Wang et al 2003 Fig3 LateList, 325 genes

Gene list file name:Wang2003.Fig3_LateList
Type of gene identifier:MA primer pair (sjj)
Description:Wang et al 2003 Supplement4: List of Late genes. we divided the dauer exit-specific genes into five groups: dauer-enriched, transient, early, climbing and late (Fig. 3). The expression of the genes in the dauer-enriched (540 genes) group decline in the dauer exit timecourse, showing either immediate or delayed kinetics. These genes are presumably involved in dauer-specific processes, such as stress resistance or prolonged life. Four groups of genes are induced as the dauer recovers: transient (195 genes, induced earliest and transiently), early (538 genes, induced to a steady state level), climbing (386 genes, induced and increasing continually) and late (325 genes, induced late) (Fig. 3).  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

T08G5.3 0T08G5.3 P W
Y11D7A.9 0Y11D7A.9 P W
D2045.8 1D2045.8 P W
Y66A7A.6 7Y66A7A.6, C37G2.6 P W
Y11D7A.5 8Y11D7A.5 P W
B0024.1 B0024.1 P W All gene names: col-149; B0024.1; 5K772; CE05146; NM_073245; Q17417_CAEEL; WBGene00000722; WP:CE05146 WormBase description: collagen
B0205.4 B0205.4 P W All gene names: B0205.4; 1L320; CE39201; WBGene00015019; WP:CE39201 WormBase description: The B0205.4 gene encodes a homolog of the human gene FUT1, which when mutated leads to leukocyte adhesion deficiency, type II (OMIM:266265).
B0272.3 B0272.3 P W All gene names: B0272.3; CE00852; HCDH2_CAEEL; WBGene00007129; WP:CE00852; XK51 WormBase description: 3-hydroxyacyl-CoA dehydrogenase
B0310.6 B0310.6 P W All gene names: B0310.6; CE03879; WBGene00015142; WP:CE03879; XB150; YWS6_CAEEL
B0344.2 B0344.2 P W All gene names: wrt-9; B0344.2; CE33963; NM_075897; WBGene00006955; WP:CE33963; XC209 WormBase description: wrt-9 encodes a hedgehog-like protein, with an N-terminal signal sequence, a Wart domain, and a C-terminal region of proline-rich, low-complexity sequence; the Wart domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins; WRT-9 has no obvious function in RNAi assays.
B0348.5 B0348.5 P W All gene names: B0348.5; Y108G3B.A; 5A485; CE17330; WBGene00015153; WP:CE17330
B0395.2 B0395.2 P W All gene names: B0395.2; CE02943; WBGene00007174; WP:CE02943; XQ647 WormBase description: Sterol O-acyltransferase
B0491.2 B0491.2 P W All gene names: rol-5; sqt-1; B0491.2; B0491.2.1; Jul 19 07 JL B0491.2.2; 2L626; CE02104; NM_064020; Rol; SQT1_CAEEL; WBGene00005016; WP:CE02104 WormBase description: "Node #30::sqt-1/rol-5/B0491.2 Jul 19 07 JL Collagen; member of the Collagen Triple Helix Repeat (20 Copies) protein family ::LG 2(11327492)::B0491.2::21420" WormBase CDS description: cuticle collagen SQT-1
B0507.1 B0507.1 P W All gene names: B0507.1; 5J259; CE28815; Q22886_CAEEL; WBGene00015218; WP:CE28815
BE10.2 BE10.2 P W All gene names: BE10.2; 3N884; CE30592; WBGene00007210; WP:CE30592
C01B12.1 C01B12.1 P W All gene names: sqt-2; C01B12.1; 2A315; CE07789; NM_061234; WBGene00005017; WP:CE07789 WormBase description: sqt-2 encodes a collagen required for normal alae formation and body morphology; sqt-2 mutants exhibit a slightly dumpy phenotype and the bodies of mutants are helically twisted. WormBase CDS description: cuticular collagen
C01H6.1 C01H6.1, C01H6.1#2 P W All gene names: col-61; C01H6.1; 1H778; CE05184; NM_059634; WBGene00000637; WP:CE05184 WormBase description: collagen
C01H6.1 C01H6.1, C01H6.1#2 P W All gene names: col-61; C01H6.1; 1H778; CE05184; NM_059634; WBGene00000637; WP:CE05184 WormBase description: collagen
C02D5.1 C02D5.1 P W All gene names: C02D5.1; 3J649; CE24778; IVD_CAEEL; WBGene00015335; WP:CE24778 WormBase description: Isovaleryl-CoA dehydrogenase
C02F4.4 C02F4.4 P W All gene names: C02F4.4; 4L278; CE07855; WBGene00007264; WP:CE07855
C03A7.7 C03A7.7 P W All gene names: abu-6; pqn-6; C03A7.7; 5F636; CE07865; NM_071982; WBGene00000029; WP:CE07865 WormBase description: abu-6 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-6 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-6 may help protect the organism from damage by improperly folded nascent protein.
C04F1.1 C04F1.1 P W All gene names: C04F1.1; 1G304; CE17364; WBGene00015442; WP:CE17364
C05D11.6 C05D11.6 P W All gene names: nas-4; C05D11.6; 3H498; CE37080; NAS4_CAEEL; NM_066004; WBGene00003523; WP:CE37080 WormBase description: nas-4 encodes a predicted extracellular matrix metalloprotease of the M12A (astacin) family that contains an N-terminal signal sequence and a catalytic domain, but no recognizable regulatory domains in the C-terminus; as loss of nas-4 activity via RNAi results in no obvious abnormalities, the precise role of NAS-4 in C. elegans development and/or behavior is not yet known; however, an NAS-4 translational reporter is expressed in the pharynx and intestine in larvae and adults, suggesting a role for NAS-4 in digestion; NAS-4 is specifically detected within cells of the pharyngeal procorpus, metacorpus, isthmus, and terminal bulb, with extracellular expression detected in the lumen of the terminal bulb and in the gut. WormBase CDS description: zinc metalloprotease
C06C3.4 C06C3.4 P W All gene names: C06C3.4; 2J665; CE32568; WBGene00007375; WP:CE32568
C06E1.8 C06E1.8 P W All gene names: C06E1.8; 3J686; CE00063; WBGene00015523; WP:CE00063; YKQ8_CAEEL
C06G1.1 C06G1.1 P W All gene names: C06G1.1; CE27054; WBGene00015545; WP:CE27054; XR251
C06G1.2 C06G1.2 P W All gene names: C06G1.2; CE03965; WBGene00015546; WP:CE03965; XR239
C07D10.4 C07D10.4 P W All gene names: nas-7; C07D10.4; 2H690; CE34663; NAS7_CAEEL; NM_063151; WBGene00003526; WP:CE34663 WormBase description: Zinc metalloprotease
C07E3.10 C07E3.10 P W All gene names: C07E3.10; 2K637; CE15607; WBGene00007420; WP:CE15607
C09F9.4 C09F9.4 P W All gene names: C09F9.4; 2P3; CE17395; WBGene00007481; WP:CE17395
C09G5.3 C09G5.3 P W All gene names: col-79; C09G5.3; 2K993; CE01483; COL79_CAEEL; NM_063907; WBGene00000655; WP:CE01483 WormBase description: collagen
C11H1.5 C11H1.1 P W
C13C12.2 C13C12.2 P W All gene names: C13C12.2; 5N4; CE08133; WBGene00007552; WP:CE08133
C14A4.9 C14A4.9 P W All gene names: C14A4.9; C14A4.9.1; C14A4.9.2; 2K891; CE02150; WBGene00007560; WP:CE02150
C14C11.8 C14C11.8 P W All gene names: pqn-13; C14C11.8; 5G150; CE36269; NM_072093; WBGene00004104; WP:CE36269 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
C14H10.3 C14H10.3 P W All gene names: C14H10.3; CE03020; WBGene00007593; WP:CE03020; XK840 WormBase description: terminase domain
C15C6.1 C15C6.1 P W All gene names: C15C6.1; 1M795; CE18501; WBGene00007600; WP:CE18501
C16C8.2 C16C8.2 P W All gene names: C16C8.2; 2D722; CE23553; WBGene00015841; WP:CE23553 WormBase description: peroxidase precursor
C17F4.2 C17F4.2 P W All gene names: C17F4.2; 2D539; CE08275; WBGene00015910; WP:CE08275
C26B9.3 C26B9.3 P W All gene names: C26B9.3; CE29187; WBGene00016133; WP:CE29187; XF957
C26C6.3 C26C6.3 P W All gene names: nas-36; C26C6.3; 1I107; CE38281; NAS36_CAEEL; NM_059708; WBGene00003552; WP:CE38281 WormBase description: zinc metalloprotease
C26F1.5 C26F1.5 P W All gene names: grl-10; C26F1.5; 5I255; CE06879; NM_072604; WBGene00001719; WP:CE06879 WormBase description: grl-10 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground-like (Grl) domain; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
C27C7.4 C27C7.4 P W All gene names: nhr-73; C27C7.4; 1M22; CE18535; Jul 19 07 JL NM_060520; Q9XVC8_CAEEL; WBGene00003663; WP:CE18535 WormBase description: Node #24::nhr-73/C27C7.4 Member Jul 19 07 JL of the zinc finger protein family with similarity to nuclear hormone receptors ::LG 1(10691689)::C27C7.4::30078 WormBase CDS description: Zinc finger, C4 type (two domains)
C27C7.8 C27C7.8 P W All gene names: nhr-259; C27C7.8; 1M25; CE18538; WBGene00007770; WP:CE18538
C29E4.1 C29E4.1 P W All gene names: col-90; C29E4.1; 3J39; CE00083; COL90_CAEEL; NM_066328; WBGene00000665; WP:CE00083 WormBase description: Cuticle collagen
C29F3.2 C29F3.2 P W All gene names: wrt-8; C29F3.2; 5P822; CE29200; Jul 19 07 JL NM_074404; WBGene00006954; WP:CE29200; WRT8_CAEEL WormBase description: Node #34::wrt-8/C29F3.2 Has Jul 19 07 JL strong similarity to C. elegans WRT-4, a protein of unknown function ::LG 5(15266332)::C29F3.2::21531 WormBase CDS description: Hint module
C29F3.5 C29F3.5 P W All gene names: C29F3.5; 5P828; CE08439; WBGene00007806; WP:CE08439 WormBase description: Lectin C-type domain
C30G12.1 C30G12.1 P W All gene names: C30G12.1; 2H591; CE29685; WBGene00016273; WP:CE29685; YQB1_CAEEL
C31H2.2 C31H2.2 P W All gene names: dpy-8; C31H2.2; CE04130; NM_076472; WBGene00001070; WP:CE04130; XF768 WormBase description: dpy-8 encodes a collagen with a nematode-specific N-terminal domain that is required for normal body morphology and (perhaps) for a normal embryonic cell division rate; dpy-8 interacts genetically with emb-5 and glp-1. WormBase CDS description: collagen alpha (weak)
C32E12.3 C32E12.3 P W All gene names: osr-1; C32E12.3; 1F768; CE30495; NM_059144; WBGene00016329; WP:CE30495
C32H11.11 C32H11.11 P W All gene names: C32H11.11; 4N701; WBGene00007874
C32H11.5 C32H11.5 P W All gene names: C32H11.5; 4N688; CE19712; Q9XUH6_CAEEL; WBGene00007868; WP:CE19712
C32H11.6 C32H11.6 P W All gene names: C32H11.6; 4N690; CE19713; WBGene00007869; WP:CE19713
C32H11.8 C32H11.8 P W All gene names: C32H11.8; 4N696; CE19715; WBGene00007871; WP:CE19715
C33D3.3 C33D3.3 P W All gene names: C33D3.3; CE02154; WBGene00007894; WP:CE02154; XL103
C34F6.1 C34F6.1 P W All gene names: C34F6.1; CE15670; WBGene00007938; WP:CE15670; XL812 WormBase description: Kunitz/Bovine pancreatic trypsin inhibitor domain (8 domains)
C34G6.6 C34G6.6 P W All gene names: noah-1; C34G6.6; C34G6.6a.1; C34G6.6a.2; 1G452; CE29699; CE30432; WBGene00016422; WP:CE29699; WP:CE30432
Y66A7A.6 7Y66A7A.6, C37G2.6 P W
C38C6.3 C38C6.3 P W All gene names: C38C6.3; 2O919; CE15695; WBGene00007996; WP:CE15695
C38C6.6 C38C6.6 P W All gene names: tag-297; C38C6.6; C38C6.6.1; C38C6.6.2; 2O915; CE15698; WBGene00007999; WP:CE15698
C39E9.3 C39E9.3 P W All gene names: col-131; C39E9.3; 4N830; CE05386; NM_070106; WBGene00000705; WP:CE05386 WormBase description: collagen
C42D8.5 C42D8.5 P W All gene names: acn-1; C42D8.5; C42D8.5b.1; C42D8.5b.2; C42D8.5b.3; ACN1_CAEEL; CE30627; CE37212; WBGene00000039; WP:CE30627; WP:CE37212; XF712 WormBase description: acn-1 encodes an ACE-like protein required for larval development and adult morphogenesis, and probably for cell fusion in larval seam cells; ACN-1 lacks not only the HExxH consensus metallopeptidase motif, but also other active site residues found in the sequence HEAI/VxD of mammalian and insect ACEs; acn-1 is expressed in hypodermal cells, vulval precursor cells, and ray papillae in the male tail; the hypodermal expression of acn-1 appears to be controlled by nhr-23 and nhr-25.
C44H4.1 C44H4.1 P W All gene names: C44H4.1; CE35433; WBGene00008093; WP:CE35433; XP193 WormBase description: Leucine Rich Repeat (2 copies) (6 domains)
C44H4.2 C44H4.2 P W All gene names: sym-5; C44H4.2; CE08723; NM_078024; Jul 19 07 JL WBGene00006370; WP:CE08723; XP197 WormBase description: Node #24::sym-5/C44H4.2 Putative Jul 19 07 JL member of the leucine-rich repeat (LRR) protein family, synthetically lethal with mec-8 ::LG X(14316680)::C44H4.2::21592 WormBase CDS description: Drosophila chaoptin protein like
C44H4.3 C44H4.3 P W All gene names: sym-1; C44H4.3; CE08724; NM_078025; Jul 19 07 JL WBGene00006366; WP:CE08724; XP201 WormBase description: Node #24::sym-1/C44H4.3 Protein Jul 19 07 JL required for attachment of body muscle to cuticle in absence of MEC-8, member of the leucine rich repeat (LRR) protein family ::LG X(14320393)::C44H4.3::20983 WormBase CDS description: Drosophila chaoptin protein like
C45B2.7 C45B2.7 P W All gene names: ptr-4; C45B2.7; CE30905; NM_076612; WBGene00004219; WP:CE30905; XG680 WormBase description: ptr-4 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome); PTR-4 is strongly required for normal molting from L4 to adult stages male tail development (a role conserved in C. briggsae); PTR-4 is also required for normal endocytosis of yolk by oocytes, adult alae formation, growth to full size, locomotion, and viability.
C45G7.5 C45G7.6 P W
C46A5.3 C46A5.3 P W All gene names: col-14; C46A5.3; 4I519; CE08753; Jul 19 07 JL CE29723; COL14_CAEEL; NM_068872; WBGene00000603; WP:CE08753; WP:CE29723; col14 WormBase description: Node #30::col-14/col14/C46A5.3 Jul 19 07 JL Collagen ::LG 4(7391159)::C46A5.3::28026
C46H11.7 C46H11.7 P W All gene names: C46H11.7; 1F610; CE08789; WBGene00016731; WP:CE08789
C46H11.9 C46H11.9 P W All gene names: phat-2; C46H11.9; 1F614; CE08791; WBGene00016733; WP:CE08791
C50B6.4 C50B6.4 P W All gene names: col-161; C50B6.4; 5N796; CE08873; NM_073899; WBGene00000734; WP:CE08873 WormBase description: collagen
C50B6.4#2 C50B6.4#2 P W
C50D2.1 C50D2.1 P W All gene names: C50D2.1; 2A403; CE27874; WBGene00016805; WP:CE27874
C52G5.2 C52G5.2 P W All gene names: C52G5.2; CE03086; WBGene00008260; WP:CE03086; XN463
C54A12.1 C54A12.1 P W All gene names: ptr-6; C54A12.1; 2F534; CE39341; NM_062585; WBGene00004221; WBGene00016908; WP:CE39341 WormBase description: ptr-6 encodes an ortholog of Drosophila and human PTCHD3, which defines one of seven paralogous families of sterol sensing domain (SSD) proteins; PTR-6 is weakly required for normal molting from L4 to adult stages; however, PTR-6 in conjunction with PTR-1 and PTR-10 is strongly required for both molting and viability, with triple ptr-1/-6/-10 RNAi animals showing pronounced molting defects and lethality; PTR-6 is also required for normal growth to full size and locomotion.
