Gene list file name: | Romagnolo2002.Fig3b_82signaling.txt |
---|---|
Type of gene identifier: | MA primer pair (sjj) |
Description: | Romagnolo et al 2002 Fig3b 82 signaling |
Organism: | Caenorhabditis elegans (nematode) |
Gene list type: | Experimental |
Gene name Source Gene ID Annotation Date Added by
B0212.5 B0212.5 P W All gene names: nss-2; osm-9; B0212.5; 4E316; CE20445; NM_067971; WBGene00003889; WP:CE20445 WormBase description: The osm-9 gene encodes a capsaicin receptor homolog involved in sensory responses to a subset of chemical stimuli and to ASH neuron-mediated osmotic and mechanical stimuli; OSM-9 is also involved in adaptation to volatile odorants and salts. WormBase CDS description: olfacory channel
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
B0285.9 B0285.9 P W All gene names: ckb-2; B0285.9; 3F459; CE33591; NM_065479; WBGene00000512; WP:CE33591 WormBase description: choline kinase
Member of lists (Publications lists):
Jones et al 2001 Non dauer genes P<0.05, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, Romagnolo et al 2002 Fig5 genes in let-60 timecour, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Early genes, Wang et al 2003 S4 genes pass two-wayANOVA P0
B0432.5 B0432.5 P W All gene names: cat-2; B0432.5; 2A549; CE32103; CE37742; NM_061287; NM_182103; WBGene00000296; WP:CE32103; WP:CE37742 WormBase description: cat-2 encodes a putative tyrosine hydroxylase that affects dopamine levels that in turn affect locomotory slowing in response to food; expressed in dopamanergic as well as other neurons, male spicules, and male ray neurons.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Portman et al 2004 T1 10 previously-known ray gene, Romagnolo et al 2002 Fig3b signaling
C01B7.4 C01B7.4 P W All gene names: tag-117; C01B7.4; 5J272; CE06728; WBGene00006467; WP:CE06728 WormBase description: This gene encodes a protein predicted by Eisenberg and coworkers, with 68% accuracy, to be mitochondrial. WormBase CDS description: guanylate kinase
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster B, Romagnolo et al 2002 Fig3b signaling
C01F1.4 C01F1.4 P W All gene names: C01F1.4; 2E569; CE06745; WBGene00015299; WP:CE06745
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
C02H7.2 C02H7.2 P W All gene names: C02H7.2; CE06758; WBGene00015364; WP:CE06758; XB352
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
C07G3.7 C07G3.7 P W All gene names: srbc-35; C07G3.7; 5D968; NM_071574; WBGene00015575
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol, ViswanathanM et al 2005 S2 Resveratrol regulate WT
C09D8.1 C09D8.2 P W All gene names: ptp-3; ptp-3A; ptp-3B; ypp-1; C09D8.1; 2L301; CE30244; CE30245; CE32793; WBGene00004215; WP:CE30244; WP:CE30245; WP:CE32793; YPP/1 WormBase description: ptp-3 encodes a receptor-like tyrosine phosphatase orthologous to the LAR (Leukocyte Common Antigen Related, OMIM:179590) subfamily of receptor-like tyrosine phosphatases that contain extracellular immunoglobulin-like and fibronectin type III domains and have been implicated in linking cell adhesion to intracellular phosphotyrosine levels; PTP-3 plays a role in gastrulation and epidermal development and functions partly redundantly with the VAB-1 Eph receptor and ephrins VAB-2 and EFN-4 to regulate embryonic morphogenesis; PTP-3 is expressed in many tissues during early embryogenesis, but expression later becomes localized to neuronal processes and epithelial adherens junctions.
