRPAPER-Cholin Superset,                            
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-Muslce (L1)                                
                                              negative controls-2, PJRPAPER-xLEV-specific (wrtWT),                               
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev down-up,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C05D11.7 C05D11.7 P W All gene names: C05D11.7; C05D11.7a.1; C05D11.7a.2; 3H506; CE29663; CE30480; WBGene00015484; WP:CE29663; WP:CE30480
                                              
Member of lists ( lists):
                                               mount05, R=0.22, JW Dauer Enriched                               
                                              AdjT0 vs AdjT12, Peter's L1 Muscle Genes (95 Con;                                  
                                              02-01-01), PJRPAPER-Chromosome III Genes, PJRPAPER-L1                              
                                              Muscle Genes (95), Proteome Cell Role (Oct 2000)- Genes                            
                                              of Unknown Ce, Proteome LG III [May 2002], Reinke et al                            
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

C05D12.1 C05D12.1 P W All gene names: C05D12.1; 2L702; CE36973; WBGene00007339; WP:CE36973
                                              
Member of lists ( lists):
                                               mount01, R=0.15, PJRPAPER-Chromosome                             
                                              II Genes, Proteome Cell Role (Oct 2000)- Genes of                                  
                                              Unknown Ce, Proteome LG II [May 2002], Reinke et al                                
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

C05D2.3 C05D2.3 P W All gene names: C05D2.3; 3G707; CE29022; WBGene00015467; WP:CE29022 WormBase description: C05D2.3 generally resembles aromatic-L-amino-acid/L-histidine decarboxylases; however, its predicted protein sequence lacks six residues critical for AADC function; C05D2.3 is dispensable in mass RNAi assays. WormBase CDS description: aromatic-L-amino-acid decarboxylase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Amino acid                                      
                                              metabolism genes, Biosynthesis, PJ                                                 
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Amino Acid Metabolism,                                             
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-Muscle negative                            
                                              controls, PJRPAPER-Muslce (L1) negative controls-2,                                
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Amino Acid Metaboli, Proteome Funct Class (Mar                                     
                                              2000)-Lyase, Proteome LG III [May 2002], Proteome                                  
                                              Localization (Oct 2000)-Cytoplasmic, Reinke et al 2004,                            
                                              list of genes in cluster order, rosetta,                                           
                                              Sperm-enriched, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

C05D2.4 C05D2.4 P W All gene names: bas-1; C05D2.4; 3G703; CE01141; CE37081; WBGene00000239; WP:CE01141; WP:CE37081 WormBase description: bas-1 encodes a serotonin- and dopamine-synthetic aromatic amino acid decarboxylase (AAADC) that is required for the synthesis of serotonin from 5-hydroxytryptophan in vivo; mutations of bas-1 impair the turning step in male mating, the migration of AVM, SDQR, ALM, and BDU neurons during development. WormBase CDS description: aromatic-L-amino-acid decarboxylase
                                              
Member of lists ( lists):
                                              703 InParaquatMin 109, 1214-L2-99-min,                            
                                               mount09, R=0.16, age1-216daf2-1384All In age1daf2                                 
                                              modif 703 mi, Amino acid metabolism genes,                                         
                                              Biosynthesis, daf-2 1384 min, daf-2 1384                                           
                                              InAgingSetMin3ClusterA, FP 645 Intestine specific                                  
                                              genes, FP 1938 Intestine genes, GDPAPER-Prelim Mixed                               
                                              Muscle, JW Common Kinetics 446 v3, JW Dauer ANOVA 2430                             
                                              v4, JW SAGE mixed stage, Peter's All Muscle Genes (1 16                            
                                              01), Peter's UP-Reg Muscle (10 25 00), PJRPAPER-Amino                              
                                              Acid Metabolism, PJRPAPER-Chromosome III Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Amino Acid Metaboli,                                
                                              Proteome Funct Class (Mar 2000)-Lyase, Proteome LG III                             
                                              [May 2002], Proteome Localization (Oct                                             
                                              2000)-Cytoplasmic, Reinke et al 2004, list of genes in                             
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              YK genes 95% different in muscle and intestin, YK                                  
                                              intestinal genes (p<.001), YK intestine-specific genes                             

C05D2.5 C05D2.5 P W All gene names: gak-1; C05D2.5; 3G695; CE26863; NM_065806; WBGene00001514; WP:CE26863 WormBase description: gak-1 encodes a protein that contains an AT hook motif, a DNA-binding domain that shows a preference for binding stretches of A/T base pairs; GAK-1 appears to play a role in meiotic chromosome segregation, as overexpression results in post-prophase I chromosome segregation abnormalities, and a corresponding increase in embryonic lethality and the proportion of genotypically XO males in an otherwise self-fertile, XX hermaphrodite population; loss of gak-1 function via RNA-mediated interference (RNAi) results in sterility in the injected hermaphrodites, suggesting a possible role in germline development as well; gak-1 expression is enhanced in the germline, although its precise subcellular localization has not been reported.
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount07, R=0.43,                                 
                                              stuart layer13, Art-1-7, Germ line-enriched, josh                                  
                                              laura1/2 common, JW Dauer Enriched by AdjDT0 vs L1T0,                              
                                              Meiosis, PJ 1158IntestineMuscleTTEST0.001, PJ 1235                                 
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No10-1-R16 First 1500, PJRPAPER-Chromosome                               
                                              III Genes, Proteome Cell Role (Oct 2000)- Genes of                                 
                                              Unknown Ce, Proteome LG III [May 2002], Reinke et al                               
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

C05E11.5 C05E11.5 P W All gene names: amt-4; C05E11.5; CE27655; NM_076382; WBGene00000136; WP:CE27655; XF187 WormBase description: amt-4 encodes a member of the ammonium transporter protein family. WormBase CDS description: ammonium transporter
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2), JW Dauer ANOVA 2430 v4, JW Dauer Recovery                              
                                              Specific 1984, JW Early 538, L2 Hs genes 99.9, PJ 4212                             
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome X Genes,                             
                                              Proteome Cell Role (Oct 2000)- Small Molecule Tran,                                
                                              Proteome Funct Class (Mar 2000)-Active Transporter,                                
                                              Proteome Funct Class (Mar 2000)-Transporter, Proteome                              
                                              LG X [May 2002], Proteome Localization (Oct                                        
                                              2000)-Unspecified membr, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, wmyst, YK genes 95% different in muscle and                                 
                                              intestin                                                                           

C05E11.7 C05E11.7 P W All gene names: C05E11.7; CE03937; WBGene00015496; WP:CE03937; XF198
                                              
Member of lists ( lists):
                                               mount00, R=0.11, Proteome Cell Role                              
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG X [May                                
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C05E4.1 C05E4.1 P W All gene names: pes-21; C05E4.1; 5B243; CE07935; NM_070917; WBGene00005643; WP:CE07935 WormBase description: srp-2 encodes an ovalbumin-like serpin (ov-serpin) member of the serine protease inhibitor superfamily that is orthologous to human NEUROSERPIN (OMIM:602445, mutated in familial encephalopathy with neuroserpin inclusion bodies); SRP-2 is predicted to function as a suicide substrate that inhibits the proteolytic activity of serine proteases, and in vitro, recombinant SRP-2 is able to inhibit granzyme B activity; however, as loss of srp-2 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of SRP-2 in C. elegans development and/or behavior is not yet known; srp-2 expression is detected in hypodermal cells, particularly in the lateral seam cells. WormBase CDS description: serine protease inhibitor
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount08, R=0.21, PJ                              
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No 2 first 1500, PJRPAPER-Chromosome V Genes,                            
                                              PJRPAPER-Protein Degradation, Proteases, Proteome Cell                             
                                              Role (Oct 2000)- Protein Degradation, Proteome Funct                               
                                              Class (Mar 2000)-Inhibitor or Repre, Proteome LG V [May                            
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C06A1.1 C06A1.1 P W All gene names: cdc-48.1; phi-31; C06A1.1; 2K850; CE02114; NM_063872; WBGene00007352; WP:CE02114 WormBase description: transitional endoplasmic reticulum ATPase homolog 1 (P97 protein)
                                              
Member of lists ( lists):
                                               stuart layer9, ATPases, Cell cycle                               
                                              genes, Peter's UP-Reg Muscle (10 25 00), PJRPAPER-Cell                             
                                              Cycle Genes, PJRPAPER-Chromosome II Genes,                                         
                                              PJRPAPER-Protein Degradation, Protein expression,                                  
                                              Proteome Cell Role (Oct 2000)- Protein Degradation,                                
                                              Proteome Cell Role (Oct 2000)- Cell Cycle Control,                                 
                                              Proteome Funct Class (Mar 2000)-Proteosome Subunit,                                
                                              Proteome Funct Class (Mar 2000)-ATPase, Proteome Funct                             
                                              Class (Mar 2000)-Hydrolase, Proteome LG II [May 2002],                             
                                              Proteome Localization (Oct 2000)-Nuclear, Reinke et al                             
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, wmyst                                                        

C06A1.3 C06A1.3 P W All gene names: C06A1.3; 2K863; CE02116; WBGene00007354; WP:CE02116 WormBase description: serine/threonine protein phosphatase
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount04, R=0.41,                                 
                                              male99, Male-enriched, PJ 4746 intestinal gene Con95,                              
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Male Genes,                                 
                                              PJRPAPER-Protein Phosphotases, PJRPAPER-Sperm Genes,                               
                                              Protein phosphatases, Proteome Cell Role (Oct 2000)-                               
                                              Protein Modificatio, Proteome Funct Class (Mar                                     
                                              2000)-Protein Phosphotas, Proteome Funct Class (Mar                                
                                              2000)-Hydrolase, Proteome LG II [May 2002], Reinke et                              
                                              al 2004, list of genes in cluster order, rosetta,                                  
                                              Sperm-enriched, Valerie Reinke's 11927 genes, wmyst                                

C06A1.4 C06A1.4 P W All gene names: C06A1.4; 2K866; WBGene00014667
                                              
Member of lists ( lists):
                                              Proteome LG II [May 2002], Reinke et                              
                                              al 2004, list of genes in cluster order                                            

C06A5.1 C06A5.1 P W All gene names: C06A5.1; 1G597; CE07948; WBGene00015499; WP:CE07948
                                              
Member of lists ( lists):
                                               mount11, R=0.38, Fraser's 100% Emb                               
                                              (02-01-01), Fraser's Complete RNAi List, Fraser's                                  
                                              Morphological Defects (02-01-01), Fraser's Pvl                                     
                                              (02-01-01), operon first genes, Peter's Neuro (95;                                 
                                              06-18-01), Peter's Neuro (99; 06-18-01), Peter's Neuro                             
                                              (99.9; 06-18-01), Peter's Neuro-non-musc(sp&enri;fr99.9                            
                                              Superset), PJRPAPER-Chromosome I Genes, PJRPAPER-Muslce                            
                                              (L1) negative controls-2, Proteome Cell Role (Oct                                  
                                              2000)- Genes of Unknown Ce, Proteome LG I [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C06A5.10 C06A5.10 P W All gene names: C06A5.10; CE07957; WBGene00015506; WP:CE07957
                                              
Member of lists ( lists):
                                              Proteome Cell Role (Oct 2000)- Genes                              
                                              of Unknown Ce, Proteome LG I [May 2002], Reinke et al                              
                                              2004, list of genes in cluster order                                               

C06A5.6 C06A5.6 P W All gene names: C06A5.6; 1G560; CE07953; WBGene00015504; WP:CE07953
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, josh                                   
                                              laura1/2 common, PJ 2378 IntestineMusclettest0.01, PJ                              
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Chromosome I Genes, PJRPAPER-Muslce                                
                                              (L1) negative controls-2, Proteome Cell Role (Oct                                  
                                              2000)- Genes of Unknown Ce, Proteome LG I [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C06A5.8 C06A5.8 P W All gene names: C06A5.8; 1G584; CE07955; CE33360; WBGene00015505; WP:CE07955; WP:CE33360
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, josh                                   
                                              laura1/2 common, JW SAGE mixed stage, Peter's L1 Muscle                            
                                              Genes (95 Con; 02-01-01), PJRPAPER-Chromosome I Genes,                             
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-Muslce (L1)                                
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG I [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin                                                                

C06A5.9 C06A5.9 P W All gene names: rnf-1; tag-54; C06A5.9; 1G586; CE34249; NM_059337; WBGene00004380; WP:CE34249
                                              
Member of lists ( lists):
                                               mount07, R=0.43, Art-1-7, josh                                   
                                              laura1/2 common, PJRPAPER-Chromosome I Genes,                                      
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG I                                
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C06A6.3 C06A6.3 P W All gene names: C06A6.3; 4I599; CE03941; WBGene00015508; WP:CE03941
                                              
Member of lists ( lists):
                                               mount11, R=0.38, GD-Chol Down,                                   
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes, Peter's                               
                                              Acetyl-P001 Superset, Peter's L1 Muscle Genes (95 Con;                             
                                              02-01-01), PJ No5 first 1500, PJRPAPER-Cholin Superset,                            
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-L1 Muscle Genes                             
                                              (95), PJRPAPER-zU29WLev down, PJRPAPER-zU29-Genes,                                 
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C06A6.5 C06A6.5 P W All gene names: C06A6.5; 4I598; CE27661; WBGene00015510; WP:CE27661
                                              
Member of lists ( lists):
                                               mount14, R=0.38, Proteome Cell Role                              
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG IV [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C06A8.1 C06A8.1 P W All gene names: C06A8.1; C06A8.1a.1; C06A8.1a.2; 2I64; CE30593; CE31291; WBGene00015512; WP:CE30593; WP:CE31291 WormBase description: C06A8.1 is orthologous to human MSH HOMEO BOX HOMOLOG 1 (MTHFR; OMIM:142983, mutated in homocystinuria).
                                              
Member of lists ( lists):
                                               mount05, R=0.22, Amino acid                                      
                                              metabolism genes, Biosynthesis, JW AdjD T0 vs L1 T0                                
                                              short 254, JW Climbing 386, JW Dauer ANOVA 2430 v4, JW                             
                                              Dauer Enriched by AdjDT0 vs L1T0, JW Dauer Recovery                                
                                              Specific 1984, Mitochondrial, PJ                                                   
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRGDPAPER-Yeast Mito (All)-Worm Homologues,                                
                                              PJRGDPAPER-Yeast Mito (Prokaryotic)-Worm Homo,                                     
                                              PJRPAPER-Amino Acid Metabolism, PJRPAPER-Chromosome II                             
                                              Genes, PJRPAPER-Mitochondrial, PJRPAPER-Oxidoreductase,                            
                                              Proteome Cell Role (Oct 2000)- Amino Acid Metaboli,                                
                                              Proteome Funct Class (Mar 2000)-Oxidoreductases,                                   
                                              Proteome LG II [May 2002], Proteome Localization (Oct                              
                                              2000)-Mitochondrial, Proteome Subcellular Localization                             
                                              - Mitochond, Reinke et al 2004, list of genes in                                   
                                              cluster order, rosetta, sir2.1ok434 283 min,                                       
                                              sir2.1--ok434all 558 min, Valerie Reinke's 11927 genes,                            
                                              wmyst, YK genes 95% different in muscle and intestin                               

C06A8.2 C06A8.2 P W All gene names: C06A8.2; 2I70; CE31292; WBGene00015513; WP:CE31292
                                              
Member of lists ( lists):
                                               mount11, R=0.38, PJ No8 First 1500,                              
                                              PJRPAPER-Chromosome II Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG II [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C06A8.4 C06A8.4 P W All gene names: skr-17; C06A8.4; 2I75; CE02455; NM_063237; WBGene00004823; WP:CE02455 WormBase description: skr-17 encodes a homolog of Skp1 in S. cerevisiae, a core component of the SCF (Skp1p, Cullin, F-box) ubiquitin-ligase complex that facilitates ubiquitin-mediated protein degradation; SKR-17 has no known function in vivo, since skr-17(RNAi) animals are at least superficially normal, and SKR-17 does not appear to interact in vitro with any of the C. elegans cullin homologs.
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount07, R=0.43,                                 
                                              daf-16 p<.001, 7-01, FP 1311 similar in intestine and                              
                                              muscle, FP 1938 Intestine genes, GD-Chol NSD/AMB,                                  
                                              GD-Lev Muscle Genes, Germ line-enriched, josh laura1/2                             
                                              common, Peter's Acetyl-P001 Superset, Peter's L1 Muscle                            
                                              Genes (95 Con; 02-01-01), PJ 1445 M0.05I0.001, PJ 1617                             
                                              Muscle and intestine in common, PJ 1899                                            
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome II                            
                                              Genes, PJRPAPER-L1 Muscle Genes (95),                                              
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev nsd, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              II [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Valerie Reinke's 11927 genes                               

C06A8.6 C06A8.6 P W All gene names: C06A8.6; 2I63; CE02457; WBGene00015516; WP:CE02457
                                              
Member of lists ( lists):
                                               mount04, R=0.41, josh laura1/2                                   
                                              common, Male-enriched, PJ                                                          
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome II Genes,                            
                                              PJRPAPER-Muscle negative controls, PJRPAPER-Muslce (L1)                            
                                              negative controls-2, PJRPAPER-Sperm Genes, Proteome                                
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              II [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Sperm-enriched, Valerie                                    
                                              Reinke's 11927 genes, wmyst, YK genes 95% different in                             
                                              muscle and intestin                                                                

C06B8.8 C06B8.8 P W All gene names: rpl-38; C06B8.8; C06B8.8.1; C06B8.8.2; 5P991; CE20485; NM_074459; WBGene00004452; WP:CE20485 WormBase description: rpl-38 encodes a large ribosomal subunit L38 protein.
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  Bea ras L2 mixed 561,  bea RasL2 486                                  
                                              genes,  mount23, R=0.53, Bea L2 mixed 709, Bea Ras L2                              
                                              time course (99%), FP 1311 similar in intestine and                                
                                              muscle, FP 1938 Intestine genes, GD-Chol NSD/AMB,                                  
                                              GD-GABA NSD/AMB (Anova/TTest), GD-L1 Muscle Genes,                                 
                                              GD-L1-Sp (wrt U29 95), GD-L2 Muscle Genes, GD-The                                  
                                              Worm-Yeast in common with Muscle, GD-U25 muscle, GD-U29                            
                                              muscle genes, JW 1703 merged Peters zMuscle 8-02, L2 Hs                            
                                              genes 99.9, Neuro-1 L1 Upreg (11 20 00), Peter's                                   
                                              Acetyl-P001 Superset, Peter's All Muscle Genes (1 16                               
                                              01), Peter's Dorsal List (02-19-01), Peter's L1 Muscle                             
                                              Genes (95 Con; 02-01-01), Peter's L1-Dorsal+Excr avg                               
                                              (99.9), Peter's L2 Muscle (95 Con; 02-01-01), Peter's                              
                                              Muscle-Neuro Ubiq (99.9 Superset list), Peter's Neuro                              
                                              (95; 06-18-01), Peter's Neuro (99; 06-18-01), Peter's                              
                                              Neuro (99.9; 06-18-01), Peter's Superset of L1-L2 Genes                            
                                              (considering 99.9, PJ 836 muscle and intestine in                                  
                                              common, PJ 1005I0.05M0.001, PJ 1445 M0.05I0.001, PJ                                
                                              1617  Muscle and intestine in common, PJ 1899                                      
                                              IntestineMuscleCon95incommon, PJ 3085 intestinal genes,                            
                                              PJ 3118 intestinal genes, PJ 4746 intestinal gene                                  
                                              Con95, PJ No4 first1500, PJ No8 First 1500, PJ                                     
                                              No10-1-R16 First 1500, PJ No10-1-R15 First 1500,                                   
                                              PJRPAPER-1329 L1 Muscle List (genes within 10,                                     
                                              PJRPAPER-1329 L1 Muscle Genes (Chromo V),                                          
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1 Muscle Genes                            
                                              (1364), PJRPAPER-Ribosome Component, PJRPAPER-zL1                                  
                                              Muscle Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle                             
                                              Genes, PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes,                                 
                                              PJRPAPERz-L1 Cluster (10 kb; no para or ops),                                      
                                              PJRPAPERz-L1 Clustered(without Paralogues wit,                                     
                                              PJRPAPERz-L2 Clustered (inc Operons not Paral,                                     
                                              PJRPAPERz-L2 Clustered(without Paralogues wit, Protein                             
                                              expression, Proteome Cell Role (Oct 2000)- Protein                                 
                                              Synthesis, Proteome Funct Class (Mar 2000)-RNA-Binding                             
                                              Subuni, Proteome Funct Class (Mar 2000)-Ribosomal                                  
                                              subunit, Proteome LG V [May 2002], Proteomes Ribosomal                             
                                              List, rasl2, Reinke et al 2004, list of genes in                                   
                                              cluster order, RNA binding, rosetta, Valerie Reinke's                              
                                              11927 genes, wmyst, YK intestinal genes (p<.001), YK                               
                                              Similar muscle and intestine genes                                                 

C06C3.1 C06C3.1 P W All gene names: mel-11; C06C3.1; 2J657; CE20486; CE32566; CE32567; CE36682; NM_063593; WBGene00003196; WP:CE20486; WP:CE32566; WP:CE32567; WP:CE36682 WormBase description: ankyrin-like repeats
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount02, R=0.15,                                 
                                              stuart layer7, Cell Structure, josh laura2 4/8 common,                             
                                              Peter's Hypodermal Positive Controls (12 01 00), PJ                                
                                              4746 intestinal gene Con95, PJ negative control,                                   
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Hypodermal                                  
                                              Genes, PJRPAPER-Muscle negative controls,                                          
                                              PJRPAPER-Serine/Threonine Kinases, PJRPAPER-Tyrosine                               
                                              Kinase, Proteome Cell Role (Oct 2000)- Cell Structure,                             
                                              Proteome Funct Class (Mar 2000)-Regulatory Subunit,                                
                                              Proteome LG II [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, Valerie Reinke's 11927 genes,                              
                                              wmyst                                                                              

C06C6.6 C06C6.6 P W All gene names: C06C6.6; 5Q465; CE15600; WBGene00007380; WP:CE15600
                                              
Member of lists ( lists):
                                               mount04, R=0.41, age1-216daf2-1384All                            
                                              In age1daf2 modif 703 mi, daf-2 1384 min, daf-2 1384                               
                                              InAgingSetMin3ClusterC, PJ 2378                                                    
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome V Genes,                             
                                              PJRPAPER-Muslce (L1) negative controls-2, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG V                                
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

C06E1.3 C06E1.3 P W All gene names: C06E1.3; 3J669; CE30481; WBGene00015519; WP:CE30481
                                              
Member of lists ( lists):
                                               mount13, R=0.10, PJ 4212                                         
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C06E2.1 C06E2.1 P W All gene names: C06E2.1; CE03944; WBGene00015527; WP:CE03944; XJ490
                                              
Member of lists ( lists):
                                               mount14, R=0.38, daf-2 1384                                      
                                              InAgingSetMin3ClusterB, daf-2 1384 min, GD-Chol Down,                              
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes, GD-U29-Sp                             
                                              (wrt L1 95), Peter's Acetyl-P001 Superset,                                         
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome X Genes,                             
                                              PJRPAPER-xU29-specific (wrtWT), PJRPAPER-zU29WLev                                  
                                              down-up, PJRPAPER-zU29-Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG X [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C06E7.2 C06E7.2 P W All gene names: C06E7.2; C06E7.2.1; C06E7.2.2; 4G607; CE33516; WBGene00015539; WP:CE33516
                                              
Member of lists ( lists):
                                               mount06, R=0.21, JW SAGE Dauer all,                              
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order                                                             

C06E7.4 C06E7.4 P W All gene names: C06E7.4; 4G616; CE29026; WBGene00015541; WP:CE29026
                                              
Member of lists ( lists):
                                               mount10, R=0.19,  mount14, R=0.38, PJ                            
                                              1235 intestine-sepcific, PJ 2378                                                   
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome IV Genes, Proteome Cell Role                            
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG IV [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C06E7.6 C06E7.6 P W All gene names: spe-27; C06E7.6; 4G630; CE03962; NM_068474; WBGene00004973; WP:CE03962 WormBase description: Uncloned locus required for sperm activation (morphogenesis of sperm to crawling spermatozoa), and may act in a common signaling pathway with spe-12 and spe-29 to initiate sperm activation, based on genetic analysis.
                                              
Member of lists ( lists):
                                               mount17, R=0.37, GD-Chol Down,                                   
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes, GD-U29-Sp                             
                                              (wrt L1 95), male99, Male-enriched, Peter's Acetyl-P001                            
                                              Superset, PJ negative control, PJRPAPER-Cholin                                     
                                              Superset, PJRPAPER-Chromosome IV Genes, PJRPAPER-Male                              
                                              Genes, PJRPAPER-Muscle negative controls,                                          
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Sperm Genes, PJRPAPER-xU29-specific (wrtWT),                              
                                              PJRPAPER-zU29WLev down, PJRPAPER-zU29-Genes, Proteome                              
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              IV [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Sperm-enriched, Valerie                                    
                                              Reinke's 11927 genes                                                               

C06E8.5 C06E8.5 P W All gene names: C06E8.5; 3I92; CE00801; WBGene00015544; WP:CE00801 WormBase description: bacterial permeability-increasing protein
                                              
Member of lists ( lists):
                                               mount16, R=0.40, JW SAGE Dauer all,                              
                                              JW SAGE Dauer on Array v1, PJ 4212                                                 
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome X Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C06G1.1 C06G1.1 P W All gene names: C06G1.1; CE27054; WBGene00015545; WP:CE27054; XR251
                                              
Member of lists ( lists):
                                               mount14, R=0.38, daf-2 1384 min,                                 
                                              daf-2 1384 InAgingSetMin3ClusterA, JW AdjD T0 vs L1 T0                             
                                              short 254, JW Dauer ANOVA 2430 v4, JW Dauer Enriched by                            
                                              AdjDT0 vs L1T0, JW Dauer Recovery Specific 1984, JW                                
                                              Late 325, PJ 4212 IntestineMuscleTtest0.05,                                        
                                              PJRPAPER-Chromosome X Genes, PJRPAPER-Muslce (L1)                                  
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG X [May 2002], Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

C06G1.4 C06G1.4 P W All gene names: ain-1; C06G1.4; C06G1.4.1; C06G1.4.2; CE03967; WBGene00015547; WP:CE03967; XR231
                                              
Member of lists ( lists):
                                               mount01, R=0.15,  stuart layer7, FP                              
                                              1938 Intestine genes, PJ 2378 IntestineMusclettest0.01,                            
                                              PJ 4212 IntestineMuscleTtest0.05, PJ 4746 intestinal                               
                                              gene Con95, PJRPAPER-Chromosome X Genes, Proteome Cell                             
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG X                                
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes, YK                                   
                                              intestinal genes (p<.001), YK Similar muscle and                                   
                                              intestine genes                                                                    

C06G1.5 C06G1.5 P W All gene names: C06G1.5; CE37187; WBGene00015548; WP:CE37187; XR254 WormBase description: protein phosphatase PP2A
                                              
Member of lists ( lists):
                                               mount01, R=0.15, GD-Chol Down,                                   
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes, GD-U29-Sp                             
                                              (wrt L1 95), JW Dauer ANOVA 2430 v4, JW Dauer Recovery                             
                                              Specific 1984, JW Transient 195, Peter's Acetyl-P001                               
                                              Superset, PJ No 2 first 1500, PJRPAPER-Cholin Superset,                            
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-Protein                                     
                                              Phosphotases, PJRPAPER-xU29-specific (wrtWT),                                      
                                              PJRPAPER-zU29WLev down, PJRPAPER-zU29-Genes, Protein                               
                                              phosphatases, Proteome Cell Role (Oct 2000)- Genes of                              
                                              Unknown Ce, Proteome Funct Class (Mar 2000)-Protein                                
                                              Phosphotas, Proteome LG X [May 2002], Reinke et al                                 
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