C54C8.2 C54C8.2 P W All gene names: C54C8.2; 1N33; CE08965; WBGene00008290; WP:CE08965
F11G11.10 COL-17, #2, F11G11.10 P W All gene names: col-17; F11G11.10; 2F156; CE31783; NM_062477; WBGene00000606; WP:CE31783 WormBase description: col-17 encodes a collagen which is expressed in all developmental stages except eggs, like col-15, col-16, and col-20; collagen genes with this expression pattern may be used for synthesis of cuticles after the L1 stage (e.g., the L4 cuticle). WormBase CDS description: collagen
ZK1290.3 COL-6, #2, ZK1290.3 P W All gene names: rol-8; ZK1290.3; 2H835; CE29156; CE32085; COL6_CAEEL; NM_063181; NM_182112; WBGene00004398; WP:CE29156; WP:CE32085; col6 WormBase description: rol-8 encodes a collagen that is enriched in dauer larvae; mutations cause adults to become left-handed rollers.
D1005.2 D1005.2 P W All gene names: D1005.2; CE29741; WBGene00016996; WP:CE29741; XC81
D1054.9 D1054.9 P W All gene names: D1054.9; D1054.9b.1; D1054.9b.2; 5L266; CE31897; CE38307; CE38308; CE38309; CE38310; Q9XVV1_CAEEL; WBGene00008376; WP:CE31897; WP:CE38307; WP:CE38308; WP:CE38309; WP:CE38310
D1069.2 D1069.2 P W All gene names: cpn-2; D1069.2; D1069.2.1; D1069.2.2; 2A629; CE38495; NM_061312; WBGene00000778; WP:CE38495 WormBase description: cpn-2 encodes a calponin homolog, more similar to the calponin paralogs transgelin (SM22 alpha) or neuronal protein NP25 than to calponin per se. WormBase CDS description: calponin
D2024.4 D2024.4 P W All gene names: D2024.4; 4H997; CE04293; WBGene00017052; WP:CE04293
F46C8.6 DPY-7, #2, F46C8.6 P W All gene names: dpy-7; F46C8.6; F46C8.6.1; F46C8.6.2; CE04580; DPY7_CAEEL; NM_076873; WBGene00001069; WP:CE04580; XI156 WormBase description: dpy-7 encodes a cuticular collagen; DPY-7 functions as a structural constituent of the extracellular cuticle whose activity is required for normal cuticular morphology and hence, proper body form. WormBase CDS description: cuticle collagen
E01G6.1 E01G6.1 P W All gene names: E01G6.1; CE03112; WBGene00008449; WP:CE03112; XM883 WormBase description: pancreatic trypsin inhibitor (kunitz) protein
EGAP7.1 EGAP7.1 P W All gene names: dpy-12; dpy-3; EGAP007.1; EGAP7.1; CE07013; NM_075994; WBGene00001065; WP:CE07013; XC764 WormBase description: dpy-3 encodes a cuticular collagen; along with dpy-2, dpy-7, dpy-8, and dpy-10, dpy-3 is required postembryonically for annular furrow formation and/or maintenance; specifically, DPY-3 activity is required for proper assembly of the DPY-7 collagen into the mature extracellular matrix; during each cuticle synthetic period, dpy-3 mRNA is expressed approximately four hours prior to the secretion of new cuticle. WormBase CDS description: cuticular collagen
F01D5.6 F01D5.6 P W All gene names: F01D5.6; 2O297; CE18563; WBGene00008496; WP:CE18563
F01G10.10 F01G10.10 P W All gene names: F01G10.10; 4L13; CE36123; Jul 19 07 JL WBGene00008512; WP:CE36123 WormBase description: "Node #28::F01G10.10 Protein with Jul 19 07 JL moderate similarity to H. sapiens Hs.154078/LBP, a lipopolysaccharide binding protein; has strong similarity to C. elegans C55C3.1 ::LG 4(9837823)::F01G10.10::28165"
F02D8.2 F02D8.2 P W All gene names: grd-12; F02D8.2; 5P457; CE09180; NM_074281; WBGene00001701; WP:CE09180 WormBase description: grd-12 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central low-complexity proline-rich domain, and a C-terminal Ground domain; GRD-12 is expressed in intestine, rectal epithelium, undefined head and tail cells, vulva, and hypodermis; the Ground domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins; GRD-12 is required for normal growth to full size, locomotion, and vulval morphogenesis; all of these requirements may reflect common defects in cholesterol-dependent hedgehog-like signalling or in vesicle trafficking.
F07H5.8 F07H5.8#2 P W
F08F1.6 F08F1.6 P W All gene names: spp-13; F08F1.6; CE09253; NM_077027; WBGene00004998; WP:CE09253; XJ36 WormBase description: 7TM chemoreceptor, spp family
F09B12.1 F09B12.1 P W All gene names: mlt-9; F09B12.1; F09B12.1b.1; F09B12.1b.2; CE23633; CE23634; WBGene00008605; WP:CE23633; WP:CE23634; XP722
F09E8.6 F09E8.6#2 P W
F09F9.2 F09F9.2 P W All gene names: F09F9.2; CE04347; WBGene00017307; WP:CE04347; XE728
F09G8.6 F09G8.6 P W All gene names: col-91; F09G8.6; 3J348; CE00141; COL91_CAEEL; NM_066413; WBGene00000666; WP:CE00141 WormBase description: Cuticle collagen
F10D11.6 F10D11.6 P W All gene names: F10D11.6; 1J22; CE23640; Jul 19 07 JL WBGene00008652; WP:CE23640 WormBase description: Node #33::F10D11.6 Protein with Jul 19 07 JL weak similarity to H. sapiens BPI (bactericidal/permeability-increasing protein) ::LG 1(7778221)::F10D11.6::24154
F10F2.3 F10F2.3#2 P W
F11G11.10 COL-17, #2, F11G11.10 P W All gene names: col-17; F11G11.10; 2F156; CE31783; NM_062477; WBGene00000606; WP:CE31783 WormBase description: col-17 encodes a collagen which is expressed in all developmental stages except eggs, like col-15, col-16, and col-20; collagen genes with this expression pattern may be used for synthesis of cuticles after the L1 stage (e.g., the L4 cuticle). WormBase CDS description: collagen
F11G11.12 F11G11.12 P W All gene names: col-73; F11G11.12; 2F162; CE09354; NM_062479; WBGene00000649; WP:CE09354 WormBase description: collagen
F12F6.9 F12F6.9 P W All gene names: col-128; F12F6.9; 4M316; CE05597; NM_069774; WBGene00000702; WP:CE05597 WormBase description: collagen
F13D11.4 F13D11.4 P W All gene names: F13D11.4; CE37632; WBGene00017429; WP:CE37632; XG452 WormBase description: dihydroflavonol-4-reductase (maize, petunia, tomato)
F15B9.1 F15B9.1 P W All gene names: far-3; F15B9.1; 5N476; CE09406; NM_073850; WBGene00001387; WP:CE09406 WormBase description: O.volvulus antigen peptide like
F15B9.8 F15B9.8 P W All gene names: F15B9.8; 5N471; CE20686; WBGene00008851; WP:CE20686 WormBase description: Thrombospondin type 1 domain
F15E6.2 F15E6.2 P W All gene names: F15E6.2; 4F67; CE36293; WBGene00017483; WP:CE36293
F17C11.3 F17C11.3 P W All gene names: col-153; F17C11.3; 5L431; CE05650; NM_073392; WBGene00000726; WP:CE05650 WormBase description: collagen
F18C5.5 F18C5.5 P W All gene names: F18C5.5; 2G856; CE02654; WBGene00017560; WP:CE02654
F19G12.7 F19G12.7#2 P W
F19H8.4 F19H8.4 P W All gene names: F19H8.4; 2O907; CE32632; WBGene00008964; WP:CE32632
F20G2.3 F20G2.3 P W All gene names: F20G2.3; 5O246; CE09506; WBGene00008987; WP:CE09506
F22F4.1 F22F4.1 P W All gene names: F22F4.1; CE07126; WBGene00017716; WP:CE07126; XG625
F23H12.4 F23H12.4#2 P W
F25D1.3 F25D1.3 P W All gene names: F25D1.3; 5L9; CE31917; WBGene00009108; WP:CE31917
F25E5.2 F25E5.2 P W All gene names: F25E5.2; 5H935; CE07136; WBGene00017783; WP:CE07136
F25H8.6 F25H8.6#2 P W
F26A1.9 F26A1.9 P W All gene names: F26A1.9; 3F910; CE29287; WBGene00017807; WP:CE29287
F26G1.5 F26G1.5 P W All gene names: F26G1.5; 2F60; CE02697; WBGene00017841; WP:CE02697
F27C1.8 F27C1.8 P W All gene names: dpy-5; F27C1.8; F27C1.8.1; F27C1.8.2; 1G0; CE09720; DPY5_CAEEL; NM_059194; WBGene00001067; WP:CE09720 WormBase description: dpy-5 encodes a Group I cuticle procollagen; dpy-5 activity is required for wild-type body length, cuticle structure (width of the annuli), postembryonic growth rates, and reproduction; dpy-5 is described as an intermediate collagen gene, as its mRNA, which is present in all larval stages, adults, and dauer larvae, increases in abudance two hours prior to the secretion of each new cuticle; a dpy-5::gfp fusion gene is expressed in hypodermal cells from mid-to-late L1 larval stages to adulthood, with notably variable expression in the V lineage-derived seam cells; dpy-5 mutations suppress mutations in bli-4, which encodes a proprotein convertase that may process DPY-5 for normal cuticle production; in addition, dpy-5 is required for normal expression patterns of the COL-19, DPY-7, and DPY-13 cuticle collagens. WormBase CDS description: cuticular collagen
F27D9.6 F27D9.6 P W All gene names: dhs-29; F27D9.6; CE28011; NM_076893; Jul 19 07 JL WBGene00000992; WP:CE28011; XI282 WormBase description: Node #26::F27D9.6 Protein with Jul 19 07 JL weak similarity to H. sapiens SDR1 (short-chain dehydrogenase/reductase 1) ::LG X(7401196)::F27D9.6::28332
F27E5.4 F27E5.4 P W All gene names: phas-1; phg-1; F27E5.4; 2K425; CE30964; GAS1_CAEEL; NM_063785; WBGene00004017; WP:CE30964 WormBase description: growth arrest protein extracellular domain
F28D1.9 F28D1.9 P W All gene names: F28D1.9; 4N158; CE39728; CEFATPA; Jul 19 07 JL WBGene00009218; WP:CE39728 WormBase description: Node #29::ceFATPa/F28D1.9 Fatty Jul 19 07 JL acid transport protein ::LG 4(12188189)::F28D1.9::21830
F29B9.9 F29B9.9 P W All gene names: col-111; F29B9.9; 4F420; CE34831; NM_068206; WBGene00000685; WP:CE34831 WormBase description: collagen
F29C12.1 F29C12.1 P W All gene names: pqn-32; F29C12.1; F29C12.1a.1; F29C12.1a.2; 2N399; CE19820; CE37902; Q9XV50_CAEEL; WBGene00004120; WP:CE19820; WP:CE37902 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
F30A10.2 F30A10.2 P W All gene names: F30A10.2; 1K56; CE39360; WBGene00009261; WP:CE39360
F30B5.1 F30B5.1 P W All gene names: dpy-13; dpy-16; F30B5.1; 4F1; CE04462; Jul 19 07 JL DPY13_CAEEL; NM_068118; WBGene00001074; WP:CE04462 WormBase description: "Node #30::dpy-16/dpy-13/F30B5.1 Jul 19 07 JL Collagen; member of the collagen triple helix repeat (20 copies) family ::LG 4(4156984)::F30B5.1::24571" WormBase CDS description: cuticular collagen
F30H5.3 F30H5.3 P W All gene names: F30H5.3; 3B124; CE01927; Q09983_CAEEL; WBGene00017937; WP:CE01927 WormBase description: Serine protease inhibitor
F31F6.5 F31F6.5 P W All gene names: daf-6; ptr-7; F31F6.5; CE38955; NM_078071; WBGene00000902; WP:CE38955; XP511 WormBase description: daf-6 is required for an unidentified function of the nonneuronal amphidial sheath cells that promotes correct morphology of both the amphid and the outer labial sensilla; daf-6 mutants disrupt the joining of the amphid sheath and socket cells to form the receptor channel, and display defects in several distinct functions including formation of dauer larvae, chemotaxis, osmotic avoidance, male mating, negative regulation of lifespan, negative regulation of ASJ's axonal growth late in development, and dye uptake by amphids and phasmids; daf-6 has recently been reported to be identical to the coding sequence ptr-7/F31F6.5, but this assertion has not yet been verified by transgenic rescue.
F32D8.7 F32D8.7 P W All gene names: F32D8.7; 5L379; CE05786; WBGene00009331; WP:CE05786 WormBase description: Kunitz/Bovine pancreatic trypsin inhibitor domain
F32E10.3 F32E10.3 P W All gene names: F32E10.3; 4I337; CE37227; WBGene00017991; WP:CE37227; YF32E_CAEEL WormBase description: LDL-receptor ligand-binding repeat
F33D11.3 F33D11.3 P W All gene names: col-54; F33D11.3; 1G421; CE09893; NM_059293; WBGene00000631; WP:CE09893 WormBase description: collagen
F33H2.8 F33H2.8 P W All gene names: F33H2.8; 1P622; CE37514; WBGene00009371; WP:CE37514
F35D2.1 F35D2.1 P W All gene names: F35D2.1; 2H865; CE02723; WBGene00018039; WP:CE02723
F35G2.5 F35G2.5 P W All gene names: F35G2.5; 4M987; CE35524; WBGene00009438; WP:CE35524
F36A4.10 F36A4.10 P W All gene names: alpha-collagen; col-34; ram-4; Jul 19 07 JL F36A4.10; 4F8; CE07185; COL34_CAEEL; NM_068119; WBGene00000611; WP:CE07185 WormBase description: Node Jul 19 07 JL #30::col-34/alpha-collagen/F36A4.10 Collagen ::LG 4(4164939)::F36A4.10::24699 WormBase CDS description: cuticular collagen
F37C4.4 F37C4.4 P W All gene names: F37C4.4; F37C4.4b.1; F37C4.4b.2; 4E635; CE17047; CE31505; WBGene00018144; WP:CE17047; WP:CE31505
F38A3.2 F38A3.2 P W All gene names: col-82; ram-2; ram-3; F38A3.2; 2L306; CE02214; NM_063961; WBGene00004300; WP:CE02214 WormBase description: ram-2 encodes a cuticle collagen that interacts with unc-6 to affect ray cell migration, and interacts with unc-5 and unc-6 to affect embryonic viability; also affects ray morphology in males such that the structural cells and the hypodermis of the rays are swollen in mutants. WormBase CDS description: collagen
F39D8.3 F39D8.3 P W All gene names: F39D8.3; CE34014; WBGene00009561; WP:CE34014; XQ43 WormBase description: carbonic anhydrase like
F40A3.3 F40A3.3, F40A3.3#2 P W All gene names: F40A3.3; F40A3.3b.1; F40A3.3b.2; 5I359; CE10146; CE38516; PEBPH_CAEEL; WBGene00018218; WP:CE10146; WP:CE38516 WormBase description: phosphatidylethanolamine binding protein
F40A3.3 F40A3.3, F40A3.3#2 P W All gene names: F40A3.3; F40A3.3b.1; F40A3.3b.2; 5I359; CE10146; CE38516; PEBPH_CAEEL; WBGene00018218; WP:CE10146; WP:CE38516 WormBase description: phosphatidylethanolamine binding protein
F41A4.1 F41A4.1 P W All gene names: F41A4.1; 4B441; CE37517; WBGene00018256; WP:CE37517
F41C6.5 F41C6.5 P W All gene names: col-173; F41C6.5; CE04542; NM_076761; WBGene00000746; WP:CE04542; XH494 WormBase description: cuticular collagen
F41E6.14 F41E6.14 P W All gene names: F41E6.14; 5J112; CE10270; WBGene00018295; WP:CE10270
F42A6.8 F42A6.8 P W All gene names: fbxa-130; F42A6.8; 4E104; CE17060; WBGene00018329; WP:CE17060
F44E2.4 F44E2.4#2 P W
F45E4.7 F45E4.7 P W All gene names: F45E4.7; 4I400; CE33648; CE37644; CE37645; WBGene00018472; WP:CE33648; WP:CE37644; WP:CE37645
F46C8.1 F46C8.1 P W All gene names: F46C8.1; CE04576; WBGene00018484; WP:CE04576; XI169
F46C8.6 DPY-7, #2, F46C8.6 P W All gene names: dpy-7; F46C8.6; F46C8.6.1; F46C8.6.2; Jul 19 07 JL CE04580; DPY7_CAEEL; NM_076873; WBGene00001069; WP:CE04580; XI156 WormBase description: "Node #24::dpy-7/F46C8.6 Cuticle Jul 19 07 JL collagen; member of the collagen triple helix repeat (20 copies) family ::LG X(7275858)::F46C8.6::27208" WormBase CDS description: cuticle collagen
F46C8.8 F46C8.8 P W All gene names: F46C8.8; CE35539; WBGene00018487; WP:CE35539; XI170
F46G11.2 F46G11.2 P W All gene names: F46G11.2; CE38520; WBGene00018515; WP:CE38520; XG405
F46H5.3 F46H5.3 P W All gene names: F46H5.3; F46H5.3b.1; F46H5.3b.2; F46H5.3b.3; CE33098; CE37112; KARG1_CAEEL; WBGene00018519; WP:CE33098; WP:CE37112; XH850 WormBase description: arginine kinase
F47B10.7 F47B10.7 P W All gene names: acbp-3; F47B10.7; F47B10.7.1; F47B10.7.2; ACBP3_CAEEL; CE32423; NM_077421; WBGene00009818; WP:CE32423; XL523 WormBase description: acyl-CoA-binding protein
F48A11.1 F48A11.1#2 P W
F49E10.2 F49E10.2 P W All gene names: F49E10.2; CE07263; CE29384; WBGene00018640; WP:CE07263; WP:CE29384; XG513
F49E11.2 F49E11.2 P W All gene names: F49E11.2; 4N800; CE35551; WBGene00009889; WP:CE35551 WormBase description: adenosine receptor like protein
F49E8.4 F49E8.4 P W All gene names: cdd-2; F49E8.4; 4I312; CE10792; NM_068820; Q20628_CAEEL; WBGene00000392; WP:CE10792 WormBase description: A functional cytidine deaminase that affects morphology of embryos; it is expressed at all life cycle stages. WormBase CDS description: cytidine deaminase
F49E8.5 F49E8.5 P W All gene names: dif-1; F49E8.5; F49E8.5.1; F49E8.5.2; Jul 19 07 JL 4I316; CE28408; DIF1_CAEEL; NM_068822; WBGene00000996; WP:CE28408 WormBase description: "Node #34::dif-1/F49E8.5 Member Jul 19 07 JL of the mitochondrial carrier protein family involved in embryonic differentiation; putative ortholog of D. melanogaster colt gene product ::LG 4(7186909)::F49E8.5::26494" WormBase CDS description: mitochondrial carrier family
F52B11.3 F52B11.3 P W All gene names: noah-2; phi-55; F52B11.3; F52B11.3.1; F52B11.3.2; 4O859; CE18723; WBGene00009926; WP:CE18723
F52D1.3 F52D1.3 P W All gene names: pqn-40; F52D1.3; CE37115; NM_075703; WBGene00004127; WP:CE37115; XB70 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
F52E4.5 F52E4.5 P W All gene names: F52E4.5; CE07272; WBGene00018702; WP:CE07272; XD704
F52E4.6 F52E4.6 P W All gene names: wrt-2; F52E4.6; CE07273; NM_076128; Jul 19 07 JL WBGene00006948; WP:CE07273; XD712 WormBase description: Node #25::wrt-2/F52E4.6 Protein Jul 19 07 JL of unknown function, member of the hedgehog-like protein family ::LG X(2842513)::F52E4.6::26519
F52F10.2 F52F10.2 P W All gene names: F52F10.2; 5C27; CE29388; WBGene00018706; WP:CE29388
F53B1.4 F53B1.4 P W All gene names: F53B1.4; CE04644; WBGene00018737; WP:CE04644; XC730 WormBase description: thymidine diphosphoglucose 4,6-dehydratase
F55C10.3 F55C10.3 P W All gene names: col-155; F55C10.3; 5L868; CE11182; CO155_CAEEL; NM_073487; WBGene00000728; WP:CE11182 WormBase description: collagen
F55F8.1 F55F8.1 P W All gene names: ptr-10; F55F8.1; F55F8.1.1; F55F8.1.2; 1G233; CE36938; NM_059257; WBGene00004224; WP:CE36938 WormBase description: ptr-10 encodes an ortholog of Drosophila and human PTCHD3, which defines one of seven paralogous families of sterol sensing domain (SSD) proteins; PTR-10 is weakly required for normal molting from L4 to adult stages; however, PTR-10 in conjunction with PTR-1 and PTR-6 is strongly required for both molting and viability, with triple ptr-1/-6/-10 RNAi animals showing pronounced molting defects and lethality.
F56B3.2 F56B3.2#2 P W
F56D2.3 F56D2.3 P W All gene names: F56D2.3; 3G675; CE11230; WBGene00018965; WP:CE11230
F56H1.1 F56H1.1 P W All gene names: che-14; ptd-1; F56H1.1; 1G329; CE28468; NM_059272; WBGene00000493; WP:CE28468 WormBase description: che-14 encodes a protein with a sterol-sensing domain; CHE-14 protein is involved in the exocytotic secretion of lipid-modified proteins at the apical surface of certain epithelial cells.
F57B7.3 F57B7.3, F57B7.3#2 P W All gene names: col-156; F57B7.3; 5L930; CE05991; NM_073501; WBGene00000729; WP:CE05991 WormBase description: collagen
F57B7.3 F57B7.3, F57B7.3#2 P W All gene names: col-156; F57B7.3; 5L930; CE05991; NM_073501; WBGene00000729; WP:CE05991 WormBase description: collagen
F57B9.9 F57B9.9 P W All gene names: pqn-46; F57B9.9; 3I32; CE33114; NM_066114; WBGene00004133; WP:CE33114 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
F57C12.1 F57C12.1 P W All gene names: nas-38; F57C12.1; CE31188; NAS38_CAEEL; NM_075719; WBGene00003554; WP:CE31188; XB181
F57H12.3 F57H12.3 P W All gene names: ora-1; F57H12.3; 4I743; CE17124; NM_068933; WBGene00003879; WP:CE17124
F57H12.6 F57H12.6 P W All gene names: F57H12.6; 4I740; CE32447; WBGene00019021; WP:CE32447
F58A6.4 F58A6.4 P W All gene names: nas-29; F58A6.4; 2F424; CE39943; NAS29_CAEEL; NM_062552; WBGene00003547; WP:CE39943
F58E6.1 F58E6.2 P W
F58F6.1 F58F6.1 P W All gene names: col-104; F58F6.1; 4C118; CE17136; NM_067669; WBGene00000678; WP:CE17136 WormBase description: cuticular collagen
F58G1.5 F58G1.5#2 P W
F58G1.6 F58G1.6 P W All gene names: F58G1.6; 2N233; CE35563; WBGene00010268; WP:CE35563
F58H1.2 F58H1.2 P W All gene names: F58H1.2; 5M409; CE06026; WBGene00010285; WP:CE06026
F59B10.3 F59B10.3 P W All gene names: F59B10.3; 2K803; CE35884; WBGene00010319; WP:CE35884; YSR3_CAEEL WormBase description: cadherin transmembranous domain
F59B10.5 F59B10.5 P W All gene names: F59B10.5; 2K810; CE01594; WBGene00010321; WP:CE01594; YSR5_CAEEL
H03E18.1 H03E18.1 P W All gene names: H03E18.1; CE37653; WBGene00019148; WP:CE37653; XJ131
K07D8.1 H14A12.6 P W
H19M22.3 H19M22.3 P W All gene names: H19M22.3; 3D731; CE26937; CE29414; CE34904; WBGene00019212; WP:CE26937; WP:CE29414; WP:CE34904 WormBase description: protease
H23N18.5 H23N18.5 P W All gene names: H23N18.5; H23N18.A; 5F386; CE20987; Jul 19 07 JL WBGene00019236; WP:CE20987 WormBase description: Node #28:: Protein of unknown Jul 19 07 JL function, has weak similarity to C. elegans Y52B11A.8 ::LG H23N18.5/H23N18.A()::H23N18.5::53234
H42K12.3 H42K12.3 P W All gene names: H42K12.3; H42K12.3.1; H42K12.3.2; CE11614; WBGene00019272; WP:CE11614; XB933
K01A2.5 K01A2.5 P W All gene names: K01A2.5; 2A593; CE19513; WBGene00019280; WP:CE19513
K02E10.4 K02E10.3, K02E10.4, K02E10.4#2 P W All gene names: K02E10.4; CE30083; CE37250; Q21134_CAEEL; WBGene00019318; WP:CE30083; WP:CE37250; XD105
K02E10.4 K02E10.3, K02E10.4, K02E10.4#2 P W All gene names: K02E10.4; CE30083; CE37250; Q21134_CAEEL; WBGene00019318; WP:CE30083; WP:CE37250; XD105
K02E10.4 K02E10.3, K02E10.4, K02E10.4#2 P W All gene names: K02E10.4; CE30083; CE37250; Q21134_CAEEL; WBGene00019318; WP:CE30083; WP:CE37250; XD105
K03H9.2 K03H9.2 P W All gene names: col-75; K03H9.2; 2G717; CE01996; COL75_CAEEL; NM_062893; WBGene00000651; WP:CE01996 WormBase description: collagen alpha chain
K04G2.7 K04G2.7 P W All gene names: K04G2.7; 1I622; CE38203; WBGene00010566; WP:CE38203
K08B12.1 K08B12.1 P W All gene names: K08B12.1; 5G741; CE35337; WBGene00019520; WP:CE35337
K08E7.5 K08E7.5 P W All gene names: K08E7.5; 4N343; CE11924; CE39390; CE39392; CE39747; Q21344_CAEEL; WBGene00010673; WP:CE11924; WP:CE39390; WP:CE39392; WP:CE39747
K10B3.7 K10B3.7 P W All gene names: gpd-3; K10B3.7; K10B3.7.1; K10B3.7.2; Jul 19 07 JL CE07370; G3P3_CAEEL; NM_076133; WBGene00001685; WP:CE07370 WormBase description: Node #34::gpd-3/K10B3.7 Jul 19 07 JL Glyceraldehyde-3-phosphate dehydrogenase ::LG X(2862199)::K10B3.7::26286
K10B3.8 K10B3.8 P W All gene names: gpd-2; K10B3.8; CE07371; G3P2_CAEEL; Jul 19 07 JL NM_076134; WBGene00001684; WP:CE07371; XD732 WormBase description: Node #34::gpd-2/K10B3.8 Jul 19 07 JL Glyceraldehyde-3-phosphate dehydrogenase ::LG X(2863566)::K10B3.8::26287
M02G9.2 M02G9.2 P W All gene names: M02G9.2; 2K611; CE37923; WBGene00010831; WP:CE37923
M03B6.3 M03B6.3 P W All gene names: M03B6.3; CE23873; WBGene00010835; WP:CE23873; XO480
M03F4.6 M03F4.5 P W
M03F8.1 M03F8.1 P W All gene names: M03F8.1; 5G433; CE12372; WBGene00019761; WP:CE12372
M153.1 M153.1 P W All gene names: M153.1; CE03511; WBGene00010924; WP:CE03511; XM767 WormBase description: pyrroline-5-carboxylate reductase
M195.1 M195.1 P W All gene names: col-77; M195.1; 2I648; CE03514; NM_063358; WBGene00000653; WP:CE03514 WormBase description: cuticle collagen
M195.2 M195.2 P W All gene names: M195.2; 2I653; CE34950; WBGene00010948; WP:CE34950
R01E6.2 R01E6.2 P W All gene names: R01E6.2; CE35593; WBGene00010968; WP:CE35593; XO180
R02F11.1 R02F11.1 P W All gene names: R02F11.1; 5F281; CE12496; O16364_CAEEL; WBGene00019839; WP:CE12496
R03H4.6 R03H4.6 P W All gene names: R03H4.6; 5J502; CE07409; WBGene00019852; WP:CE07409
R05G6.9 R05G6.9 P W All gene names: R05G6.9; 4I278; CE35359; WBGene00019901; WP:CE35359
R05H10.6 R05H10.6 P W All gene names: cdh-7; R05H10.6; 2P135; CE38092; NM_064674; WBGene00000399; WP:CE38092 WormBase description: cdh-7 encodes a protein that contains a cadherin domain. WormBase CDS description: Cadherin (3 domains)
R06F6.9 R06F6.9 P W All gene names: acbp-2; ech-4; R06F6.9; 2L111; CE01625; NM_063929; WBGene00001153; WP:CE01625 WormBase description: enoyl CoA hydratase/isomerase
R07B1.4 R07B1.4 P W All gene names: gst-36; R07B1.4; CE30562; GST36_CAEEL; NM_077251; WBGene00001784; WP:CE30562; XK480 WormBase description: glutathione S-transferase
R07E3.6 R07E3.6 P W All gene names: R07E3.6; CE02300; WBGene00011107; WP:CE02300; XK939
R07G3.6 R07G3.6 P W All gene names: R07G3.6; 2H894; CE02025; WBGene00019942; WP:CE02025; YRO6_CAEEL
R09A8.4 R09A8.4 P W All gene names: col-182; R09A8.4; CE03540; NM_077709; WBGene00000755; WP:CE03540; XN254 WormBase description: cuticle collagen
R09B5.5 R09B5.5 P W All gene names: pqn-54; R09B5.5; 5B943; CE12626; NM_071022; O44606_CAEEL; WBGene00004139; WP:CE12626 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
R11A5.7 R11A5.7 P W All gene names: R11A5.7; R11A5.7.1; R11A5.7.2; 1I448; CE32478; WBGene00011235; WP:CE32478 WormBase description: zinc carboxypeptidase
R12A1.4 R12A1.4#2 P W
R12E2.14 R12E2.14 P W All gene names: R12E2.14; 1E719; CE18146; WBGene00020039; WP:CE18146
R12E2.15 R12E2.15 P W All gene names: R12E2.15; 1E716; CE18147; WBGene00020040; WP:CE18147
R74.2 R74.2 P W All gene names: R74.2; 3F279; CE23931; WBGene00011278; WP:CE23931
T01B10.2 T01B10.2 P W All gene names: grd-14; T01B10.2; CE07456; NM_077040; Jul 19 07 JL WBGene00001703; WP:CE07456; XJ117 WormBase description: Node #28::grd-14/T01B10.2 Protein Jul 19 07 JL of unknown function, has strong similarity to C. elegans GRD-3 ::LG X(8238828)::T01B10.2::27316
T01B7.7 T01B7.7 P W All gene names: rol-6; T01B7.7; 2J23; CE03591; Jul 19 07 JL NM_063457; ROL6_CAEEL; WBGene00004397; WP:CE03591 WormBase description: Node #29::rol-6/T01B7.7 Member of Jul 19 07 JL the collagen triple helix repeat (20 Copies) protein family ::LG 2(8724526)::T01B7.7::21388 WormBase CDS description: cuticle collagen ROL-6
T01D1.3 T01D1.3 P W All gene names: T01D1.3; 2A464; CE12946; WBGene00020148; WP:CE12946
T02E9.2 T02E9.2, T02E9.2#2 P W All gene names: grl-7; T02E9.2; T02E9.2a.1; T02E9.2a.2; 5L826; CE13064; CE38539; NM_073481; O18015_CAEEL; WBGene00001716; WP:CE13064; WP:CE38539 WormBase description: grl-7 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-7 is expressed in intestine, hypodermis, and seam cells; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
T02E9.2 T02E9.2, T02E9.2#2 P W All gene names: grl-7; T02E9.2; T02E9.2a.1; T02E9.2a.2; 5L826; CE13064; CE38539; NM_073481; O18015_CAEEL; WBGene00001716; WP:CE13064; WP:CE38539 WormBase description: grl-7 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-7 is expressed in intestine, hypodermis, and seam cells; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
T04G9.2 T04G9.2 P W All gene names: nas-15; T04G9.2; CE38541; NAS15_CAEEL; NM_075753; WBGene00003534; WP:CE38541; XB397 WormBase description: zinc metalloprotease
T05C1.3 T05C1.3 P W All gene names: T05C1.3; 2E776; CE02861; WBGene00020250; WP:CE02861
T05C12.10 T05C12.10 P W All gene names: qua-1; T05C12.10; 2I493; CE34989; M110; Jul 19 07 JL NM_063324; WBGene00004264; WP:CE34989 WormBase description: Node #25::M110/T05C12.10 Protein Jul 19 07 JL containing a C-terminal Hint (hedgehog/intein) domain, has similarity to hedgehog proteins and to D. melanogaster VKG, collagen type IV ::LG 2(8190279)::T05C12.10::22239 WormBase CDS description: hedgehog-like protein
T05E7.2 T05E7.2 P W All gene names: col-55; T05E7.2; 1G773; CE13233; NM_059385; WBGene00000632; WP:CE13233
T06A4.3 T06A4.3 P W All gene names: T06A4.3; 1B243; CE37044; CE37045; WBGene00020283; WP:CE37044; WP:CE37045 WormBase description: carboxypeptidase
T06D8.10 T06D8.10#2 P W
T06E4.8 T06E4.8 P W All gene names: T06E4.8; 5K102; CE23951; WBGene00011535; WP:CE23951
T06G6.6 T06G6.6 P W All gene names: T06G6.6; 1N307; CE37143; WBGene00011548; WP:CE37143
T07G12.3 T07G12.3 P W All gene names: T07G12.3; 4L297; CE13391; WBGene00011594; WP:CE13391
T07H8.6 T07H8.6 P W All gene names: ptr-15; T07H8.6; 5H444; CE18227; NM_072359; WBGene00004229; WP:CE18227 WormBase description: ptr-15 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome); PTR-15 has no known function in vivo.
T08H10.2 T08H10.2 P W All gene names: str-35; T08H10.2; 5E953; NR_000514; WBGene00006101
T09F5.1 T09F5.1 P W All gene names: T09F5.1; 5P629; CE13521; WBGene00011665; WP:CE13521
T10B10.1 T10B10.1 P W All gene names: col-41; T10B10.1; CE06399; NM_078121; WBGene00000618; WP:CE06399; XP794 WormBase description: collagen
T13B5.5 T13B5.5 P W All gene names: T13B5.5; 2B398; CE13611; WBGene00020472; WP:CE13611
T13C5.3 T13C5.3 P W All gene names: T13C5.3; CE35768; WBGene00020484; WP:CE35768; XG797
T13H5.3 T13H5.3 P W All gene names: T13H5.3; 2I813; CE36953; WBGene00011757; WP:CE36953 WormBase description: chitinase-like repeats
T14B4.6 T14B4.6 P W All gene names: dpy-2; rol-2; T14B4.6; 2H5; CE04953; Jul 19 07 JL DPY2_CAEEL; NM_062966; WBGene00001064; WP:CE04953 WormBase description: Node #24::dpy-2/rol-2/T14B4.6 Jul 19 07 JL Collagen of the collagen triple helix repeat (20 copies) family ::LG 2(6704082)::T14B4.6::25491
T14B4.7 T14B4.7 P W All gene names: dpy-10; rol-7; T14B4.7; T14B4.7a.1; Jul 19 07 JL T14B4.7a.2; T14B4.7a.3; T14B4.7b.1; T14B4.7b.2; 2H0; CE26000; CE33695; DPY10_CAEEL; NM_062965; NM_182248; WBGene00001072; WP:CE26000; WP:CE33695 WormBase description: Node #24::dpy-10/rol-7/T14B4.7 Jul 19 07 JL Collagen similar to DPY-2 collagen ::LG 2(6700356)::T14B4.7::29266
T14G10.1 T14G10.1#2 P W
T16G1.2 T16G1.2 P W All gene names: T16G1.2; 5N411; CE20072; WBGene00011796; WP:CE20072
T17H7.1 T17H7.1#2 P W
T18D3.3 T18D3.3 P W All gene names: T18D3.3; CE03664; WBGene00011821; WP:CE03664; XN84 WormBase description: cobalt uptake like protein
T19A5.3 T19A5.3 P W All gene names: T19A5.3; 5J420; CE35773; CE37678; WBGene00020554; WP:CE35773; WP:CE37678
T19B10.2 T19B10.2 P W All gene names: phi-59; T19B10.2; T19B10.2.1; T19B10.2.2; 5L703; CE16413; WBGene00011831; WP:CE16413
T19C3.3 T19C3.3 P W All gene names: T19C3.3; 3B228; CE30183; WBGene00020561; WP:CE30183; YSV3_CAEEL
T19D7.2 T19D7.2 P W All gene names: T19D7.2; CE07518; WBGene00020570; WP:CE07518; XB277
T19D7.3 T19D7.3 P W All gene names: T19D7.3; CE07519; WBGene00020571; WP:CE07519; XB275
T21C9.9 T21C9.9 P W All gene names: T21C9.9; 5L72; CE35020; WBGene00011895; WP:CE35020
T21D12.2 T21D12.2 P W All gene names: col-100; dpy-9; T21D12.2; 4B12; CE35021; NM_067488; WBGene00001071; WP:CE35021 WormBase description: dpy-9 encodes a cuticular collagen family member with similarity to human collagen alpha 5, type IV, and affects body length. WormBase CDS description: cuticular collagen
T21H3.2 T21H3.2 P W All gene names: ptr-16; T21H3.2; 5B651; CE13900; NM_070987; WBGene00004230; WP:CE13900 WormBase description: ptr-16 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome); PTR-16 is partially required for normal molting from L2 to L3 larval stages; however, PTR-16 and PTR-1 together are strongly required for both molting and viability, with double ptr-1/-16 RNAi animals showing pronounced molting defects and lethality; PTR-16 is also required for normal growth to full size and locomotion.
T21H8.5 T21H8.5 P W All gene names: T21H8.5; CE18956; WBGene00011905; WP:CE18956
T22B11.2 T22B11.2 P W All gene names: T22B11.2; 4F453; CE17241; WBGene00020676; WP:CE17241
T23F2.1 T23F2.1 P W All gene names: phi-42; tag-249; T23F2.1; T23F2.1.1; T23F2.1.2; CE28488; WBGene00020734; WP:CE28488; XG113 WormBase description: glycosyltransferase
T23F6.1 T23F6.1 P W All gene names: T23F6.1; 4N485; CE18960; WBGene00011949; WP:CE18960
T26C5.2 T26C5.2 P W All gene names: T26C5.2; 2J525; CE35032; WBGene00012032; WP:CE35032
T27A10.6 T27A10.6 P W All gene names: T27A10.6; T27A10.6.1; T27A10.6.2; CE30193; WBGene00020846; WP:CE30193; XE208
VF13D12L.3 VF13D12L.3 P W All gene names: VF13D12L.3; VF13D12L.C; 2M3; CE21229; Jul 19 07 JL WBGene00012149; WP:CE21229 WormBase description: Node #34:: Protein of unknown Jul 19 07 JL function, has strong similarity to C. elegans F36A2.3 ::LG VF13D12L.3/VF13D12L.C()::VF13D12L.3::50188
W01F3.3 W01F3.3 P W All gene names: mlt-11; phi-36; W01F3.3; 5V147; CE16531; WBGene00012186; WP:CE16531 WormBase description: Kunitz/Bovine pancreatic trypsin inhibitor domain (10 domains), Thyroglobulin type-1 repeat
W04G3.1 W04G3.1 P W All gene names: W04G3.1; CE03785; WBGene00012255; WP:CE03785; XL679
W04G3.2 W04G3.2 P W All gene names: W04G3.2; CE03786; WBGene00012256; WP:CE03786; XL681
W04G3.3 W04G3.3 P W All gene names: W04G3.3; CE31627; WBGene00012257; WP:CE31627; XL685
W04G3.8 W04G3.8 P W All gene names: W04G3.8; W04G3.8.1; W04G3.8.2; CE19004; WBGene00012261; WP:CE19004; XL677
W08E12.A W08E12.A P W
W08E12.3 W08E12.I P W
W08E12.2 W08E12.J P W
Y105C5A.5 Y105C5A.D P W
B0399.2 Y116F11A.QQ P W
Y18H1A.9 Y18H1A_67.J P W
Y18H1A_67.K Y18H1A_67.K P W
Y34B4A.10 Y34B4A.C P W
Y37A1B.7 Y37A1B.7 P W All gene names: Y37A1B.7; 4O808; CE19077; WBGene00012540; WP:CE19077
Y37D8A.3 Y37D8A.3 P W All gene names: Y37D8A.3; 3N927; CE20208; WBGene00012545; WP:CE20208
Y38A10A.2 Y38A10A.2 P W All gene names: Y38A10A.2; Y38A10A.E; 5G538; CE21559; Jul 19 07 JL WBGene00021389; WP:CE21559 WormBase description: Node #32:: Protein of unknown Jul 19 07 JL function, has weak similarity to C. elegans T23E1.1 ::LG Y38A10A.2/Y38A10A.E()::Y38A10A.2::49483
Y38C1BA.3 Y38C1BA.G P W
Y38F1A.3 Y38F1A.3 P W All gene names: ptr-18; Y38F1A.3; 2N267; CE36233; NM_064360; WBGene00004232; WP:CE36233 WormBase description: ptr-18 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome); PTR-18 is strongly required for normal molting from L3 to adult stage (a role conserved in C. briggsae); PTR-18 is also required for male tail development and vulval morphogenesis, and (partly) for endocytosis of yolk by oocytes.
Y38F1A.6 Y38F1A.6 P W All gene names: Y38F1A.6; Y38F1A.6.1; Y38F1A.6.2; Y38F1A.6.3; 2N286; CE24222; WBGene00012608; WP:CE24222 WormBase description: Iron-containing alcohol dehydrogenases
Y38H8A.1 Y38H8A.1 P W All gene names: Y38H8A.1; 4O249; CE19118; WBGene00012635; WP:CE19118
Y41E3.2 Y41E3.2, Y41E3.2#2 P W All gene names: col-134; dpy-4; Y41E3.2; 4P750; CE18370; NM_070407; WBGene00001066; WP:CE18370 WormBase description: dpy-4 encodes a cuticle collagen; dpy-4 activity is required for normal body morphology, locomotion, and larval development. WormBase CDS description: CUTICLE COLLAGEN 1
Y41E3.2 Y41E3.2, Y41E3.2#2 P W All gene names: col-134; dpy-4; Y41E3.2; 4P750; CE18370; NM_070407; WBGene00001066; WP:CE18370 WormBase description: dpy-4 encodes a cuticle collagen; dpy-4 activity is required for normal body morphology, locomotion, and larval development. WormBase CDS description: CUTICLE COLLAGEN 1
Y41G9A.5 Y41G9A.B P W
Y43F4A.1 Y43F4A.1 P W All gene names: Y43F4A.1; 3O317; CE16622; CE34227; WBGene00012796; WP:CE16622; WP:CE34227 WormBase description: zinc metallopeptidase (M8 family)
Y43F8B.3 Y43F8B.3 P W All gene names: Y43F8B.3; Y43F8B.J; 5T993; CE21888; WBGene00012814; WP:CE21888 WormBase description: Kunitz/Bovine pancreatic trypsin inhibitor domain
Y46G5A.29 Y46G5.HH P W
Y52B11B.1 Y52B11B.1 P W All gene names: Y52B11B.1; 1L715; CE19220; WBGene00013130; WP:CE19220
Y57E12B.3 Y57E12_246.A P W
Y5H2A.3 Y5H2A.C P W
Y65B4BL.6 Y65B4B_15.A P W
Y71G12A_201.A Y71G12A_201.A P W
Y71G12B.17 Y71G12A_205.C P W
Y75B8A.20 Y75B8A.20 P W All gene names: grl-15; Y75B8A.20; Y75B8A.W; 3N322; CE23031; NM_067191; WBGene00001724; WP:CE23031 WormBase description: grl-15 encodes a hedgehog-like protein, with an N-terminal signal sequence, a central proline-rich low-complexity region, and a C-terminal Ground-like (Grl) domain; GRL-15 is expressed in the reproductive system, vulva, and larval hypodermis; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
Y77E11A.11 Y77E11A_3443.K P W
Y80D3A.5 Y80D3B.D P W
ZC123.1 ZC123.1 P W All gene names: ZC123.1; 1B313; CE28152; WBGene00022517; WP:CE28152
ZC13.4 ZC13.4 P W All gene names: mab-7; ZC13.4; CE14990; NM_075773; WBGene00003104; WP:CE14990; XB510 WormBase description: mab-7 encodes a protein with a hydrophobic type II transmembrane region at the N-terminus, an EGF-like motif, a ShKT motif and a long C-terminus; mab-7 is involved in morphogenesis of the mail tail, specifically affecting the structural cells, neuronal processes and the hypodermal sheath of the sensory rays, as such, it affects mating in males; a mab-7 promoter-gfp construct is expressed in hypodermis, body seam, ray structural cells, and several neurons in the head and tail region.
ZC250.1 ZC250.1 P W All gene names: cyn-17; cyp-17; ZC250.1; 5G285; CE37686; NM_072121; WBGene00000893; WP:CE37686
ZC250.3 ZC250.3 P W All gene names: ZC250.3; 5G274; CE36059; WBGene00022577; WP:CE36059
ZC328.1 ZC328.1 P W All gene names: ZC328.1; ZC328.1.1; ZC328.1.2; 1G981; CE27347; WBGene00022591; WP:CE27347
ZC434.3 ZC434.3 P W All gene names: ZC434.3; 1K910; CE06578; WBGene00013891; WP:CE06578
ZC449.1 ZC449.1 P W All gene names: ZC449.1; CE05051; WBGene00022611; WP:CE05051; XF645
ZC513.1 ZC513.1, ZC513.1#2 P W All gene names: ZC513.1; 5I537; CE07608; Jul 19 07 JL WBGene00022626; WP:CE07608 WormBase description: Node #31::ZC513.1 Protein with Jul 19 07 JL weak similarity to H. sapiens BPI (bactericidal/permeability-increasing protein) ::LG 5(8022119)::ZC513.1::27671
ZC513.1 ZC513.1, ZC513.1#2 P W All gene names: ZC513.1; 5I537; CE07608; WBGene00022626; WP:CE07608
ZK1010.7 ZK1010.7, ZK1010.7#2 P W All gene names: col-97; ZK1010.7; 3O82; CE15507; NM_067299; WBGene00000672; WP:CE15507 WormBase description: collagen
ZK1010.7 ZK1010.7, ZK1010.7#2 P W All gene names: col-97; ZK1010.7; 3O82; CE15507; NM_067299; WBGene00000672; WP:CE15507 WormBase description: collagen
ZK1025.2 ZK1025.2 P W All gene names: ZK1025.2; 1M42; CE19329; WBGene00014182; WP:CE19329
ZK1025.4 ZK1025.4, ZK1025.4#2 P W All gene names: ZK1025.4; 1M48; CE37173; WBGene00014184; WP:CE37173
ZK1025.4 ZK1025.4, ZK1025.4#2 P W All gene names: ZK1025.4; 1M48; CE37173; WBGene00014184; WP:CE37173
ZK1025.5#2 ZK1025.5#2 P W
ZK1025.7 ZK1025.7 P W All gene names: ZK1025.7; 1M59; CE19334; WBGene00014187; WP:CE19334
ZK1025.8 ZK1025.8 P W All gene names: ZK1025.8; 1M63; WBGene00014188
ZK1067.6 ZK1067.6 P W All gene names: sym-2; ZK1067.6; 2J470; CE35148; NM_063559; WBGene00006367; WBGene00014211; WP:CE35148 WormBase description: sym-2 encodes a predicted RNA binding protein that contains three RNA recognition motifs (RRMs) similar to those of Drosophila Fusilli and mammalian hnRNP F and H; genetic analyses indicate that, during embryonic development, sym-2 functions redundantly with mec-8, which also encodes an RRM-containing protein, to affect the structure of body wall muscles or their attachment to the body cuticle, perhaps by regulating maturation of transcripts essential for muscle development. WormBase CDS description: hnRNP F protein like
ZK1067.7 ZK1067.7 P W All gene names: pqn-95; ZK1067.7; 2J516; CE03844; NM_063565; Q23390_CAEEL; WBGene00004174; WP:CE03844 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
ZK1290.12 ZK1290.12 P W All gene names: wrt-1; ZK1290.12; 2H823; CE15545; Jul 19 07 JL NM_063178; WBGene00006947; WP:CE15545; WRT1_CAEEL WormBase description: Node #24::wrt-1/ZK1290.12 Jul 19 07 JL Putative paralog of C. elegans WRT-7, contains similarity to a Hint module (hedgehog/intein) domain ::LG 2(7520955)::ZK1290.12::27361
ZK1290.3 COL-6, #2, ZK1290.3 P W All gene names: rol-8; ZK1290.3; 2H835; CE29156; Jul 19 07 JL CE32085; COL6_CAEEL; NM_063181; NM_182112; WBGene00004398; WP:CE29156; WP:CE32085; col6 WormBase description: Node #32::col-6/ZK1290.3 Collagen Jul 19 07 JL ::LG 2(7533906)::ZK1290.3::27363
ZK1290.8 ZK1290.8 P W All gene names: wrt-10; ZK1290.8; 2H824; CE02087; Jul 19 07 JL NM_063179; WBGene00006956; WP:CE02087 WormBase description: Node #26::wrt-10/ZK1290.8 Protein Jul 19 07 JL of unknown function, has a Wart domain that is found in Warthog-related proteins ::LG 2(7523268)::ZK1290.8::48081
ZK180.6 ZK180.6 P W All gene names: ZK180.6; 4F284; CE07624; WBGene00022680; WP:CE07624
ZK287.4 ZK287.4 P W All gene names: ZK287.4; 5K158; CE06613; WBGene00013965; WP:CE06613 WormBase description: serine protease inhibitor
ZK381.2 ZK381.2, ZK381.2#2 P W All gene names: ZK381.2; 4H731; CE07626; WBGene00022725; WP:CE07626; YPTJ_CAEEL
ZK381.2 ZK381.2, ZK381.2#2 P W All gene names: ZK381.2; 4H731; CE07626; WBGene00022725; WP:CE07626; YPTJ_CAEEL
ZK662.2 ZK662.2 P W All gene names: ZK662.2; CE15377; WBGene00014039; WP:CE15377; XQ315
ZK678.5 ZK678.5 P W All gene names: wrt-4; ZK678.5; ZK678.5.1; ZK678.5.2; Jul 19 07 JL CE24735; NM_078192; WBGene00006950; WP:CE24735; WRT4_CAEEL; XQ372 WormBase description: Node #28::wrt-4/M75/ZK678.5 Jul 19 07 JL Protein with weak similarity to the C-terminus of Drosophila hedgehog ::LG X(15532694)::ZK678.5::50471 WormBase CDS description: Hint module
ZK783.1 ZK783.1 P W All gene names: fbn-1; ZK783.1; 3I729; CE25695; WBGene00022816; WP:CE25695 WormBase description: ZK783.1 is homologous to human fibrillin-1 (FBN1), which when mutated leads to Marfan syndrome (OMIM:154700).
ZK829.3 ZK829.3 P W All gene names: ZK829.3; 4M708; CE27561; WBGene00014094; WP:CE27561
ZK836.1 ZK836.1 P W All gene names: lon-3; ZK836.1; 5M678; CE15415; LON3_CAEEL; WBGene00003057; WP:CE15415 WormBase description: collagen