Gene list file name: | ViswanathanM2005.Table1.txt |
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Type of gene identifier: | Cosmid name |
Description: | ViswanathanM et al 2005 Table1: Table 1. C. elegans pqn-Related Genes Regulated by Resveratrol Treatment and SIR-2.1 Overexpression |
Organism: | Caenorhabditis elegans (nematode) |
Gene list type: | Experimental |
Gene name Source Gene ID Annotation Date Added by
C03A7.14 C03A7.14 P W All gene names: abu-8; pqn-4; C03A7.14; 5F672; CE07872; NM_071992; WBGene00000031; WP:CE07872 WormBase description: abu-8 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-8 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-8 may help protect the organism from damage by improperly folded nascent protein.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 Fig6A Resveratrol
C03A7.4 C03A7.4 P W All gene names: pqn-5; C03A7.4; 5F633; CE07862; NM_071981; WBGene00004099; WP:CE07862 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes
C03A7.7 C03A7.7 P W All gene names: abu-6; pqn-6; C03A7.7; 5F636; CE07865; NM_071982; WBGene00000029; WP:CE07865 WormBase description: abu-6 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-6 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-6 may help protect the organism from damage by improperly folded nascent protein.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 Fig6A Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
C03A7.8 C03A7.8 P W All gene names: abu-7; pqn-7; C03A7.8; 5F638; CE07866; NM_071983; WBGene00000030; WP:CE07866 WormBase description: abu-7 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-7 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-7 may help protect the organism from damage by improperly folded nascent protein.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 Fig6A Resveratrol
F07H5.8 F07H5.8 P W All gene names: F07H5.8; 2J93; CE03157; WBGene00008559; WP:CE03157 WormBase description: keratin like
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
F10F2.9 F10F2.9 P W All gene names: pqn-29; F10F2.9; 3F730; CE00954; NM_065547; WBGene00004118; WP:CE00954 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F19G12.7 F19G12.7 P W All gene names: abu-2; pqn-30; F19G12.7; CE07090; NM_075864; WBGene00000025; WP:CE07090; XC24 WormBase description: abu-2 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-2 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-2 may help protect the organism from damage by improperly folded nascent protein.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 Fig6A Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
F31A3.1 F31A3.1 P W All gene names: abu-3; F31A3.1; CE07158; NM_078438; WBGene00000026; WP:CE07158; XS165 WormBase description: abu-3 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-3 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum (ER), and ABU-3 may function within the ER to protect the organism from damage by improperly folded nascent protein; abu-3 expression is enhanced in ER-stressed animals in which the unfolded protein response (UPR) is blocked by mutations in xbp-1, a bZIP transcription factor. WormBase CDS description: cys- and gln-rich protein
Member of lists (Publications lists):
ReichertK et al 2005 T3 xenobiotic downregulated, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 Fig6A Resveratrol, ViswanathanM et al 2005 S2 Resveratrol regulate WT
F35D11.2 F35D11.2 P W All gene names: pqn-35; F35D11.2; F35D11.2a.1; F35D11.2a.2; 2E915; CE31802; CE32647; NM_062416; NM_182111; WBGene00004122; WP:CE31802; WP:CE32647 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 S2 daf-16 Resveratrol
M02G9.2 M02G9.2 P W All gene names: M02G9.2; 2K611; CE37923; WBGene00010831; WP:CE37923
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
R09B5.5 R09B5.5 P W All gene names: pqn-54; R09B5.5; 5B943; CE12626; NM_071022; WBGene00004139; WP:CE12626 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 S2 Resveratrol regulate WT, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
T01D1.6 T01D1.6 P W All gene names: abu-11; pqn-61; T01D1.6; 2A484; CE28071; NM_061278; WBGene00000034; WP:CE28071 WormBase description: abu-11 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-11 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-11 may help protect the organism from damage by improperly folded nascent protein.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 Fig6A Resveratrol, ViswanathanM et al 2005 S2 daf-16 Resveratrol
T22B2.6 T22B2.6 P W All gene names: T22B2.6; CE13938; WBGene00020670; WP:CE13938; XE532
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 S2 daf-16 Resveratrol
W02A2.3 W02A2.3 P W All gene names: pqn-74; W02A2.3; W02A2.C; 4O94; CE21233; NM_070161; WBGene00004156; WP:CE21233 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Bishop et al 2004 T4 57 vhl-1 depend hif-1 indep, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 Fig6A Resveratrol
Y105C5A.3 Y105C5A.3 P W All gene names: pqn-76; Y105C5A.3; 4Q345; CE23185; NM_070471; WBGene00004158; WP:CE23185 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 S2 daf-16 Resveratrol
Y105C5A.4 Y105C5A.4 P W All gene names: abu-5; pqn-77; Y105C5A.4; 4Q355; CE23186; NM_070472; WBGene00000028; WP:CE23186 WormBase description: abu-5 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-5 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum (ER), and ABU-5 may function within the ER to protect the organism from damage by improperly folded nascent protein.
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 Fig6A Resveratrol, ViswanathanM et al 2005 S2 daf-16 Resveratrol
Y105C5A.5 Y105C5A.5 P W All gene names: pqn-78; Y105C5A.5; Y105C5A.D; 4Q356; CE23187; NM_070473; WBGene00004159; WP:CE23187 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0, Wang et al 2003 S4 LateList
Y73F8A.9 Y73F8A.9 P W All gene names: pqn-91; Y73F8A.9; 4Q59; CE25601; NM_070443; WBGene00004171; WP:CE25601 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 S2 daf-16 Resveratrol
ZK1067.7 ZK1067.7 P W All gene names: pqn-95; ZK1067.7; 2J516; CE03844; NM_063565; WBGene00004174; WP:CE03844 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, ViswanathanM et al 2005 T1 pqn genes, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0