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
C13D9.4 C13D9.4 P W All gene names: srsx-11; C13D9.4; 5F456; CE38148; NM_071937; WBGene00015736; WP:CE38148 WormBase description: 7TM chemoreceptor, srsx family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
C16D6.2 C16D6.2 P W All gene names: C16D6.2; CE37317; WBGene00007635; WP:CE37317; XN154 WormBase description: 7 transmembrane receptor (rhodopsin family)
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S6 removed genes of contamination
C17B7.1 C17B7.1 P W All gene names: str-63; C17B7.1; 5D831; CE16849; NM_071530; WBGene00006126; WP:CE16849 WormBase description: 7TM chemoreceptor, str family
Member of lists (Publications lists):
Murphy et al 2003 Fig2 Class2 shorten lifespan, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
C17F4.6 C17F4.6 P W All gene names: gcy-19; C17F4.6; 2D542; CE36790; NM_062090; WBGene00001544; WP:CE36790 WormBase description: gcy-19 encodes a predicted transmembrane guanylyl cyclase; as loss of gcy-19 activity via RNA-mediated interference does not result in any abnormalities, the precise role of GCY-19 in C. elegans development and/or behavior is not yet known; by sequence similarity, however, GCY-19 can be predicted to function in chemosensory signal transduction. WormBase CDS description: guanylate cyclase
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
C18F10.4 C18F10.4 P W All gene names: srg-1; C18F10.4; 3H344; CE33270; NM_065965; WBGene00005159; WP:CE33270 WormBase description: 7TM chemoreceptor, srg family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig5 genes in let-60 timecour, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
C29A12.4 C29A12.4 P W All gene names: C29A12.4; 5L325; CE25791; NM_073366; WBGene00007799; WP:CE25791 WormBase description: neurexin I like
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
C31A11.3 C31A11.3 P W All gene names: srbc-83; C31A11.3; 5Q773; CE38039; NM_074715; WBGene00007831; WP:CE38039 WormBase description: 7TM receptor, srbc family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
C33F10.8 C33F10.8 P W All gene names: C33F10.8; 2F114; CE29695; WBGene00016356; WP:CE29695 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. WormBase CDS description: protein tyrosine phosphatase
Member of lists (Publications lists):
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt males vs glp4 male enriched , Reinke et al 2004, spermatogenesis enriched genes, Reinke et al 2004, fem3 enriched genes, Reinke et al 2004, shared sperm, Romagnolo et al 2002 Fig3b signaling
C36C5.2 C36C5.2 P W All gene names: srab-8; C36C5.2; 5D647; CE08591; NM_071474; WBGene00016471; WP:CE08591 WormBase description: 7TM chemoreceptor, srab family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
C36C5.6 C36C5.6 P W All gene names: srab-9; C36C5.6; 5D618; CE08595; NM_071461; WBGene00016475; WP:CE08595 WormBase description: 7TM chemoreceptor, srab family
Member of lists (Publications lists):
Lund et al 2002 Fig1 aging-regulated genes, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
C36E8.4 C36E8.4 P W All gene names: C36E8.4; 3F107; CE31439; WBGene00007983; WP:CE31439
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
C38C3.4 C38C3.4 P W All gene names: C38C3.4; 5B961; CE30257; CE35255; WBGene00016513; WP:CE30257; WP:CE35255 WormBase description: protein kinase
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
C44C3.1 C44C3.1 P W All gene names: srw-124; C44C3.1; 5D455; CE08707; NM_071409; WBGene00005871; WP:CE08707 WormBase description: 7TM chemoreceptor, srw family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C44C3.6 C44C3.6 P W All gene names: srw-117; C44C3.6; 5D458; CE08712; NM_071411; WBGene00005864; WP:CE08712 WormBase description: 7TM chemoreceptor, srw family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
C50B6.10 C50B6.10 P W All gene names: str-4; C50B6.10; 5N820; CE15727; NM_073906; WBGene00006072; WP:CE15727 WormBase description: 7TM receptor
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
C50E10.8 C50E10.8 P W All gene names: sre-56; C50E10.8; 2M615; CE19762; NM_064216; WBGene00016831; WP:CE19762 WormBase description: 7TM chemoreceptor, sre family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
F14F4.1 F14F4.1 P W All gene names: F14F4.1; CE17670; WBGene00008808; WP:CE17670; XP542 WormBase description: 7 transmembrane receptor (rhodopsin family)
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
F14F8.7 F14F8.7 P W All gene names: srw-36; F14F8.7; 5R163; CE18591; NM_074823; WBGene00005783; WP:CE18591 WormBase description: 7TM chemoreceptor, srw family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F19B2.3 F19B2.3 P W All gene names: srw-39; F19B2.3; F19B2.F; 5U638; CE39725; NM_075487; WBGene00005786; WP:CE39725 WormBase description: 7TM chemoreceptor, srw family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
F20E11.2 F20E11.2 P W All gene names: srsx-2; F20E11.2; 5R916; CE38173; NM_075009; WBGene00008982; WP:CE38173
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
F21F8.8 F21F8.8 P W All gene names: str-137; F21F8.8; 5I756; NR_000556; WBGene00006185
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
F22B8.3 F22B8.3 P W All gene names: F22B8.3; 5Q569; CE15881; WBGene00009046; WP:CE15881
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
F22F7.5 F22F7.5 P W All gene names: ckb-4; F22F7.5; 5C584; CE17695; NM_071172; WBGene00000514; WP:CE17695 WormBase description: choline kinase
Member of lists (Publications lists):
Reinke et al 2004, list of genes in cluster order, Reinke et al 2004, list of genes in cluster C, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F22H10.1 F22H10.1 P W All gene names: F22H10.1; CE35505; WBGene00017725; WP:CE35505; XR315 WormBase description: protein kinase
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
F25G6.3 F25G6.3 P W All gene names: acr-16; F25G6.3; 5J43; CE09639; CE32878; Ce21; NM_072806; WBGene00000055; WP:CE09639; WP:CE32878 WormBase description: acr-16 encodes an alpha-7-like homomer-forming subunit of the nicotinic acetylcholine receptor (nAChR) superfamily orthologous to human nicotinic cholinergic receptor alpha 7 (CHRNA7; OMIM:118511; possibly associated with schizophrenia and juvenile myoclonic epilepsy); ACR-16 functions as a ligand-gated ion channel that probably regulates fast action of acetylcholine at neuromuscular junctions and in the nervous system; ACR-16 is active as a homomeric receptor and responds robustly to acetylcholine when expressed in Xenopus oocytes.
Member of lists (Publications lists):
Lund et al 2002 Fig3B neuro-specific genes, Romagnolo et al 2002 Fig3b signaling, Wang et al 2003 S4 TransientList, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
F26D2.7 F26D2.7 P W All gene names: str-55; F26D2.7; 5Q896; CE17704; NM_074748; WBGene00006120; WP:CE17704
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F35E2.7 F35E2.7 P W All gene names: F35E2.7; 1M306; CE17776; WBGene00009414; WP:CE17776
Member of lists (Publications lists):
Romagnolo et al 2002 Fig5 genes in let-60 timecour, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F36G9.5 F36G9.5 P W All gene names: sru-22; F36G9.5; 5Q450; CE15982; NM_074604; WBGene00005685; WP:CE15982 WormBase description: 7TM receptor
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
F39B2.5 F39B2.5 P W All gene names: F39B2.5; F39B2.5.1; F39B2.5.2; 1P354; CE34485; WBGene00009556; WP:CE34485 WormBase description: Src homology domain 2
Member of lists (Publications lists):
Reinke et al 2004, intrinsic, Reinke et al 2004, wt vs glp-4 enriched genes, Romagnolo et al 2002 Fig3b signaling
F40H7.2 F40H7.2 P W All gene names: srx-108; F40H7.2; 2D995; CE10200; NM_062221; WBGene00005999; WP:CE10200 WormBase description: 7TM chemoreceptor, srx family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
F44F4.7 F44F4.7 P W All gene names: sra-12; F44F4.7; CE30668; WBGene00005038; WP:CE30668 WormBase description: 7TM chemoreceptor, sra family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
F47G9.1 F47G9.1 P W All gene names: F47G9.1; F47G9.1.1; F47G9.1.2; 5L804; CE05883; WBGene00009829; WP:CE05883 WormBase description: Fugu S31III125 protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S5 genes common to feeding ANOVA, Wang et al 2003 S3 genes pass one-way ANOVA
F52C12.4 F52C12.4 P W All gene names: F52C12.4; 4C711; CE31535; WBGene00018681; WP:CE31535
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Romagnolo et al 2002 Fig3b signaling
F53A9.5 F53A9.5 P W All gene names: F53A9.5; CE02765; WBGene00018728; WP:CE02765; XJ313 WormBase description: G-protein coupled receptor
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
F53E10.2 F53E10.2 P W All gene names: acr-17; F53E10.2; 5D91; CE10922; CE36860; WBGene00000056; WP:CE10922; WP:CE36860 WormBase description: an ortholog of alpha subunit of nicotinic acetylcholine receptor (nAChR).
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
F55C5.9 F55C5.9 P W All gene names: srh-16; F55C5.9; 5M773; CE33111; NM_073683; WBGene00005241; WP:CE33111 WormBase description: G-protein coupled receptor, srh family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
H24O09.1 H24O09.D P W All gene names: srbc-40; H24O09.1; 5B194; CE35332; NM_070903; WBGene00019242; WP:CE35332 WormBase description: 7TM chemoreceptor, srbc family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
K02E10.1 K02E10.1 P W All gene names: K02E10.1; CE39511; WBGene00019317; WP:CE39511; XD119 WormBase description: GTP-binding protein
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
K03A1.5 K03A1.5 P W All gene names: sur-5; K03A1.5; CE04713; NM_076828; WBGene00006351; WP:CE04713; XH920 WormBase description: sur-5 encodes a protein with high similarity to H. sapiens Acetoacetyl-coenzyme A synthetase; sur-5 negatively regulates let-60 during vulval induction, based on genetic analysis, and genetically synergises with lin-45 with respect to larval death, uncoordinated movement and egg-laying defects; sur-5 is strongly expressed in most cells of C. elegans, including the VPCs and is localized primarily to the nucleus. WormBase CDS description: acetyl-coenzyme A synthetase
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, Wang et al 2003 S4 Early genes, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 genes pass two-wayANOVA P0
K03D3.9 K03D3.9 P W All gene names: K03D3.9; WBGene00043407
Member of lists (Publications lists):
Romagnolo et al 2002 Fig5 genes in let-60 timecour, Romagnolo et al 2002 Fig3b signaling
K04C1.1 K04C1.1 P W All gene names: srg-37; K04C1.1; CE06085; NM_077970; WBGene00005194; WP:CE06085; XO852
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
R02D3.2 R02D3.2 P W All gene names: cogc-8; R02D3.2; 4A995; CE18096; WBGene00019820; WP:CE18096
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
R05G6.8 R05G6.8 P W All gene names: plc-4; R05G6.8; 4I274; CE07421; NM_068812; WBGene00004039; WP:CE07421 WormBase description: phospholipase
Member of lists (Publications lists):
Reinke et al 2004, wt herm vs wt male enriched gen, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
T01C4.6 T01C4.6 P W All gene names: srx-36; T01C4.6; 5H606; CE36562; NM_072406; WBGene00005927; WP:CE36562 WormBase description: 7TM chemoreceptor, srx family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
T01H10.3 T01H10.3 P W All gene names: T01H10.3; CE36663; WBGene00011356; WP:CE36663; XM735 WormBase description: nicotinic acetylcholine receptor
Member of lists (Publications lists):
Link et al 2003 T2 Abeta induced, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
T02B11.2 T02B11.2 P W All gene names: str-53; T02B11.2; 5B353; NR_000480; WBGene00006118
Member of lists (Publications lists):
Reinke et al 2004, wt vs glp-4 enriched genes, Reinke et al 2004, wt males vs glp4 male enriched , Reinke et al 2004, spermatogenesis enriched genes, Reinke et al 2004, wt herm vs wt herm enriched gen, Reinke et al 2004, fem3 enriched genes, Reinke et al 2004, shared sperm, Romagnolo et al 2002 Fig3b signaling
T02D1.4 T02D1.4 P W All gene names: T02D1.4; 4S343; CE16324; WBGene00011371; WP:CE16324
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
T05B4.5 T05B4.5 P W All gene names: srw-132; T05B4.5; 5E576; CE34987; NM_071741; WBGene00005879; WP:CE34987 WormBase description: 7TM chemoreceptor, srw family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
T05C3.4 T05C3.4 P W All gene names: grl-18; T05C3.4; 5F960; CE39030; WBGene00001727; WP:CE39030
Member of lists (Publications lists):
Jones et al 2001 Dauer specific genes P<0.05, Romagnolo et al 2002 Fig3b signaling, Wang et al 2003 S7 SAGE genes in the dataset, Wang et al 2003 S8 SAGE genes in the dauer exit
T06G6.2 T06G6.2 P W All gene names: sra-24; T06G6.2; 1N295; CE33445; NM_060819; WBGene00005050; WP:CE33445 WormBase description: 7TM chemoreceptor, sra family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