C06G3.2 C06G3.2 P W All gene names: klp-18; C06G3.2; 4H807; CE07978; NM_068692; WBGene00002228; WP:CE07978 WormBase description: klp-18 encodes a kinesin motor protein whose motor domain is most similar to that of the Xenopus and human klp2 proteins; loss of klp-18 activity via RNAi indicates that KLP-18 is required for the assembly of a disordered array of acentrosomal (female meiotic) microtubules into an organized, functional, bipolar spindle; in addition, KLP-18 may also play a role in cortex dynamics during post-meiotic development; antibody staining indicates that during meiosis and mitosis (early embryonic) KLP-18 localizes to: 1) spindles, and especially spindle poles, during prometaphase, metaphase, and early anaphase, and 2) the interzone during late anaphase and telophase; in early embryos, KLP-18 is also seen around the nucleus and cell cortex at sites of cell-cell contact; KLP-18 expression in later embryos and larvae is confined to the germ line which, in adults, stains brightly in both distal and proximal regions. WormBase CDS description: kinesin-like protein
                                              
Member of lists ( lists):
                                              1214-L2-99-min,  mount07, R=0.43,                                 
                                              Art-1-7, Bea L2 mixed 709, Cell Structure, daf-16                                  
                                              p<.001, 7-01, PJ 1158IntestineMuscleTTEST0.001, PJ 1235                            
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Chromosome IV Genes, Proteome Cell Role                            
                                              (Oct 2000)- Cell Structure, Proteome LG IV [May 2002],                             
                                              Proteome Localization (Oct 2000)-Cytoskeletal, Reinke                              
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes                                                       

C06G4.1 C06G4.1 P W All gene names: C06G4.1; 3J79; CE28203; WBGene00015557; WP:CE28203 WormBase description: possible RNA binding protein
                                              
Member of lists ( lists):
                                               mount07, R=0.43, FP 1938 Intestine                               
                                              genes, PJ 1158IntestineMuscleTTEST0.001, PJ 1235                                   
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Chromosome III Genes, Reinke et al                                 
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, YK intestinal genes (p<.001), YK                             
                                              Similar muscle and intestine genes                                                 

C06G8.1 C06G8.1 P W All gene names: C06G8.1; 4L544; CE05229; WBGene00007384; WP:CE05229
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount08, R=0.21,                                 
                                              age1-216daf2-1384All In age1daf2 modif 703 mi, daf-2                               
                                              1384 min, daf-2 1384 InAgingSetMin3ClusterA, JW AdjD T0                            
                                              vs L1 T0 short 254, JW Dauer ANOVA 2430 v4, JW Dauer                               
                                              Enriched by AdjDT0 vs L1T0, JW Dauer Recovery Specific                             
                                              1984, JW Down 540, JW Down Late 162, megacluster 233                               
                                              min, PJ 2378 IntestineMusclettest0.01, PJ 4212                                     
                                              IntestineMuscleTtest0.05, PJ No5 first 1500,                                       
                                              PJRPAPER-Chromosome IV Genes, Proteome Cell Role (Oct                              
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C06H5.1 C06H5.1 P W All gene names: C06H5.1; 5S376; CE27668; WBGene00007392; WP:CE27668 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists ( lists):
                                               mount08, R=0.21, Aging p<.001, josh                              
                                              laura1/2 common, Proteome Cell Role (Oct 2000)- Genes                              
                                              of Unknown Ce, Proteome LG III [May 2002], Proteome LG                             
                                              V [May 2002], Ras spe99, Reinke et al 2004, list of                                
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C07A12.4 C07A12.4 P W All gene names: pdi-2; C07A12.4; C07A12.4a.1; C07A12.4a.2; CE03972; CE31878; NM_076377; NM_182439; WBGene00003963; WP:CE03972; WP:CE31878; XF145 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists ( lists):
                                               stuart layer7,  stuart layer12,                                  
                                              GD-Chol UP, GD-GABA NSD/AMB (Anova/TTest), GD-L1 Muscle                            
                                              Genes, GD-L1-Sp (wrt U29 95), GD-L2 Muscle Genes,                                  
                                              GD-Lev Muscle Genes, GD-Lev-Sp (wrt U29 95), GD-The                                
                                              Worm-Yeast in common with Muscle, JW 1703 merged Peters                            
                                              zMuscle 8-02, JW Climbing 386, JW Dauer ANOVA 2430 v4,                             
                                              JW Dauer Recovery Specific 1984, Peter's Acetyl-P001                               
                                              Superset, Peter's All Muscle Genes (1 16 01), Peter's                              
                                              Dorsal List (02-19-01), Peter's L1-Dorsal+Excr avg                                 
                                              (99.9), Peter's L1 Muscle Genes (95 Con; 02-01-01),                                
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's Lev UP                               
                                              unc-29 DOWN (anova+10), Peter's                                                    
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, PJ 836                                  
                                              muscle and intestine in common, PJ 1005I0.05M0.001, PJ                             
                                              1445 M0.05I0.001, PJ 1617  Muscle and intestine in                                 
                                              common, PJ 1899 IntestineMuscleCon95incommon, PJ 3085                              
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No5 first 1500, PJRPAPER-1329                            
                                              L1 Muscle List (genes within 10, PJRPAPER-1329 L1                                  
                                              Muscle Genes (Chromo X), PJRPAPER-Cholin Superset,                                 
                                              PJRPAPER-Chromosome X Genes, PJRPAPER-L1 Muscle Genes                              
                                              (95), PJRPAPER-L1 Muscle Genes (1364),                                             
                                              PJRPAPER-xWT-specific (wrtU29), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                             
                                              PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev up, PJRPAPERz-L1                            
                                              Cluster (10 kb; no para or ops), PJRPAPERz-L1                                      
                                              Clustered(without Paralogues wit, Proteome LG X [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, sir2.1ok434 283 min, sir2.1--ok434all                              
                                              558 min, Valerie Reinke's 11927 genes, wmyst                                       

C07A12.5 C07A12.5 P W All gene names: spr-3; C07A12.5; CE36266; CE36267; WBGene00005008; WP:CE36266; WP:CE36267; XF135 WormBase description: zinc finger protein
                                              
Member of lists ( lists):
                                               mount11, R=0.38, PJ 4212                                         
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome X Genes,                             
                                              PJRPAPER-Zinc Finger Containing Protein, Proteome Cell                             
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG X                                
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C07A9.5 C07A9.5 P W All gene names: C07A9.5; 3K770; CE02981; WBGene00007401; WP:CE02981 WormBase description: Actin-binding protein
                                              
Member of lists ( lists):
                                               mount04, R=0.41, male99,                                         
                                              Male-enriched, Peter's Unreliable Muscle Controls (03                              
                                              16 01), PJ No8 First 1500, PJRPAPER-Chromosome III                                 
                                              Genes, PJRPAPER-Male Genes, PJRPAPER-Muslce (L1)                                   
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG III [May 2002], Reinke                            
                                              et al 2004, list of genes in cluster order, rosetta, YK                            
                                              genes 95% different in muscle and intestin                                         

C07A9.7 C07A9.7 P W All gene names: C07A9.7; 3K782; CE00498; CE31769; WBGene00007403; WP:CE00498; WP:CE31769
                                              
Member of lists ( lists):
                                               mount02, R=0.15, GD-Chol NSD/AMB,                                
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes, GD-U29-Sp                             
                                              (wrt L1 95), Peter's Acetyl-P001 Superset,                                         
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome III                                  
                                              Genes, PJRPAPER-xU29-specific (wrtWT),                                             
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              III [May 2002], Reinke et al 2004, list of genes in                                
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              YK genes 95% different in muscle and intestin                                      

C07B5.2 C07B5.2 P W All gene names: C07B5.2; CE00892; WBGene00007407; WP:CE00892; XK134
                                              
Member of lists ( lists):
                                               mount01, R=0.15, FP 1938 Intestine                               
                                              genes, GD-Chol NSD/AMB, GD-GABA NSD/AMB (Anova/TTest),                             
                                              GD-U25 muscle, GD-U29 muscle genes, Male-enriched,                                 
                                              Peter's Acetyl-P001 Superset, Peter's Dorsal List                                  
                                              (02-19-01), Peter's L1-Dorsal+Excr avg (99.9), Peter's                             
                                              Neuro (95; 06-18-01), Peter's Neuro (99; 06-18-01),                                
                                              Peter's Neuro (99.9; 06-18-01), PJ 3085 intestinal                                 
                                              genes, PJ 3118 intestinal genes, PJ 4746 intestinal                                
                                              gene Con95, PJ No8 First 1500, PJRPAPER-Cholin                                     
                                              Superset, PJRPAPER-Chromosome X Genes,                                             
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              X [May 2002], Reinke et al 2004, list of genes in                                  
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              YK intestinal genes (p<.001)                                                       

C07B5.4 C07B5.4 P W All gene names: C07B5.4; C07B5.4b.1; C07B5.4b.2; CE37311; CE37312; WBGene00007409; WP:CE37311; WP:CE37312; XK153
                                              
