Romagnolo et al 2002 Fig3b Adhesion, 16 genes

Gene list file name:Romagnolo2002.Fig3b_16Adhesion.txt
Type of gene identifier:MA primer pair (sjj)
Description:Romagnolo et al 2002 Fig3b 16 Adhesion  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

C16A11.8 C16A11.8 P W All gene names: C16A11.8; 2E548; CE19358; WBGene00015821; WP:CE19358
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Adhesion                                 

C27C7.5 C27C7.5 P W All gene names: C27C7.5; 1M12; CE24813; WBGene00007768; WP:CE24813
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Adhesion                              

C30H6.1 C30H6.1 P W All gene names: C30H6.1; 4S297; CE15645; WBGene00007820; WP:CE15645 WormBase description: Lectin C-type domain short and long forms
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Adhesion                              

C45G7.5 C45G7.5 P W All gene names: cdh-10; C45G7.5; 4D204; CE38044; NM_067803; WBGene00000402; WP:CE38044 WormBase description: cdh-10 encodes a member of the cadherin superfamily.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Adhesion,                             
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

F08H9.9 R02D5.2 P W All gene names: clec-55; F08H9.9; 5O961; CE19781; WBGene00008597; WP:CE19781
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, Romagnolo et al 2002  Fig3b Adhesion,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F10C2.5 F10C2.5 P W All gene names: F10C2.5; CE09309; NM_073617; WBGene00008646; WP:CE09309 WormBase description: mannosyl-oligosaccharide alpha-1,2-mannosidase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Reinke et                            
                                              al 2004, GO categories, Romagnolo et al 2002  Fig3b                                
                                              Adhesion                                                                           

F25B4.9 F25B4.9 P W All gene names: clec-1; F25B4.9; 5G181; CE09627; NM_072099; WBGene00017772; WP:CE09627 WormBase description: 7TM chemoreceptor, clec family
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Romagnolo et al 2002  Fig3b Adhesion,                              
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F26A1.12 F26A1.12 P W All gene names: F26A1.12; 3F932; CE02680; WBGene00017810; WP:CE02680
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Adhesion,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F41A4.1 F41A4.1 P W All gene names: F41A4.1; 4B441; CE37517; WBGene00018256; WP:CE37517
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Murphy et al 2003  Fig2 Class2                               
                                              shorten lifespan, Romagnolo et al 2002  Fig3b Adhesion,                            
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

F49H6.1 F49H6.1 P W All gene names: F49H6.1; 5R489; CE18711; WBGene00009905; WP:CE18711 WormBase description: Lectin C-type domain short and long forms
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Adhesion,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

M162.6 M162.6 P W All gene names: M162.6; 5U249; CE18896; WBGene00010932; WP:CE18896
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Adhesion                              

R07C3.1 R07C3.1 P W All gene names: clec-43; R07C3.1; 2B235; CE38627; WBGene00019917; WP:CE38627 WormBase description: 7TM chemoreceptor, clec family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002 Fig5 genes in                                
                                              let-60 timecour, Romagnolo et al 2002  Fig3b Adhesion,                             
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T03G11.8 T03G11.8 P W All gene names: zig-6; T03G11.8; CE39763; NM_076481; WBGene00006983; WP:CE39763; XF804 WormBase description: zig-6 encodes a predicted membrane-associated protein containing two C2-type immunoglobulin domains and a GPI (glycosylated phosphatidylinositol) anchor site, but no transmembrane domain; ZIG-6 is predicted to function in cell adhesion and/or signaling, and as loss of zig-6 activity via RNA-mediated interference results in a Clear phenotype, zig-6 appears also to be required for maintenance of body fluid homeostasis; ZIG-6 is expressed in anterior and posterior body wall muscles. WormBase CDS description: human leukocyte surface protein (weak)
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Adhesion, Wang et al                            
                                              2003  S4 Early genes, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

T07H3.5 T07H3.5 P W All gene names: clec-20; T07H3.5; 2B878; CE19566; WBGene00020328; WP:CE19566 WormBase description: 7TM chemoreceptor, clec family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Adhesion,                             
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y102A5B.1 Y102A5B.1 P W All gene names: clec-27; Y102A5B.1; 5R335; CE35640; WBGene00013607; WP:CE35640 WormBase description: Lectin C-type domain short and long forms (2 domains)
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002  Fig3b Adhesion, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated                                                      

Y102A5C.7 Y102A5C.7 P W All gene names: Y102A5C.7; 5R411; CE20380; WBGene00013614; WP:CE20380 WormBase description: Lectin C-type domain
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Adhesion,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated