Link et al 2003 T2 Abeta repressed, 11 genes

Gene list file name:Link2003.T2_Abeta_repressed.txt
Type of gene identifier:MA primer pair (sjj)
Description:Link et al 2003 Table2: Abeta repressed  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

C07A12.4 C07A12.4 P W All gene names: pdi-2; C07A12.4; C07A12.4a.1; C07A12.4a.2; CE03972; CE31878; NM_076377; NM_182439; WBGene00003963; WP:CE03972; WP:CE31878; XF145 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Link et al 2003  T2 Abeta repressed,                             
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster C, Roy et                              
                                              al 2002  S3 muscle genes, ViswanathanM et al 2005  S2                              
                                              UPR genes, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C18A11.7 C18A11.7 P W All gene names: dim-1; C18A11.7; C18A11.7b.1; C18A11.7b.2; C18A11.7b.3; C18A11.7b.4; CE04038; CE27706; WBGene00001000; WP:CE04038; WP:CE27706; XI670
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster C                                      

C50F2.6 C50F2.6 P W All gene names: dao-8; fkb-5; C50F2.6; C50F2.6a.1; C50F2.6a.2; 1E466; CE08912; CE27878; NM_058856; NM_058857; WBGene00001430; WP:CE08912; WP:CE27878 WormBase description: fkb-5 encodes a homolog of human FK506 binding protein 9.
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              Romagnolo et al 2002  Fig3b others, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S4                                    
                                              Climbing, Wang et al 2003  S3  genes pass one-way                                  
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

F16H6.1 F16H6.1 P W All gene names: clec-42; F16H6.1; 5S673; CE18597; WBGene00008891; WP:CE18597 WormBase description: Lectin C-type domain short and long forms, CUB domain
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Link et al 2003  T2 Abeta repressed,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F38B2.4 F38B2.4 P W All gene names: F38B2.4; F38B2.4.1; F38B2.4.2; CE02218; WBGene00009531; WP:CE02218; XL906 WormBase description: F38B2.4 is orthologous to the human gene ADENYLATE KINASE 1 (AK1; OMIM:103000), which when mutated leads to hemolytic anemia. WormBase CDS description: adenylate kinase
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster C,                                     
                                              Romagnolo et al 2002  Fig3b Metabolism, Wang et al 2003                            
                                               S4 Climbing, Wang et al 2003  S3  genes pass one-way                              
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

F40F4.2 F40F4.2 P W All gene names: lbp-2; F40F4.2; CE04532; NM_076157; WBGene00002254; WP:CE04532; XD881 WormBase description: lbp-2 encodes a homolog of the novel fatty acid binding protein, As-p18, found in the parasitic nematode Ascaris suum; As-p18 is a member of a family of small intracellular fatty acid binding proteins (iFABPs); the expression pattern of lpb-2 is consistent with it being secreted into the perienteric fluid where it may play a role in lipid transport beween the intestine and body wall; a lbp-2 promoter::gfp fusion reporter is restricted to body wall muscle cells abutting the pseudocoelom. WormBase CDS description: fatty acid-binding protein
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              Reinke et al 2004, mixed sperm soma, Reinke et al 2004,                            
                                              fem3 enriched genes, Roy et al 2002  S3 muscle genes,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F46E10.10 F46E10.10 P W All gene names: F46E10.10; F46E10.10b.1; F46E10.10b.2; F46E10.10c.1; F46E10.10c.2; F46E10.D; F46E10.I; 5G996; CE20820; CE33096; CE33097; WBGene00018491; WP:CE20820; WP:CE33096; WP:CE33097 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F53A9.10 F53A9.10 P W All gene names: tnt-2; F53A9.10; F53A9.10a.1; F53A9.10a.2; F53A9.10b.1; F53A9.10b.2; F53A9.10b.3; F53A9.10b.4; CE34313; CE34878; WBGene00006587; WP:CE34313; WP:CE34878; XJ340
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster C,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K10B3.7 K10B3.7 P W All gene names: gpd-3; K10B3.7; K10B3.7.1; K10B3.7.2; CE07370; NM_076133; WBGene00001685; WP:CE07370 WormBase description: gpd-3 encodes a predicted glyceraldehyde 3-phosphate dehydrogenase that affects embryonic viability; GPD-3 interacts with LIN-2 in two-hybrid assays.
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              Roy et al 2002  S3 muscle genes, ViswanathanM et al                                
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 LateList, Wang                             
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

T01D3.6 T01D3.6 P W All gene names: T01D3.6; 5O199; CE12964; CE18164; WBGene00011330; WP:CE12964; WP:CE18164 WormBase description: EGF-like domain, Fibrinogen beta and gamma chains, C-terminal globular domain
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T23F4.4 T23F4.4 P W All gene names: nas-27; T23F4.4; 2B464; CE36020; NM_061525; WBGene00003545; WP:CE36020 WormBase description: protease
                                              
Member of lists (Publications lists):
                                              Link et al 2003  T2 Abeta repressed,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster C,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated