Gaudet et al 2002, ST3 candidate pharyngeal genes, 240 genes

Gene list file name:Gaudet2002_ST3_240-candidate-pharyngeal-genes
Type of gene identifier:MA primer pair (sjj)
Description:Gaudet et al 2002 Supplement Table3: List of microarray positives. Positives are genes with an average log2(par-1/skn-1)>=2.0;  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

B0238.12 B0238.12 P W All gene names: B0238.12; 5F745; CE07702; O16488_CAEEL; WBGene00015076; WP:CE07702
B0507.1 B0507.1 P W All gene names: B0507.1; 5J259; CE28815; Q22886_CAEEL; WBGene00015218; WP:CE28815
C01B10.5 C01B10.5 P W All gene names: hil-7; C01B10.5; C01B10.5b.1; C01B10.5b.2; H1.Q; 4H411; CE06736; CE26856; CE26857; CE33357; NM_068626; WBGene00001858; WP:CE06736; WP:CE26856; WP:CE26857; WP:CE33357 WormBase description: hil-7 encodes a histone H1.1 isoform that is required in the germline for chromatin silencing (assayed by silencing of transgenic DNA), for proliferation and differentiation, and for fertility; hil-7(RNAi) phenotypes resemble the Mes phenotype resulting from the desilencing of genes required for somatic differentiation in the germline; HIL-7 is required in both the hermaphrodite and the male germlines, and is ubiquitously expressed in all nuclei (somatic and germline).
C02C2.3 C02C2.3 P W All gene names: cup-4; C02C2.3; 3I957; CE30416; CUP4_CAEEL; NM_066309; WBGene00000845; WP:CE30416 WormBase description: The primary phenotype of cup-4 animals is an accumulation of secreted GFP in the pseudocoelom, suggesting a decrease in, or the absence of, endocytosis in coelomocytes. WormBase CDS description: Acetylcholine receptor
C03A3.1 C03A3.1 P W All gene names: C03A3.1; CE31403; CE37310; WBGene00007266; WP:CE31403; WP:CE37310; XL877
C03A7.14 C03A7.14 P W All gene names: abu-8; pqn-4; C03A7.14; 5F672; CE07872; NM_071992; O16511_CAEEL; WBGene00000031; WP:CE07872 WormBase description: abu-8 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-8 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-8 may help protect the organism from damage by improperly folded nascent protein.
C03A7.4 C03A7.4 P W All gene names: pqn-5; C03A7.4; 5F633; CE07862; NM_071981; O16500_CAEEL; WBGene00004099; WP:CE07862 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
C03A7.7 C03A7.7 P W All gene names: abu-6; pqn-6; C03A7.7; 5F636; CE07865; NM_071982; WBGene00000029; WP:CE07865 WormBase description: abu-6 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-6 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-6 may help protect the organism from damage by improperly folded nascent protein.
C03A7.8 C03A7.8 P W All gene names: abu-7; pqn-7; C03A7.8; 5F638; CE07866; NM_071983; O16502_CAEEL; WBGene00000030; WP:CE07866 WormBase description: abu-7 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-7 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-7 may help protect the organism from damage by improperly folded nascent protein.
C04E6.12 C04E6.12 P W All gene names: C04E6.12; 5G400; CE07917; WBGene00015426; WP:CE07917
C04F12.9 C04F12.9 P W All gene names: C04F12.9; 1K286; CE19682; Q9XVE6_CAEEL; WBGene00007303; WP:CE19682
C05E11.8 C05E11.8 P W All gene names: flp-12; C05E11.8; CE03938; NM_076388; WBGene00001455; WP:CE03938; XF210 WormBase description: flp-12 encodes a predicted FMRFamide-like peptide neurotransmitter that affects locomotion when injected into A. suum; expressed in the ASE and PVM sensory neurons.
C06E4.2 C06E4.2 P W All gene names: C06E4.2; 4I39; CE03950; Q17728_CAEEL; WBGene00015531; WP:CE03950
C06G1.2 C06G1.2 P W All gene names: C06G1.2; CE03965; WBGene00015546; WP:CE03965; XR239
C10G8.2 C10G8.2 P W All gene names: C10G8.2; 5F795; CE08073; WBGene00015681; WP:CE08073
C10G8.5 C10G8.5 P W All gene names: ncx-2; C10G8.5; C10G8.5c.1; C10G8.5c.2; 5F787; CE30724; CE30725; CE32582; CE32583; NM_072013; WBGene00003567; WP:CE30724; WP:CE30725; WP:CE32582; WP:CE32583 WormBase description: sodium/calcium exchanger protein 1
C14B9.2 C14B9.2 P W All gene names: C14B9.2; C14B9.2.1; C14B9.2.2; 3J225; CE30601; PDIA4_CAEEL; WBGene00015752; WP:CE30601 WormBase description: erp72
C14C11.8 C14C11.8 P W All gene names: pqn-13; C14C11.8; 5G150; CE36269; NM_072093; WBGene00004104; WP:CE36269 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
C14C6.5 C14C6.5 P W All gene names: C14C6.5; 5B15; CE08160; WBGene00015759; WP:CE08160
C15H9.9 C15H9.9 P W All gene names: C15H9.9; C15H9.9.1; C15H9.9.2; CE04001; Q18032_CAEEL; WBGene00015803; WP:CE04001; XG746
C18A11.1 C18A11.1 P W All gene names: C18A11.1; CE04032; WBGene00015947; WP:CE04032; XI687
C18H9.6 C18H9.6 P W All gene names: C18H9.6; 2G990; CE39324; WBGene00016004; WP:CE39324; YQ86_CAEEL
C23H3.9 C23H3.8, C23H3.9 P W All gene names: C23H3.9; 2A362; CE32136; CE32137; CE35956; CE36980; WBGene00016022; WP:CE32136; WP:CE32137; WP:CE35956; WP:CE36980
C23H3.9 C23H3.8, C23H3.9 P W All gene names: C23H3.9; 2A362; CE32136; CE32137; CE35956; CE36980; WBGene00016022; WP:CE32136; WP:CE32137; WP:CE35956; WP:CE36980
C24A3.2 C24A3.2 P W All gene names: C24A3.2; C24A3.2a.1; C24A3.2a.2; C24A3.2a.3; C24A3.2a.4; C24A3.2a.5; C24A3.2b.1; C24A3.2b.2; CE04059; CE29184; Q18124_CAEEL; WBGene00016033; WP:CE04059; WP:CE29184; XJ617
C25A11.4 C25A11.3 P W
C25D7.10 C25D7.10 P W All gene names: C25D7.10; CE27731; WBGene00007720; WP:CE27731
C27A2.5 C27A2.5 P W All gene names: C27A2.5; 2F356; CE04105; Q18238_CAEEL; WBGene00016153; WP:CE04105
C27C12.6 C27C12.6 P W All gene names: dmd-4; C27C12.6; CE23560; WBGene00007776; WP:CE23560; XP476 WormBase description: doublesex protein like
C30A5.6 C30A5.6 P W All gene names: C30A5.6; 3J296; CE29204; WBGene00016240; WP:CE29204; YK86_CAEEL
C30G12.1 C30G12.1 P W All gene names: C30G12.1; 2H591; CE29685; WBGene00016273; WP:CE29685; YQB1_CAEEL
C32H11.5 C32H11.5 P W All gene names: C32H11.5; 4N688; CE19712; Q9XUH6_CAEEL; WBGene00007868; WP:CE19712
C36H8.2 C36H8.2 P W All gene names: inx-6; opu-6; C36H8.2; 4N513; CE24831; INX6_CAEEL; NM_070034; WBGene00002128; WP:CE24831 WormBase description: inx-6 encodes an innexin, an integral transmembrane channel protein that is a structural component of invertebrate gap junctions; INX-6 is required for formation of pharyngeal gap junctions and thus for the electrical coupling and synchronous muscle contractions necessary for normal feeding behavior and postembryonic development; INX-6 may function redundantly with EAT-5, another C. elegans innexin; INX-6 expression is first detected in embryonic pharyngeal precursors and during later larval and adult stages, in pharyngeal corpus muscles and isthmus marginal cells, where INX-6 localizes to plaque-like structures in the plasma membrane. WormBase CDS description: UNC-7 like
C37H5.13 C37H5.13 P W All gene names: C37H5.13; 5F336; CE27834; CE27835; CE39688; WBGene00016511; WP:CE27834; WP:CE27835; WP:CE39688