Member of lists ( lists):
                                               mount08, R=0.21, PJ 2378                                         
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome X Genes,                             
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG X [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C07D10.2 C07D10.2 P W All gene names: bath-44; C07D10.2; C07D10.2b.1; C07D10.2b.2; 2H687; CE27057; CE29072; WBGene00015567; WP:CE27057; WP:CE29072 WormBase description: The C07D10.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis.
                                              
Member of lists ( lists):
                                               mount11, R=0.38, FP 645 Intestine                                
                                              specific genes, FP 1938 Intestine genes, JW Dauer                                  
                                              Enriched AdjT0 vs AdjT12, JW Dauer Enriched by AdjDT0                              
                                              vs L1T0, PJ 1158IntestineMuscleTTEST0.001, PJ 2378                                 
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome II Genes,                            
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG II [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C07D10.4 C07D10.4 P W All gene names: nas-7; C07D10.4; 2H690; CE34663; NM_063151; WBGene00003526; WP:CE34663 WormBase description: Zinc metalloprotease
                                              
Member of lists ( lists):
                                               mount16, R=0.40, JW Dauer ANOVA 2430                             
                                              v4, JW Dauer Recovery Specific 1984, JW Late 325, PJ                               
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome II Genes, Proteome Cell Role                            
                                              (Oct 2000)- Genes of Unknown Ce, Proteome LG II [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

C07D10.5 C07D10.5 P W All gene names: C07D10.5; 2H673; CE36628; WBGene00015569; WP:CE36628
                                              
Member of lists ( lists):
                                               mount12, R=0.29, daf-16 p<.001, 7-01,                            
                                              PJ 4212 IntestineMuscleTtest0.05, PJRPAPER-Chromosome                              
                                              II Genes, Proteome Cell Role (Oct 2000)- Genes of                                  
                                              Unknown Ce, Proteome LG II [May 2002], Reinke et al                                
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes                                                               

C07E3.10 C07E3.10 P W All gene names: C07E3.10; 2K637; CE15607; WBGene00007420; WP:CE15607
                                              
Member of lists ( lists):
                                               mount14, R=0.38, daf-2 1384 min,                                 
                                              daf-2 1384 InAgingSetMin3ClusterB, JW Dauer ANOVA 2430                             
                                              v4, JW Dauer Recovery Specific 1984, JW Late 325,                                  
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Muslce (L1)                                 
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG II [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order                                         

C07E3.3 C07E3.3 P W All gene names: C07E3.3; 2K644; CE32305; WBGene00007414; WP:CE32305
                                              
Member of lists ( lists):
                                              Male-enriched, PJRPAPER-Chromosome II                             
                                              Genes, PJRPAPER-Muslce (L1) negative controls-2,                                   
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG II [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C07E3.4 C07E3.4 P W All gene names: C07E3.4; 2K653; CE02120; WBGene00007415; WP:CE02120 WormBase description: Protein-tyrosine phosphatase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, PJ                                              
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromosome II Genes, PJRPAPER-Sperm                                
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG II [May 2002], Reinke et al 2004, list                             
                                              of genes in cluster order, rosetta, Sperm-enriched,                                
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin                                                                

C07E3.7 C07E3.7 P W All gene names: C07E3.7; WBGene00043116
                                              
Member of lists ( lists):
                                              Proteome LG II [May 2002], Reinke et                              
                                              al 2004, list of genes in cluster order                                            

C07E3.9 C07E3.9 P W All gene names: C07E3.9; 2K641; CE02124; WBGene00007419; WP:CE02124 WormBase description: phospholipase A2
                                              
Member of lists ( lists):
                                               mount22, R=0.58, Art-1-7, GD-Chol                                
                                              Down, GD-GABA NSD/AMB (Anova/TTest), GD-U25 muscle,                                
                                              GD-U29-Sp (wrt Lev 95), GD-U29 muscle genes,                                       
                                              GDPAPER-Prelim Mixed Muscle, Peter's Acetyl-P001                                   
                                              Superset, Peter's All Muscle Genes (1 16 01), Peter's                              
                                              L1 Muscle Genes (95 Con; 02-01-01), Peter's L2 Muscle                              
                                              (95 Con; 02-01-01), Peter's Muscle-Neuro Ubiq (99.9                                
                                              Superset list), Peter's Neuro (95; 06-18-01), Peter's                              
                                              Neuro (99; 06-18-01), Peter's Neuro (99.9; 06-18-01),                              
                                              Peter's UP-Reg Muscle (10 25 00), PJ No8 First 1500,                               
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome II Genes,                            
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-zU29WLev nsd, PJRPAPER-zU29-Genes, Proteome                               
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome LG                             
                                              II [May 2002], Reinke et al 2004, list of genes in                                 
                                              cluster order, rosetta, Valerie Reinke's 11927 genes                               

C07G1.3 C07G1.3 P W All gene names: pct-1; C07G1.3; C07G1.3a.1; C07G1.3a.2; 4I953; CE06779; CE29073; CE32571; NM_068971; WBGene00003961; WP:CE06779; WP:CE29073; WP:CE32571; pct WormBase description: ser/thr protein kinase
                                              
Member of lists ( lists):
                                               mount11, R=0.38, Cell cycle genes,                               
                                              GD-Chol "\/", GD-Lev Muscle Genes, GD-Lev-Sp (wrt wt                               
                                              95), GD-U29 muscle genes, GD-U29-Sp (wrt L1 95),                                   
                                              Mitosis genes, Peter's Acetyl-P001 Superset, PJ                                    
                                              1158IntestineMuscleTTEST0.001, PJ 2378                                             
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No8 First 1500, PJRPAPER-Cell Cycle Genes,                               
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome IV Genes,                            
                                              PJRPAPER-Mitosis, PJRPAPER-Serine/Threonine Kinases,                               
                                              PJRPAPER-xLEV-specific (wrtWT), PJRPAPER-xU29-specific                             
                                              (wrtWT), PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev                                    
                                              down-up, PJRPAPER-zU29-Genes, Protein kinases, Proteome                            
                                              Cell Role (Oct 2000)- Mitosis, Proteome Cell Role (Oct                             
                                              2000)- Cell Cycle Control, Proteome Cell Role (Oct                                 
                                              2000)- Protein Modificatio, Proteome Funct Class (Mar                              
                                              2000)-Transferase, Proteome Funct Class (Mar                                       
                                              2000)-Protein Kinase, Proteome LG IV [May 2002], Reinke                            
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, wmyst, YK genes 95%                                  
                                              different in muscle and intestin                                                   

C07G2.1 C07G2.1 P W All gene names: cej-1; C07G2.1; C07G2.1a.1; C07G2.1a.2; 3F579; CE00665; CE33971; WBGene00000465; WP:CE00665; WP:CE33971 WormBase description: cej-1 encodes a protein with a chitin binding peritrophin-A domain that is required, in conjunction with B0280.5, for early embryonic development; cej-1 mRNA is expressed specifically in the adult hermaphrodite germ line, is a direct target of GLD-1, and has an RNAi phenotype consistent with the hypothesis that CEJ-1 is an effector of GLD-1 in the germline.
                                              
Member of lists ( lists):
                                               mount07, R=0.43, GDPAPER-Prelim Mixed                            
                                              Muscle, Germ line-enriched, Highly regulated #2, josh                              
                                              laura1/2 common, Peter's All Muscle Genes (1 16 01),                               
                                              Peter's UP-Reg Muscle (10 25 00), PJ                                               
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No4 first1500, PJ No5 first 1500, PJ No8                                 
                                              First 1500, PJ No10-1-R15 First 1500, PJ No10-1-R16                                
                                              First 1500, PJ No 2 first 1500, PJRPAPER-Chromosome III                            
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG III [May 2002], Reinke et al 2004, list                            
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes                                                                        

C07G3.2 C07G3.2 P W All gene names: C07G3.2; 5D999; CE07993; WBGene00015574; WP:CE07993
                                              
Member of lists ( lists):
                                               mount25, R=0.44, FP 645 Intestine                                
                                              specific genes, FP 1938 Intestine genes,                                           
                                              PJRPAPER-Chromosome V Genes, Proteome Cell Role (Oct                               
                                              2000)- Genes of Unknown Ce, Proteome LG V [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin, YK intestinal genes                              
                                              (p<.001), YK intestine-specific genes                                              

C07H6.3 C07H6.3 P W All gene names: C07H6.3; C07H6.3.1; C07H6.3.2; 3I603; CE29074; WBGene00015580; WP:CE29074
                                              
Member of lists ( lists):
                                              JW Dauer ANOVA 2430 v4, JW Dauer                                  
                                              Recovery Specific 1984, JW Early 538, Male-enriched,                               
                                              Peter's Neuro (95; 06-18-01), Peter's Neuro (99;                                   
                                              06-18-01), PJRPAPER-Chromosome III Genes, Proteome Cell                            
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome LG III                              
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C07H6.4 C07H6.4 P W All gene names: C07H6.4; 3I591; CE00755; WBGene00015581; WP:CE00755 WormBase description: Probable RNA binding protein
                                              