T08B6.7 T08B6.7 P W All gene names: str-170; T08B6.7; 4F641; CE17228; NM_068262; WBGene00006214; WP:CE17228 WormBase description: 7TM chemoreceptor, str family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
T09E11.7 T09E11.7 P W All gene names: T09E11.7; 1M943; CE13509; WBGene00011656; WP:CE13509
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
T12A2.13 T12A2.13 P W All gene names: srg-6; T12A2.13; 3H352; CE07482; NM_065969; WBGene00005164; WP:CE07482 WormBase description: 7TM chemoreceptor, srg family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
T23D5.7 T23D5.7 P W All gene names: str-19; T23D5.7; 5Q220; CE36206; NM_074519; WBGene00006086; WP:CE36206 WormBase description: 7TM receptor
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
T26H10.1 K03B8.10 P W All gene names: acr-4; des-2; T26H10.1; CE21208; NM_073497; WBGene00000955; WP:CE21208 WormBase description: des-2 encodes an alpha subunit of nicotinic acetylcholine receptor (nAChR), predicted to be a ligand-gated ion channel regulating the fast action of acetylcholine at neuromuscular junctions and in the nervous system; DES-2 is coexpressed with and genetically interacts with DEG-3, which which it probably forms heteromultimers, and DES-2 falls into the 'DEG-3' class of nAChR subunits, probably unique to nematodes, which includes DEG-3, ACR-5, ACR-17, ACR-18 ACR-20, and ACR-23. WormBase CDS description: nicotinic acetylcholine receptor
Member of lists (Publications lists):
Lund et al 2002 Fig3B neuro-specific genes, Romagnolo et al 2002 Fig3b signaling
T26H2.7 T26H2.7 P W All gene names: T26H2.7; 5T697; CE16492; WBGene00012068; WP:CE16492
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
T28F12.3 T28F12.3 P W All gene names: let-341; sos-1; T28F12.3; T28F12.B; Y61A9LA_73.A; 5E996; CE36328; NM_071834; WBGene00004947; WP:CE36328 WormBase description: The sos-1 gene, also known as let-341, encodes an ortholog of Son of sevenless, a guanine nucleotide exchange factor that affects viability, sex myoblast migration, vulval induction, and oogenesis; it acts genetically downstream of let-23 and upstream of let-60 with respect to vulval development.
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
W03F11.2 W03F11.2 P W All gene names: gcy-17; gcy-24; W03F11.2; 1C790; CE32226; NM_058542; WBGene00001542; WP:CE32226 WormBase description: gcy-17 encodes a predicted guanylate cyclase.
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
W09C3.1 W09C3.1 P W All gene names: W09C3.1; 1F287; CE39114; WBGene00021109; WP:CE39114 WormBase description: serine/threonine protein kinase
Member of lists (Publications lists):
Reinke et al 2004, mixed sperm soma, Reinke et al 2004, GO categories, Reinke et al 2004, fem3 enriched genes, Romagnolo et al 2002 Fig3b signaling
Y102A5C.22 Y102A5C.22 P W All gene names: srx-54; Y102A5C.22; 5R455; CE36333; NM_074892; WBGene00005945; WP:CE36333 WormBase description: 7TM receptor, srx family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol
Y32B12B.3 Y32B12B.3 P W All gene names: srbc-65; Y32B12B.3; 5R31; CE19064; NM_074788; WBGene00012523; WP:CE19064 WormBase description: 7TM receptor, srbc family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
Y48B6A.7 Y48B6A.15 P W All gene names: ace-4; Y48B6A.7; Y48B6A.H; Y48B6A.I; 2O495; CE26734; NM_064561; WBGene00000038; WP:CE26734 WormBase description: ace-4 encodes an divergent acetylcholinesterase homolog with biochemically undetectable activity. WormBase CDS description: acetylcholinesterase
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
Y4C6A.2 Y4C6A.H P W All gene names: Y4C6A.2; 4G215; CE31736; CE31737; WBGene00021152; WP:CE31736; WP:CE31737 WormBase description: glutamate receptor
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
Y57A10B.4 Y57A10B.4 P W All gene names: sre-42; Y57A10B.4; 2M676; CE37942; NM_064226; WBGene00013276; WP:CE37942 WormBase description: 7TM receptor, sre family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
Y9C9A.4 Y9C9A_54.F P W All gene names: str-169; Y9C9A.4; 4F707; CE25654; CE38255; WBGene00006213; WP:CE25654; WP:CE38255 WormBase description: 7TM chemoreceptor, str family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
ZC204.15 ZC204.15 P W All gene names: srw-97; ZC204.15; 2B958; CE15112; NM_061633; WBGene00005844; WP:CE15112 WormBase description: 7TM chemoreceptor, srw family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
ZC412.2 ZC412.2 P W All gene names: gcy-14; ZC412.2; 5P338; CE15213; NM_074259; WBGene00001540; WP:CE15213 WormBase description: gcy-14 encodes a predicted transmembrane guanylyl cyclase; the precise role of GCY-14 in C. elegans development and/or behavior is not yet known; however, by sequence similarity GCY-14 can be predicted to function in chemosensory signal transduction. WormBase CDS description: guanylate cyclase
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
ZC482.6 ZC482.6 P W All gene names: srw-10; ZC482.6; 3N841; CE33901; NM_067257; WBGene00005757; WP:CE33901 WormBase description: 7TM chemoreceptor, srw family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated, ViswanathanM et al 2005 S2 daf-16 Resveratrol
ZC506.4 ZC506.4 P W All gene names: mgl-1; ZC506.4; CE01682; NM_077273; WBGene00003232; WP:CE01682; XK586 WormBase description: mgl-1 encodes a Group II metabotropic glutamate receptor (OMIM:604099, loss-of-function mutations in mice are associated with defects in long-term depression); by homology, MGL-1 is predicted to function as a pre-synaptic G protein-coupled receptor that, in response to glutamate binding, inhibits adenylyl cyclase activity; loss of mgl-1 activity via large-scale RNAi screens indicates that, in C. elegans, MGL-1 is required for normal post-embryonic growth rates; an mgl-1::GFP reporter is expressed in interneurons, motor neurons, and pharyngeal neurons. WormBase CDS description: metatrophic glutamate receptor
Member of lists (Publications lists):
McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 daf-16 Resveratrol, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0
ZC84.1 ZC84.1 P W All gene names: ZC84.1; 3K290; CE15020; WBGene00013846; WP:CE15020 WormBase description: Serine protease inhibitor, Kunitz type
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling
ZK287.4 ZK287.4 P W All gene names: ZK287.4; 5K158; CE06613; WBGene00013965; WP:CE06613 WormBase description: serine protease inhibitor
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 LateList, Wang et al 2003 S4 genes pass two-wayANOVA P0
ZK455.2 ZK455.2 P W All gene names: gcy-9; ZK455.2; CE03813; NM_077496; WBGene00001536; WP:CE03813; XL950 WormBase description: guanylate cyclase
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, ViswanathanM et al 2005 S2 sir-2.1 regulated
ZK792.6 ZK792.6 P W All gene names: let-60; lin-34; ZK792.6; 4M454; CE03827; NM_069812; WBGene00002335; WP:CE03827 WormBase description: The let-60 gene encodes a member of the GTP-binding RAS protooncogene family that affects viability, vulval development, spicule development, germ line meiotic progression, posterior development of the hypodermis, and chemotaxis; it acts genetically downstream of let-23 with respect to vulval development and upstream of the MAPK pathway with respect to chemotaxis, and is expressed in neural, muscle, and hypodermal lineages. WormBase CDS description: LET-60 RAS protein
Member of lists (Publications lists):
McCarroll et al 2004 SFig5 conserved w/ yeast, McCarroll et al 2004 SFig1-4 conserved w/ Drosoph, Romagnolo et al 2002 Fig3b signaling
ZK84.6 ZK84.6 P W All gene names: ins-6; ZK84.6; 2G287; CE15253; NM_062797; WBGene00002089; WP:CE15253 WormBase description: ins-6 encodes predicted type-beta insulin-like molecule that lacks a C peptide domain; expressed throughout development and in some neurons beginning in the two-fold elongated embryo. WormBase CDS description: 7TM chemoreceptor, ins family
Member of lists (Publications lists):
Romagnolo et al 2002 Fig3b signaling, Wang et al 2003 S3 genes pass one-way ANOVA, Wang et al 2003 S4 Dauer Enriched, Wang et al 2003 S4 genes pass two-wayANOVA P0