Kwon et al 2004 T1 late-induction Ethanol-response, 58 genes

Gene list file name:Kwon2004.T1_Class2_late-induction_Ethanol-response
Type of gene identifier:MA primer pair (sjj)
Description:Kwon et al 2004 Table1: Class2 late-induction Ethanol-response  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AC3.7 AC3.7 P W All gene names: dod-15; ugt-1; AC3.7; 5K877; CE05137; NM_073270; WBGene00007072; WP:CE05137 WormBase description: UDP-glucuronosyltransferase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Murphy et al 2003  Fig2 Class1                                   
                                              elongate lifespan, ReichertK et al 2005  T1 xenobiotic                             
                                              induced UDP-gl, Reinke et al 2004, list of genes in                                
                                              cluster order, Reinke et al 2004, herm soma enriched                               
                                              genes, Reinke et al 2004, GO categories, Reinke et al                              
                                              2004, list of genes in cluster B, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

B0513.6 B0513.6 P W All gene names: B0513.6; 4O607; CE15562; WBGene00007198; WP:CE15562
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, herm sperm, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes                                                          

C01F6.8 C01F6.8 P W All gene names: icl-1; C01F6.8; 4J860; CE17360; CE30069; ICln; WBGene00002046; WP:CE17360; WP:CE30069 WormBase description: The icl-1 gene encodes, through alternative splicing, two alternative forms (ICL-1A, or 'IClnN1', and ICL-1B, or 'IClnN2'), with distinct electrophysiological properties, of an anion channel homolog. WormBase CDS description: nucleotide-sensitive chloride ion channel
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, fem1 enriched                                 
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Romagnolo et                             
                                              al 2002  Fig3b Transporters, ViswanathanM et al 2005                               
                                              S2 sir-2.1 regulated                                                               

C01G10.8 C01G10.8 P W All gene names: C01G10.8; C01G10.8.1; C01G10.8.2; 5P564; CE07817; WBGene00007235; WP:CE07817
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, ViswanathanM et al                               
                                              2005  S2 sir-2.1 regulated                                                         

C02B10.6 C02B10.6 P W All gene names: C02B10.6; 4F837; CE20481; WBGene00015331; WP:CE20481
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, GO categories, Reinke et al 2004, list of                                 
                                              genes in cluster D, Reinke et al 2004, shared sperm,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C03G6.14 C03G6.14 P W All gene names: cyp-35A1; C03G6.14; 5H838; CE36781; NM_072478; WBGene00015399; WP:CE36781
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ReichertK et al 2005 T1 xenobiotic                               
                                              induced P450, Reinke et al 2004, herm soma enriched                                
                                              genes                                                                              

C04F12.3 C04F12.3 P W All gene names: ikb-1; C04F12.3; 1K263; CE19676; NM_060174; WBGene00002069; WP:CE19676 WormBase description: ikb-1 encodes an ortholog of human BCL3 (OMIM:109560) that physically interacts with the checkpoint protein MRT-2; ikb-1(nr2019) and ikb-1(nr2027) mutants display no obvious phenotype other than shortened lifespan; mutation of BCL3 is frequently associated with recurring translocations found in the neoplastic cells of patients with chronic lymphocytic leukemia, and has been implicated in cell cycle control (perhaps via apoptosis). WormBase CDS description: Ank repeat
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order                                                                              

C06B3.6 C06B3.6 P W All gene names: C06B3.6; 5O390; CE07963; WBGene00007365; WP:CE07963
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C07A12.4 C07A12.4 P W All gene names: pdi-2; C07A12.4; C07A12.4a.1; C07A12.4a.2; CE03972; CE31878; NM_076377; NM_182439; WBGene00003963; WP:CE03972; WP:CE31878; XF145 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Link et al 2003  T2 Abeta repressed,                             
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster C, Roy et                              
                                              al 2002  S3 muscle genes, ViswanathanM et al 2005  S2                              
                                              UPR genes, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Climbing, Wang et al 2003                               
                                              S4 genes pass two-wayANOVA P0                                                      

C10H11.3 C10H11.3 P W All gene names: ugt-25; C10H11.3; 1F303; CE08092; WBGene00015692; WP:CE08092 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Reinke et al 2004, mixed sperm soma, Reinke                             
                                              et al 2004, GO categories, Reinke et al 2004, fem3                                 
                                              enriched genes                                                                     