C44H4.1 C44H4.1 P W All gene names: C44H4.1; CE35433; WBGene00008093; WP:CE35433; XP193 WormBase description: Leucine Rich Repeat (2 copies) (6 domains)
C45B11.2 C45B11.2 P W All gene names: C45B11.2; 5L525; CE05426; WBGene00008105; WP:CE05426 WormBase description: epoxide hydrolase like
C46H11.9 C46H11.9 P W All gene names: phat-2; C46H11.9; 1F614; CE08791; WBGene00016733; WP:CE08791
C49G7.4 C49G7.4 P W All gene names: phat-3; C49G7.4; 5E523; CE08862; WBGene00016782; WP:CE08862
C50B8.4 C50B8.4 P W All gene names: C50B8.4; 5O53; CE23606; WBGene00008226; WP:CE23606
C53B7.1 C53B7.1 P W All gene names: rig-3; C53B7.1; CE06971; NM_076754; WBGene00004370; WP:CE06971; XH479
C53C11.3 C53C11.3 P W All gene names: ptr-5; C53C11.3; CE34277; NM_078409; WBGene00004220; WP:CE34277; XR939 WormBase description: ptr-5 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome); PTR-5 is weakly required for normal molting from L4 to adult stages; PTR-5 is also required for normal growth to full size and locomotion; PTR-5 is expressed in head and tail neurons, and in ventral nerve cord.
C53C9.2 C53C9.2 P W All gene names: C53C9.2; CE27882; WBGene00016898; WP:CE27882; XI306; YSE2_CAEEL
C54G4.4 C54G4.4 P W All gene names: C54G4.4; 1I574; CE15735; WBGene00008314; WP:CE15735 WormBase description: sushi repeats
C54G7.3 C54G7.3 P W All gene names: lgx-1; pqn-23; C54G7.3; CE29730; CE29731; NM_171689; NM_171690; WBGene00002983; WP:CE29730; WP:CE29731; XG146 WormBase description: lgx-1 encodes a protein with eight EB modules (worm-specific domains, containing eight conserved cysteines that probably form four disulphide bridges, that are of unknown function) and a glutamine/asparagine (Q/N)-rich domain.
C55A6.6 C55A6.6 P W All gene names: C55A6.6; 5L994; CE09003; WBGene00008335; WP:CE09003 WormBase description: alcohol dehydrogenase
CD4.9 CD4.9 P W All gene names: CD4.9; 5G90; CE16957; WBGene00016994; WP:CE16957
D1009.5 D1009.5 P W All gene names: dylt-2; xbx-2; D1009.5; CE04289; NM_077110; WBGene00017014; WP:CE04289; XJ558
D1054.8 D1054.8 P W All gene names: D1054.8; 5L265; CE05526; WBGene00008375; WP:CE05526 WormBase description: dehydrogenase
D1054.9 D1054.9 P W All gene names: D1054.9; D1054.9b.1; D1054.9b.2; 5L266; CE31897; CE38307; CE38308; CE38309; CE38310; Q9XVV1_CAEEL; WBGene00008376; WP:CE31897; WP:CE38307; WP:CE38308; WP:CE38309; WP:CE38310
D2024.4 D2024.4 P W All gene names: D2024.4; 4H997; CE04293; WBGene00017052; WP:CE04293
D2092.6 D2092.6 P W All gene names: D2092.6; 1H171; CE09105; WBGene00017067; WP:CE09105
D2096.6 D2096.6 P W All gene names: MYO2-D; D2096.6; 4J132; CE04304; WBGene00017073; WP:CE04304; YYT6_CAEEL
DY3.5 DY3.5 P W All gene names: pqn-26; DY3.5; 1J348; CE15749; NM_059974; WBGene00004115; WP:CE15749 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
E01G6.1 E01G6.1 P W All gene names: E01G6.1; CE03112; WBGene00008449; WP:CE03112; XM883 WormBase description: pancreatic trypsin inhibitor (kunitz) protein
F07C4.11 F07C4.11 P W All gene names: F07C4.11; 5I120; CE09210; WBGene00017204; WP:CE09210
F07H5.6 F07H5.6 P W All gene names: F07H5.6; 2J82; CE03155; WBGene00008557; WP:CE03155
F08B12.1 F08B12.1 P W All gene names: F08B12.1; CE03162; WBGene00008571; WP:CE03162; XM11 WormBase description: F08B12.1 is orthologous to the human gene AC133-2 ANTIGEN (PROML1; OMIM:604365), which when mutated leads to disease.
F08B12.4 F08B12.4 P W All gene names: F08B12.4; F08B12.4.1; F08B12.4.2; CE26708; WBGene00008572; WP:CE26708; XM26; YZ10_CAEEL
F08B4.2 F08B4.2 P W All gene names: cdh-5; F08B4.2; 4J439; CE07043; CE29253; NM_069085; NM_069086; WBGene00000397; WP:CE07043; WP:CE29253 WormBase description: a homolog of cadherin.
F08G2.5 F08G2.5 P W All gene names: F08G2.5; 2O122; CE19777; Q9XVA3_CAEEL; WBGene00008577; WP:CE19777
F09F3.6 F09F3.6 P W All gene names: F09F3.6; 5O334; CE09289; WBGene00008628; WP:CE09289 WormBase description: Transthyretin-like family
F09F7.8 F09F7.8 P W All gene names: nspb-12; F09F7.8; 3G656; CE38594; Q19279_CAEEL; WBGene00017305; WP:CE38594 WormBase description: nspb family
F10B5.3 F10B5.3 P W All gene names: F10B5.3; F10B5.3.1; F10B5.3.2; 2I438; CE01545; WBGene00008640; WP:CE01545 WormBase description: Zinc finger, C2H2 type
F10F2.9 F10F2.9 P W All gene names: pqn-29; F10F2.9; 3F730; CE00954; NM_065547; WBGene00004118; WP:CE00954 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
F10G8.8 F10G8.8 P W All gene names: F10G8.8; 1K628; CE30751; O62399_CAEEL; WBGene00008666; WP:CE30751 WormBase description: PH (pleckstrin homology) domain (2 domains)
F11D5.1 F11D5.1 P W All gene names: F11D5.1; CE27948; CE27949; CE39915; WBGene00017380; WP:CE27948; WP:CE27949; WP:CE39915; XD965
F11E6.8 F11E6.8 P W All gene names: F11E6.8; 4S388; CE19788; WBGene00008711; WP:CE19788 WormBase description: Eukaryotic protein kinase domain
F12F3.1 F12F3.1 P W All gene names: exp-2; F12F3.1; F12F3.1a.1; F12F3.1a.2; 5G623; CE09359; CE37629; CE37630; CE37631; WBGene00001374; WP:CE09359; WP:CE37629; WP:CE37630; WP:CE37631 WormBase description: exp-2 encodes a member of the six-transmembrane voltage-activated (Kv-type) family of potassium channels; exp-2 is required for normal pharyngeal muscle action potentials and hence, for normal feeding behavior; in addition, exp-2 is required for chemotaxis; when expressed in Xenopus oocytes, EXP-2 displays inward rectifying currents, however when assessed in endogenous pharyngeal tissue, EXP-2 displays hyperpolarization-activated outward currents; an EXP-2 translational reporter fusion is expressed strongly in pharyngeal muscles, amphid, phasmid, and head neurons, posterior enteric muscles, and occasionally faintly in the egg-laying muscles.
F13H10.1 F13H10.1 P W All gene names: F13H10.1; 4L765; CE05622; Q19424_CAEEL; WBGene00008773; WP:CE05622
F13H8.4 F13H8.4 P W All gene names: F13H8.4; 2G551; CE35476; WBGene00017437; WP:CE35476 WormBase description: F13H8.4 encodes a homolog of the human neuronal membrane glycoproteins PLP1 (OMIM:300401, mutated in Pelizaeus-Merzbacher disease and spastic paraplegia), M6A (OMIM:601275), and M6B (300051); the presence of a myelin-related protein in C. elegans is currently unexplained, but suggests that some evolutionary precursor of myelin may exist in invertebrates, perhaps involving septate junctions between cells.
F14B4.1 F14B4.1 P W All gene names: F14B4.1; 1J842; CE38950; WBGene00008779; WP:CE38950 WormBase description: LDL receptor-related protein
F16B4.8 F16B4.8 P W All gene names: cdc-25.2; F16B4.8; 5C63; CE19796; MPIP2_CAEEL; NM_071045; WBGene00000387; WP:CE19796 WormBase description: cdc-25.2 encodes a putative homolog of Cdc25 phosphatase protein family that affects germline proliferation. WormBase CDS description: protein-tyrosine phosphatase
F19C6.4 F19C6.4 P W All gene names: F19C6.4; CE01557; WBGene00008953; WP:CE01557; XK632 WormBase description: F19C6.4 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; F19C6.4 has no clear orthologs in other organisms.
F19G12.3 F19G12.3 P W All gene names: F19G12.3; CE07086; WBGene00017611; WP:CE07086; XC41
F20B10.3 F20B10.3 P W All gene names: F20B10.3; 4M931; CE35499; Q19618_CAEEL; WBGene00008967; WP:CE35499
F21D5.9 F21D5.9 P W All gene names: F21D5.9; 4J485; CE03251; WBGene00009014; WP:CE03251 WormBase description: Zinc finger, C2H2 type
F21D9.5 F21D9.5 P W All gene names: F21D9.5; 5T721; CE18631; WBGene00009019; WP:CE18631
F21H11.3 F21H11.3 P W All gene names: sdf-13; tbx-2; F21H11.3; F21H11.3.1; F21H11.3.2; 3G222; CE01245; NM_065687; TBX2_CAEEL; WBGene00006543; WP:CE01245 WormBase description: tbx-2 encodes one of 21 C. elegans T-box transcription factors; during development, tbx-2 activity is required for normal adaptation, but not chemotaxis, to attractive odorants sensed by the AWC amphid neurons; tbx-2 is also required redundantly with unc-3 and unc-31 for negative regulation of dauer formation, and large-scale RNAi screens reveal an essential role for tbx-2 in early larval development, normal rates of postembryonic growth, and locomotory behavior; antibodies to TBX-2 detect expression in the cytoplasm of amphid and pharyngeal neurons in larvae and adults, suggesting that TBX-2 function may be controlled, in part, by regulation of its subcellular localization; in addition, in situ hybridization studies indicate that tbx-2 mRNA is expressed during mid-embryogenesis; tbx-2 expression in the AWC amphid neurons is sufficient to rescue the olfactory adaptation defects seen in tbx-2 mutant animals.
F22A3.1 F22A3.1 P W All gene names: ets-4; F22A3.1; CE34001; WBGene00017687; WP:CE34001; XH139 WormBase description: DNA binding protein, ETS domain
F25G6.6 F25G6.6 P W All gene names: nrs-2; F25G6.6; 5J29; CE09642; NM_072803; WBGene00003816; WP:CE09642 WormBase description: nrs-2 encodes a predicted asparaginyl-tRNA synthetase (AsnRS), a class II aminoacyl-tRNA synthetase that catalyzes the attachment of asparagine to its cognate tRNA and is thus required for protein biosynthesis; loss of nrs-2 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities. WormBase CDS description: asparagine synthetase
F26A10.2 F26A10.2 P W All gene names: F26A10.2; CE02692; WBGene00017814; WP:CE02692; XI252 WormBase description: F26A10.2 encodes a protein with four zinc-finger domains and a glutamine/asparagine-rich domain, that is required for maintenance of the germline and for locomotion; F26A10.2(RNAi) animals are uncoordinated and have sterile progeny. WormBase CDS description: Zinc finger
F26D10.11 F26D10.11 P W All gene names: F26D10.11; 4S219; CE19811; WBGene00009155; WP:CE19811 WormBase description: F26D10.11 encodes an ortholog of murine TMHS (mutated in hurry-scurry/hscy mice), a predicted tetraspan membrane protein required for stereociliary function and a possible ortholog of human DFNB53; the cysteine mutated in hscy mice is conserved in F26D10.11.
F26E4.12 F26E4.12 P W All gene names: F26E4.12; 1K359; CE09696; GPX1_CAEEL; WBGene00009165; WP:CE09696 WormBase description: glutathione peroxidase
F26F12.4 F26F12.4 P W All gene names: F26F12.4; 5G346; CE07149; WBGene00017835; WP:CE07149
F26G1.6 F26G1.6 P W All gene names: F26G1.6; 2F66; CE37363; WBGene00017842; WP:CE37363 WormBase description: F26G1.6 encodes a neprilysin; neprilysins are thermolysin-like zinc metallopeptidases, found on the outer surface of animal cells, that negatively regulate small signalling peptides (e.g., enkephalin, tachykinin, insulin, and natriuretic peptides) by cleaving them; while F26G1.6 has no clear orthologs in other organisms, it falls into a group of proteins that includes the classical neprilysins found in mammals (e.g., PEX [OMIM:307800] and the enkephalin cleaving enzymes). WormBase CDS description: Neprilysin
F28F5.4 F28F5.4 P W All gene names: F28F5.4; CE00791; WBGene00043297; WP:CE00791
F29F11.5 F29F11.5 P W All gene names: ceh-22; F29F11.5; 5L155; CE05771; HM22_CAEEL; NM_073331; WBGene00000445; WP:CE05771 WormBase description: The ceh-22 gene encodes a NK-2 family homeodomain factor homologous to Drosophila TINMAN and vertebrate Nkx2-5 proteins.
F35A5.3 F35A5.3 P W All gene names: abu-10; pqn-33; F35A5.3; CE04487; NM_076258; Q20002_CAEEL; WBGene00000033; WP:CE04487; XE417 WormBase description: abu-10 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and a cysteine-rich repeat (DUF139); abu-10 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum (ER), and ABU-10 may function within the ER to protect the organism from damage by improperly folded nascent protein.
F35D11.2 F35D11.2 P W All gene names: pqn-35; F35D11.2; F35D11.2a.1; F35D11.2a.2; 2E915; CE31802; CE32647; NM_062416; NM_182111; WBGene00004122; WP:CE31802; WP:CE32647 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
F35E12.5 F35E12.5 P W All gene names: F35E12.5; 5O218; CE38510; WBGene00009429; WP:CE38510
F36D4.3 F36D4.3 P W All gene names: hum-2; F36D4.3; F36D4.3c.1; F36D4.3c.2; 5J879; CE30777; CE33076; CE33077; CE35927; CE35928; NM_073032; Q8MYQ0_CAEEL; WBGene00002036; WP:CE30777; WP:CE33076; WP:CE33077; WP:CE35927; WP:CE35928 WormBase description: hum-2 is orthologous to the human gene MYOSIN HEAVY CHAIN 12 (MYO5A; OMIM:160777), which when mutated leads to disease.
