Romagnolo et al 2002 Fig3b Unkown, 409 genes

Gene list file name:Romagnolo2002.Fig3b_Unkown.txt
Type of gene identifier:MA primer pair (sjj)
Description:Romagnolo et al 2002 Fig3b Unkown  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

AC8.6 AC8.6 P W All gene names: AC8.6; CE23495; WBGene00007078; WP:CE23495; XA842
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

AH9.3 AH9.3 P W All gene names: AH9.3; CE39538; WBGene00014999; WP:CE39538; XC878
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0205.1 B0205.1 P W All gene names: B0205.1; 1L292; CE34238; CE36908; WBGene00015017; WP:CE34238; WP:CE36908
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Romagnolo et al 2002                               
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

B0207.10 B0207.10 P W All gene names: B0207.10; 1G534; CE39544; WBGene00015033; WP:CE39544
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown                                   

B0228.8 B0228.8 P W All gene names: B0228.8; 2I50; CE39885; WBGene00015065; WP:CE39885
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

B0238.4 B0238.4 P W All gene names: B0238.4; WBGene00043077
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

B0303.8 B0303.8 P W All gene names: sdz-1; B0303.8; 3J788; CE00001; WBGene00015129; WP:CE00001
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

B0393.4 B0393.4 P W All gene names: B0393.4; 3F850; CE00857; WBGene00007169; WP:CE00857
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, Romagnolo et al 2002  Fig3b Unkown,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0403.3 B0403.3 P W All gene names: B0403.3; CE38993; WBGene00015167; WP:CE38993; XH680
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0454.2 B0454.2 P W All gene names: sri-31; B0454.2; 2D341; CE07752; NM_062033; WBGene00005543; WP:CE07752 WormBase description: 7TM chemoreceptor, sri family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

B0491.8 C33B4.1 P W All gene names: ceclc-2; clh-2; B0491.8; C33B4.1; 2L659; CE02153; CE20461; CE27790; WBGene00000529; WP:CE02153; WP:CE20461; WP:CE27790 WormBase description: clh-2 encodes a chloride channel protein that is required for embryonic viability; may have two transcripts transcribed from alternative promoters, and the two transcripts might be expressed in different cell types.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

B0496.1 B0496.1 P W All gene names: B0496.1; 4I209; CE06713; WBGene00015210; WP:CE06713
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, wt herm vs wt herm enriched gen, Reinke et al                             
                                              2004, fem3 enriched genes, Reinke et al 2004, wt males                             
                                              vs glp4 male enriched , Reinke et al 2004, mixed sperm                             
                                              soma, Reinke et al 2004, list of genes in cluster D,                               
                                              Reinke et al 2004, GO categories, Romagnolo et al 2002                             
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

B0524.4 B0524.4 P W All gene names: B0524.4; B0524.B; 3C972; CE20466; WBGene00015243; WP:CE20466
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

B0546.4 B0546.4 P W All gene names: B0546.4; 4E148; CE16795; CE33354; WBGene00015251; WP:CE16795; WP:CE33354
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15,                                   
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order, Romagnolo                              
                                              et al 2002  Fig3b Unkown, Romagnolo et al 2002 Fig5                                
                                              genes in let-60 timecour, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

B0563.5 B0563.5 P W All gene names: B0563.5; CE39666; WBGene00015262; WP:CE39666; XJ765
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C01G10.9 C01G10.9 P W All gene names: C01G10.9; 5P563; CE07818; WBGene00007236; WP:CE07818 WormBase description: Initiation factor 2 subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster                               
                                              order, Reinke et al 2004, list of genes in cluster C,                              
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S4 Early                              
                                              genes, Wang et al 2003  S3  genes pass one-way ANOVA,                              
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

C01H6.9 C01H6.9 P W All gene names: C01H6.9; 1H806; CE07824; WBGene00007258; WP:CE07824 WormBase description: C01H6.9 encodes a homolog of haploid germ cell-specific nuclear protein kinase (haspin) that specifically binds GOA-1 in yeast two-hybrid assays; C01H6.9 is expressed in PHB sensory neurons and PVT interneurons in the tail, several unidentified neurons in the head (with projections to the nose and nerve ring), and intestinal cells, with mainly nuclear localization; C01H6.9 has no obvious function or phenotype in RNAi assays, either alone or with inactivation of a close paralog (F22H10.5). WormBase CDS description: Eukaryotic protein kinase domain
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, list of genes in cluster F, Reinke et al                               
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004,                               
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, Romagnolo et al 2002  Fig3b Unkown                                     

C03B1.6 C03B1.6 P W All gene names: C03B1.6; CE31874; WBGene00015377; WP:CE31874; XG969
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C03G6.7 C03G6.7 P W All gene names: srh-275; C03G6.7; 5H833; CE07881; NM_072475; WBGene00005480; WP:CE07881 WormBase description: 7TM chemoreceptor, srh family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C04B4.1 C04B4.1 P W All gene names: C04B4.1; CE05203; WBGene00007289; WP:CE05203; XM899
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C04F1.1 C04F1.1 P W All gene names: C04F1.1; 1G304; CE17364; WBGene00015442; WP:CE17364
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

C05D11.9 C05D11.9 P W All gene names: C05D11.9; 3H518; CE24787; WBGene00015486; WP:CE24787
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Romagnolo et                             
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C06B8.7 C06B8.7 P W All gene names: C06B8.7; 5P989; CE30854; WBGene00007372; WP:CE30854 WormBase description: Human M130 antigen like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

C09B8.5 C09B8.5 P W All gene names: C09B8.5; CE02465; WBGene00015624; WP:CE02465; XG640
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Romagnolo                             
                                              et al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

C09F12.2 C09F12.2 P W All gene names: C09F12.2; CE31409; WBGene00007482; WP:CE31409; XL675
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 daf-16 Resveratrol                                                  

C09G12.5 C09G12.5 P W All gene names: C09G12.5; 4E241; CE16839; WBGene00015655; WP:CE16839
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown                                          

C10A4.2 C10A4.2 P W All gene names: C10A4.2; CE02470; WBGene00015663; WP:CE02470; XI23
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C11D2.3 C11D2.3 P W All gene names: C11D2.3; 4G919; CE32307; WBGene00015701; WP:CE32307
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C13C12.2 C13C12.2 P W All gene names: C13C12.2; 5N4; CE08133; WBGene00007552; WP:CE08133
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

C14A11.3 C14A11.4 P W All gene names: tag-150; C14A11.3; CE08151; CE30861; WBGene00006496; WBGene00015749; WP:CE08151; WP:CE30861; XD417 WormBase description: guanine-nucleotide releasing factor
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, GO categories, Romagnolo et al 2002  Fig3b                             
                                              Unkown                                                                             

C14A4.8 C14A4.8 P W All gene names: C14A4.8; 2K888; CE02149; WBGene00007559; WP:CE02149
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, mixed sperm soma,                                
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              list of genes in cluster D, Reinke et al 2004, fem3                                
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C14B4.1 C14B4.1 P W All gene names: C14B4.1; 5T820; CE15616; WBGene00007582; WP:CE15616
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C14C6.12 C14C6.12 P W All gene names: C14C6.12; 5B48; CE35236; WBGene00015763; WP:CE35236
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 TransientList, Wang et al 2003  S3  genes                              
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C15F1.2 C15F1.H P W All gene names: C15F1.2; 2H277; CE23545; WBGene00015795; WP:CE23545
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

C17A2.4 C17A2.4 P W All gene names: C17A2.4; 2E127; CE08242; WBGene00015872; WP:CE08242
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C17B7.8 C17B7.8 P W All gene names: C17B7.8; 5D800; CE16856; WBGene00015882; WP:CE16856 WormBase description: C17B7.8 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; C17B7.8 has no clear orthologs in other organisms.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 TransientList, Wang et al 2003  S3  genes                              
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C17H12.8 C17H12.8 P W All gene names: C17H12.8; 4H583; CE19360; WBGene00015933; WP:CE19360
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              A, Reinke et al 2004, list of genes in cluster order,                              
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 Early genes,                               
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

C18D4.7 C18D4.7 P W All gene names: srz-57; C18D4.7; 5S23; NM_075042; WBGene00007676
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C18H9.2 C18H9.2 P W All gene names: C18H9.2; 2G979; CE01802; WBGene00016001; WP:CE01802
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C25F9.4 C25F9.4 P W All gene names: C25F9.4; 5T886; CE33975; WBGene00007724; WP:CE33975
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, Reinke et al 2004, list of genes in cluster B,                              
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol                                                        

C25H3.10 C25H3.10 P W All gene names: C25H3.10; 2F988; CE27090; CE37612; WBGene00016119; WP:CE27090; WP:CE37612
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Kwon et al 2004  T1 late-repression                                        
                                              Ethanol-respon, Reinke et al 2004, list of genes in                                
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, Romagnolo et                            
                                              al 2002 Fig5 genes in let-60 timecour, ViswanathanM et                             
                                              al 2005  S2 daf-16 Resveratrol, ViswanathanM et al 2005                            
                                               S2 sir-2.1 regulated, Wang et al 2003  S3  genes pass                             
                                              one-way ANOVA, Wang et al 2003  S8 SAGE genes in the                               
                                              dauer exit, Wang et al 2003  S7 SAGE genes in the                                  
                                              dataset, Wang et al 2003  S4 Dauer Enriched, Wang et al                            
                                              2003  S4 genes pass two-wayANOVA P0                                                

C26B9.2 C26B9.2 P W All gene names: C26B9.2; CE04096; WBGene00016132; WP:CE04096; XF959
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C26B9.3 C26B9.3 P W All gene names: C26B9.3; CE29187; WBGene00016133; WP:CE29187; XF957
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

C26E1.3 C26E1.3 P W All gene names: C26E1.3; 5N787; CE31885; WBGene00007749; WP:CE31885
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown                                      

C26F1.3 0C26F1.3 P W All gene names: C26F1.3; 5I259; CE06877; WBGene00016148; WP:CE06877
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, list of genes in cluster E, Romagnolo et al                               
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

C27F2.2 C27F2.2 P W All gene names: nca-2; C27F2.2; C27F2.3; 3G69; CE38941; NM_065653; WBGene00003558; WP:CE38941 WormBase description: nca-2 encodes a four-domain, voltage-gated ion channel; NCA-2 is required for normal rates of movement and may function with NCA-1, another voltage-gated ion channel, to regulate locomotion; NCA-2 is expressed in the nerve ring, ventral cord motorneurons, and a subset of tail neurons. WormBase CDS description: calcium channel subunit
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown                                                                             

C27H2.2 C27H2.2 P W All gene names: C27H2.2; 4O727; CE39327; WBGene00007782; WP:CE39327
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C28F5.1 C28F5.1 P W All gene names: C28F5.1; 2H797; CE01815; WBGene00016183; WP:CE01815
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, Romagnolo et al                            
                                              2002  Fig3b Unkown                                                                 

C28H8.8 C28H8.8 P W All gene names: C28H8.8; 3G976; CE38944; WBGene00016199; WP:CE38944
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C29E4.9 C29E4.9 P W All gene names: C29E4.9; 3J44; CE29199; WBGene00016206; WP:CE29199
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C29E6.4 C29E6.4 P W All gene names: C29E6.4; 4M645; CE05335; WBGene00007802; WP:CE05335
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C29G2.6 C29G2.6 P W All gene names: C29G2.6; 5D58; CE08467; WBGene00016234; WP:CE08467
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

C30G4.5 C30G4.5 P W All gene names: C30G4.5; CE06901; WBGene00016270; WP:CE06901; XR684
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C31E10.5 C31E10.5 P W All gene names: C31E10.5; CE08505; WBGene00007846; WP:CE08505; XO610
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Romagnolo                            
                                              et al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated, ViswanathanM et al 2005  S2 daf-16                              
                                              Resveratrol                                                                        

C31G12.4 C31G12.4 P W All gene names: C31G12.4; 5S654; CE15663; WBGene00007853; WP:CE15663
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Romagnolo et al                            
                                              2002  Fig3b Unkown                                                                 

C32F10.4 C32F10.4 P W All gene names: C32F10.4; C32F10.4.1; C32F10.4.2; 1G384; CE08541; WBGene00016332; WP:CE08541
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

C33C12.7 C33C12.7 P W All gene names: C33C12.7; 2C464; CE34729; WBGene00016339; WP:CE34729
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, Romagnolo et al                            
                                              2002  Fig3b Unkown                                                                 

C33D3.4 C33D3.4 P W All gene names: C33D3.4; CE02155; WBGene00007895; WP:CE02155; XL105
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C33F10.10 C33F10.10 P W All gene names: C33F10.10; WBGene00043172
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, spermatogenesis                                
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, shared sperm, Romagnolo et al 2002  Fig3b                                 
                                              Unkown, ViswanathanM et al 2005  S2 daf-16 Resveratrol                             

C34C6.7 C34C6.7 P W All gene names: C34C6.7; 2I997; CE03055; WBGene00007919; WP:CE03055
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Lund et al 2002  Fig4 Mount 15, Murphy et al                                
                                              2003  Fig2 Class1 elongate lifespan, Reinke et al 2004,                            
                                              fem3 enriched genes, Reinke et al 2004, mixed sperm                                
                                              soma, Romagnolo et al 2002  Fig3b Unkown, Wang et al                               
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              genes pass two-wayANOVA P0, Wang et al 2003  S4 Dauer                              
                                              Enriched                                                                           

C34H3.1 C34H3.C P W All gene names: tag-275; C34H3.1; CE35421; WBGene00016423; WP:CE35421; XG762
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Proteases,                            
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, ViswanathanM et al 2005  S2                            
                                              daf-16 Resveratrol, Wang et al 2003  S4 TransientList,                             
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

C35C5.8 C35C5.8 P W All gene names: C35C5.8; CE28208; CE34161; WBGene00007957; WP:CE28208; WP:CE34161; XM153
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C35C5.9 C35C5.9 P W All gene names: C35C5.9; CE31437; WBGene00007958; WP:CE31437; XM155
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

C36C5.12 C36C5.12 P W All gene names: C36C5.12; 5D632; CE08601; WBGene00016481; WP:CE08601
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C36C5.14 C36C5.14 P W All gene names: C36C5.14; 5D636; CE08603; WBGene00016483; WP:CE08603
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C37A2.6 C37A2.6 P W All gene names: C37A2.6; 1H362; CE08615; WBGene00016492; WP:CE08615
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C37A5.1 C37A5.1 P W All gene names: C37A5.1; C37A5.1.1; C37A5.1.2; 1O752; CE17528; WBGene00007988; WP:CE17528 WormBase description: Putative membrane protein
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C38D9.4 C38D9.4 P W All gene names: fbxa-133; C38D9.4; 5S63; CE19730; WBGene00008012; WP:CE19730
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Romagnolo et al 2002  Fig3b Unkown,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C39B10.3 C39B10.3 P W All gene names: C39B10.3; CE03079; WBGene00008023; WP:CE03079; XL63
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C40D2.1 C40D2.1 P W All gene names: math-19; C40D2.1; 2C289; CE19373; WBGene00016554; WP:CE19373
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C41D11.6 C41D11.6 P W All gene names: C41D11.6; 1F28; CE08663; WBGene00016565; WP:CE08663
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C42C1.12 C42C1.12 P W All gene names: C42C1.12; 4N46; CE16918; WBGene00016590; WP:CE16918
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C42C1.2 C42C1.2 P W All gene names: C42C1.2; 4N30; CE36275; WBGene00016580; WP:CE36275 WormBase description: protein phosphatase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

C43F9.5 C43F9.5 P W All gene names: C43F9.5; 4L354; CE19733; WBGene00008073; WP:CE19733
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C44B7.3 C44B7.3 P W All gene names: C44B7.3; 2H152; CE32328; WBGene00016625; WP:CE32328
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

C44C1.1 C44C1.1 P W All gene names: C44C1.1; CE35432; WBGene00016641; WP:CE35432; XB601
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

C44C10.10 C44C10.10 P W All gene names: C44C10.10; CE05417; WBGene00008090; WP:CE05417; XM305 WormBase description: DNA repair protein RECN like
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C45B11.4 C45B11.4 P W All gene names: srh-74; C45B11.4; 5L528; CE05428; NM_073412; WBGene00005295; WP:CE05428
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C45G7.3 C45G7.3 P W All gene names: C45G7.3; 4D229; CE24850; WBGene00016670; WP:CE24850
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004  T1 late-repression                               
                                              Ethanol-respon, Lund et al 2002  Fig4 Mount 15, Murphy                             
                                              et al 2003  Fig2 Class1 elongate lifespan, Romagnolo et                            
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

C45G9.2 C45G9.2 P W All gene names: C45G9.2; 3G159; CE29722; WBGene00016674; WP:CE29722 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 52% accuracy, to be mitochondrial.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McCarroll et al 2004  SFig5 conserved w/ yeast,                            
                                              McCarroll et al 2004  SFig1-4 conserved w/ Drosoph,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, list of genes in                             
                                              cluster E, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C49A9.3 C49A9.3 P W All gene names: C49A9.3; 4G989; CE31451; WBGene00016757; WP:CE31451
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

C49A9.9 C49A9.4 P W All gene names: C49A9.9; 4G983; CE27112; CE33570; WBGene00016763; WP:CE27112; WP:CE33570
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, herm soma enriched                               
                                              genes, Reinke et al 2004, list of genes in cluster B,                              
                                              Romagnolo et al 2002  Fig3b Unkown, Wang et al 2003  S4                            
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

C50E10.2 C50E10.2 P W All gene names: C50E10.2; 2M596; CE36805; WBGene00016826; WP:CE36805
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, list of genes in cluster D, Reinke et al 2004,                               
                                              fem3 enriched genes, Romagnolo et al 2002  Fig3b Unkown                            

C50H11.3 C50H11.3 P W All gene names: srt-71; C50H11.3; 5D555; CE39569; NM_071442; WBGene00016851; WP:CE39569 WormBase description: 7TM chemoreceptor, srt family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

C50H11.4 C50H11.4 P W All gene names: srt-7; C50H11.4; 5D553; CE08920; NM_071441; WBGene00016852; WP:CE08920 WormBase description: 7TM chemoreceptor, srt family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

C53D5.2 C53D5.G P W All gene names: C53D5.2; 1A759; CE34279; WBGene00016903; WP:CE34279
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

C54F6.5 C54F6.5 P W All gene names: C54F6.5; 5I7; CE39707; WBGene00016923; WP:CE39707
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

C55A6.2 C55A6.2 P W All gene names: C55A6.2; 5L991; CE29733; WBGene00008331; WP:CE29733 WormBase description: Human KIAA0173 protein like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, list of genes in cluster E, Romagnolo et al                               
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, Wang et al 2003  S4 TransientList, Wang et                              
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 genes pass two-wayANOVA P0                                                      

CD4.8 CD4.8 P W All gene names: CD4.8; 5G80; CE16956; WBGene00016993; WP:CE16956
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

D2045.9 D2045.9 P W All gene names: D2045.9; CE33988; WBGene00008426; WP:CE33988
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

D2089.5 D2089.5 P W All gene names: gbh-1; D2089.5; 2K982; CE00940; NM_063904; WBGene00001522; WP:CE00940 WormBase description: gbh-1 encodes a predicted ortholog of human hBBOX1; expressed in the intestine and in head and body muscles. WormBase CDS description: gamma-butyrobetaine,2-oxoglutarate dioxygenase
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b Unkown,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

DC2.2 DC2.2 P W All gene names: srh-78; DC2.2; 5A697; CE20631; NM_070755; WBGene00005299; WP:CE20631 WormBase description: 7TM chemoreceptor, srh family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

E02H1.6 E02H1.6 P W All gene names: E02H1.6; 2J887; CE28286; WBGene00008458; WP:CE28286 WormBase description: ATP binding protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes,                                     
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

E02H4.4 E02H4.4 P W All gene names: E02H4.4; CE05550; WBGene00008462; WP:CE05550; XO879
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Reinke et al 2004, herm soma enriched                                
                                              genes, Romagnolo et al 2002  Fig3b Unkown, Romagnolo et                            
                                              al 2002 Fig5 genes in let-60 timecour, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

E02H9.3 E02H9.3 P W All gene names: E02H9.3; E02H9.3b.1; E02H9.3b.2; 3D553; CE37218; CE37219; WBGene00017101; WP:CE37218; WP:CE37219
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated, Wang et al 2003  S4                              
                                              Early genes, Wang et al 2003  S3  genes pass one-way                               
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

E03A3.6 E03A3.6 P W All gene names: unc-79; E03A3.6; 3F171; CE30742; NM_065413; WBGene00006811; WP:CE30742 WormBase description: A novel protein involved in responsiveness to volatile anesthetics; it is expressed primarily in the nervous system.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 daf-16 Resveratrol                                                  

E03H12.6 E03H12.6 P W All gene names: srz-24; E03H12.6; 4F744; CE09145; CE34790; WBGene00017113; WP:CE09145; WP:CE34790 WormBase description: 7TM chemoreceptor, srz family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005 S2 Resveratrol regulate WT                                 

EGAP9.2 EGAP9.2 P W All gene names: CE2FT-1; fut-2; EGAP9.2; 5H52; CE09151; NM_072270; WBGene00001506; WP:CE09151 WormBase description: fut-2 encodes a unique alpha 1,2-fucosyltransferase specifically expressed in intestinal cells of larval and adult animals; recombinant FUT-2 expressed in human 293T cells exhibits a novel acceptor specificity profile compared with mammalian alpha 1,2-fucosyltransferases and the predicted protein shares very low amino acid identity with human alpha 1,2-fucosyltransferases, but its predicted type 2 topology and domain structure are typical of other glucosyltransferases.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

F01D5.10 0F01D5.10 P W All gene names: F01D5.10; 2O306; CE18567; WBGene00008500; WP:CE18567
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Reinke et al 2004, list of genes in                              
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F02D10.4 F02D10.4 P W All gene names: F02D10.4; CE03139; WBGene00008525; WP:CE03139; XO76
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F08B4.1 H23L24.C P W All gene names: dic-1; F08B4.1; 4J459; CE30074; CE37220; WBGene00000994; WP:CE30074; WP:CE37220 WormBase description: dic-1 encodes an ortholog of Drosophila CG3125 and human DEAD/H BOX 26 (DDX26, DICE-1; OMIM:604331; nuclear protein, lost or downregulated in nonsmall cell lung carcinomas); DIC-1 and its orthologs have an N-terminal von Willebrand factor (vWF) type A domain; DIC-1 is required for embryonic development and normal locomotion.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, list of genes in                                  
                                              cluster E, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F08E10.7 F08E10.7 P W All gene names: F08E10.7; 5R961; CE18577; WBGene00008575; WP:CE18577
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown, Wang et al                              
                                              2003  S4 Climbing, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

F09A5.3 F09A5.3 P W All gene names: F09A5.3; CE03175; WBGene00008600; WP:CE03175; XN771
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F09B9.4 F09B9.4 P W All gene names: F09B9.4; CE37344; WBGene00008603; WP:CE37344; XK779
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, wt herm vs wt herm enriched                              
                                              gen, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                              
                                              et al 2005  S2 sir-2.1 regulated                                                   

F09D12.2 F09D12.2 P W All gene names: F09D12.2; 4E208; CE16972; WBGene00017281; WP:CE16972 WormBase description: F09D12.2 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F09D12.2 has no clear orthologs in other organisms.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour                                 

F10B5.2 F10B5.2 P W All gene names: F10B5.2; 2I437; CE01544; WBGene00008639; WP:CE01544
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt herm vs wt male enriched gen, Romagnolo                             
                                              et al 2002  Fig3b Unkown                                                           

F11A1.2 F11A1.2 P W All gene names: F11A1.2; CE03180; WBGene00008668; WP:CE03180; XL274
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F11C1.1 F11C1.1 P W All gene names: F11C1.1; CE03186; WBGene00008690; WP:CE03186; XN606
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Romagnolo et al 2002  Fig3b Unkown,                                        
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S6 removed genes of contamination, Wang et al                             
                                              2003  S7 SAGE genes in the dataset, Wang et al 2003  S8                            
                                              SAGE genes in the dauer exit                                                       

F12D9.1 F12D9.1 P W All gene names: F12D9.1; CE02633; CE30947; WBGene00017400; WP:CE02633; WP:CE30947; XJ260
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F13A7.7 F13A7.7 P W All gene names: F13A7.7; 5Q860; CE19789; WBGene00008725; WP:CE19789
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, fem3 enriched genes, Reinke et al 2004, wt                                
                                              males vs glp4 male enriched , Reinke et al 2004, mixed                             
                                              sperm soma, Reinke et al 2004, list of genes in cluster                            
                                              D, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated                                                      

F13B9.2 F13B9.2 P W All gene names: F13B9.2; CE04379; WBGene00017420; WP:CE04379; XI905
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown                                      

F13C5.6 F13C5.7 P W All gene names: gei-10; F13C5.6; CE27424; CE29760; NM_171612; NM_171939; WBGene00001567; WP:CE27424; WP:CE29760; XB230 WormBase description: gei-10 encodes a novel protein conserved with C. briggsae BP:CBP01944 that interacts with GEX-3 in yeast two-hybrid assays.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F13G3.3 F13G3.3 P W All gene names: F13G3.3; 1H874; CE27124; WBGene00008763; WP:CE27124
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

F14F7.5 F14F7.5 P W All gene names: F14F7.5; 3O125; CE15825; WBGene00008812; WP:CE15825
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F14H12.2 F14H12.2 P W All gene names: F14H12.2; CE07062; WBGene00017470; WP:CE07062; XE969
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F15A8.7 F15A8.7 P W All gene names: F15A8.7; CE35486; WBGene00017479; WP:CE35486; XF62
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F15D4.5 F15D4.5 P W All gene names: F15D4.5; 2N537; CE36131; WBGene00008862; WP:CE36131
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F15E11.11 F15E11.11 P W All gene names: F15E11.11; 5C811; CE17008; WBGene00017497; WP:CE17008
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 TransientList, Wang et al 2003  S3  genes                              
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F15E11.4 F15E11.4 P W All gene names: F15E11.4; 5C816; CE17002; WBGene00017493; WP:CE17002
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F15H9.2 F15H9.2 P W All gene names: sri-15; F15H9.2; 1M742; CE20687; NM_060671; WBGene00005527; WP:CE20687 WormBase description: 7TM chemoreceptor, sri family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F16B12.1 F16B12.1 P W All gene names: F16B12.1; CE35488; WBGene00008879; WP:CE35488; XO707 WormBase description: C1R/C1S-like domain
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F16G10.11 F16G10.11 P W All gene names: F16G10.11; 2C682; CE19400; WBGene00017526; WP:CE19400
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F16G10.7 F16G10.7 P W All gene names: F16G10.7; 2C668; CE19396; WBGene00017522; WP:CE19396
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F18C12.3 F18C12.3 P W All gene names: F18C12.3; F18C12.3.1; F18C12.3.2; 1I673; CE15869; WBGene00008934; WP:CE15869
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt male                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F18E9.4 F18E9.4 P W All gene names: F18E9.4; CE02661; WBGene00017570; WP:CE02661; XJ201
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F18G5.6 F18G5.6 P W All gene names: F18G5.6; CE04414; WBGene00017582; WP:CE04414; XJ880
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F20A1.6 F20A1.6 P W All gene names: F20A1.6; 5H506; CE29766; CE37002; WBGene00017618; WP:CE29766; WP:CE37002
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T3 20 most abundant                             
                                              Dauer, Romagnolo et al 2002  Fig3b Unkown, Wang et al                              
                                              2003  S8 SAGE genes in the dauer exit                                              

F20B4.7 F20B4.7 P W All gene names: F20B4.7; WBGene00017626; XS300
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F20E11.3 F20E11.3 P W All gene names: srh-160; F20E11.3; 5R927; NM_075013; WBGene00005376
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F20H11.5 F27B3.5 P W All gene names: F20H11.5; 3H675; CE09514; WBGene00017648; WP:CE09514 WormBase description: D-amino acid oxidase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt male                               
                                              enriched gen, Reinke et al 2004, GO categories, Reinke                             
                                              et al 2004, herm soma enriched genes, Romagnolo et al                              
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

F21A10.1 F21A10.1 P W All gene names: F21A10.1; CE18623; WBGene00008998; WP:CE18623; XK795 WormBase description: EF hand (2 domains)
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F21A10.3 F21A10.3 P W All gene names: F21A10.3; WBGene00043272
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F21A3.1 F21A3.1 P W All gene names: srh-276; F21A3.1; 5Q5; CE09515; NM_074462; WBGene00005481; WP:CE09515
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F21A3.6 F21A3.6 P W All gene names: F21A3.6; 5Q24; CE34541; WBGene00008996; WP:CE34541 WormBase description: globin like
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F21D12.1 F21D12.1 P W All gene names: nhr-21; nhr-21a; nhr-21b; F21D12.1; F21D12.1c.1; F21D12.1c.2; 2H637; CE20706; CE27988; CE33375; CE33377; CE39353; WBGene00003620; WP:CE20706; WP:CE27988; WP:CE33375; WP:CE33377; WP:CE39353 WormBase description: modulating N-terminal of steroid/thyroid/retinoic nuclear hormone receptors
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F21G4.5 F21G4.5 P W All gene names: F21G4.5; CE09551; WBGene00009026; WP:CE09551; XK527
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, Wang et al                              
                                              2003  S4 Early genes, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

F22A3.5 F22A3.4 P W All gene names: ceh-60; F22A3.5; CE38506; WBGene00017690; WP:CE38506; XH142 WormBase description: homeotic protein PBX2
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, GO categories, Reinke                            
                                              et al 2004, herm soma enriched genes, Reinke et al                                 
                                              2004, list of genes in cluster B, Romagnolo et al 2002                             
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

F22B7.9 F22B7.9 P W All gene names: F22B7.9; 3J742; CE29771; WBGene00017698; WP:CE29771
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Kwon et al 2004  T1 late-repression                                        
                                              Ethanol-respon, Lund et al 2002  Fig4 Mount 15,                                    
                                              Romagnolo et al 2002  Fig3b Unkown, Romagnolo et al                                
                                              2002 Fig5 genes in let-60 timecour, Wang et al 2003  S3                            
                                               genes pass one-way ANOVA, Wang et al 2003  S8 SAGE                                
                                              genes in the dauer exit, Wang et al 2003  S7 SAGE genes                            
                                              in the dataset, Wang et al 2003  S4 Dauer Enriched,                                
                                              Wang et al 2003  S4 genes pass two-wayANOVA P0                                     

F23F12.8 F23F12.7 P W All gene names: F23F12.8; 3H575; CE38952; WBGene00017754; WP:CE38952
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F25A2.1 F25A2.1 P W All gene names: F25A2.1; 5B659; CE09618; WBGene00017764; WP:CE09618
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F25D1.3 F25D1.3 P W All gene names: F25D1.3; 5L9; CE31917; WBGene00009108; WP:CE31917
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

F25G6.1 H20H17.1 P W All gene names: F25G6.1; 5J59; CE32877; WBGene00017796; WP:CE32877
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

F25H8.2 F25H8.2 P W All gene names: F25H8.2; F25H8.2.1; F25H8.2.2; 4K697; CE05728; WBGene00009132; WP:CE05728
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Romagnolo et al 2002                              
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

F26A1.7 F26A1.7 P W All gene names: F26A1.7; 3F904; CE02688; WBGene00017805; WP:CE02688
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F26D2.13 F26D2.13 P W All gene names: F26D2.13; 5Q916; CE18643; WBGene00009151; WP:CE18643
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F27C8.2 F27C8.2 P W All gene names: F27C8.2; 4K365; CE32882; WBGene00009183; WP:CE32882
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F27D4.4 F27D4.4 P W All gene names: F27D4.4; 1I303; CE36141; WBGene00009189; WP:CE36141 WormBase description: Yeast hypothetical protein YOR316OW like
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, mixed oogenesis soma, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Reinke et al 2004, GO                                
                                              categories, Romagnolo et al 2002  Fig3b Unkown,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F28D1.8 F28D1.8 P W All gene names: F28D1.8; 4N152; CE28551; WBGene00009217; WP:CE28551
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, fem3 enriched genes, Romagnolo et al                            
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

F29B9.10 F29B9.10 P W All gene names: F29B9.10; 4F422; CE09788; WBGene00017924; WP:CE09788
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F31D5.6 F31D5.6 P W All gene names: F31D5.6; 2E501; CE19829; WBGene00017949; WP:CE19829 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F31F4.5 F31F4.5 P W All gene names: F31F4.5; WBGene00017958; WBGene00043301
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F32B4.8 F32B4.8 P W All gene names: F32B4.8; 1M99; CE37107; WBGene00009318; WP:CE37107
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F32B6.11 F32B6.11 P W All gene names: F32B6.11; 5L387; CE20744; WBGene00009325; WP:CE20744
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F33D4.5 F33D4.5 P W All gene names: F33D4.5; F33D4.5.1; F33D4.5.2; 4I472; CE29308; WBGene00017997; WP:CE29308
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, wt herm vs wt                             
                                              male enriched gen, Reinke et al 2004, herm soma                                    
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F33H12.1 F33H12.1 P W All gene names: F33H12.1; 2C891; CE17038; WBGene00018019; WP:CE17038
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F33H12.5 F33H12.5 P W All gene names: sri-36; F33H12.5; 2C870; CE25868; NM_061899; WBGene00005548; WP:CE25868 WormBase description: 7TM chemoreceptor, sri family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown                                          

F33H12.6 F33H12.6 P W All gene names: F33H12.6; 2C878; CE17043; WBGene00018020; WP:CE17043
                                              
Member of lists (Publications lists):
                                              GuhaThakurta et al 2002  T1 upregu on                             
                                              heat stress, Romagnolo et al 2002  Fig3b Unkown,                                   
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F33H2.6 F33H2.6 P W All gene names: F33H2.6; 1P608; CE30528; WBGene00009369; WP:CE30528
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F35B3.1 F35B3.1 P W All gene names: F35B3.1; CE07168; WBGene00018028; WP:CE07168; XR631
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F35C12.3 F35C12.3 P W All gene names: F35C12.3; F35C12.3b.1; F35C12.3b.2; 1K386; CE09915; CE38339; CE38340; WBGene00009408; WP:CE09915; WP:CE38339; WP:CE38340
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA, Wang et al 2003  S4                            
                                              Dauer Enriched, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0                                                                    

F35E8.13 F35E8.13 P W All gene names: F35E8.13; 5Q407; WBGene00009424
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F36D1.7 F36D1.7 P W All gene names: F36D1.7; 1L855; CE18668; WBGene00009466; WP:CE18668
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, wt herm vs wt herm enriched gen,                                
                                              Reinke et al 2004, fem3 enriched genes, Romagnolo et al                            
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 daf-16                             
                                              Resveratrol                                                                        

F36G3.2 F36G3.2 P W All gene names: F36G3.2; CE01577; WBGene00009483; WP:CE01577; XK412
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F36G9.14 F36G9.14 P W All gene names: fbxa-99; F36G9.14; 5Q458; CE15991; WBGene00009490; WP:CE15991 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, McElwee et al 2003  T1 targets of daf-16,                                  
                                              Romagnolo et al 2002  Fig3b Unkown                                                 

F36H12.14 F36H12.14 P W All gene names: F36H12.14; 4G28; CE09984; WBGene00018127; WP:CE09984
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, spermatogenesis                                
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, shared sperm, Romagnolo et al 2002  Fig3b                                 
                                              Unkown, Romagnolo et al 2002 Fig5 genes in let-60                                  
                                              timecour, ViswanathanM et al 2005  S2 sir-2.1 regulated                            

F37A8.4 F37A8.4 P W All gene names: nlp-10; F37A8.4; 3F24; CE00989; NM_065394; WBGene00003748; WP:CE00989 WormBase description: nlp-10 encodes four predicted neuropeptide-like proteins; nlp-10 is part of a GGxY neuropeptide family that has members in several other nematode species; nlp-10 is expressed in a variety of neurons, including ASK, ADL, CAN, two lateral neurons, two anterior pharyngeal neurons, one tail neuron, and one male tail neuron; as loss of nlp-10 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of nlp-10-encoded peptides in development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F38E1.2 F38E1.2 P W All gene names: F38E1.2; 5I861; WBGene00018177
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F38E1.9 F38E1.9 P W All gene names: F38E1.9; 5I838; CE04527; WBGene00018181; WP:CE04527
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

F39B3.2 F39B3.2 P W All gene names: F39B3.2; CE30978; WBGene00018191; WP:CE30978; XS184
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

F40D4.13 F40D4.13 P W All gene names: F40D4.13; 5R632; CE19847; WBGene00009572; WP:CE19847
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F40F4.1 F40F4.1 P W All gene names: fbxb-71; F40F4.1; CE04531; WBGene00018236; WP:CE04531; XD883 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Romagnolo et al 2002  Fig3b Unkown, Romagnolo                            
                                              et al 2002 Fig5 genes in let-60 timecour, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

F40G12.6 F40G12.6 P W All gene names: F40G12.6; 5O752; CE10186; WBGene00009601; WP:CE10186
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F41C3.1 F41C3.1 P W All gene names: F41C3.1; 2F43; CE02728; WBGene00018267; WP:CE02728
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F41C3.11 F41C3.11 P W All gene names: F41C3.11; 2F24; CE37372; WBGene00018275; WP:CE37372
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown, Wang et                             
                                              al 2003  S5 genes common to feeding ANOVA, Wang et al                              
                                              2003  S3  genes pass one-way ANOVA                                                 

F41C3.7 F41C3.7 P W All gene names: F41C3.7; 2F25; CE39935; WBGene00018273; WP:CE39935
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

F42A6.2 F42A6.2 P W All gene names: F42A6.2; 4E105; CE17054; WBGene00018324; WP:CE17054
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown                                          

F42A6.8 F42A6.8 P W All gene names: fbxa-130; F42A6.8; 4E104; CE17060; WBGene00018329; WP:CE17060
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

F44D12.5 F44D12.5 P W All gene names: F44D12.5; 4K795; WBGene00009682
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F44D12.8 F44D12.8 P W All gene names: F44D12.8; 4K789; CE03331; WBGene00009685; WP:CE03331
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, Reinke et al 2004, list of genes in cluster                              
                                              order, Reinke et al 2004, spermatogenesis enriched                                 
                                              genes, Reinke et al 2004, fem3 enriched genes, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt males vs glp4 male enriched , Reinke et al                                
                                              2004, list of genes in cluster D, Reinke et al 2004,                               
                                              shared sperm, Romagnolo et al 2002  Fig3b Unkown                                   

F44E7.3 F44E7.3 P W All gene names: F44E7.3; 5G253; CE10400; WBGene00018425; WP:CE10400
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F44E7.9 F44E7.9 P W All gene names: F44E7.9; 5G271; CE10396; WBGene00018431; WP:CE10396
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

F45D3.4 F45D3.4 P W All gene names: F45D3.4; 5N32; CE10474; CE38518; WBGene00009724; WP:CE10474; WP:CE38518
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Romagnolo et al 2002  Fig3b Unkown,                             
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              Shen et al 2005  T1 hif-1indepen hypoxia, ViswanathanM                             
                                              et al 2005  S2 sir-2.1 regulated                                                   

F46B3.2 F46B3.2 P W All gene names: F46B3.2; 5V66; CE18685; WBGene00009757; WP:CE18685
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F46F6.3 F46F6.3 P W All gene names: F46F6.3; CE02236; WBGene00009794; WP:CE02236
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Romagnolo et al                            
                                              2002  Fig3b Unkown                                                                 

F47B10.9 F47B10.9 P W All gene names: F47B10.9; CE03359; WBGene00009820; WP:CE03359; XL530
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, mixed oogenesis soma, Romagnolo et                              
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated, Wang et al 2003  S5 genes common to                             
                                              feeding ANOVA, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA                                                                              

F47B8.4 F47B8.4 P W All gene names: F47B8.4; 5O804; CE10638; WBGene00009805; WP:CE10638
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Romagnolo et al 2002  Fig3b Unkown,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F47C12.3 F47C12.3 P W All gene names: srh-223; F47C12.3; 4E745; CE17836; NM_068052; WBGene00005433; WP:CE17836 WormBase description: 7TM chemoreceptor, srh family
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Romagnolo et al 2002  Fig3b Unkown,                             
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F47G3.1 F47G3.4 P W All gene names: F47G3.1; F47G3.4; CE29327; WBGene00018576; WP:CE29327; XD11
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated, ViswanathanM et al                               
                                              2005  S2 daf-16 Resveratrol                                                        

F47H4.10 F47H4.10 P W All gene names: skr-5; F47H4.10; 5R829; CE20827; NM_074992; WBGene00004811; WP:CE20827 WormBase description: The skr-5 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-5(RNAi) animals are at least superficially normal.
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Murphy                            
                                              et al 2003  Fig2 Class1 elongate lifespan, Romagnolo et                            
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              daf-16 Resveratrol                                                                 

F47H4.2 F47H4.2 P W All gene names: F47H4.2; 5R839; CE37016; WBGene00009835; WP:CE37016 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

F47H4.8 F47H4.8 P W All gene names: F47H4.8; F47H4.D; 5R824; CE20825; WBGene00009839; WP:CE20825 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F49F1.10 F49F1.10 P W All gene names: F49F1.10; 4E900; CE17093; WBGene00018650; WP:CE17093
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

F49H6.9 F49H6.9 P W All gene names: srz-92; F49H6.9; 5R507; NM_074912; WBGene00009910
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F53A10.2 F53A10.1 P W All gene names: F53A10.2; 2B519; CE24996; CE32671; CE37020; WBGene00018734; WP:CE24996; WP:CE32671; WP:CE37020 WormBase description: F53A10.2 encodes a Rap1GAP homolog; a region of F53A10.2 encompassing one GoLoco motif specifically binds GOA-1 in yeast two-hybrid assays, and also binds itself; F53A10.2 is expressed in hypodermal seam cells, various neurons, and intestinal cells; F53A10.2 has no obvious function or phenotype in RNAi assays, whether in a normal background or in goa-1(-) or goa-1(gf) mutant backgrounds.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

F53F4.7 F53F4.7 P W All gene names: F53F4.7; 5O94; CE10966; WBGene00009990; WP:CE10966
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F55G11.1 F55G11.1 P W All gene names: F55G11.1; 4N708; CE19899; WBGene00010122; WP:CE19899
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F56A4.A F56A4.A P W
                                              
Member of lists (Publications lists):
  Romagnolo et al 2002  Fig3b Unkown                             

F56B6.2 F56B6.3 P W All gene names: rgs-7; F56B6.2; CE29403; CE29404; CE30151; CE39019; NM_076209; WBGene00004350; WBGene00018936; WP:CE29403; WP:CE29404; WP:CE30151; WP:CE39019; XE175 WormBase description: F56B6.2 encodes three isoforms of an atypical regulator of G protein signaling (RGS) protein that contains both a C2 and an RGS domain, and that binds EGL-30 via both domains, similar in organization to mammalian PDZ-RGS3; the RGS domain has GTPase activator protein (GAP) activity in vitro on mammalian G[alphai]3; F56B6.2 thus may stably bind EGL-30 at all stages of EGL-30's GTPase cycle, might organize EGL-30 into a stable multiprotein signalling complex (with GTP[gamma]S), and might persistently inhibit EGL-30 when triggered by calcium or phospholipids; F56B6.2 has no obvious function in mass RNAi assays
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 TransientList, Wang et al 2003  S3  genes                              
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

F56D5.2 F56D5.2 P W All gene names: F56D5.2; 4K162; CE05968; WBGene00010147; WP:CE05968
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, spermatogenesis                                
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, shared sperm, Romagnolo et al 2002  Fig3b                                 
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

F56E10.2 F56E10.2 P W All gene names: fhod-2; F56E10.2; 5A542; CE32443; WBGene00018976; WP:CE32443
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Romagnolo et al 2002  Fig3b Unkown,                                       
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

F56H6.1 F56H6.1 P W All gene names: F56H6.1; 1M863; CE25910; WBGene00010162; WP:CE25910
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F56H6.9 F56H6.9 P W All gene names: F56H6.9; 1M887; CE38377; WBGene00010170; WP:CE38377
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F58B3.4 F58B3.4 P W All gene names: F58B3.4; 4M394; CE36170; WBGene00010231; WP:CE36170
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, McCarroll et al 2004  SFig1-4                                  
                                              conserved w/ Drosoph, Reinke et al 2004, fem1 enriched                             
                                              genes, Reinke et al 2004, wt vs glp-4 enriched genes,                              
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt herm vs wt male enriched gen, Romagnolo et                             
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated                                                                  

F58E1.12 F58E1.12 P W All gene names: F58E1.12; 2B984; CE11394; WBGene00019043; WP:CE11394
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Romagnolo et al 2002  Fig3b Unkown                                  

F58E10.7 F58E10.7 P W All gene names: F58E10.7; 5O473; CE18789; WBGene00010262; WP:CE18789
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown,                                
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

F58E2.7 F58E2.7 P W All gene names: srz-88; F58E2.7; 4E220; NM_067950; WBGene00019050
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F59A3.2 F59A3.2 P W All gene names: F59A3.2; 1G83; CE11418; CE33116; WBGene00019075; WP:CE11418; WP:CE33116
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster F, Reinke et al 2004, fem1 enriched genes,                                 
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, oogenesis enriched genes, Reinke et al 2004,                              
                                              wt herm vs wt male enriched gen, Romagnolo et al 2002                              
                                              Fig3b Unkown                                                                       

F59A7.6 F59A7.6 P W All gene names: F59A7.6; WBGene00019093; WBGene00043387
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

F59F3.4 F59F3.4 P W All gene names: F59F3.4; CE31550; WBGene00010334; WP:CE31550; XL622
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

F59G1.2 F59G1.2 P W All gene names: tsp-18; F59G1.2; 2G195; CE25926; NM_062777; WBGene00006644; WP:CE25926 WormBase description: transpanin
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, fem3                                   
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown                                 

F59G1.4 F59G1.4 P W All gene names: F59G1.4; 2G193; CE07318; WBGene00019128; WP:CE07318
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S4 TransientList, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

F59H6.5 F59H6.5 P W All gene names: F59H6.5; F59H6.I; 2C297; CE20911; WBGene00019136; WP:CE20911
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

H09G03.1 H09G03.1 P W All gene names: H09G03.1; 3E319; CE34570; WBGene00019174; WP:CE34570
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

H23L24.4 H23L24.B P W All gene names: H23L24.4; 4J466; CE23819; WBGene00019231; WP:CE23819 WormBase description: 7tm_1
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

H24K24.5 H24K24.B P W All gene names: fmo-15; fmo-5; H24K24.5; 5B378; CE20989; NM_070951; WBGene00001480; WP:CE20989 WormBase description: fmo-15 encodes a flavin-containing monooxygenase (FMO) homologous to various human FMOs mutated in trimethylaminuria (OMIM:602079). WormBase CDS description: flavin-containing monooxygenase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

H25K10.6 H25K10.6 P W All gene names: H25K10.6; 4Q993; CE19938; WBGene00010415; WP:CE19938
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

H41C03.2 H41C03.2 P W All gene names: H41C03.2; 2G140; CE39382; WBGene00019269; WP:CE39382
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

K01A12.3 K01A12.1 P W All gene names: K01A12.3; CE37654; WBGene00019287; WP:CE37654; XJ236
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

K01A2.2 K01A2.2 P W All gene names: far-7; K01A2.2; K01A2.2a.1; K01A2.2a.2; 2A611; CE19511; CE33412; NM_061307; NM_182191; WBGene00001391; WP:CE19511; WP:CE33412
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Romagnolo et al 2002  Fig3b Unkown,                             
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K01C8.8 K01C8.8 P W All gene names: K01C8.8; 2I573; CE02269; WBGene00010460; WP:CE02269
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes, Romagnolo et al 2002  Fig3b                             
                                              Unkown                                                                             

K02B2.3 K02B2.3 P W All gene names: K02B2.3; K02B2.3.1; K02B2.3.2; K02B2.3.3; 4G702; CE27192; WBGene00019296; WP:CE27192
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

K02B2.6 K02B2.6 P W All gene names: K02B2.6; 4G726; CE04692; WBGene00019297; WP:CE04692
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Romagnolo et al                            
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated, ViswanathanM et al 2005  S2 daf-16                                      
                                              Resveratrol                                                                        

K02F3.10 K02F3.10 P W All gene names: K02F3.10; 3B468; CE01346; WBGene00019333; WP:CE01346
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

K02F3.8 K02F3.8 P W All gene names: K02F3.8; 3B454; CE01354; WBGene00019331; WP:CE01354
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K03B4.5 K03B4.5 P W All gene names: srx-77; K03B4.5; 5F142; CE36548; NM_071856; WBGene00005968; WP:CE36548 WormBase description: 7TM chemoreceptor, srx family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

K03B4.7 5K03B4.7 P W All gene names: K03B4.7; K03B4.7a.1; K03B4.7a.2; 5F170; CE28581; CE33133; WBGene00019357; WP:CE28581; WP:CE33133
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma, Reinke                             
                                              et al 2004, IVb male soma enriched genes, Romagnolo et                             
                                              al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                                 
                                              sir-2.1 regulated, Wang et al 2003  S3  genes pass                                 
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

K03D3.3 K03D3.3 P W All gene names: srz-21; K03D3.3; 4R84; NM_070542; WBGene00010529
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K04A8.8 K04A8.8 P W All gene names: spp-20; K04A8.8; 5H36; CE30812; NM_072264; WBGene00005005; WP:CE30812 WormBase description: 7TM chemoreceptor, spp family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

K04F1.12 K04F1.12 P W All gene names: K04F1.12; 5C131; CE19963; WBGene00019391; WP:CE19963
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K04G11.2 K04G11.2, K04G11.6 P W All gene names: sel-7; K04G11.2; CE35893; NM_077991; WBGene00004764; WP:CE35893; XO950 WormBase description: sel-7 encodes a novel protein with two predicted PEST sequences that is conserved in the related nematode C. briggsae and several parasitic nematodes, but has no known homologs in other organisms; sel-7 was identified in screens for suppressors of dominant lin-12 mutations that result in vulvaless and egg-laying defective animals; although loss of SEL-7 function via mutation or RNAi results in no obvious defects in a wild-type background, genetic studies suggests that SEL-7 acts downstream of LIN-12/Notch to positively regulate LIN-12 signaling, perhaps by regulating the activity or formation of the LAG-1, LIN-12(intra), SEL-8 nuclear complex; in vitro, SEL-7 self-associates and also interacts with TIR-1 (F13B10.1B), a protein that contains sterile alpha and Toll interleukin receptor motifs, and MDT-29 (K08E3.8), a glutamine-rich protein similar to mediator complex subunits, however the functional significance of these interactions is not yet known; a SEL-7::GFP translational fusion reveals expression in the nuclei of several cell types, including vulval precursor cells and those of the developing gonad.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K05D4.7 K05D4.7 P W All gene names: srh-280; K05D4.7; 5Q667; NM_074679; WBGene00005485
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K07C11.8 K07C11.8 P W All gene names: K07C11.8; K07C11.8.1; K07C11.8.2; 5I694; CE37780; WBGene00019480; WP:CE37780
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Romagnolo et al 2002  Fig3b Unkown                                  

K07D4.2 K07D4.2 P W All gene names: K07D4.2; 2E334; CE19526; WBGene00019483; WP:CE19526
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

K07G5.4 K07G5.4 P W All gene names: K07G5.4; 1H742; CE06132; WBGene00010643; WP:CE06132
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, Romagnolo et al 2002  Fig3b Unkown                            

K08D12.7 K08D12.G P W All gene names: K08D12.7; CE38619; WBGene00044293; WP:CE38619
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

K09C4.7 K09C4.7 P W All gene names: K09C4.7; CE04735; WBGene00019552; WP:CE04735; XD891
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K09C6.3 K09C6.3 P W All gene names: K09C6.3; 5B329; CE11992; WBGene00019557; WP:CE11992
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

K09E2.3 0K09E2.3 P W All gene names: K09E2.3; CE02816; WBGene00019572; WP:CE02816; XJ293
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown, Wang et                             
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

K09E3.1 K09E3.1 P W All gene names: K09E3.1; CE04739; WBGene00019573; WP:CE04739; XR739 WormBase description: S. lavendulae subtilisin inhibitor-like protein-4 (SIL-4)
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

K09G1.1 K09G1.1 P W All gene names: K09G1.1; 5K69; CE12040; CE27428; WBGene00010727; WP:CE12040; WP:CE27428
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

K09H9.5 K09H9.5 P W All gene names: K09H9.5; 1D708; CE33146; CE36703; WBGene00019597; WP:CE33146; WP:CE36703
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  T3 20 most abundant                             
                                              Dauer, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated, Wang et al 2003  S8                              
                                              SAGE genes in the dauer exit                                                       

K10D11.4 K10D11.4 P W All gene names: K10D11.4; 4N756; CE16241; WBGene00010748; WP:CE16241
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005 S2 Resveratrol regulate WT                                 

K11H12.3 K11H12.3 P W All gene names: K11H12.3; 4B424; CE29518; WBGene00019659; WP:CE29518
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

K12D9.2 K12D9.2 P W All gene names: srh-84; K12D9.2; 5D465; NR_000498; WBGene00005305
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K12H6.10 K12H6.10 P W All gene names: K12H6.10; CE20013; WBGene00043428; WBGene00044368; WP:CE20013
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

M01D7.1 M01D7.1 P W All gene names: M01D7.1; 1C330; CE12260; WBGene00019706; WP:CE12260 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

M04C7.3 M04C7.3 P W All gene names: M04C7.3; 1J120; CE12398; WBGene00010854; WP:CE12398
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

M05D6.5 M05D6.5 P W All gene names: M05D6.5; M05D6.5.1; M05D6.5.2; 2I770; CE03503; WBGene00010878; WP:CE03503
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, Shen et al                              
                                              2005  T1 hif-1 depend hypoxia, ViswanathanM et al 2005                             
                                              S2 sir-2.1 regulated                                                               

M116.4 M116.4 P W All gene names: fbxb-73; sdz-25; M116.4; 4J168; CE21081; WBGene00019791; WP:CE21081
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Romagnolo et al                            
                                              2002  Fig3b Unkown                                                                 

M70.3 M70.3 P W All gene names: M70.3; 4D2; CE17195; CE25959; WBGene00019785; WP:CE17195; WP:CE25959
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, spermatogenesis                                
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, shared sperm, Romagnolo et al 2002  Fig3b                                 
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

R01E6.7 R01E6.7 P W All gene names: R01E6.7; CE38968; WBGene00010971; WP:CE38968; XO182
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

R02F2.5 R02F2.5 P W All gene names: R02F2.5; 3G569; CE00684; WBGene00019834; WP:CE00684
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, fem3 enriched genes, Romagnolo et al 2002  Fig3b                             
                                              Unkown, Romagnolo et al 2002 Fig5 genes in let-60                                  
                                              timecour                                                                           

R03H10.7 R03H10.7 P W All gene names: R03H10.7; 2E466; CE02843; WBGene00019859; WP:CE02843
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Romagnolo et al 2002  Fig3b Unkown,                                        
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S7 SAGE genes in the dataset, Wang et al 2003                             
                                              S8 SAGE genes in the dauer exit                                                    

R04B5.7 R04B5.7 P W All gene names: R04B5.7; 5K570; CE06217; WBGene00011005; WP:CE06217 WormBase description: Weak similarity to PAB-dependent poly(A)-specific ribonuclease (Swiss Prot accession number P32521)
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

R04F11.3 R04F11.3 P W All gene names: R04F11.3; R04F11.3.1; R04F11.3.2; 5M796; CE29598; WBGene00011016; WP:CE29598
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, Romagnolo et al 2002                             
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

R102.5 R102.5 P W All gene names: R102.5; R102.5a.1; R102.5a.2; 4L460; CE35601; CE35602; WBGene00011292; WP:CE35601; WP:CE35602
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, wt herm vs wt male enriched                              
                                              gen, Reinke et al 2004, mixed oogenesis soma, Romagnolo                            
                                              et al 2002  Fig3b Unkown, ViswanathanM et al 2005  S2                              
                                              sir-2.1 regulated                                                                  

R10D12.13 R10D12.13 P W All gene names: R10D12.13; 5O445; CE12696; CE23920; CE23921; WBGene00011194; WP:CE12696; WP:CE23920; WP:CE23921
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Romagnolo et al                             
                                              2002  Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                            
                                              regulated                                                                          

R11.3 R11.3 P W All gene names: R11.3; CE12718; WBGene00011228; WP:CE12718; XQ808
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

R11D1.2 R11D1.2 P W All gene names: R11D1.2; 5N189; CE06307; WBGene00011243; WP:CE06307
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

R155.3 R155.3 P W All gene names: R155.3; 3D60; CE12866; WBGene00020117; WP:CE12866
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, spermatogenesis enriched genes, Reinke et al                              
                                              2004, fem3 enriched genes, Reinke et al 2004, wt vs                                
                                              glp-4 enriched genes, Reinke et al 2004, GO categories,                            
                                              Reinke et al 2004, list of genes in cluster D,                                     
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 daf-16 Resveratrol                                                        

R52.7 R52.7 P W All gene names: srh-195; R52.7; 2C402; CE21126; NM_061785; WBGene00005408; WP:CE21126 WormBase description: 7TM chemoreceptor, srh family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

R53.8 R53.8 P W All gene names: R53.8; 2K267; CE03578; WBGene00011277; WP:CE03578
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

T01B6.1 T01B6.1 P W All gene names: T01B6.1; CE37141; WBGene00020134; WP:CE37141; XC967
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T01C1.2 T01C1.2 P W All gene names: mbr-1; T01C1.2; CE39173; WBGene00011315; WP:CE39173; XL336
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T01E8.2 T01E8.2 P W All gene names: hlh-24; T01E8.2; 2K509; CE02306; NM_063803; WBGene00004334; WP:CE02306 WormBase description: ref-1 encodes a protein with two basic helix-loop-helix (bHLH) domains that is distantly related to the hairy/Enhancer of split subfamily of bHLH transcription factors; REF-1 is required in hermaphrodites during early larval development for regulating the pattern of posterior Pn.p hypodermal cell fusions, primarily through regulation of MAB-5 homeodomain protein activity; REF-1 is also required for head morphogenesis and specification of the V6 lateral seam cell fate. WormBase CDS description: Helix-loop-helix DNA-binding domain (2 domains)
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T02E1.4 T02E1.4 P W All gene names: T02E1.4; 1I792; CE13052; WBGene00011377; WP:CE13052 WormBase description: dehydrogenase
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 Dauer Enriched, Wang et al 2003  S4 genes pass                                  
                                              two-wayANOVA P0                                                                    

T02H7.1 T02H7.1 P W
                                              
Member of lists (Publications lists):
  Romagnolo et al 2002  Fig3b Unkown,                              
                                              Wang et al 2003  S4 Climbing, Wang et al 2003  S3                                  
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

T04B2.3 T04B2.3 P W All gene names: T04B2.3; 4K813; CE23944; WBGene00011422; WP:CE23944
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Zhang et                            
                                              al 2002, T1 mec-3 dependent genes                                                  

T05A6.5 T05A6.5 P W All gene names: T05A6.5; 2I115; CE34985; WBGene00011459; WP:CE34985
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T05B4.8 T05B4.8 P W All gene names: T05B4.8; 5E584; CE13207; WBGene00020239; WP:CE13207
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T05G11.4 0T05G11.4 P W All gene names: srw-27; T05G11.4; 5Q415; CE18933; NM_074591; WBGene00005774; WP:CE18933 WormBase description: 7TM chemoreceptor, srw family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T06E6.5 T06E6.5 P W All gene names: fbxa-135; T06E6.5; 5P883; CE39277; WBGene00011539; WP:CE39277 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Romagnolo et al 2002  Fig3b Unkown,                             
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T07H3.2 T07H3.2 P W All gene names: bath-46; T07H3.2; 2B891; CE19563; WBGene00020325; WP:CE19563
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T08D2.1 T08D2.1 P W All gene names: T08D2.1; CE21168; WBGene00011606; WP:CE21168; XA823 WormBase description: emp24/gp25L/p24 family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T09A5.5 T09A5.5 P W All gene names: T09A5.5; T09A5.5.1; T09A5.5.2; 2I142; CE01086; WBGene00011634; WP:CE01086
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T09B9.5 T09B9.5 P W All gene names: T09B9.5; CE01653; WBGene00011646; WP:CE01653; XK397
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T09F5.9 6T09F5.9 P W All gene names: clec-47; T09F5.9; 5P657; CE13537; WBGene00011668; WP:CE13537 WormBase description: C-type lectin
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T10D4.11 T10D4.11 P W All gene names: T10D4.11; 2D434; CE20051; WBGene00020410; WP:CE20051
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T12A2.6 T12A2.6 P W All gene names: T12A2.6; 3H332; CE30395; WBGene00020440; WP:CE30395
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T12D8.5 T12D8.5 P W All gene names: T12D8.5; T12D8.5.1; T12D8.5.2; 3O714; CE33832; WBGene00011733; WP:CE33832
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig4 Mount 15, Reinke                            
                                              et al 2004, wt herm vs wt male enriched gen, Reinke et                             
                                              al 2004, herm soma enriched genes, Romagnolo et al 2002                            
                                               Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                 
                                              regulated                                                                          

T13C5.3 T13C5.3 P W All gene names: T13C5.3; CE35768; WBGene00020484; WP:CE35768; XG797
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 LateList, Wang et al 2003  S4 genes pass                               
                                              two-wayANOVA P0                                                                    

T13F2.4 T13F2.4 P W All gene names: T13F2.4; 4K553; CE13625; WBGene00011744; WP:CE13625
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

T14C1.2 T14C1.2 P W All gene names: T14C1.2; CE06446; WBGene00011766; WP:CE06446; XP12 WormBase description: reverse transcriptase
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T14G10.4 T14G10.4 P W All gene names: T14G10.4; 4K921; CE06450; WBGene00011774; WP:CE06450 WormBase description: Transthyretin-like family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, mixed sperm soma,                              
                                              Reinke et al 2004, GO categories, Reinke et al 2004,                               
                                              fem3 enriched genes, Romagnolo et al 2002  Fig3b                                   
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

T16G1.8 6T16G1.8 P W All gene names: grl-2; T16G1.8; 5N425; CE20078; NM_073837; WBGene00001711; WP:CE20078
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Reinke et al 2004, list of genes in cluster                                 
                                              order, Reinke et al 2004, list of genes in cluster B,                              
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

T17A3.10 T17A3.10 P W All gene names: T17A3.10; 3A772; CE19587; WBGene00020546; WP:CE19587
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T20B12.1 T20B12.1 P W All gene names: T20B12.1; 3I479; CE01407; WBGene00020600; WP:CE01407
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, fem1 enriched genes, Reinke                            
                                              et al 2004, oogenesis enriched genes, Reinke et al                                 
                                              2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt                            
                                              herm vs wt male enriched gen, Romagnolo et al 2002                                 
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S5 genes common to feeding                             
                                              ANOVA, Wang et al 2003  S3  genes pass one-way ANOVA                               

T20C4.1 T20C4.1 P W All gene names: srj-9; T20C4.1; 5D901; CE21188; NM_071562; WBGene00005597; WP:CE21188 WormBase description: 7TM chemoreceptor, srj family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T20D3.3 T20D3.3 P W All gene names: T20D3.3; T20D3.3a.1; T20D3.3a.2; 4K98; CE28683; CE38418; WBGene00011857; WP:CE28683; WP:CE38418
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S5 genes                              
                                              common to feeding ANOVA, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA                                                                 

T21B10.3 T21B10.3 P W All gene names: T21B10.3; 2J227; CE23993; WBGene00011885; WP:CE23993
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Non dauer genes                                 
                                              P<0.05, Lund et al 2002  Fig1 aging-regulated genes,                               
                                              Reinke et al 2004, list of genes in cluster F, Reinke                              
                                              et al 2004, fem1 enriched genes, Reinke et al 2004,                                
                                              list of genes in cluster order, Reinke et al 2004, wt                              
                                              herm vs wt male enriched gen, Reinke et al 2004, mixed                             
                                              oogenesis soma, Romagnolo et al 2002  Fig3b Unkown                                 

T21B4.9 T21B4.9 P W All gene names: srh-70; T21B4.9; 2M808; CE16434; NM_064272; WBGene00005291; WP:CE16434 WormBase description: 7TM receptor
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T22B7.1 T22B7.1 P W All gene names: cog-2; egl-13; T22B7.1; T22B7.1a.1; T22B7.1a.2; T22B7.1b.1; T22B7.1b.2; T22B7.1b.3; T22B7.1b.4; T22B7.1c.1; T22B7.1c.2; T22B7.1c.3; CE05030; CE28487; CE33702; CE38552; NM_076554; WBGene00001182; WP:CE05030; WP:CE28487; WP:CE33702; WP:CE38552; XG291 WormBase description: egl-13 encodes a transcription factor of the HMG (high mobility group) box family that affects the cell fusion process that makes the vulval-uterine connection and thereby affects egg laying; expressed in the pi lineage cells, transiently expressed in the rho lineage, in the anchor cell following fusion, and in neurons, body wall muscles, and intestinal cells.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, herm soma enriched                               
                                              genes, Reinke et al 2004, list of genes in cluster B,                              
                                              Romagnolo et al 2002  Fig3b Unkown                                                 

T22B7.3 T22B7.2 P W All gene names: T22B7.3; CE31242; WBGene00020672; WP:CE31242; XG273
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order, Reinke et                              
                                              al 2004, IVb male soma enriched genes, Romagnolo et al                             
                                              2002  Fig3b Unkown                                                                 

T23B7.1 T23B7.1 P W All gene names: T23B7.1; 2F133; WBGene00020715
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, Romagnolo et al 2002  Fig3b Unkown,                                  
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T23F4.3 T23F4.3 P W All gene names: T23F4.3; 2B458; CE14088; WBGene00020741; WP:CE14088
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Romagnolo et al 2002  Fig3b Unkown, Wang et al                             
                                              2003  S7 SAGE genes in the dataset, Wang et al 2003  S5                            
                                              genes common to feeding ANOVA, Wang et al 2003  S3                                 
                                              genes pass one-way ANOVA, Wang et al 2003  S8 SAGE                                 
                                              genes in the dauer exit                                                            

T23G4.5 6T23G4.5 P W All gene names: T23G4.5; 4O443; CE16457; WBGene00011961; WP:CE16457
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Reinke et al 2004, IVb male soma enriched                            
                                              genes, Romagnolo et al 2002  Fig3b Unkown                                          

T24D1.1 T24D1.1 P W All gene names: ChSy-S; sqv-5; T24D1.1; 1K529; CE35027; CE39182; WBGene00005023; WP:CE35027; WP:CE39182 WormBase description: sqv-5 encodes a chondroitin synthase that both initiates and elongates chondroitin chains (unlike human chondroitin synthase, which only elongates them); SQV-5 is required for cytokinesis (e.g., at the one-cell embryo stage), gonad migration, and vulval morphogenesis (by expanding the extracellular space of the vulva in L4 larvae); the common requirement for SQV-5 in both processes may be to promote filling an extracellular space with fluid (either in the eggshell, or underneath the L4 cuticle); SQV-5 colocalizes with SQV-1 at punctate foci (probably the Golgi apparatus) in the cytoplasm of the vulva, the uterus and oocytes; SQV-5 is most similar to human chondroitin synthase (KIAA0990) and Drosophila CG9220.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, fem1 enriched genes,                              
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, oogenesis enriched genes, Reinke et                             
                                              al 2004, wt vs glp-4 enriched genes, Reinke et al 2004,                            
                                              wt herm vs wt male enriched gen, Romagnolo et al 2002                              
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated                                                                          

T24E12.1 T24E12.1 P W All gene names: T24E12.1; 2E75; CE17259; WBGene00020771; WP:CE17259
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T24E12.8 T24E12.8 P W All gene names: srx-112; T24E12.8; 2E54; CE36571; NM_062243; WBGene00006003; WP:CE36571 WormBase description: 7TM chemoreceptor, srx family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T25D3.4 5T25D3.4 P W All gene names: T25D3.4; 2A441; CE36022; WBGene00020798; WP:CE36022
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown                                                                             

T26E3.4 T26E3.4 P W All gene names: T26E3.4; 1N259; CE24015; WBGene00012037; WP:CE24015
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

T26E4.7 T26E4.7 P W All gene names: T26E4.7; 5Q273; CE16478; WBGene00012049; WP:CE16478
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T26H5.2 T26H5.2 P W All gene names: T26H5.2; NM_074439; WBGene00043523
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T28A11.16 T28A11.16 P W All gene names: T28A11.16; 5D734; CE14309; WBGene00020878; WP:CE14309
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Romagnolo et al 2002  Fig3b Unkown, Wang et al                              
                                              2003  S4 TransientList, Wang et al 2003  S3  genes pass                            
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

T28A11.18 T28A11.18 P W All gene names: T28A11.18; 5D742; CE39635; WBGene00020880; WP:CE39635
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

T28A11.7 3T28A11.7 P W All gene names: srbc-5; T28A11.7; 5D737; CE38111; NM_071495; WBGene00020874; WP:CE38111 WormBase description: 7TM chemoreceptor, srbc family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T28A8.2 2T28A8.2 P W All gene names: T28A8.2; 3O580; CE18973; WBGene00012108; WP:CE18973
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

T28B8.1 T28B8.1 P W All gene names: T28B8.1; T28B8.1.1; T28B8.1.2; 1I711; CE14329; WBGene00012113; WP:CE14329
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

T28D9.4 T28D9.4 P W All gene names: T28D9.4; 2G769; CE36024; CE39787; WBGene00020896; WP:CE36024; WP:CE39787
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

W01A11.7 W01A11.7 P W All gene names: F46E10.G; W01A11.7; W01A11.7.1; W01A11.7.2; 5G982; CE37796; WBGene00020912; WP:CE37796
                                              
Member of lists (Publications lists):
                                              Jones et al 2001  Dauer specific genes                            
                                              P<0.05, Jones et al 2001  T3 20 most abundant Dauer,                               
                                              Reinke et al 2004, IVb male soma enriched genes,                                   
                                              Romagnolo et al 2002  Fig3b Unkown, Wang et al 2003  S3                            
                                               genes pass one-way ANOVA, Wang et al 2003  S8 SAGE                                
                                              genes in the dauer exit, Wang et al 2003  S7 SAGE genes                            
                                              in the dataset, Wang et al 2003  S4 genes pass                                     
                                              two-wayANOVA P0, Wang et al 2003  S4 Dauer Enriched                                

W01C8.1 W01C8.1 P W All gene names: W01C8.1; CE05029; WBGene00020918; WP:CE05029; XG313
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

W02H3.1 W02H3.1 P W All gene names: W02H3.1; CE03773; WBGene00012217; WP:CE03773; XL718
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm soma enriched                             
                                              genes, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

W03B1.2 W03B1.2 P W All gene names: W03B1.2; 4F95; CE34601; WBGene00020972; WP:CE34601
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

W03F11.1 W03F11.1 P W All gene names: W03F11.1; 1C788; CE14542; WBGene00021005; WP:CE14542
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Reinke et al 2004, herm soma enriched genes,                                
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

W03F11.4 W03F11.4 P W All gene names: W03F11.4; 1C804; CE28098; WBGene00021007; WP:CE28098 WormBase description: protein-tyrosine phosphatase
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, list of genes in cluster D, Reinke et al 2004,                               
                                              fem3 enriched genes, Romagnolo et al 2002  Fig3b                                   
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

W03G1.3 W03G1.3 P W All gene names: W03G1.3; CE17281; WBGene00043537; WP:CE17281
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

W06A11.1 W06A11.1 P W All gene names: W06A11.1; CE36330; WBGene00021052; WP:CE36330
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

W06D12.6 5W06D12.6 P W All gene names: W06D12.6; 5S185; CE36615; WBGene00012305; WP:CE36615
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

W06G6.9 W06G6.9 P W All gene names: W06G6.9; 5R126; CE36411; WBGene00012311; WP:CE36411
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

W07G1.2 W07G1.2 P W All gene names: sre-44; W07G1.2; W07G1.B; 2O239; CE24036; NM_064517; WBGene00012329; WP:CE24036 WormBase description: 7TM receptor, sre family
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, intrinsic, Reinke                              
                                              et al 2004, wt vs glp-4 enriched genes, Romagnolo et al                            
                                              2002  Fig3b Unkown                                                                 

W09C3.3 W09C3.3 P W All gene names: W09C3.3; 1F275; CE36728; WBGene00021111; WP:CE36728
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown                                   

Y102A5B.1 F49A5.1 P W All gene names: clec-27; Y102A5B.1; 5R335; CE35640; WBGene00013607; WP:CE35640 WormBase description: Lectin C-type domain short and long forms (2 domains)
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002  Fig3b Adhesion, ViswanathanM et                              
                                              al 2005  S2 sir-2.1 regulated                                                      

Y102A5C.21 Y102A5C.21 P W All gene names: srh-119; Y102A5C.21; 5R453; CE33200; NM_074891; WBGene00005338; WP:CE33200 WormBase description: G-protein coupled receptor, srh family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y104H12A.1 Y104H12A.1 P W All gene names: nhr-41; Y104H12A.1; 4C159; CE37054; NM_067672; WBGene00022423; WP:CE37054 WormBase description: nhr-41 encodes a nuclear receptor of the NR2D1 subfamily that is orthologous to the Drosophila DHR78 nuclear receptor essential for the onset of metamorphosis, and the mammalian TR2 and TR4 receptors which are expressed in androgen-sensitive organs and brain tissue, respectively; by homology, NHR-41 likely functions as a transcription factor that, based upon RNAi experiments, plays a role in the formation of SDS-resistant dauer larvae; using two different reporter fusions, nhr-41 expression is detected in seam cells, excretory cells, and rectal epithelia, or in chemosensory neurons, gut, and head and tail hypodermis; nhr-41 mRNAs are expressed at all larval stages at precise intervals relative to molting: mRNA produced by upstream promoter sequence is detected at the time larval molts occur, while mRNA produced by promoter sequence in the fourth intron is detected at variable levels during larval development with distinct peaks of expression seen at the beginning of the intermolt.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y105E8C.I Y105E8C.I P W
                                              