C10H11.4 C10H11.4 P W All gene names: ugt-28; C10H11.4; 1F297; CE08093; WBGene00015693; WP:CE08093 WormBase description: 7TM chemoreceptor, ugt family
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C12D5.7 C12D5.7 P W All gene names: cyp-33A1; C12D5.7; 5I160; CE06809; NM_072587; WBGene00015709; WP:CE06809 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Kwon et al 2004 T1 late-induction                                          
                                              Ethanol-response, Menzel et al 2001  T3 CYP genes,                                 
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              Romagnolo et al 2002  Fig3b Oxidation                                              

C13G3.1 C13G3.1 P W All gene names: C13G3.1; 5L492; CE05277; WBGene00007553; WP:CE05277
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig4 Mount 15,                                  
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

C16A3.4 C16A3.4 P W All gene names: C16A3.4; 3H473; CE04004; WBGene00015809; WP:CE04004
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, ViswanathanM et al 2005  S2 sir-2.1                                    
                                              regulated                                                                          

C16C8.4 C16C8.4 P W All gene names: C16C8.4; 2D734; CE08215; WBGene00015842; WP:CE08215
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002   Fig3C                                          
                                              Germline-intrinsic, Reinke et al 2004, fem1 enriched                               
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, oogenesis enriched genes,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, ViswanathanM et al                            
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

C17E4.5 C17E4.5 P W All gene names: pab-3; C17E4.5; 1J998; CE08254; NM_060103; WBGene00003904; WP:CE08254 WormBase description: pab-3 is orthologous to human PABPN1 (OMIM:602279, mutated in oculopharyngeal muscular dystrophy). WormBase CDS description: RNA binding protein (RNP like)
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig3D Oocyte-en,                                
                                              McCarroll et al 2004  SFig5 conserved w/ yeast,                                    
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Reinke et al 2004, GO categories,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C17G10.4 C17G10.4 P W All gene names: cdc-14; C17G10.4; C17G10.4c.1; C17G10.4c.2; 2F878; CE06845; CE08287; CE08288; CE30868; CE36916; NM_062683; WBGene00000383; WP:CE06845; WP:CE08287; WP:CE08288; WP:CE30868; WP:CE36916; cdc14 WormBase description: cdc-14 encodes a dual-specificity phosphatase, homologous to Cdc14p in S. cerevisiae; CDC-14 localizes to the central spindle in anaphase and to the midbody in telophase, and is required for cytokinesis and embryonic viability.
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, fem1 enriched                                 
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C18H9.6 C18H9.6 P W All gene names: C18H9.6; 2G990; CE39324; WBGene00016004; WP:CE39324
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Dauer Enriched, Wang et al                              
                                              2003  S4 genes pass two-wayANOVA P0                                                

C23G10.1 C23G10.1 P W All gene names: C23G10.1; 3H301; CE27721; CE29587; WBGene00016010; WP:CE27721; WP:CE29587 WormBase description: Protein phosphatase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, herm sperm, Reinke                            
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes                                                          

C25A1.1 C25A1.1 P W All gene names: C25A1.1; 1K739; CE08366; WBGene00007705; WP:CE08366
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig1-4                                    
                                              conserved w/ Drosoph                                                               

C29F7.1 C29F7.1 P W All gene names: C29F7.1; CE08442; WBGene00007810; WP:CE08442; XO33
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig1 aging-regulated                            
                                              genes, Reinke et al 2004, herm soma enriched genes                                 

C30C11.4 C30C11.4 P W All gene names: C30C11.4; C30C11.4.1; C30C11.4.2; 3J534; CE00103; WBGene00016250; WP:CE00103 WormBase description: Msi3p
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, Kwon et al 2004 T1 late-induction                                     
                                              Ethanol-response, Lund et al 2002 Aging time course                                
                                              Fig2C heatshock, McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, intrinsic, Reinke et al                                
                                              2004, wt vs glp-4 enriched genes, Romagnolo et al 2002                             
                                              Fig2a heat shock, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated, ViswanathanM et al 2005  Fig6A Ethanol HS                               