Member of lists ( lists):
                                               mount11, R=0.38,  stuart layer13, FP                             
                                              1311 similar in intestine and muscle, FP 1938 Intestine                            
                                              genes, GD-Chol Down, GD-GABA NSD/AMB (Anova/TTest),                                
                                              GD-L1 Muscle Genes, GD-L2 Muscle Genes, GD-U29 muscle                              
                                              genes, GD-U29-Sp (wrt Lev 95), GD-WT-Sp (wrt Lev 95),                              
                                              Germ line-enriched, JW 1703 merged Peters zMuscle 8-02,                            
                                              Peter's Acetyl-P001 Superset, Peter's All Muscle Genes                             
                                              (1 16 01), Peter's L1 Muscle Genes (95 Con; 02-01-01),                             
                                              Peter's L2 Muscle (95 Con; 02-01-01), Peter's Superset                             
                                              of L1-L2 Genes (considering 99.9, PJ 836 muscle and                                
                                              intestine in common, PJ 1005I0.05M0.001, PJ 1445                                   
                                              M0.05I0.001, PJ 1617  Muscle and intestine in common,                              
                                              PJ 1899 IntestineMuscleCon95incommon, PJ 3085                                      
                                              intestinal genes, PJ 3118 intestinal genes, PJ 4746                                
                                              intestinal gene Con95, PJ No10-1-R16 First 1500, PJ                                
                                              No10-1-R15 First 1500, PJRPAPER-1329 L1 Muscle Genes                               
                                              (Chromo III), PJRPAPER-1329 L1 Muscle List (genes                                  
                                              without 1, PJRPAPER-Cholin Superset,                                               
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-L1 Muscle Genes                            
                                              (95), PJRPAPER-L1 Muscle Genes (1364),                                             
                                              PJRPAPER-xWT-specific (wrtLEV), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                             
                                              PJRPAPER-zU29WLev down, PJRPAPER-zU29-Genes, Proteome                              
                                              Cell Role (Oct 2000)- Genes of Unknown Ce, Proteome                                
                                              Funct Class (Mar 2000)-RNA-Binding Subuni, Proteome LG                             
                                              III [May 2002], Reinke et al 2004, list of genes in                                
                                              cluster order, RNA binding, Valerie Reinke's 11927                                 
                                              genes, YK intestinal genes (p<.001), YK Similar muscle                             
                                              and intestine genes                                                                

C07H6.5 C07H6.5 P W All gene names: cgh-1; C07H6.5; C07H6.5.1; C07H6.5.2; 3I586; CE00839; NM_066245; WBGene00000479; WP:CE00839 WormBase description: The ortholog of a RNA helicase ste13/ME31B/RCK/p54 that is required for oocyte and sperm function and the prevention of physiological germline-associated apoptosis; it is expressed in the early embryo and germline and localizes to P granules. WormBase CDS description: ATP-dependent RNA helicase
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              daf-2 1384 min, daf-2 1384 InAgingSetMin3ClusterC,                                 
                                              GDPAPER-Prelim Mixed Muscle, Germ line-enriched, josh                              
                                              laura1/2 common, josh laura2 4/8 common, Peter's All                               
                                              Muscle Genes (1 16 01), Peter's Lev UP unc-29 DOWN                                 
                                              (anova+10), Peter's UP-Reg Muscle (10 25 00),                                      
                                              PJRGDPAPER-Yeast Mito (All)-Worm Homologues,                                       
                                              PJRGDPAPER-Yeast Mito (Prokaryotic)-Worm Homo,                                     
                                              PJRPAPER-Chromosome III Genes, PJRPAPER-RNA Processing,                            
                                              Protein expression, Proteome Cell Role (Oct 2000)- RNA                             
                                              Processing/Modi, Proteome Funct Class (Mar                                         
                                              2000)-Helicase, Proteome LG III [May 2002], Proteome                               
                                              Localization (Oct 2000)-Nuclear, Reinke et al 2004,                                
                                              list of genes in cluster order, rosetta, Valerie                                   
                                              Reinke's 11927 genes, wmyst                                                        

C08B11.1 C08B11.1 P W All gene names: zyg-11; C08B11.1; 2I309; CE01471; NM_063276; WBGene00006996; WP:CE01471 WormBase description: Leucine Rich Repeat (2 copies)
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              Art-1-7, embry devel, josh laura1/2 common, josh laura2                            
                                              4/8 common, Oocyte-enriched, PJ 2378                                               
                                              IntestineMusclettest0.01, PJ 4212                                                  
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome II Genes,                            
                                              PJRPAPER-Meiosis, PJRPAPER-Oocyte Genes, Proteome Cell                             
                                              Role (Oct 2000)- Meiosis, Proteome LG II [May 2002],                               
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C08B11.2 C08B11.2 P W All gene names: hda-2; C08B11.2; 2I312; CE01472; NM_063277; WBGene00001835; WP:CE01472 WormBase description: transcriptional regulatory protein (RPD3)
                                              
Member of lists ( lists):
                                               mount02, R=0.15, Aging p<.001, C.                                
                                              elegans transcription factors, FP 1938 Intestine genes,                            
                                              Germ line-enriched, PJ 1158IntestineMuscleTTEST0.001,                              
                                              PJ 2378 IntestineMusclettest0.01, PJ 4212                                          
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Chromatin/Chromosome Structure,                                    
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Histone                                     
                                              deacetylases (Putative), Proteome Cell Role (Oct 2000)-                            
                                              Chromatin/Chromosom, Proteome Cell Role (Oct 2000)- Pol                            
                                              II Transcriptio, Proteome Funct Class (Mar                                         
                                              2000)-Hydrolase, Proteome LG II [May 2002], Proteome                               
                                              Localization (Oct 2000)-Nuclear, Reinke et al 2004,                                
                                              list of genes in cluster order, RNA pol II                                         
                                              transcription, Valerie Reinke's 11927 genes, wmyst, YK                             
                                              intestinal genes (p<.001), YK Similar muscle and                                   
                                              intestine genes                                                                    

C08B11.3 C08B11.3 P W All gene names: C08B11.3; 2I314; CE01473; WBGene00007433; WP:CE01473 WormBase description: Zinc finger, C2H2 type
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount09, R=0.16,                                 
                                              operon first genes, PJ 4212 IntestineMuscleTtest0.05,                              
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Zinc Finger                                 
                                              Containing Protein, Proteome Cell Role (Oct 2000)-                                 
                                              Genes of Unknown Ce, Proteome LG II [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Valerie Reinke's 11927 genes, YK genes 95% different in                            
                                              muscle and intestin                                                                

C08B11.4 C08B11.4 P W All gene names: nrf-6; C08B11.4; 2I320; CE27798; NM_063279; WBGene00003813; WP:CE27798 WormBase description: nrf-6 encodes a protein with 12 predicted transmembrane domains that is highly similar to NDG-4 and affects embryonic viability, yolk transport, locomotion, body morphology, and affects sensitivity to fluoxetine with respect to nose-contraction response in a common pathway with ndg-4 and nrf-5; expressed in the most anterior cells of the hypodermis and in the intestine and is required in the intestine for fluoxetine-induced nose contraction and yolk transport
                                              
Member of lists ( lists):
                                              684 N2 hs min (L2), 1003 N2 hs min                                
                                              (egg + L2),  mount08, R=0.21, Art-1-7, josh laura1/2                               
                                              common, JW Dauer Enriched by AdjDT0 vs L1T0, L2 Hs                                 
                                              genes 99.9, PJ 4212 IntestineMuscleTtest0.05,                                      
                                              PJRPAPAR-Acetycholine Receptors, PJRPAPER-Chromosome II                            
                                              Genes, PJRPAPER-Muscle negative controls,                                          
                                              PJRPAPER-Plasma Membrane, PJRs Acetylcholine Genes                                 
                                              Poorly Characterized (Pos, Proteome Cell Role (Oct                                 
                                              2000)- Genes of Unknown Ce, Proteome Cell Role (Oct                                
                                              2000)- Small Molecule Tran, Proteome Cell Role (Oct                                
                                              2000)- Signal Transduction, Proteome Funct Class (Mar                              
                                              2000)-Transporter, Proteome Funct Class (Mar                                       
                                              2000)-Receptor (Signalin, Proteome LG II [May 2002],                               
                                              Proteome Localization (Oct 2000)-Unspecified membr,                                
                                              Proteome Localization (Oct 2000)-Plasma membrane,                                  
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes, YK genes 95%                                
                                              different in muscle and intestin                                                   

C08B11.6 C08B11.6 P W All gene names: C08B11.6; C08B11.6.1; C08B11.6.2; CE30856; WBGene00007434; WP:CE30856 WormBase description: actin
                                              
Member of lists ( lists):
                                               mount02, R=0.15, Cell Structure,                                 
                                              Cellbio, Germ line-enriched, Peter's Unreliable Muscle                             
                                              Controls (03 16 01), PJ 4212 IntestineMuscleTtest0.05,                             
                                              PJRGDPAPER-General Cytoskeletal Proteins,                                          
                                              PJRPAPER-Chromosome II Genes, PJRPAPER-Cytoskeleton,                               
                                              Proteome Cell Role (Oct 2000)- Cell Structure, Proteome                            
                                              Funct Class (Mar 2000)-Structural Protein, Proteome LG                             
                                              II [May 2002], Proteome Localization (Oct                                          
                                              2000)-Cytoskeletal, Reinke et al 2004, list of genes in                            
                                              cluster order, rosetta, Valerie Reinke's 11927 genes,                              
                                              wmyst                                                                              

C08B6.3 C08B6.3 P W All gene names: C08B6.3; 5K592; CE05240; WBGene00007424; WP:CE05240
                                              
Member of lists ( lists):
                                               mount09, R=0.16, JW Dauer ANOVA 2430                             
                                              v4, JW Dauer Recovery Specific 1984, JW Transient 195,                             
                                              PJRPAPER-Chromosome V Genes, Proteome Cell Role (Oct                               
                                              2000)- Genes of Unknown Ce, Proteome LG V [May 2002],                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C08B6.9 C08B6.9 P W All gene names: aos-1; C08B6.9; 5K608; CE05246; NM_073203; WBGene00000142; WP:CE05246 WormBase description: aos-1 encodes the C. elegans ortholog of Saccharomyces cerevisiae Aos1p and human SUMO-1 activating enzyme E1 N subunit; by homology, AOS-1 is predicted to form, with a catalytic subunit, UBA-2, a heterodimeric enzyme that activates the ubiquitin-like protein SMO-1/SUMO in preparation for its covalent attachment to target proteins to regulate their subcellular localization and/or stability; in C. elegans, AOS-1 is required for embryonic and larval development, as well as for proper Hox gene regulation; uba-2/aos-1(RNAi) animals that survive embryogenesis show ectopic expression of EGL-5 and ectopic anterior sensory ray formation. WormBase CDS description: ubiquitin activating enzyme
                                              
Member of lists ( lists):
                                               mount02, R=0.15, Aging p < .01, Aging                            
                                              p<.001, GD-Chol "\/", GD-Lev Muscle Genes, GD-Lev-Sp                               
                                              (wrt wt 95), Germ line-enriched,                                                   
                                              Hermaphrodite-enriched, Peter's Acetyl-P001 Superset,                              
                                              PJ 1158IntestineMuscleTTEST0.001, PJ 1235                                          
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJRPAPER-Cholin Superset, PJRPAPER-Chromosome V                             
                                              Genes, PJRPAPER-Protein Degradation,                                               
                                              PJRPAPER-Ubiquitin-Related, PJRPAPER-xLEV-specific                                 
                                              (wrtWT), PJRPAPER-zLev-Genes, PJRPAPER-zU29WLev                                    
                                              down-up, Protein expression, Proteome Cell Role (Oct                               
                                              2000)- Protein Modificatio, Proteome Cell Role (Oct                                
                                              2000)- Protein Degradation, Proteome Funct Class (Mar                              
                                              2000)-Activator, Proteome LG V [May 2002], Reinke et al                            
                                              2004, list of genes in cluster order, rosetta, Valerie                             
                                              Reinke's 11927 genes, wmyst, YK genes 95% different in                             
                                              muscle and intestin                                                                

C08C3.2 C08C3.2 P W All gene names: bath-15; C08C3.2; 3I864; CE39087; WBGene00015590; WP:CE39087
                                              
Member of lists ( lists):
                                               mount07, R=0.43, GD-GABA Up                                      
                                              (Anova/TTest), GD-Musc muscle, Germ line-enriched, josh                            
                                              laura1/2 common, PJRPAPER-Chromosome III Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG III [May 2002], Reinke et al 2004, list of                             
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C08E3.13 C08E3.13 P W All gene names: C08E3.13; 2B924; WBGene00015605
                                              
Member of lists ( lists):
                                               mount08, R=0.21, GD-Chol "/\",                                   
                                              GD-GABA Down (Anova/TTest), GD-L1 Muscle Genes,                                    
                                              GD-L1-Sp (wrt U29 95), GD-L2 Muscle Genes, GD-WT-Sp                                
                                              (wrt Lev 95), Highly regulated #2, josh laura1/2                                   
                                              common, JW 1703 merged Peters zMuscle 8-02, Neuro-1 L1                             
                                              Upreg (11 20 00), Peter's Acetyl-P001 Superset, Peter's                            
                                              All Muscle Genes (1 16 01), Peter's Dorsal List                                    
                                              (02-19-01), Peter's L1-Dorsal+Excr avg (99.9), Peter's                             
                                              L1 Muscle Genes (95 Con; 02-01-01), Peter's L2 Muscle                              
                                              (95 Con; 02-01-01), Peter's                                                        
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9,                                         
                                              PJRPAPER-Cholin Superset, PJRPAPER-Chromosome II Genes,                            
                                              PJRPAPER-L1 Muscle Genes (95), PJRPAPER-L1 Muscle Genes                            
                                              (1364), PJRPAPER-xWT-specific (wrtLEV),                                            
                                              PJRPAPER-xWT-specific (wrtU29), PJRPAPER-zL1 Muscle                                
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zL2 Muscle Genes,                             
                                              PJRPAPER-zU29WLev up-down, Proteome Cell Role (Oct                                 
                                              2000)- Genes of Unknown Ce, Proteome LG II [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta                                                                            

C08F1.6 C08F1.6 P W All gene names: C08F1.6; 2C78; CE08021; WBGene00015610; WP:CE08021
                                              
Member of lists ( lists):
                                               mount12, R=0.29, PJ 4212                                         
                                              IntestineMuscleTtest0.05, PJRPAPER-Chromosome II Genes,                            
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG II [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin                               

C08F11.10 C08F11.10 P W All gene names: C08F11.10; 4O412; CE17387; WBGene00007457; WP:CE17387
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Aging p < .01,                                  
                                              Aging.p01, Art-1-7, Male-enriched, PJ 4746 intestinal                              
                                              gene Con95, PJRPAPER-Chromosome IV Genes,                                          
                                              PJRPAPER-Muscle negative controls, PJRPAPER-Muslce (L1)                            
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, Valerie                                
                                              Reinke's 11927 genes                                                               

C08F11.11 C08F11.11 P W All gene names: C08F11.11; 4O410; CE17388; WBGene00007458; WP:CE17388
                                              
Member of lists ( lists):
                                               mount22, R=0.58, FP 1938 Intestine                               
                                              genes, GDPAPER-Prelim Mixed Muscle, Highly regulated                               
                                              #2, Highly regulated genes, josh laura1/2 common,                                  
                                              Peter's All Muscle Genes (1 16 01), Peter's Neuro (95;                             
                                              06-18-01), Peter's Neuro (99; 06-18-01), Peter's UP-Reg                            
                                              Muscle (10 25 00), PJ 1158IntestineMuscleTTEST0.001, PJ                            
                                              1235 intestine-sepcific, PJ 2378                                                   
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJ No5 first 1500, PJ No8 First 1500, PJ                                    
                                              No10-1-R15 First 1500, PJ No10-1-R16 First 1500,                                   
                                              PJRPAPER-Chromosome IV Genes, PJRPAPER-Muslce (L1)                                 
                                              negative controls-2, Proteome Cell Role (Oct 2000)-                                
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, Valerie                                
                                              Reinke's 11927 genes, YK intestinal genes (p<.001), YK                             
                                              Similar muscle and intestine genes                                                 

C08F11.12 C08F11.12 P W All gene names: C08F11.12; 4O416; CE17389; WBGene00007459; WP:CE17389
                                              
Member of lists ( lists):
                                               mount22, R=0.58, GDPAPER-Prelim Mixed                            
                                              Muscle, Highly regulated #2, Highly regulated genes,                               
                                              josh laura1/2 common, Peter's All Muscle Genes (1 16                               
                                              01), Peter's UP-Reg Muscle (10 25 00), PJ No5 first                                
                                              1500, PJ No 2 first 1500, Proteome Cell Role (Oct                                  
                                              2000)- Genes of Unknown Ce, Proteome LG IV [May 2002],                             
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              rosetta, Valerie Reinke's 11927 genes                                              

C08F8.3 C08F8.3 P W All gene names: C08F8.3; 4L921; CE30596; WBGene00007445; WP:CE30596
                                              
Member of lists ( lists):
                                               mount07, R=0.43,  stuart layer13,                                
                                              daf-16 p<.001, 7-01, Germ line-enriched, PJ                                        
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No 2 first 1500, PJRPAPER-Chromosome IV                                  
                                              Genes, Proteome Cell Role (Oct 2000)- Genes of Unknown                             
                                              Ce, Proteome LG IV [May 2002], Reinke et al 2004, list                             
                                              of genes in cluster order, rosetta, Valerie Reinke's                               
                                              11927 genes, YK genes 95% different in muscle and                                  
                                              intestin                                                                           

C08F8.4 C08F8.4 P W All gene names: C08F8.4; 4L922; CE05251; WBGene00007446; WP:CE05251
                                              
Member of lists ( lists):
                                               mount04, R=0.41, male99,                                         
                                              Male-enriched, PJRPAPER-Chromosome IV Genes,                                       
                                              PJRPAPER-Male Genes, PJRPAPER-Muscle negative controls,                            
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes, YK genes                             
                                              95% different in muscle and intestin                                               

C08F8.5 C08F8.5 P W All gene names: fbxb-9; C08F8.5; 4L924; CE05252; WBGene00007447; WP:CE05252 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
                                              
Member of lists ( lists):
                                               mount09, R=0.16, PJRPAPER-Chromosome                             
                                              IV Genes, PJRPAPER-Muslce (L1) negative controls-2,                                
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG IV [May 2002], Reinke et al 2004, list of                              
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C08F8.6 C08F8.6 P W All gene names: C08F8.6; 4L926; CE05253; WBGene00007448; WP:CE05253 WormBase description: serine/threonine kinase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, male99,                                         
                                              Male-enriched, PJ 1235 intestine-sepcific, PJ 2378                                 
                                              IntestineMusclettest0.01, PJ 3085 intestinal genes, PJ                             
                                              3118 intestinal genes, PJ 4212                                                     
                                              IntestineMuscleTtest0.05, PJ 4746 intestinal gene                                  
                                              Con95, PJRPAPER-Casein Kinases, PJRPAPER-Chromosome IV                             
                                              Genes, PJRPAPER-Male Genes, PJRPAPER-Muslce (L1)                                   
                                              negative controls-2, PJRPAPER-Serine/Threonine Kinases,                            
                                              PJRPAPER-Sperm Genes, Protein kinases, Proteome Cell                               
                                              Role (Oct 2000)- Signal Transduction, Proteome Funct                               
                                              Class (Mar 2000)-Protein Kinase, Proteome LG IV [May                               
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Sperm-enriched, Valerie Reinke's 11927                             
                                              genes                                                                              

C09B8.1 C09B8.1 P W All gene names: ipp-5; C09B8.1; CE30857; NM_076607; WBGene00002146; WP:CE30857; XG651 WormBase description: ipp-5 encodes a type I inositol 5-phosphatase homolog; ipp-5 acts downstream of let-23 to negatively regulate IP3 signaling and is involved in spermathecal contractions during ovulation; an ipp-5::gfp transcriptional reporter is expressed in the adult distal spermatheca and weakly in the proximal sheath.
                                              
Member of lists ( lists):
                                               mount01, R=0.15, daf-2 1384 min,                                 
                                              daf-2 1384 InAgingSetMin3ClusterA, PJRPAPER-Chromosome                             
                                              X Genes, PJRPAPER-Other Phosphotases, Proteome Cell                                
                                              Role (Oct 2000)- Genes of Unknown Ce, Proteome Funct                               
                                              Class (Mar 2000)-Other Phosphotases, Proteome LG X [May                            
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Valerie Reinke's 11927 genes                                       

C09B9.2 C09B9.2 P W All gene names: C09B9.2; 4F795; CE06794; WBGene00015627; WP:CE06794
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Male-enriched,                                  
                                              Peter's Neuro (95; 06-18-01), Peter's Neuro (99;                                   
                                              06-18-01), PJRPAPER-Chromosome IV Genes,                                           
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Sperm Genes, Proteome Cell Role (Oct 2000)-                               
                                              Genes of Unknown Ce, Proteome LG IV [May 2002], Reinke                             
                                              et al 2004, list of genes in cluster order, rosetta,                               
                                              Sperm-enriched, Valerie Reinke's 11927 genes                                       

C09B9.4 C09B9.4 P W All gene names: C09B9.4; 4F796; CE06796; WBGene00015629; WP:CE06796 WormBase description: ser/thr protein kinase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, Male-enriched,                                  
                                              PJRPAPER-Casein Kinases, PJRPAPER-Chromosome IV Genes,                             
                                              PJRPAPER-Muslce (L1) negative controls-2,                                          
                                              PJRPAPER-Serine/Threonine Kinases, Protein kinases,                                
                                              Proteome Cell Role (Oct 2000)- Protein Modificatio,                                
                                              Proteome Cell Role (Oct 2000)- Signal Transduction,                                
                                              Proteome Funct Class (Mar 2000)-Transferase, Proteome                              
                                              Funct Class (Mar 2000)-Protein Kinase, Proteome LG IV                              
                                              [May 2002], Reinke et al 2004, list of genes in cluster                            
                                              order, rosetta, Valerie Reinke's 11927 genes, wmyst, YK                            
                                              genes 95% different in muscle and intestin                                         

C09B9.6 C09B9.6 P W All gene names: msp-55; C09B9.6; 4F820; CE06798; NM_068310; WBGene00003448; WP:CE06798 WormBase description: msp-55 encodes a member of the major sperm protein family. WormBase CDS description: major sperm protein
                                              
Member of lists ( lists):
                                              771-Egg-99-min,  mount04, R=0.41, Cell                            
                                              Structure, Highly regulated #2, Highly regulated genes,                            
                                              josh laura1/2 common, Male-enriched, MSP genes, PJ                                 
                                              1158IntestineMuscleTTEST0.001, PJ 1235                                             
                                              intestine-sepcific, PJ 2378 IntestineMusclettest0.01,                              
                                              PJ 3085 intestinal genes, PJ 3118 intestinal genes, PJ                             
                                              4212 IntestineMuscleTtest0.05, PJ 4746 intestinal gene                             
                                              Con95, PJ No8 First 1500, PJ No10-1-R15 First 1500, PJ                             
                                              No10-1-R16 First 1500, PJRPAPER-Chromosome IV Genes,                               
                                              PJRPAPER-Muscle negative controls, PJRPAPER-Muslce (L1)                            
                                              negative controls-2, PJRPAPER-Sperm Genes, Proteome                                
                                              Cell Role (Oct 2000)- Cell Structure, Proteome Funct                               
                                              Class (Mar 2000)-Structural Protein, Proteome LG IV                                
                                              [May 2002], Proteome Localization (Oct                                             
                                              2000)-Cytoplasmic, Reinke et al 2004, list of genes in                             
                                              cluster order, rosetta, Sperm-enriched, Valerie                                    
                                              Reinke's 11927 genes, YK genes 95% different in muscle                             
                                              and intestin                                                                       

C09D1.1 C09D1.1 P W All gene names: phm-1; unc-89; C09D1.1; 1E657; CE30426; CE34251; CE34252; CE37701; CE37702; CE37703; CE37704; WBGene00006820; WP:CE30426; WP:CE34251; WP:CE34252; WP:CE37701; WP:CE37702; WP:CE37703; WP:CE37704 WormBase description: protein kinase
                                              
Member of lists ( lists):
                                               mount01, R=0.15, FP 464 Muscle                                   
                                              specific genes, Fraser's Complete RNAi List, Fraser's                              
                                              UNC list, GD-Chol NSD/AMB, GD-GABA Up (Anova/TTest),                               
                                              GD-L1 Muscle Genes, GDPAPER-Prelim Mixed Muscle, JW                                
                                              1703 merged Peters zMuscle 8-02, Peter's Acetyl-P001                               
                                              Superset, Peter's All Muscle Genes (1 16 01), Peter's                              
                                              L1 Muscle Genes (95 Con; 02-01-01), Peter's L2 Muscle                              
                                              (95 Con; 02-01-01), Peter's                                                        
                                              Musc-non-neuro(sp&enri;fr99.9 Superset), Peter's                                   
                                              Superset of L1-L2 Genes (considering 99.9, Peter's                                 
                                              UP-Reg Muscle (10 25 00), PJ 82 Muscle-sepcific, PJ                                
                                              4212 IntestineMuscleTtest0.05, PJ negative control,                                
                                              PJRPAPER-1329 L1 Muscle Genes (Chromo I), PJRPAPER-1329                            
                                              L1 Muscle List (genes without 1, PJRPAPER-Cholin                                   
                                              Superset, PJRPAPER-Chromosome I Genes, PJRPAPER-L1                                 
                                              Muscle Genes (95), PJRPAPER-L1 Muscle Genes (1364),                                
                                              PJRPAPER-Muscle Positive Controls, PJRPAPER-zL1 Muscle                             
                                              Genes, PJRPAPER-zL1vL2 nsd, PJRPAPER-zU29WLev nsd,                                 
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes, YK genes 95% different in muscle and intestin,                              
                                              YK muscle-specific genes                                                           

C09D4.2 C09D4.2 P W All gene names: C09D4.2; 1G59; CE08031; WBGene00015633; WP:CE08031
                                              
Member of lists ( lists):
                                               mount08, R=0.21, Art-1-7,                                        
                                              GDPAPER-Prelim Mixed Muscle, josh laura1/2 common, JW                              
                                              Dauer Enriched AdjT0 vs AdjT12, Peter's All Muscle                                 
                                              Genes (1 16 01), Peter's Neuro (95; 06-18-01), Peter's                             
                                              Neuro (99; 06-18-01), Peter's UP-Reg Muscle (10 25 00),                            
                                              PJ No5 first 1500, PJRPAPER-Chromosome I Genes,                                    
                                              Proteome Cell Role (Oct 2000)- Genes of Unknown Ce,                                
                                              Proteome LG I [May 2002], Reinke et al 2004, list of                               
                                              genes in cluster order, rosetta, Valerie Reinke's 11927                            
                                              genes                                                                              

C09D4.3 C09D4.3 P W All gene names: C09D4.3; 1G57; CE27672; WBGene00015634; WP:CE27672 WormBase description: SER/THR protein kinase
                                              
Member of lists ( lists):
                                               mount04, R=0.41, male99,                                         
                                              Male-enriched, PJ 2378 IntestineMusclettest0.01, PJ                                
                                              4212 IntestineMuscleTtest0.05, PJRPAPER-Casein Kinases,                            
                                              PJRPAPER-Chromosome I Genes, PJRPAPER-Male Genes,                                  
                                              PJRPAPER-Muscle negative controls, PJRPAPER-Muslce (L1)                            
                                              negative controls-2, PJRPAPER-Serine/Threonine Kinases,                            
                                              PJRPAPER-Sperm Genes, Protein kinases, Proteome Cell                               
                                              Role (Oct 2000)- Signal Transduction, Proteome Funct                               
                                              Class (Mar 2000)-Protein Kinase, Proteome LG I [May                                
                                              2002], Reinke et al 2004, list of genes in cluster                                 
                                              order, rosetta, Sperm-enriched, Valerie Reinke's 11927                             
                                              genes, YK genes 95% different in muscle and intestin                               

C09E8.1 C09E8.1 P W All gene names: