Liu et al 2005, Regulated regulatory genes, 243 genes

Gene list file name:Liu2005_supps4
Type of gene identifier:Cosmid name
Description:Regulated regulatory genes. This table lists all transcription factors, signaling molecules, possible hormone biosynthetic enzymes, and other regulatory genes that are significantly regulated in our data.  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

C10F3.3 acy-2 P W
AH9.1 AH9.1 P W All gene names: AH9.1; CE40671; WBGene00014998; WP:CE40671; XC862 WormBase description: transmembrane domain of family 1 of G-protein coupled receptors
K07C11.2 air-1 P W
F15H10.3 apc-10 P W
K08D9.3 apx-1 P W
B0213.10 B0213.10 P W All gene names: cyp-34A5; B0213.10; 5E430; CE16781; NM_071698; WBGene00015040; WP:CE16781 WormBase description: cytochrome P450
B0213.11 B0213.11 P W All gene names: cyp-34A6; B0213.11; 5E432; CE35205; NM_071699; WBGene00015041; WP:CE35205 WormBase description: cytochrome P-450
B0213.14 B0213.14 P W All gene names: cyp-34A8; B0213.14; 5E444; CE16784; NM_071701; WBGene00015043; WP:CE16784 WormBase description: cytochrome P450
B0213.15 B0213.15 P W All gene names: ccp-34A9; cyp-34A9; dod-16; B0213.15; 5E446; CE30582; CE39545; CE39546; NM_071702; WBGene00015044; WP:CE30582; WP:CE39545; WP:CE39546 WormBase description: cytochrome P450
B0252.2 B0252.2 P W All gene names: asm-1; B0252.2; 2H201; ASM1_CAEEL; CE30230; NM_063014; WBGene00000211; WP:CE30230 WormBase description: asm-1 encodes a protein similar to human acid sphingomyelinase (ASM) or sphingomyelin phosphodiesterase; the ASM-1 protein has a putative secretory signal peptide at the N-terminus, saposin-like and proline-rich domains and putative N-linked glycosylation sites; asm-1 shows phosphodiesterase activity when expressed in COS-7 cells; while mammalian ASM is detected as both intracellular and secreted forms, asm-1 was detected exclusively in the secreted form; northern blot analysis indicates that asm-1 is expressed at higher levels in the embryo compared with other stages. WormBase CDS description: Spingomyelin phosphodiesterase
B0304.1 B0304.1 P W All gene names: hlh-1; B0304.1; 2E811; CE02423; CE30067; CE31766; MyoD1; WBGene00001948; WP:CE02423; WP:CE30067; WP:CE31766 WormBase description: hlh-1 encodes a basic helix-loop-helix (bHLH) transcription factor that is the sole C. elegans member of the myogenic regulatory factor (MRF) subgroup of bHLH proteins; in C. elegans, HLH-1 activity is required during embryonic development for the proper differentiation and function of body wall muscle cells, indicating that unlike its vertebrate counterparts, hlh-1 is not absolutely required for body wall muscle specification; however, ectopic expression of hlh-1 in the embryo is sufficient to convert nearly all embryonic cell types to a muscle-like fate; in regulating body wall muscle cell development in some cell lineages, hlh-1 likely lies downstream of the PAL-1 homeodomain protein that is required for specification of the C and D founder cell fates; HLH-1 is expressed in nuclei and first appears in body wall muscle precursors beginning at the ~80-cell stage of embryogenesis; expression then continues in these cells and their differentiated descendants throughout embryonic, larval, and adult stages of development. WormBase CDS description: helix-loop-helix transcription factor
B0395.2 B0395.2 P W All gene names: B0395.2; CE02943; WBGene00007174; WP:CE02943; XQ647 WormBase description: Sterol O-acyltransferase
C03G6.10 C03G6.10 P W All gene names: nhr-148; C03G6.10; 5H823; CE07884; WBGene00015396; WP:CE07884 WormBase description: C4-type zinc finger protein
C03G6.14 C03G6.14 P W All gene names: cyp-35A1; C03G6.14; 5H838; CE36781; NM_072478; WBGene00015399; WP:CE36781
C04A11.3 C04A11.3 P W All gene names: gck-4; tag-334; C04A11.3; CE07905; WBGene00007287; WP:CE07905; XO299 WormBase description: serine/threonine kinase
C06G4.5 C06G4.5 P W All gene names: C06G4.5; 3J80; CE38997; WBGene00015559; WP:CE38997 WormBase description: G-protein coupled receptor
C12D5.7 C12D5.7 P W All gene names: cyp-33A1; C12D5.7; 5I160; CE06809; NM_072587; WBGene00015709; WP:CE06809 WormBase description: cytochrome P450
C14C11.5 C14C11.5 P W All gene names: srx-117; C14C11.5; 5G125; CE06824; NM_072086; Q17975_CAEEL; WBGene00006008; WP:CE06824 WormBase description: 7TM chemoreceptor, srx family
C14C6.4 C14C6.4 P W All gene names: nhr-155; C14C6.4; 5B19; CE08159; WBGene00015758; WP:CE08159 WormBase description: zinc finger protein
C15H11.5 C15H11.5 P W All gene names: set-31; tag-338; C15H11.5; 5O899; CE08182; WBGene00007615; WP:CE08182
C16A11.3 C16A11.3 P W All gene names: C16A11.3; 2E523; CE19353; WBGene00015816; WP:CE19353 WormBase description: protein kinase
C17E7.1 C17E7.1 P W All gene names: nhr-156; C17E7.1; 5E381; CE08261; WBGene00015897; WP:CE08261 WormBase description: zinc-finger protein
C17H12.9 C17H12.9 P W All gene names: ceh-48; C17H12.9; 4H577; CE16869; O45080_CAEEL; WBGene00015934; WP:CE16869 WormBase description: C17H12.9 encodes a ONECUT class CUT homeobox protein with a single N-terminal cut domain; the cut domain may be a compact DNA-binding domain composed of alpha helices; C17H12.9 is strongly affiliated with, and may be orthologous to, Drosophila ONECUT and mammalian HNF6 proteins; C17H12.9 has no obvious function in mass RNAi assays. WormBase CDS description: homeobox protein
C24G6.7 C24G6.7 P W All gene names: grl-1; C24G6.7; 5G10; CE17463; NM_072059; WBGene00001710; WP:CE17463 WormBase description: grl-1 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich region, and a C-terminal Ground-like (Grl) domain; GRL-1 is expressed in intestine, neurons, and larval arcade cells; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
C25E10.12 C25E10.12 P W All gene names: C25E10.12; 5J542; CE06874; WBGene00016101; WP:CE06874
C25E10.2 C25E10.2 P W All gene names: cyp-33B1; C25E10.2; 5J521; CE35248; NM_072941; WBGene00016092; WP:CE35248 WormBase description: cytochrome P450
C27C7.8 C27C7.8 P W All gene names: nhr-259; C27C7.8; 1M25; CE18538; WBGene00007770; WP:CE18538
C27D8.1 C27D8.1 P W All gene names: C27D8.1; 4N483; CE18539; WBGene00007777; WP:CE18539 WormBase description: serine/threonine kinase
C30B5.5 C30B5.5 P W All gene names: C30B5.5; 2G490; CE02524; WBGene00016246; WP:CE02524
C30F12.6 C30F12.6 P W All gene names: C30F12.6; 1H569; CE16886; WBGene00016265; WP:CE16886 WormBase description: seven trans-membrane receptor
C31B8.1 C31B8.1 P W All gene names: C31B8.1; 5D409; CE38946; WBGene00016279; WP:CE38946
C32E12.3 C32E12.3 P W All gene names: osr-1; C32E12.3; 1F768; CE30495; NM_059144; WBGene00016329; WP:CE30495
C34B7.3 C34B7.3 P W All gene names: cyp-36A1; C34B7.3; 1I916; C36A1_CAEEL; CE08567; NM_059866; WBGene00007913; WP:CE08567 WormBase description: cytochrome P450
C34D1.1 C34D1.1 P W All gene names: C34D1.1; 5N704; CE08569; WBGene00007929; WP:CE08569 WormBase description: DM DNA binding domain
C36A4.1 C36A4.1 P W All gene names: cyp-25A1; C36A4.1; 3E921; CE37711; NM_065374; WBGene00007963; WP:CE37711 WormBase description: cytochrome P450
C36A4.2 C36A4.2 P W All gene names: cyp-25A2; C36A4.2; 3E925; CE37617; NM_065375; WBGene00007964; WP:CE37617 WormBase description: cytochrome P450
C36A4.6 C36A4.6 P W All gene names: cyp-25A4; C36A4.6; 3E940; CE03074; NM_065378; WBGene00007967; WP:CE03074 WormBase description: cytochrome P450
C41G11.1 C41G11.1 P W All gene names: C41G11.1; CE39003; CE39004; WBGene00016568; WP:CE39003; WP:CE39004; XG336
C44C10.2 C44C10.2 P W All gene names: cyp-29A1; C44C10.2; WBGene00008083; XM324
C45H4.17 C45H4.17 P W All gene names: cyp-33C2; C45H4.17; Y5H2B.F; 5C663; CE25818; NM_071193; WBGene00016697; WP:CE25818 WormBase description: cytochrome P450
C45H4.2 C45H4.2 P W All gene names: cyp-33C1; C45H4.2; 5C655; CE08736; NM_071191; WBGene00016686; WP:CE08736 WormBase description: cytochrome P450
C50H11.15 C50H11.15 P W All gene names: cyp-33C9; C50H11.15; 5D570; CE08931; NM_071445; WBGene00016860; WP:CE08931 WormBase description: cytochrome P450
C50H2.6 C50H2.6 P W All gene names: C50H2.6; 5K403; CE05484; WBGene00008242; WP:CE05484
C54D10.5 C54D10.5 P W All gene names: C54D10.5; 5M911; CE05501; WBGene00008300; WP:CE05501
C56A3.1 C56A3.1 P W All gene names: grl-17; C56A3.1; 5O42; CE09029; NM_073958; WBGene00001726; WP:CE09029 WormBase description: grl-17 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-17 is expressed in pharynx, rectal epithelium, amphid socket cells, larval arcade cells, and larval hypodermis; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
C56A3.8 C56A3.8 P W All gene names: C56A3.8; 5O41; CE40500; WBGene00008346; WP:CE40500
C56C10.8 C56C10.8 P W All gene names: icd-1; C56C10.8; 2G878; BTF3_CAEEL; CE02573; NM_062935; WBGene00002045; WP:CE02573 WormBase description: Transcription factor BTF3 (human)
C56E6.2 C56E6.2 P W All gene names: C56E6.2; 2G815; CE30372; WBGene00016970; WP:CE30372 WormBase description: GTP-binding
D1081.4 D1081.4 P W All gene names: D1081.4; 1J44; CE28544; WBGene00008382; WP:CE28544 WormBase description: guanine nucleotide binding domains
T13C5.1 daf-9 P W
F38A5.13 dnj-11 P W
T22B3.1 dpy-20 P W
E02A10.3 E02A10.3 P W All gene names: E02A10.3; 5N67; CE27751; WBGene00008453; WP:CE27751 WormBase description: calmodulin-like protein
F01D5.9 F01D5.9 P W All gene names: cyp-37A1; F01D5.9; 2O304; CE35449; NM_064538; WBGene00008499; WP:CE35449 WormBase description: Cytochrome P450
F10D11.6 F10D11.6 P W All gene names: F10D11.6; 1J22; CE23640; WBGene00008652; WP:CE23640
F10E9.4 F10E9.4 P W All gene names: F10E9.4; 3J399; CE00148; WBGene00017356; WP:CE00148
F10G2.9 F10G2.9 P W All gene names: nhr-263; F10G2.9; 5H820; CE35274; WBGene00017367; WP:CE35274 WormBase description: zinc finger protein
F13D2.3 F13D2.3 P W All gene names: F13D2.3; CE33996; WBGene00008737; WP:CE33996; XL807 WormBase description: G-protein coupled receptor
F13E6.6 F13E6.6 P W All gene names: rhgf-1; tag-118; F13E6.6; CE39724; WBGene00006468; WP:CE39724; XL314 WormBase description: tag-118/F13E6.6 is orthologous to the human gene RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 12 (ARHGEF12; OMIM:604763), which, when fused to the MLL gene (OMIM:159555), leads to primary acute myeloid leukemia. WormBase CDS description: Tiam-1 like protein
F14F7.2 F14F7.2 P W All gene names: cyp-13A11; F14F7.2; 3O111; CE15822; NM_067303; WBGene00008809; WP:CE15822 WormBase description: cytochrome P450
F14F7.3 F14F7.3 P W All gene names: cyp-13A12; F14F7.3; 3O113; CE15823; NM_067304; WBGene00008810; WP:CE15823 WormBase description: cytochrome P450
F15B9.6 F15B9.6 P W All gene names: F15B9.6; 5N495; CE09411; WBGene00008850; WP:CE09411 WormBase description: phospholipase A2
F18C5.3 F18C5.3 P W All gene names: tag-184; F18C5.3; 2G843; CE02652; WBGene00007050; WBGene00017558; WP:CE02652
F19H6.4 F19H6.4 P W All gene names: F19H6.4; CE03235; WBGene00008959; WP:CE03235; XM985 WormBase description: 3-oxo-5-alpha-steroid 4-dehydrogenase
F20A1.3 F20A1.3 P W All gene names: srsx-32; F20A1.3; 5H501; CE38172; NM_072377; WBGene00017615; WP:CE38172 WormBase description: 7TM chemoreceptor, srsx family
F20B6.1 F20B6.1 P W All gene names: F20B6.1; CE04423; WBGene00017627; WP:CE04423; XE819 WormBase description: protein tyrosine phosphatase
F21A3.2 F21A3.2 P W All gene names: F21A3.2; 5Q12; CE31909; CE40042; WBGene00008992; WP:CE31909; WP:CE40042 WormBase description: acid phosphatase
F23H11.5 F23H11.5 P W All gene names: F23H11.5; 3B528; CE09613; WBGene00000263; WP:CE09613 WormBase description: The bra-2 gene encodes a homolog of the human BMP receptor-associated molecule (BRAM1), paralogous to bra-1, that may act upon the SMA-6 TGF-beta signalling pathway.
F26A1.3 F26A1.3 P W All gene names: F26A1.3; 3F917; CE02684; WBGene00017802; WP:CE02684 WormBase description: Protein kinase
F28G4.1 F28G4.1 P W All gene names: cyp-37B1; F28G4.1; 5Q759; CE15919; NM_074708; WBGene00009226; WP:CE15919 WormBase description: cytochrome P450
F28H7.9 F28H7.9 P W All gene names: sre-6; F28H7.9; 5L242; CE37901; NM_073346; WBGene00009242; WP:CE37901 WormBase description: 7TM receptor, sre family
F38H4.4 F38H4.4 P W All gene names: F38H4.4; 4M613; CE10064; WBGene00009548; WP:CE10064 WormBase description: protein tyrosine phosphatase
F40G9.11 F40G9.11 P W All gene names: mxl-2; F40G9.11; 3A804; CE19858; NM_064772; WBGene00003510; WP:CE19858
F41B5.2 F41B5.2 P W All gene names: cyp-33C7; F41B5.2; 5C729; CE10218; NM_071217; WBGene00018260; WP:CE10218 WormBase description: cytochrome P450
F41B5.3 F41B5.3 P W All gene names: cyp-33C5; F41B5.3; 5C725; CE27379; NM_071215; WBGene00018261; WP:CE27379 WormBase description: cytochrome P450
F42A9.5 F42A9.5 P W All gene names: cyp-33E2; F42A9.5; 4J373; CE07227; NM_069069; WBGene00018334; WP:CE07227 WormBase description: cytochrome P450
F42C5.7 F42C5.7 P W All gene names: grl-4; F42C5.7; 4I74; CE34016; NM_068765; WBGene00001713; WP:CE34016 WormBase description: grl-4 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-4 is expressed in pharynx, reproductive system, vulva, larval neurons, and larval rectal epithelium; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
F42F12.3 F42F12.3 P W All gene names: F42F12.3; CE03314; Q20344_CAEEL; WBGene00009635; WP:CE03314; XM969 WormBase description: 3-oxo-5-alpha-steroid 4-dehydrogenase
F45B8.2 F45B8.2 P W All gene names: rgs-10; tag-215; F45B8.2; CE10430; NM_078081; WBGene00004353; WBGene00009719; WP:CE10430; XP581 WormBase description: phosphoprotein RGP4 like
F46G10.6 F46G10.6 P W All gene names: hlh-23; mxl-3; F46G10.6; CE05882; NM_077822; WBGene00003511; WP:CE05882; XN968 WormBase description: Helix-loop-helix DNA-binding domain
F47A4.3 F47A4.3 P W All gene names: F47A4.3; CE34188; CE37375; WBGene00009800; WP:CE34188; WP:CE37375; XK444 WormBase description: breakpoint cluster region (BCR) protein domain
F47C12.1 F47C12.1 P W All gene names: F47C12.1; 4E763; CE10670; WBGene00018546; WP:CE10670
F48D6.3 F48D6.3 P W All gene names: NATO-3; ferd-3l; hlh-13; F48D6.3; CE07260; NM_076324; WBGene00001957; WP:CE07260; XE869
F48G7.5 F48G7.5 P W All gene names: F48G7.5; 5B100; CE10762; WBGene00018616; WP:CE10762
F49C5.2 F49C5.2 P W All gene names: srx-120; F49C5.2; 2M821; CE36304; NM_064276; WBGene00006011; WP:CE36304 WormBase description: 7TM receptor, srx family
F49E11.10 F49E11.10 P W All gene names: F49E11.10; 4N823; CE05906; WBGene00009895; WP:CE05906 WormBase description: testis-specific protein TPX-1 like
F49E11.9 F49E11.9, scl-1 P W All gene names: scl-1; F49E11.9; 4N819; CE05905; NM_070101; WBGene00004742; WP:CE05905 WormBase description: testis-specific protein TPX-1 like
F49E12.10 F49E12.10 P W All gene names: F49E12.10; 2I681; CE03386; WBGene00009903; WP:CE03386 WormBase description: ERG-3 like protein
F53B7.2 F53B7.2 P W All gene names: F53B7.2; 5L475; CE05921; WBGene00009965; WP:CE05921 WormBase description: F53B7.2 encodes a homolog of the functionally active Fmrf Receptor (FR; CG2114) of D. melanogaster; it is thus possible that F53B7.2 is a receptor for one of the FMRF-like neurotransmitters in C. elegans (e.g., FLP-1 through FLP-12). WormBase CDS description: G-protein coupled receptor
F53F8.1 F53F8.1 P W All gene names: F53F8.1; 5V159; CE17855; WBGene00009998; WP:CE17855 WormBase description: The F53F8.1 gene encodes a homolog of human WT1, which when mutated leads to Wilms tumour (OMIM:194070). WormBase CDS description: Zinc finger, C2H2 type (3 domains)
F54A5.1 F54A5.1 P W All gene names: F54A5.1; F54A5.E; 1B465; CE20859; WBGene00018786; WP:CE20859
F54B8.8 F54B8.8 P W All gene names: srbc-50; F54B8.8; 5Q302; CE16110; NM_074552; WBGene00010022; WP:CE16110 WormBase description: 7TM receptor, srbc family
F57G8.6 F57G8.6 P W All gene names: nhr-193; F57G8.6; 5Q823; CE23788; WBGene00010215; WP:CE23788 WormBase description: Domain of unknown function
F57G9.1 F57G9.1 P W All gene names: sre-31; F57G9.1; 2M694; CE17917; NM_064232; WBGene00010217; WP:CE17917 WormBase description: 7TM receptor, sre family
F57H12.4 F57H12.4 P W All gene names: F57H12.4; 4I737; CE17125; WBGene00019019; WP:CE17125 WormBase description: seven trans-membrane receptor
F59E11.12 F59E11.12 P W All gene names: nhr-144; F59E11.12; 5J452; CE33120; CE35888; WBGene00019117; WP:CE33120; WP:CE35888
B0286.5 fkh-6 P W
F26D12.1 fkh-7 P W
T03D8.5 gcy-22 P W
T07D1.1 gcy-31 P W
M04G12.3 gcy-34 P W
F58A4.11 gei-13 P W
C55H1.2 gpa-10 P W
T01B10.2 grd-14 P W
F46B3.5 grd-2 P W
T18H9.1 grd-6 P W
F46H5.6 grd-7 P W
H23N18.5 H23N18.5 P W All gene names: H23N18.5; 5F386; CE40083; WBGene00019236; WP:CE40083
Y17G7A.1 hmg-12 P W
F45E4.9 hmg-5 P W
K02E10.7 K02E10.7 P W All gene names: K02E10.7; CE31194; WBGene00019321; WP:CE31194; XD120 WormBase description: protein kinase
K03B8.7 K03B8.7 P W All gene names: grl-3; K03B8.7; 5L889; CE06081; NM_073495; WBGene00001712; WP:CE06081 WormBase description: grl-3 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-3 is expressed in intestine, larval renal gland cells, and larval neurons; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
K05D4.4 K05D4.4 P W All gene names: cyp-33D1; K05D4.4; 5Q654; CE16230; NM_074675; WBGene00010589; WP:CE16230 WormBase description: cytochrome P450
K07C6.3 K07C6.3 P W All gene names: cyp-35B2; K07C6.3; 5E421; CE17174; NM_071693; WBGene00019471; WP:CE17174 WormBase description: cytochrome P450
K07C6.4 K07C6.4 P W All gene names: ccp-35B1; cyp-35B1; dod-13; K07C6.4; 5E419; CE17175; NM_071692; WBGene00019472; WP:CE17175 WormBase description: cytochrome P450
K07C6.5 K07C6.5 P W All gene names: cyp-35A5; K07C6.5; 5E415; CE17176; NM_071691; WBGene00019473; WP:CE17176 WormBase description: cytochrome P450
K08G2.7 K08G2.7 P W All gene names: srz-12; K08G2.7; 5Q338; CE11968; NM_074560; WBGene00010688; WP:CE11968
K09A11.2 K09A11.2 P W All gene names: cyp-14A1; K09A11.2; CE03473; NM_077802; WBGene00010705; WP:CE03473; XN884 WormBase description: cytochrome p450
K09A11.3 K09A11.3 P W All gene names: cyp-14A2; tag-190; K09A11.3; CE03474; NM_077803; WBGene00010706; WP:CE03474; XN886 WormBase description: Cytochrome P450
K09A11.4 K09A11.4 P W All gene names: cyp-14A3; K09A11.4; CE03475; NM_077804; WBGene00010707; WP:CE03475; XN890 WormBase description: cytochrome p450
K09C6.1 K09C6.1 P W All gene names: K09C6.1; 5B339; CE33145; WBGene00019555; WP:CE33145
K09C6.5 K09C6.5 P W All gene names: srbc-13; K09C6.5; 5B325; CE11996; NM_070939; WBGene00019559; WP:CE11996 WormBase description: 7TM chemoreceptor, srbc family
K10C8.2 K10C8.2 P W All gene names: K10C8.2; 5N169; CE06168; WBGene00010735; WP:CE06168 WormBase description: K10C8.2 encodes a homolog of the functionally active Fmrf Receptor (FR; CG2114) of D. melanogaster; it is thus possible that K10C8.2 is a receptor for one of the FMRF-like neurotransmitters in C. elegans (e.g., FLP-1 through FLP-12). WormBase CDS description: G-protein coupled receptor
K11H12.1 K11H12.1 P W All gene names: K11H12.1; 4B404; CE12146; WBGene00019658; WP:CE12146 WormBase description: DNA-binding protein
K03E6.1 lim-6 P W
F02E9.2 lin-28 P W
W03C9.4 lin-29 P W
M01B2.4 M01B2.4 P W All gene names: srbc-76; M01B2.4; 5P733; CE16266; NM_074373; WBGene00010798; WP:CE16266 WormBase description: 7TM receptor, srbc family
M02F4.1 M02F4.1 P W All gene names: M02F4.1; CE04762; WBGene00019735; WP:CE04762; XD646
F32A11.6 moe-3 P W
F54H5.4 mua-1 P W
E02H9.8 nhr-121 P W
R11G11.2 nhr-58 P W
F57A10.5 nhr-60 P W
ZK1320.10 nlp-11 P W
F33A8.2 nlp-18 P W
Y43F8C.1 nlp-25 P W
Y43F8C.2 nlp-26 P W
F30H5.2 nlp-32 P W
F59C6.6 nlp-4 P W
F09G8.4 npc-2 P W
ZK328.5 npp-10 P W
F09C3.1 pes-7 P W
C14B9.4 plk-1 P W
Y110A2AL.8 ptc-3 P W
F56C11.2 ptr-11 P W
T21H3.2 ptr-16 P W
Y38F1A.3 ptr-18 P W
ZK270.1 ptr-23 P W
C54A12.1 ptr-6 P W
R03D7.5 R03D7.5 P W All gene names: R03D7.5; 2L239; CE35899; WBGene00010991; WP:CE35899 WormBase description: serine/threonine kinase
R03H4.2 R03H4.2 P W All gene names: srx-2; R03H4.2; 5J487; CE07405; NM_072929; WBGene00005893; WP:CE07405 WormBase description: 7TM chemoreceptor, srx family
R06B10.1 R06B10.1 P W All gene names: R06B10.1; 3B582; CE17200; WBGene00019912; WP:CE17200 WormBase description: protein-tyrosine phosphatase
R06C1.1 R06C1.1 P W All gene names: hda-3; R06C1.1; 1M506; CE18116; NM_060625; WBGene00001836; WP:CE18116 WormBase description: hda-3 encodes a member of the histone deacetylase family most similar to human histone deacetylase 1 (HD1) that affects radiation sensitivity. WormBase CDS description: Histone deacetylase family
R07H5.10 R07H5.10 P W All gene names: R07H5.10; 4L978; CE28637; WBGene00011130; WP:CE28637
R09D1.12 R09D1.12 P W All gene names: R09D1.12; 2J742; CE28068; WBGene00011168; WP:CE28068 WormBase description: tyrosine-protein kinase (KIN15/KIN16 subfamily)
R10D12.4 R10D12.4 P W All gene names: srx-10; R10D12.4; 5O426; CE36316; NM_074058; WBGene00005901; WP:CE36316 WormBase description: 7TM receptor, srx family
R11F4.2 R11F4.2 P W All gene names: R11F4.2; 2E375; CE33433; CE36007; WBGene00020008; WP:CE33433; WP:CE36007
K01G5.4 ran-1 P W
F49E11.9 F49E11.9, scl-1 P W All gene names: scl-1; F49E11.9; 4N819; CE05905; NM_070101; WBGene00004742; WP:CE05905 WormBase description: testis-specific protein TPX-1 like
AH6.10 sra-6 P W
F07C4.8 srd-31 P W
ZK863.5 srd-4 P W
C34C6.1 srg-15 P W
F15A4.7 srg-17 P W
T12A2.13 srg-6 P W
R52.7 srh-195 P W
F08E10.1 srh-235 P W
T06E6.8 srh-264 P W
C03G6.7 srh-275 P W
T04C12.2 srh-75 P W
ZC239.10 sri-53 P W
Y45G12C.14 srj-19 P W
Y45G12C.15 srj-20 P W
F28H7.1 srj-22 P W
F07G11.5 srj-32 P W
T03D3.6 srj-45 P W
T03D3.12 srj-49 P W
C08F11.4 sru-21 P W
F36G9.6 sru-23 P W
F46B6.11 sru-39 P W
F53F1.9 srv-10 P W
C25F9.1 srw-85 P W
C55A1.3 str-248 P W
F22B8.5 str-7 P W
T01G5.1 T01G5.1 P W All gene names: T01G5.1; 5P598; CE12974; WBGene00011339; WP:CE12974 WormBase description: tyrosine-protein kinase (KIN15/KIN16 subfamily)
T02E9.2 T02E9.2 P W All gene names: grl-7; T02E9.2; 5L826; CE13064; CE38539; NM_073481; O18015_CAEEL; WBGene00001716; WP:CE13064; WP:CE38539 WormBase description: grl-7 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-7 is expressed in intestine, hypodermis, and seam cells; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
T05C3.1 T05C3.1 P W All gene names: T05C3.1; 5F985; WBGene00020253
T06E4.7 T06E4.7 P W All gene names: T06E4.7; 5K107; CE37849; WBGene00011534; WP:CE37849
T06E6.3 T06E6.3 P W All gene names: fbxa-199; srx-40; T06E6.3; 5P878; CE40779; NM_074426; WBGene00005931; WP:CE40779 WormBase description: srx-40 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. WormBase CDS description: 7 transmembrane receptor (rhodopsin family)
T09E11.2 T09E11.2 P W All gene names: NHR-A; nhr-217; T09E11.2; 1M933; CE13499; WBGene00011651; WP:CE13499 WormBase description: Zinc finger, C4 type (two domains)
T09H2.1 T09H2.1 P W All gene names: cyp-34A4; T09H2.1; 5E427; CE18231; NM_071696; WBGene00020386; WP:CE18231 WormBase description: cytochrome P450
T10B9.1 T10B9.1 P W All gene names: ccp-13A4; cyp-13A4; dod-1; T10B9.1; 2K84; CE01654; NM_063710; WBGene00011671; WP:CE01654 WormBase description: cytochrome P450
T10B9.10 T10B9.10 P W All gene names: ccp-13A7; cyp-13A7; T10B9.10; 2K91; CE01655; NM_063713; WBGene00000372; WP:CE01655 WormBase description: ccp-13A7 encodes a homolog of cytochrome P450 proteins; these proteins are membrane proteins with a heme prosthetic group that catalyse the synthesis of steroid hormones (and bile salts), and also detoxify foreign substances (xenobiotic compounds). WormBase CDS description: cytochrome P450
T10B9.2 T10B9.2 P W All gene names: cyp-13A5; T10B9.2; 2K86; CE01656; NM_063711; WBGene00011672; WP:CE01656 WormBase description: cytochrome P450
T10B9.3 T10B9.3 P W All gene names: cyp-13A6; T10B9.3; 2K88; CE01657; NM_063712; WBGene00011673; WP:CE01657 WormBase description: cytochrome P450
T10B9.7 T10B9.7 P W All gene names: cyp-13A2; T10B9.7; 2K74; CE01659; NM_063708; WBGene00011676; WP:CE01659 WormBase description: cytochrome P450
T10B9.8 T10B9.8 P W All gene names: cyp-13A1; T10B9.8; 2K70; CE01660; NM_063707; WBGene00011677; WP:CE01660 WormBase description: cytochrome P450
T11A5.3 T11A5.3 P W All gene names: srab-18; T11A5.3; 5K350; CE34092; NM_073144; WBGene00011702; WP:CE34092
T19D12.5 T19D12.5 P W All gene names: T19D12.5; 2G924; CE04980; WBGene00020580; WP:CE04980 WormBase description: casein kinase I
T19E7.5 T19E7.5 P W All gene names: srd-5; T19E7.5; 4G436; CE33697; NM_068444; WBGene00005083; WP:CE33697 WormBase description: 7TM chemoreceptor, srd family
T20F7.6 T20F7.6 P W All gene names: T20F7.6; CE29350; WBGene00020633; WP:CE29350; XR480 WormBase description: AMP-activated protein kinase
T26H5.2 T26H5.2 P W
T27F2.4 T27F2.4 P W All gene names: T27F2.4; 5M130; CE06522; WBGene00012101; WP:CE06522
T28F4.3 T28F4.3 P W All gene names: T28F4.3; 1I60; CE06525; WBGene00012138; WP:CE06525 WormBase description: protein-tyrosine phosphatase
W04A8.7 taf-1 P W
F36F2.5 tax-2 P W
W02C12.1 W02C12.1 P W All gene names: W02C12.1; 4E777; CE14412; WBGene00020928; WP:CE14412 WormBase description: EGF-like protein
W07G1.2 W07G1.2 P W All gene names: sre-44; W07G1.2; W07G1.B; 2O239; CE24036; NM_064517; WBGene00012329; WP:CE24036 WormBase description: 7TM receptor, sre family
W10G6.2 W10G6.2 P W All gene names: sgk-1; tag-74; W10G6.2; CE39527; CE39528; NM_078246; WBGene00004789; WP:CE39527; WP:CE39528; XQ870 WormBase description: Protein kinase C terminal domain
ZK1290.12 wrt-1 P W
F52E4.6 wrt-2 P W
ZK678.5 wrt-4 P W
ZK377.1 wrt-6 P W
ZK1037.10 wrt-7 P W
C29F3.2 wrt-8 P W
Y32F6B.3 Y32F6B.3 P W All gene names: crp-1; Y32F6B.3; 5K959; CE16612; NM_073287; WBGene00012532; WP:CE16612 WormBase description: RAS-like GTP-binding protein
Y38C9B.1 Y38C9B.1 P W All gene names: cyp-29A3; Y38C9B.1; Y38C9B.C; 5A539; CE35365; NM_070729; WBGene00021412; WP:CE35365 WormBase description: cytochrome P450
Y39C12A.4 Y39C12A.4 P W All gene names: sre-17; Y39C12A.4; 4M996; NM_069921; WBGene00012706
Y40H7A.9 Y40H7A.9 P W All gene names: Y40H7A.9; 4P967; CE21820; WBGene00012746; WP:CE21820 WormBase description: Cysteine protease
Y4C6A.1 Y4C6A.1 P W All gene names: Y4C6A.1; 4G223; CE36748; WBGene00021151; WP:CE36748 WormBase description: protein kinase
Y51B9A.9 Y51B9A.9 P W All gene names: Y51B9A.9; 2J686; CE19219; WBGene00013091; WP:CE19219 WormBase description: serine/threonine kinase
Y55H10A.2 Y55H10A.2 P W All gene names: Y55H10A.2; 4E131; CE39298; WBGene00021953; WP:CE39298
Y5H2B.5 Y5H2B.5 P W All gene names: cyp-32B1; Y5H2B.5; 5C678; CE26222; NM_071197; WBGene00021167; WP:CE26222
Y71H2B.7 Y71H2B.7 P W All gene names: gpa-17; Y71H2B.7; 3D677; CE24633; WBGene00022196; WP:CE24633 WormBase description: gpa-17 encodes a divergent Gq alpha subunit paralogous to EGL-30; gpa-17 is reported to be expressed in intestine, but has no known function in vivo.
Y75B8A.20 Y75B8A.20 P W All gene names: grl-15; Y75B8A.20; Y75B8A.W; 3N322; CE23031; NM_067191; WBGene00001724; WP:CE23031 WormBase description: grl-15 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-15 is expressed in the reproductive system, vulva, and larval hypodermis; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
ZC168.5 ZC168.5 P W All gene names: grl-21; ZC168.5; 4L503; CE06571; NM_069587; WBGene00001730; WP:CE06571 WormBase description: grl-21 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-21 is expressed in arcade cells and hypodermis; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
ZC404.11 ZC404.11 P W All gene names: ZC404.11; 5H284; CE07601; WBGene00022605; WP:CE07601
ZC455.8 ZC455.8 P W All gene names: srbc-43; ZC455.8; 5N270; CE06597; NM_073798; WBGene00013908; WP:CE06597 WormBase description: 7TM receptor, srbc family
ZC477.2 ZC477.2 P W All gene names: ZC477.2; 4H873; CE35146; WBGene00022617; WP:CE35146 WormBase description: serine/ threonine specific protein phosphatase
ZC487.4 ZC487.4 P W All gene names: grl-9; ZC487.4; 5H210; CE07606; NM_072305; WBGene00001718; WP:CE07606 WormBase description: grl-9 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
ZK1025.6 ZK1025.6 P W All gene names: nhr-244; ZK1025.6; 1M47; CE19333; WBGene00014186; WP:CE19333
ZK1320.4 ZK1320.4 P W All gene names: cyp-13A10; ZK1320.4; 2J952; C13AA_CAEEL; CE37736; NM_063684; WBGene00014254; WP:CE37736 WormBase description: cytochrome P450
ZK863.1 ZK863.1 P W All gene names: ZK863.1; 5M648; CE40187; WBGene00014122; WP:CE40187 WormBase description: 7 transmembrane receptor (rhodopsin family)