Liu et al 2005, Regulatory genes regulated by TGF, 50 genes

Gene list file name:Liu2005_table4
Type of gene identifier:Cosmid name
Description:Regulatory genes regulated by TGF-beta signaling, grouped by gene family or pathway  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

K08D9.3 apx-1 P W
C24G6.7 C24G6.7 P W All gene names: grl-1; C24G6.7; 5G10; CE17463; NM_072059; WBGene00001710; WP:CE17463 WormBase description: grl-1 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich region, and a C-terminal Ground-like (Grl) domain; GRL-1 is expressed in intestine, neurons, and larval arcade cells; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
C30F12.6 C30F12.6 P W All gene names: C30F12.6; 1H569; CE16886; WBGene00016265; WP:CE16886 WormBase description: seven trans-membrane receptor
C56A3.1 C56A3.1 P W All gene names: grl-17; C56A3.1; 5O42; CE09029; NM_073958; WBGene00001726; WP:CE09029 WormBase description: grl-17 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-17 is expressed in pharynx, rectal epithelium, amphid socket cells, larval arcade cells, and larval hypodermis; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
F18H3.5 cdk-4 P W
T25F10.2 dbl-1 P W
F42C5.7 F42C5.7 P W All gene names: grl-4; F42C5.7; 4I74; CE34016; NM_068765; WBGene00001713; WP:CE34016 WormBase description: grl-4 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-4 is expressed in pharynx, reproductive system, vulva, larval neurons, and larval rectal epithelium; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
F45B8.2 F45B8.2 P W All gene names: rgs-10; tag-215; F45B8.2; CE10430; NM_078081; WBGene00004353; WBGene00009719; WP:CE10430; XP581 WormBase description: phosphoprotein RGP4 like
F47C12.1 F47C12.1 P W All gene names: F47C12.1; 4E763; CE10670; WBGene00018546; WP:CE10670
T03D8.5 gcy-22 P W
T07D1.1 gcy-31 P W
M04G12.3 gcy-34 P W
C55H1.2 gpa-10 P W
T01B10.2 grd-14 P W
T18H9.1 grd-6 P W
F46H5.6 grd-7 P W
K03B8.7 K03B8.7 P W All gene names: grl-3; K03B8.7; 5L889; CE06081; NM_073495; WBGene00001712; WP:CE06081 WormBase description: grl-3 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-3 is expressed in intestine, larval renal gland cells, and larval neurons; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
K08B4.1 lag-1 P W
K03E6.1 lim-6 P W
F02E9.2 lin-28 P W
W03C9.4 lin-29 P W
F11C1.6 nhr-25 P W
C27C7.4 nhr-73 P W
C27C7.3 nhr-74 P W
F09G8.4 npc-2 P W
ZK328.5 npp-10 P W
Y110A2AL.8 ptc-3 P W
F56C11.2 ptr-11 P W
T21H3.2 ptr-16 P W
Y38F1A.3 ptr-18 P W
ZK270.1 ptr-23 P W
C54A12.1 ptr-6 P W
R03D7.5 R03D7.5 P W All gene names: R03D7.5; 2L239; CE35899; WBGene00010991; WP:CE35899 WormBase description: serine/threonine kinase
R52.7 srh-195 P W
T04C12.2 srh-75 P W
F07G11.5 srj-32 P W
C08F11.4 sru-21 P W
T02E9.2 T02E9.2 P W All gene names: grl-7; T02E9.2; 5L826; CE13064; CE38539; NM_073481; O18015_CAEEL; WBGene00001716; WP:CE13064; WP:CE38539 WormBase description: grl-7 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-7 is expressed in intestine, hypodermis, and seam cells; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
F36F2.5 tax-2 P W
W02C12.1 W02C12.1 P W All gene names: W02C12.1; 4E777; CE14412; WBGene00020928; WP:CE14412 WormBase description: EGF-like protein
ZK1290.12 wrt-1 P W
F52E4.6 wrt-2 P W
ZK678.5 wrt-4 P W
ZK377.1 wrt-6 P W
ZK1037.10 wrt-7 P W
C29F3.2 wrt-8 P W
Y71H2B.7 Y71H2B.7 P W All gene names: gpa-17; Y71H2B.7; 3D677; CE24633; WBGene00022196; WP:CE24633 WormBase description: gpa-17 encodes a divergent Gq alpha subunit paralogous to EGL-30; gpa-17 is reported to be expressed in intestine, but has no known function in vivo.
Y75B8A.20 Y75B8A.20 P W All gene names: grl-15; Y75B8A.20; Y75B8A.W; 3N322; CE23031; NM_067191; WBGene00001724; WP:CE23031 WormBase description: grl-15 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-15 is expressed in the reproductive system, vulva, and larval hypodermis; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
ZC168.5 ZC168.5 P W All gene names: grl-21; ZC168.5; 4L503; CE06571; NM_069587; WBGene00001730; WP:CE06571 WormBase description: grl-21 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-21 is expressed in arcade cells and hypodermis; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
ZC487.4 ZC487.4 P W All gene names: grl-9; ZC487.4; 5H210; CE07606; NM_072305; WBGene00001718; WP:CE07606 WormBase description: grl-9 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.