Member of lists (Publications lists):
  Romagnolo et al 2002  Fig3b Unkown,                              
                                              Wang et al 2003  S3  genes pass one-way ANOVA, Wang et                             
                                              al 2003  S4 Dauer Enriched, Wang et al 2003  S4 genes                              
                                              pass two-wayANOVA P0                                                               

Y116A8B.1 Y116A8B.1 P W All gene names: Y116A8B.1; 4S161; CE16679; WBGene00013779; WP:CE16679
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y116A8C.18 Y116A8C.18 P W All gene names: nhr-229; Y116A8C.18; 4R972; CE23327; WBGene00013795; WP:CE23327
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y119D3B.9 Y119D3_460.A P W All gene names: fbxa-21; Y119D3B.9; 3C325; CE27466; WBGene00022487; WP:CE27466
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y15E3A.1 Y15E3B.B P W All gene names: nhr-91; Y15E3A.1; Y15E3A.1a.1; Y15E3A.1a.2; Y15E3A.1a.3; Y15E3A.1b.1; Y15E3A.1b.2; Y15E3A.1b.3; CE27779; CE38001; NM_078135; WBGene00003681; WP:CE27779; WP:CE38001; XP933 WormBase description: nhr-91 encodes a conserved nuclear receptor that is orthologous to members of the NR6 subfamily of nuclear receptors that includes Drosophila HR4 and human germ cell nuclear factor (GCNF, OMIM:600281, human and mouse GCNF are expressed primarily in the testis); by homology, NHR-91 is predicted to function as a transcription factor that may activate or repress transcription in response to a hormonal signal; however, as loss of nhr-91 activity via RNAi does not result in any obvious abnormalities, the precise role of NHR-91 in C. elegans development and/or behavior is not yet known; nhr-91 is expressed in anterior neurons, seam cells, excretory cells, the spermatheca, and the developing vulva. WormBase CDS description: nuclear hormone receptor nhr-91
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Romagnolo et al 2002  Fig3b Unkown,                              
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

Y17G9A.2 Y17G9A.G P W All gene names: Y17G9A.2; Y17G9A.G; 4F620; CE27467; WBGene00021195; WP:CE27467
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y17G9B.F Y17G9B.F P W
                                              
Member of lists (Publications lists):
  Romagnolo et al 2002  Fig3b Unkown                             

Y18D10A.23 Y18D10A.23 P W All gene names: Y18D10A.23; 1N460; CE21420; WBGene00012487; WP:CE21420
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y18H1A.2 Y18H1A_68.D P W All gene names: Y18H1A.2; 1B168; CE21438; WBGene00021208; WP:CE21438
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y18H1A.6 Y18H1A_67.D, Y18H1A_67.F P W All gene names: pif-1; Y18H1A.6; 1B203; CE30311; NM_058373; WBGene00004028; WP:CE30311; cePIF1
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs                             
                                              glp-4 enriched genes, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 daf-16 Resveratrol,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y25C1A.10 Y25C1A.10 P W All gene names: srg-22; Y25C1A.10; Y25C1A.D; 2D380; CE33209; NM_062042; WBGene00005179; WP:CE33209 WormBase description: 7TM chemoreceptor, srg family
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y26E6A.2 Y26E6A.2 P W All gene names: Y26E6A.2; CE16608; WBGene00012513; WP:CE16608; XO524 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S4 TransientList, Wang et al 2003  S3                             
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

Y26G10.2 Y26G10.2 P W All gene names: srh-32; Y26G10.2; 5S183; CE19057; NM_075076; WBGene00005255; WP:CE19057
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol,                                    
                                              ViswanathanM et al 2005 S2 Resveratrol regulate WT                                 

Y34D9A.7 Y34D9A_150.C P W All gene names: Y34D9A.7; 1B519; CE34397; WBGene00021332; WP:CE34397
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y37E11B.2 Y37E11B.2 P W All gene names: Y37E11B.2; 4E343; CE36337; WBGene00021375; WP:CE36337
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y37H9A.1 Y37H9A.1 P W All gene names: Y37H9A.1; 1O369; CE20227; CE37562; WBGene00012576; WP:CE20227; WP:CE37562
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown                                   

Y38C1AB.E Y38C1AB.E P W
                                              
Member of lists (Publications lists):
  Romagnolo et al 2002  Fig3b Unkown                             

Y38E10A.17 Y38E10A.Q P W All gene names: Y38E10A.17; 2M924; CE21597; WBGene00012595; WP:CE21597
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Reinke et al 2004, male germline, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Romagnolo et al                               
                                              2002  Fig3b Unkown, Wang et al 2003  S3  genes pass                                
                                              one-way ANOVA, Wang et al 2003  S4 Early genes, Wang et                            
                                              al 2003  S4 genes pass two-wayANOVA P0                                             

Y38F1A.4 Y38F1A.4 P W All gene names: Y38F1A.4; 2N254; CE21609; WBGene00012607; WP:CE21609
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown, Wang et                             
                                              al 2003  S4 Climbing, Wang et al 2003  S3  genes pass                              
                                              one-way ANOVA, Wang et al 2003  S4 genes pass                                      
                                              two-wayANOVA P0                                                                    

Y38H6C.4 Y38H6C.4 P W All gene names: Y38H6C.4; 5U976; CE19098; WBGene00012617; WP:CE19098
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y39A1A.20 Y39A1A.20 P W All gene names: Y39A1A.20; 3L788; CE34114; WBGene00012657; WP:CE34114
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y39B6A.9 Y39B6B.X P W All gene names: Y39B6A.9; Y39B6B.X; 5T613; CE21699; WBGene00012671; WP:CE21699
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown                                   

Y39D8B.1 Y39D8B.C P W All gene names: Y39D8B.1; 5A849; CE37681; WBGene00021449; WP:CE37681
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S4 Early genes, Wang et al 2003  S3                               
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0                                                               

Y39E4B.9 Y39E4B.9 P W All gene names: bre-2; Y39E4B.9; 3O222; CE36339; NM_067314; WBGene00000267; WP:CE36339 WormBase description: bre-2 is required for Cry5B toxicity.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y39G10AR.14 Y39G10A_246.G P W All gene names: mcm-4; Y39G10AR.14; Y39G10AR.14.1; Y39G10AR.14.2; 1C888; CE21767; NM_058561; WBGene00003156; WP:CE21767 WormBase description: mcm-4 encodes a member of the MCM2/3/5 family with similarity to human MCM4 minichromosome maintenance deficient 4 protein, and affects embryonic viability, nuclear morphology in early embryos, and larval viability.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Reinke et al 2004, list of genes in cluster F,                            
                                              Reinke et al 2004, fem1 enriched genes, Reinke et al                               
                                              2004, list of genes in cluster order, Reinke et al                                 
                                              2004, oogenesis enriched genes, Reinke et al 2004, wt                              
                                              vs glp-4 enriched genes, Reinke et al 2004, wt herm vs                             
                                              wt male enriched gen, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

Y39G10AR.5 Y74C10A_148.A P W All gene names: Y39G10AR.5; 1C917; CE36737; WBGene00021463; WP:CE36737
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, IVb male soma                                  
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown                                 

Y41E3.3 Y41E3.3 P W All gene names: Y41E3.3; 4P759; CE32967; WBGene00012763; WP:CE32967
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y46B2A.B Y46B2A.B P W
                                              
Member of lists (Publications lists):
  Romagnolo et al 2002  Fig3b Unkown                             

Y46G5A.22 Y46G5.Y P W All gene names: Y46G5A.22; 2N108; CE21999; CE24295; WBGene00012912; WP:CE21999; WP:CE24295
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, male sperm, Reinke                             
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, mixed sperm soma, Reinke et al 2004, wt herm                              
                                              vs wt herm enriched gen, Reinke et al 2004, fem3                                   
                                              enriched genes, Romagnolo et al 2002  Fig3b Unkown,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y46H3C.6 Y46H3C_14.A P W All gene names: Y46H3C.6; 5C176; CE35806; WBGene00021606; WP:CE35806
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y47D3A.6 Y47D3A.I P W All gene names: her-2; tra-1; Y47D3A.6; Y47D3A.I; 3M262; CE28129; CE28130; WBGene00006604; WP:CE28129; WP:CE28130 WormBase description: tra-1 encodes two Zn-finger containing proteins that are members of the GLI family of transcription factors; during development, tra-1 functions cell autonomously as the terminal regulator of the sex determination pathway that positively regulates all aspects of hermaphrodite somatic sexual differentiation; in addition, tra-1 activity is also required for proper development of the male somatic gonad; in regulating sex-specific development, TRA-1 functions, in part, as a transcriptional repressor of the MAB-3 DM protein and the EGL-1 BH3-domain cell death activator in the intestine and HSN neurons, respectively; TRA-1 is expressed in hermaphrodites and males in both the nucleus and cytoplasm of many different cell types; TRA-1 activity is regulated, in part, by post-translational mechanisms including inhibitory protein-protein interactions as well as regulated nuclear export mediated by the tra-2 mRNA.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated,                             
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y47G6A.14 Y47G6A_242.B P W All gene names: Y47G6A.14; 1E30; CE34401; WBGene00021640; WP:CE34401 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Romagnolo et al 2002  Fig3b Unkown                                  

Y47G6A.17 Y47G6A_247.B P W All gene names: Y47G6A.17; CE36745; WBGene00021643; WP:CE36745
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y49E10.1 Y49E10.1 P W All gene names: rpt-6; Y49E10.1; Y49E10.B; Y49E10.C; 3N461; CE22219; NM_067208; WBGene00004506; WP:CE22219 WormBase description: rpt-6 encodes a triple A ATPase that is a subunit of the 26S proteasome 19S regulatory particle (RP) base subcomplex; RPT-6 is required for embryonic and larval development and by homology, is predicted to function in unfolding protein substrates and translocating them into the core proteolytic particle (CP) of the proteasome. WormBase CDS description: ATPases associated with various cellular activities (AAA)
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class2 shorten                                    
                                              lifespan, Romagnolo et al 2002  Fig3b Unkown,                                      
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y4C6A.3 Y4C6A.G P W All gene names: Y4C6A.3; 4G216; CE21299; WBGene00021153; WP:CE21299 WormBase description: zinc finger protein
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster E, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y4C6A.I Y4C6A.I P W
                                              
Member of lists (Publications lists):
  Reinke et al 2004, intrinsic, Reinke                               
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, IVb male soma enriched genes, Romagnolo et al                                
                                              2002  Fig3b Unkown                                                                 

Y51H7B_6.A Y51H7B_6.A P W
                                              
Member of lists (Publications lists):
  Romagnolo et al 2002  Fig3b Unkown                             

Y54E10A.3 Y54E10A_155.B P W All gene names: Y54E10A.3; 1D801; CE24447; WBGene00021826; WP:CE24447; txl WormBase description: thioredoxin-like protein
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, intrinsic,                                
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, GO categories, Romagnolo et al 2002  Fig3b                             
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated,                             
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

Y55B1BM.1 Y55B1B_113.A P W All gene names: Y55B1BM.1; Y55B1BM.1a.1; Y55B1BM.1a.2; Y55B1BM.B; 3B26; CE29124; CE30055; CE34130; WBGene00021910; WP:CE29124; WP:CE30055; WP:CE34130
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y55F3BR.4 Y55F3A_747.G P W All gene names: Y55F3BR.4; 4B601; CE30056; WBGene00021941; WP:CE30056
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Shen et al 2005  T1 hif-1 depend hypoxia                                           

Y55F3BR.8 Y55F3A_747.E P W All gene names: Y55F3BR.8; 4B602; CE31657; CE37730; WBGene00021945; WP:CE31657; WP:CE37730
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster F, Reinke et al 2004, list of genes in                                  
                                              cluster order, Romagnolo et al 2002  Fig3b Unkown,                                 
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y55F3C.3 Y55F3C.F P W All gene names: Y55F3C.3; 4B505; CE29886; WBGene00021948; WP:CE29886
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt herm vs wt herm                             
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown,                                  
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y62H9A.12 1Y62H9A.12 P W All gene names: Y62H9A.12; CE19248; WBGene00013400; WP:CE19248; XM533
                                              
Member of lists (Publications lists):
                                              Lund et al 2002  Fig1 aging-regulated                             
                                              genes, Romagnolo et al 2002  Fig3b Unkown                                          

Y62H9A.14 Y62H9A.14 P W All gene names: Y62H9A.14; CE35695; WBGene00013402; WP:CE35695; XM539
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour                                 

Y62H9A.8 Y62H9A.8 P W All gene names: Y62H9A.8; CE19244; WBGene00013396; WP:CE19244; XM510
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y63D3A.3 Y63D3A.3 P W All gene names: fbxb-101; Y63D3A.3; 1O681; CE25528; WBGene00013404; WP:CE25528
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

Y71D11A.3 F58B6.4 P W All gene names: Y71D11A.3; 3C231; ACMSD; CE25548; CE32030; WBGene00022104; WP:CE25548; WP:CE32030
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S4 Early genes, Wang et al 2003  S3  genes                                
                                              pass one-way ANOVA, Wang et al 2003  S4 genes pass                                 
                                              two-wayANOVA P0                                                                    

Y71G12B.11 Y71G12A_195.E P W All gene names: Y71G12B.11; 1C213; CE27024; CE29914; WBGene00022151; WP:CE27024; WP:CE29914
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

Y73F8A.36 Y73F8A.D P W All gene names: Y73F8A.36; CE38468; WBGene00044259; WP:CE38468
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y76B12C.1 Y76B12C_69.A P W All gene names: Y76B12C.1; 4C805; CE25605; WBGene00022295; WP:CE25605
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y77E11A.9 Y77E11A_3443.N P W All gene names: Y77E11A.9; 4C188; CE34432; WBGene00022312; WP:CE34432
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y79H2A.11 Y75B8A.36 P W All gene names: apo-1; zyg-8; Y79H2A.11; Y79H2A.G; 3N161; CE31133; NM_067170; WBGene00006993; WP:CE31133 WormBase description: The zyg-8 gene encodes a protein with a doublecortin-like domain and a protein kinase domain; mutations of zyg-8 impair mitosis at the one-cell embryonic stage, which is normally asymmetrical, but which fails to show proper asymmetry in zyg-8 mutant embryos.
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown                                                                             

Y7A9C.8 Y7A9C.3 P W All gene names: srz-76; Y7A9C.8; 4R48; CE37456; WBGene00023518; WP:CE37456
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y80D3A.5 Y80D3B.C P W All gene names: cyp-42A1; Y80D3A.5; Y80D3B.C; 5T391; CE36516; NM_075287; WBGene00013585; WP:CE36516 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

Y80D3A.8 Y80D3B.F P W All gene names: Y80D3A.8; 5T419; CE24677; WBGene00013586; WP:CE24677
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, herm sperm, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, spermatogenesis enriched genes, Reinke et al                                 
                                              2004, GO categories, Reinke et al 2004, fem3 enriched                              
                                              genes, Romagnolo et al 2002  Fig3b Unkown, ViswanathanM                            
                                              et al 2005  S2 sir-2.1 regulated                                                   

Y82E9BR.13 Y119D3_456.A P W All gene names: Y82E9BR.13; 3C480; CE38010; WBGene00022346; WP:CE38010
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

Y94A7B.6 Y94A7B.6 P W All gene names: srh-300; Y94A7B.6; 5S303; CE26311; NM_075098; WBGene00005504; WP:CE26311
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

ZC21.2 ZC21.1 P W All gene names: trp-1; ZC21.2; 3J631; CE33009; CE39997; NM_066480; WBGene00006614; WP:CE33009; WP:CE39997; strpc1 WormBase description: trp-1 encodes a predicted transmembrane protein with similarity to transient receptor potential (TRP) ion channels; a TRP-1::GFP reporter fusion is expressed in motor neurons, interneurons, vulval and intestinal muscles, and the BAG sensory neuron; as loss of trp-1 activity via deletion mutation or large-scale RNAi results in no obvious defects, the precise role of trp-1 in C. elegans development and/or behavior is not yet known.
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

ZC328.1 ZC328.1 P W All gene names: ZC328.1; ZC328.1.1; ZC328.1.2; 1G981; CE27347; WBGene00022591; WP:CE27347
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

ZC334.1 ZC334.1 P W All gene names: ins-26; ZC334.1; 1O628; CE19307; NM_061044; WBGene00002109; WP:CE19307
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

ZC395.5 ZC395.5 P W All gene names: ZC395.5; 3G357; CE01441; WBGene00022597; WP:CE01441
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, Reinke et al 2004, list of genes in                             
                                              cluster A, Reinke et al 2004, list of genes in cluster                             
                                              order, Romagnolo et al 2002  Fig3b Unkown, Romagnolo et                            
                                              al 2002 Fig5 genes in let-60 timecour, ViswanathanM et                             
                                              al 2005  S2 sir-2.1 regulated, Wang et al 2003  S3                                 
                                              genes pass one-way ANOVA, Wang et al 2003  S4 genes                                
                                              pass two-wayANOVA P0, Wang et al 2003  S4 Dauer                                    
                                              Enriched                                                                           

ZC434.4 ZC434.4 P W All gene names: ZC434.4; 1K908; CE38014; WBGene00013892; WP:CE38014
                                              
Member of lists (Publications lists):
                                              Lund et al 2002   Fig3C                                           
                                              Germline-intrinsic, Romagnolo et al 2002  Fig3b Unkown,                            
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

ZC513.3 ZC513.3 P W All gene names: ZC513.3; 5I529; CE07610; WBGene00022628; WP:CE07610
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, wt vs glp-4                                    
                                              enriched genes, Reinke et al 2004, wt males vs glp4                                
                                              male enriched , Reinke et al 2004, spermatogenesis                                 
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, shared sperm, Romagnolo et al 2002                              
                                              Fig3b Unkown                                                                       

ZK1025.4 ZK1025.4 P W All gene names: ZK1025.4; 1M48; CE37173; WBGene00014184; WP:CE37173
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

ZK1025.8 ZK1025.8 P W All gene names: ZK1025.8; 1M63; WBGene00014188
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster C, Romagnolo et al 2002  Fig3b Unkown,                                     
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated, Wang et                             
                                              al 2003  S3  genes pass one-way ANOVA, Wang et al 2003                             
                                              S4 LateList, Wang et al 2003  S4 genes pass                                        
                                              two-wayANOVA P0                                                                    

ZK1098.7 ZK1098.7 P W All gene names: ZK1098.7; ZK1098.7.1; ZK1098.7.2; 3K612; CE00566; WBGene00014224; WP:CE00566
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

ZK1307.1 ZK1307.1 P W All gene names: ZK1307.1; ZK1307.1b.1; ZK1307.1b.2; 2J946; CE01690; CE35921; WBGene00014244; WP:CE01690; WP:CE35921
                                              
Member of lists (Publications lists):
                                              Baugh et al 2005, validated PAL-1                                 
                                              target genes, Baugh et al 2005, PAL-1 target genes,                                
                                              Reinke et al 2004, list of genes in cluster order,                                 
                                              Reinke et al 2004, list of genes in cluster C,                                     
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated, Wang et al 2003  S3  genes                             
                                              pass one-way ANOVA, Wang et al 2003  S4 Climbing, Wang                             
                                              et al 2003  S4 genes pass two-wayANOVA P0                                          

ZK218.1 ZK218.1 P W All gene names: ZK218.1; 5R573; CE16701; WBGene00013935; WP:CE16701
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

ZK228.7 ZK228.7 P W All gene names: srh-179; ZK228.7; 5S955; CE16716; NM_075217; WBGene00005394; WP:CE16716
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

ZK250.10 ZK250.10 P W All gene names: ZK250.10; 2C256; WBGene00022693
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

ZK262.11 ZK262.11 P W All gene names: srh-209; ZK262.11; 5S876; CE36074; NM_075199; WBGene00005419; WP:CE36074
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

ZK287.3 ZK287.3 P W All gene names: ZK287.3; 5K155; CE06612; WBGene00013964; WP:CE06612
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

ZK353.7 ZK353.7 P W All gene names: ZK353.7; 3J492; CE00391; WBGene00022702; WP:CE00391
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Reinke et al 2004, list of genes                             
                                              in cluster order, Reinke et al 2004, intrinsic, Reinke                             
                                              et al 2004, wt vs glp-4 enriched genes, Reinke et al                               
                                              2004, wt herm vs wt male enriched gen, Reinke et al                                
                                              2004, list of genes in cluster E, Romagnolo et al 2002                             
                                              Fig3b Unkown, ViswanathanM et al 2005  S2 sir-2.1                                  
                                              regulated, Wang et al 2003  S3  genes pass one-way                                 
                                              ANOVA, Wang et al 2003  S4 Early genes, Wang et al 2003                            
                                               S4 genes pass two-wayANOVA P0                                                     

ZK355.1 ZK355.H P W All gene names: ZK355.1; 2D223; CE24722; WBGene00022711; WP:CE24722
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

ZK355.4 ZK355.D P W All gene names: ZK355.4; 2D218; CE23457; WBGene00022714; WP:CE23457
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

ZK402.5 ZK402.5 P W All gene names: ZK402.5; CE05077; WBGene00022731; WP:CE05077; XC16
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

ZK666.4 ZK666.4 P W All gene names: ZK666.4; 2K767; CE02389; WBGene00014044; WP:CE02389
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, fem1 enriched                                  
                                              genes, Reinke et al 2004, mixed oogenesis soma,                                    
                                              Romagnolo et al 2002  Fig3b Unkown, ViswanathanM et al                             
                                              2005  S2 sir-2.1 regulated                                                         

ZK669.3 ZK669.3 P W All gene names: ZK669.3; 2I235; CE01114; WBGene00014053; WP:CE01114
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, wt herm vs wt herm                               
                                              enriched gen, Romagnolo et al 2002  Fig3b Unkown,                                  
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour                                 

ZK673.6 ZK673.6 P W All gene names: ZK673.6; 2K754; CE01718; WBGene00014062; WP:CE01718
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, spermatogenesis                                  
                                              enriched genes, Reinke et al 2004, fem3 enriched genes,                            
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, list of genes in cluster D, Reinke et al 2004,                            
                                              shared sperm, Romagnolo et al 2002  Fig3b Unkown,                                  
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated                                      

ZK697.14 ZK697.9 P W All gene names: ZK697.14; 5C224; CE19645; WBGene00022809; WP:CE19645
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown                                

ZK809.3 ZK809.3 P W All gene names: ZK809.3; ZK809.3.1; ZK809.3.2; 4M417; CE03831; WBGene00014086; WP:CE03831
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig1-4                                     
                                              conserved w/ Drosoph, Romagnolo et al 2002  Fig3b                                  
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

ZK930.7 ZK930.7 P W All gene names: ZK930.7; 2M205; CE16752; WBGene00014157; WP:CE16752
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, spermatogenesis                                
                                              enriched genes, Reinke et al 2004, wt herm vs wt herm                              
                                              enriched gen, Reinke et al 2004, fem3 enriched genes,                              
                                              Reinke et al 2004, wt vs glp-4 enriched genes, Reinke                              
                                              et al 2004, wt males vs glp4 male enriched , Reinke et                             
                                              al 2004, shared sperm, Romagnolo et al 2002  Fig3b                                 
                                              Unkown, ViswanathanM et al 2005  S2 sir-2.1 regulated                              

ZK971.1 ZK971.1 P W All gene names: ZK971.1; 2K568; CE02408; WBGene00014175; WP:CE02408
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown,                               
                                              Romagnolo et al 2002 Fig5 genes in let-60 timecour,                                
                                              Wang et al 2003  S5 genes common to feeding ANOVA, Wang                            
                                              et al 2003  S3  genes pass one-way ANOVA                                           

ZK973.6 7T03A1.3 P W All gene names: anc-1; ZK973.6; 1E925; CE33588; NM_058952; WBGene00000140; WP:CE33588 WormBase description: anc-1 encodes a 8546-residue protein, orthologous of Drosophila Msp-300 and mammalian Syne proteins, which may extend more than 0.5 micrometers in vivo; ANC-1 has coiled regions, a nuclear envelope localization domain (the KASH domain) and an actin-binding domain; ANC-1 affects the positioning of nuclei and mitochondria within the cytoskeleton; ANC-1 is expressed in the cytoplasm, but localized to the nuclear periphery in an UNC-84-dependent manner.
                                              
Member of lists (Publications lists):
                                              Reinke et al 2004, list of genes in                               
                                              cluster order, Reinke et al 2004, list of genes in                                 
                                              cluster B, Romagnolo et al 2002  Fig3b Unkown                                      

ZK994.6 ZK994.6 P W All gene names: ZK994.6; 5I980; CE15493; WBGene00022842; WP:CE15493
                                              
Member of lists (Publications lists):
                                              Romagnolo et al 2002  Fig3b Unkown