C30E1.2 C30E1.2 P W All gene names: C30E1.2; CE08469; WBGene00016251; WP:CE08469; XR539
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated                                                                          

C31E10.7 C31E10.7 P W All gene names: C31E10.7; C31E10.7.1; C31E10.7.2; CE37487; WBGene00007848; WP:CE37487; XO621 WormBase description: C31E10.7 is orthologous to the human gene UNKNOWN (PROTEIN FOR MGC:10230) (CYB5; OMIM:250790), which when mutated leads to disease. WormBase CDS description: cytochrome b5
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

C33A12.3 C33A12.3 P W All gene names: C33A12.3; 4K278; CE05349; WBGene00007882; WP:CE05349
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, wt herm vs wt male                            
                                              enriched gen, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

C33F10.7 C33F10.7 P W All gene names: C33F10.7; C33F10.7b.1; C33F10.7b.2; 2F108; CE04140; CE37751; WBGene00016355; WP:CE04140; WP:CE37751 WormBase description: esterase and beta-lactamase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

C37A5.8 C37A5.8 P W All gene names: C37A5.8; 1O751; CE17532; WBGene00007992; WP:CE17532
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig4 Mount 15                                   

C37C3.10 C37C3.10 P W All gene names: C37C3.10; 5I340; CE06935; WBGene00016502; WP:CE06935
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 daf-16                               
                                              Resveratrol                                                                        

C37H5.2 C37H5.2 P W All gene names: C37H5.2; 5F327; CE30737; WBGene00016506; WP:CE30737
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig4 Mount 15,                                  
                                              Murphy et al 2003  Fig2 Class1 elongate lifespan,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

C37H5.3 C37H5.3 P W All gene names: C37H5.3; 5F325; CE08627; CE32824; WBGene00016507; WP:CE08627; WP:CE32824
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem3 enriched genes, Reinke                            
                                              et al 2004, IVb male soma enriched genes, Reinke et al                             
                                              2004, mixed sperm soma, ViswanathanM et al 2005  S2                                
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

C39E9.8 C39E9.8 P W All gene names: C39E9.8; 4N847; CE05391; CE27838; WBGene00008032; WP:CE05391; WP:CE27838
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated                                                                          

C47B2.8 C47B2.8 P W All gene names: prx-11; C47B2.8; 1N563; CE17569; NM_060872; WBGene00004196; WP:CE17569
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated                                                                          

C54D10.1 C54D10.1 P W All gene names: cdr-2; C54D10.1; 5M894; CE05497; NM_073713; WBGene00008296; WP:CE05497 WormBase description: glutathione S-transferase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Murphy et al 2003  Fig2 Class1                                   
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 TransientList, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

D1014.3 D1014.3 P W All gene names: phi-29; D1014.3; D1014.3.1; D1014.3.2; 5I613; CE38494; WBGene00017016; WP:CE38494 WormBase description: alpha-SNAP protein
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster A,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, wt herm vs wt male enriched gen,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

D2030.9 D2030.9 P W All gene names: D2030.9; D2030.9a.1; D2030.9a.2; 1I177; CE09086; CE23620; WBGene00008419; WP:CE09086; WP:CE23620 WormBase description: Lithosperm lec14B protein like
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated                                                                          

F01D5.10 F01D5.10 P W All gene names: F01D5.10; 2O306; CE18567; WBGene00008500; WP:CE18567
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F08B1.1 F08B1.1 P W All gene names: nrf-2; vhp-1; F08B1.1; F08B1.1a.1; F08B1.1a.2; F08B1.1a.3; F08B1.1c.1; F08B1.1c.2; F08B1.1c.3; 2F629; CE27918; CE27919; CE32357; NM_062596; NM_062597; NM_182126; WBGene00006923; WP:CE27918; WP:CE27919; WP:CE32357 WormBase description: protein tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Murphy et al 2003  Fig2 Class1                                   
                                              elongate lifespan, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

F08C6.6 F08C6.6 P W All gene names: F08C6.6; CE27925; WBGene00017244; WP:CE27925; XI186
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig1-4                                    
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, list of genes in                              
                                              cluster C, ViswanathanM et al 2005  S2 sir-2.1                                     
                                              regulated, Wang et al 2003  S4 Early genes, Wang et al                             
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0                                                         

