ReichertK et al 2005 T1 xenobiotic induced P450, 10 genes

Gene list file name:ReichertK2005.T1_xenobiotic_induced_P450-b5.txt
Type of gene identifier:MA primer pair (sjj)
Description:ReichertK et al 2005 Table1: xenobiotic induced P450-b5  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

C03G6.14 C03G6.14 P W All gene names: cyp-35A1; C03G6.14; 5H838; CE36781; NM_072478; WBGene00015399; WP:CE36781
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, ReichertK et al 2005 T1 xenobiotic                               
                                              induced P450, Reinke et al 2004, herm soma enriched                                
                                              genes                                                                              

C03G6.15 C03G6.15 P W All gene names: cyp-35A2; C03G6.15; 5H840; CE35217; NM_072479; WBGene00015400; WP:CE35217 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ReichertK et al 2005 T1 xenobiotic induced                               
                                              P450, Reinke et al 2004, herm soma enriched genes, Wang                            
                                              et al 2003  S6 removed genes of contamination                                      

C06B3.3 C06B3.3 P W All gene names: cyp-35C1; C06B3.3; 5O378; CE27662; NM_171550; WBGene00007362; WP:CE27662 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class2 shorten                            
                                              lifespan, ReichertK et al 2005 T1 xenobiotic induced                               
                                              P450                                                                               

F08F3.7 F08F3.7 P W All gene names: ccp-14A5; cyp-14A5; F08F3.7; 5F900; CE09262; NM_072034; WBGene00000373; WP:CE09262 WormBase description: ccp-14A5 encodes a member of the cytochrome P450 family. WormBase CDS description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Kwon et al 2004 T1 late-induction                                 
                                              Ethanol-response, Menzel et al 2001  T3 CYP genes,                                 
                                              ReichertK et al 2005 T1 xenobiotic induced P450, Reinke                            
                                              et al 2004, fem3 enriched genes, Reinke et al 2004,                                
                                              mixed sperm soma, Reinke et al 2004, GO categories,                                
                                              Romagnolo et al 2002  Fig3b Oxidation, ViswanathanM et                             
                                              al 2005  S2 daf-16 Resveratrol, Wang et al 2003  S4                                
                                              TransientList, Wang et al 2003  S3  genes pass one-way                             
                                              ANOVA, Wang et al 2003  S4 genes pass two-wayANOVA P0                              

F28G4.1 F28G4.1 P W All gene names: cyp-37B1; F28G4.1; 5Q759; CE15919; NM_074708; WBGene00009226; WP:CE15919 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 Cytochrome                                
                                              P450, ReichertK et al 2005 T1 xenobiotic induced P450,                             
                                              Reinke et al 2004, list of genes in cluster A, Reinke                              
                                              et al 2004, list of genes in cluster order,                                        
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol, Wang et                            
                                              al 2003  S6 removed genes of contamination                                         

K07C6.3 K07C6.3 P W All gene names: cyp-35B2; K07C6.3; 5E421; CE17174; NM_071693; WBGene00019471; WP:CE17174 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Custodia et al 2001  T2 Cytochrome                                
                                              P450, Murphy et al 2003  Fig2 Class1 elongate lifespan,                            
                                              ReichertK et al 2005 T1 xenobiotic induced P450,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol                                     

K07C6.4 K07C6.4 P W All gene names: ccp-35B1; cyp-35B1; dod-13; K07C6.4; 5E419; CE17175; NM_071692; WBGene00019472; WP:CE17175 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Murphy et al 2003  Fig2 Class1                                    
                                              elongate lifespan, ReichertK et al 2005 T1 xenobiotic                              
                                              induced P450, Wang et al 2003  S6 removed genes of                                 
                                              contamination                                                                      

K07C6.5 K07C6.5 P W All gene names: cyp-35A5; K07C6.5; 5E415; CE17176; NM_071691; WBGene00019473; WP:CE17176 WormBase description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              ReichertK et al 2005 T1 xenobiotic                                
                                              induced P450                                                                       

K07E3.8 K07E3.8 P W All gene names: vem-1; K07E3.8; CE21027; CE34578; WBGene00006890; WP:CE21027; WP:CE34578; XI706
                                              
Member of lists (Publications lists):
                                              McCarroll et al 2004  SFig5 conserved                             
                                              w/ yeast, McCarroll et al 2004  SFig1-4 conserved w/                               
                                              Drosoph, Murphy et al 2003  Fig2 Class1 elongate                                   
                                              lifespan, ReichertK et al 2005 T1 xenobiotic induced                               
                                              P450, ViswanathanM et al 2005  S2 sir-2.1 regulated                                

T13C5.1 T13C5.1 P W All gene names: cyp-22A1; daf-9; mig-8; T13C5.1; CE27206; CE30451; NM_171699; WBGene00000905; WP:CE27206; WP:CE30451; XG819 WormBase description: daf-9 encodes a cytochrome P450 of the CYP2 subfamily that by homology is predicted to function as a steroidogenic or fatty acid hydroxylase; DAF-9 likely functions cell nonautonomously in hypodermal and neuronal cells to produce, for the DAF-12 nuclear receptor, a lipophilic hormone whose presence is necessary for bypassing entry into the alternative L3/dauer larval stage and promoting reproductive development; in regulating dauer formation, daf-9 acts downstream of the DAF-2/insulin/IGF receptor and the DAF-7/TGFbeta ligand, suggesting that at least two of the signaling pathways that control dauer formation converge, in part, upon daf-9; in addition, daf-9 activity is required for gonadal cell migration; a DAF-9::GFP fusion is expressed in the XXXL/R head cells at all developmental stages, in hypodermal cells from the L2 to L4 larval stages, and in the spermatheca of adult hermaphrodites. WormBase CDS description: cytochrome P450
                                              
Member of lists (Publications lists):
                                              Menzel et al 2001  T3 CYP genes,                                  
                                              ReichertK et al 2005 T1 xenobiotic induced P450,                                   
                                              ViswanathanM et al 2005  S2 sir-2.1 regulated,                                     
                                              ViswanathanM et al 2005  S2 daf-16 Resveratrol