F08F3.4 F08F3.4 P W All gene names: F08F3.4; 5F889; CE32856; WBGene00017262; WP:CE32856
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig1-4                                    
                                              conserved w/ Drosoph, Wang et al 2003  S4 Early genes,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

F08F3.7 F08F3.7 P W All gene names: ccp-14A5; cyp-14A5; F08F3.7; 5F900; CE09262; NM_072034; WBGene00000373; WP:CE09262 WormBase description: ccp-14A5 encodes a member of the cytochrome P450 family. WormBase CDS description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Menzel et al 2001  T3 CYP genes,                                 
                                              ReichertK et al 2005 T1 xenobiotic induced P450, Reinke                            
                                              et al 2004, fem3 enriched genes, Reinke et al 2004,                                
                                              mixed sperm soma, Reinke et al 2004, GO categories,                                
                                              Romagnolo et al 2002  Fig3b Oxidation, ViswanathanM et                             
                                              al 2005  S2 daf-16 Resveratrol, Wang et al 2003  S4                                
                                              TransientList, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

F08G2.5 F08G2.5 P W All gene names: F08G2.5; 2O122; CE19777; WBGene00008577; WP:CE19777
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, Jones et al 2001  Dauer specific genes                                
                                              P<0.05, Kwon et al 2004 T1 late-induction                                          
                                              Ethanol-response, ViswanathanM et al 2005  Fig6A                                   
                                              Ethanol HS, Wang et al 2003  S7 SAGE genes in the                                  
                                              dataset, Wang et al 2003  S8 SAGE genes in the dauer                               
                                              exit                                                                               

F08G2.6 F08G2.6 P W All gene names: ins-37; F08G2.6; 2O124; CE19778; NM_064501; WBGene00002120; WP:CE19778
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, spermatogenesis                               
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, shared sperm, ViswanathanM et al 2005  S2                                 
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F09E5.8 F09E5.8 P W All gene names: F09E5.8; 2F641; CE02615; WBGene00017286; WP:CE02615
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig5 conserved                            
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, ViswanathanM et al 2005  S2 sir-2.1 regulated                             

F18H3.3 F18H3.3 P W All gene names: pab-2; F18H3.3; F18H3.3a.1; F18H3.3a.2; F18H3.3a.3; F18H3.3a.4; CE02193; CE03230; NM_077858; NM_077859; WBGene00003903; WP:CE02193; WP:CE03230; XO142 WormBase description: pab-2 encodes a polyadenylate-binding protein 1 homolog with high similarity to human PABP 1. WormBase CDS description: RNA recognition motif. (aka RRM, RBD, or RNP domain) (4 domains)
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response                                                                   

F23B2.4 F23B2.4 P W All gene names: F23B2.4; 4J898; CE20709; NM_069190; WBGene00009074; WP:CE20709 WormBase description: WD domain, G-beta repeats
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, McCarroll et al 2004  SFig1-4                                    
                                              conserved w/ Drosoph, ViswanathanM et al 2005  S2                                  
                                              sir-2.1 regulated                                                                  

F23B2.6 F23B2.6 P W All gene names: aly-2; ref-2; F23B2.6; 4J913; CE09586; NM_069193; WBGene00000121; WP:CE09586 WormBase description: vimentin like
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, Fig2b shared gemlines, Reinke et al                             
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt males vs                            
                                              glp4 male enriched , Reinke et al 2004, wt herm vs wt                              
                                              male enriched gen, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

F25D1.5 F25D1.5 P W All gene names: F25D1.5; 5L26; CE05726; WBGene00009110; WP:CE05726 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: dehydrogenase
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response                                                                   

F30A10.5 F30A10.5 P W All gene names: stl-1; F30A10.5; F30A10.5.1; F30A10.5.2; 1K62; CE32397; NM_060116; WBGene00006061; WP:CE32397 WormBase description: erythrocyte band 7 integral membrane protein like
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Kwon et al 2004 T1 late-induction                                          
                                              Ethanol-response, Lund et al 2002   Fig3C                                          
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

F36F12.8 F36F12.8 P W All gene names: F36F12.8; 5C569; CE17788; WBGene00018099; WP:CE17788 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, fem1 enriched                                 
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Reinke et al                             
                                              2004, GO categories, Reinke et al 2004, list of genes                              
                                              in cluster E, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F41E6.6 F41E6.6 P W All gene names: tag-196; F41E6.6; F41E6.6.1; F41E6.6.2; 5J77; CE35305; WBGene00007055; WBGene00018287; WP:CE35305 WormBase description: cysteine protease and a protease inhibitor
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig1 aging-regulated                            
                                              genes, Lund et al 2002  Fig4 Mount 15, McCarroll et al                             
                                              2004  SFig1-4 conserved w/ Drosoph, Reinke et al 2004,                             
                                              list of genes in cluster A, Reinke et al 2004, list of                             
                                              genes in cluster order, ViswanathanM et al 2005  S2                                
                                              daf-16 Resveratrol, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F43A11.1 F43A11.1 P W All gene names: srx-88; F43A11.1; 5M63; CE05864; NM_073538; WBGene00005979; WP:CE05864 WormBase description: G-protein coupled receptor
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated                                                                          

F43E2.8 F43E2.8 P W All gene names: hsp-4; F43E2.8; F43E2.8.1; F43E2.8.2; 2H640; CE07244; NM_063135; WBGene00002008; WP:CE07244 WormBase description: hsp-4 encodes a predicted homolog of the mammalian ER chaperone BiP that affects embryonic and larval viability; expression is most prominent in the spermatheca and transcription of hsp-4 is induced in the gut and in the hypodermis upon ER stress. WormBase CDS description: heat shock protein
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Romagnolo et al 2002  Fig2a heat                                 
                                              shock, ViswanathanM et al 2005  S2 sir-2.1 regulated,                              
                                              ViswanathanM et al 2005  S2 UPR genes                                              

F43H9.4 F43H9.4 P W All gene names: F43H9.4; 5I507; CE27381; WBGene00018400; WP:CE27381
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Murphy et al 2003  Fig2 Class1                                   
                                              elongate lifespan, ViswanathanM et al 2005  S2 sir-2.1                             
                                              regulated                                                                          

F45E4.2 F45E4.2 P W All gene names: plp-1; F45E4.2; F45E4.2.1; F45E4.2.2; 4I399; CE10494; NM_068840; WBGene00004046; WP:CE10494 WormBase description: plp-1 encodes a protein containing three PUR repeats that are predicted to bind DNA/RNA and has similarity to the mammalian transcription factor pur alpha, and is required for embryonic development, development of the pharynx, and affects formation of the intestine; interacts with an Lef-1 site within the end-1 promoter and binding is regulated by phosphorylation
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, PAL-1 target genes,                             
                                              Kwon et al 2004 T1 late-induction Ethanol-response,                                
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Romagnolo et al 2002  Fig3b TF,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F47G4.1 F47G4.1 P W All gene names: F47G4.1; 1O646; CE18700; WBGene00009822; WP:CE18700
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response                                                                   

F52F12.7 F52F12.7 P W All gene names: F52F12.7; 1K507; CE10852; WBGene00009940; WP:CE10852 WormBase description: F52F12.7 is orthologous to the human gene STEROIDOGENIC ACUTE REGULATORY PROTEIN (STAR; OMIM:600617), which when mutated leads to disease. WormBase CDS description: steroidogenic acute regulatory protein like
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ViswanathanM et al 2005  S2 sir-2.1                              
                                              regulated                                                                          

F53A9.6 F53A9.6 P W All gene names: F53A9.6; F53A9.6.1; F53A9.6.2; CE02766; WBGene00018729; WP:CE02766; XJ332
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002  Fig1 aging-regulated                            
                                              genes, Reinke et al 2004, IVb male soma enriched genes,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F54C9.2 F54C9.2 P W All gene names: stc-1; F54C9.2; 2I854; CE32895; NM_063407; STCH; WBGene00006059; WP:CE32895 WormBase description: Heat shock 70Kd protein (HSP70)
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Lund et al 2002 Aging time course                                
                                              Fig2C heatshock, Romagnolo et al 2002  Fig2a heat                                  
                                              shock, ViswanathanM et al 2005  S2 sir-2.1 regulated