F38A6.1 F38A6.1 P W All gene names: Ce-fkh-1; fkh-1; pha-4; F38A6.1; 5V229; CE15998; NM_075605; Q17381_CAEEL; WBGene00004013; WP:CE15998 WormBase description: Fork head domain, eukaryotic transcription factors
F38B6.1 F38B6.1 P W All gene names: F38B6.1; CE04514; WBGene00018171; WP:CE04514; XH317
F38H4.3 F38H4.3 P W All gene names: F38H4.3; 4M611; CE10062; Q20178_CAEEL; WBGene00009547; WP:CE10062
F39E9.7 F39E9.7 P W All gene names: F39E9.7; 2D596; CE10110; WBGene00018199; WP:CE10110
F40E10.2 F40E10.2 P W All gene names: sox-3; F40E10.2; CE05838; NM_078038; WBGene00004950; WP:CE05838; XP308 WormBase description: sex-determining protein SOX3 like
F40E10.5 F40E10.5 P W All gene names: F40E10.5; CE05840; NM_078040; WBGene00009573; WP:CE05840; XP321
F40F9.10 F40F9.10 P W All gene names: F40F9.10; 5K192; CE05859; WBGene00009586; WP:CE05859
F40H3.4 F40H3.4 P W All gene names: fkh-8; F40H3.4; 2G480; CE19865; NM_062834; WBGene00001440; WP:CE19865 WormBase description: fkh-8 encodes one of 15 C. elegans forkhead transcription factors; loss of fkh-8 activity via RNAi has been reported to result in either no defects or a weakly penetrant aldicarb resistance phenotype; an FKH-8 reporter fusion is expressed in nerve cells in the head and tail ganglia of both males and hermaphrodites with expression beginning in the later stages of embryogenesis and continuing through adulthood.
F40H3.5 F40H3.5 P W All gene names: hst-3; F40H3.5; 2G456; CE19866; NM_062829; WBGene00002030; WP:CE19866 WormBase description: heparan sulfate sulfotransferase
F41G3.10 F41G3.10 P W All gene names: F41G3.10; 2H40; CE31937; Q20289_CAEEL; WBGene00018303; WP:CE31937
F41H10.8 F41H10.8 P W All gene names: elo-6; F41H10.8; 4G152; CE10286; NM_068396; WBGene00001244; WP:CE10286 WormBase description: The elo-6 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; ELO-6 may be required for a normally high growth rate.
F42G2.3 F42G2.3 P W All gene names: F42G2.3; 2C711; CE10310; O17100_CAEEL; WBGene00018352; WP:CE10310
F42G9.9 F42G9.9 P W All gene names: ptl-1; tau-1; F42G9.9; F42G9.9a.1; F42G9.9a.2; F42G9.9b.1; F42G9.9b.2; F42G9.9c.1; F42G9.9c.2; F42G9.9d.1; F42G9.9d.2; 3B387; CE24967; CE28321; CE28322; CE30793; Q95QG4_CAEEL; WBGene00004212; WP:CE24967; WP:CE28321; WP:CE28322; WP:CE30793 WormBase description: ptl-1 encodes a microtubule-binding protein that is homologous to members of the tau/MAP2/MAP4 subfamily of microtubule-associated proteins (OMIM:157140, abnormal aggregates of hyperphosphorylated tau are associated with several neurodegenerative disorders, including Alzheimer's disease, Pick's disease, and corticobasal degeneration); by homology, PTL-1 is predicted to promote microtubule assembly and stability, and to play a role in maintaining neuronal integrity and axonal transport; in vitro, bacterially expressed PTL-1 can bind microtubules; ptl-1 mRNA is expressed at highest levels in the embryo and early larval stages, while PTL-1 is detected in embryonic hypodermis and head neurons and then in the mechanosensory neurons, ALML, ALMR, AVM, PLML, and PLMR, in larvae and adults; as loss of ptl-1 function via mutation or large-scale RNAi screens does not result in any obvious abnormalities, the precise role of PTL-1 in C. elegans development and/or behavior is not yet known.
F43H9.2 F43H9.2 P W All gene names: sptl-2; F43H9.2; 5I501; CE07246; CE27380; WBGene00018398; WP:CE07246; WP:CE27380 WormBase description: serine palmtoyltransferase
F44A2.5 F44A2.5 P W All gene names: F44A2.5; F44A2.5a.1; F44A2.5a.2; 5J781; CE33088; CE33089; Q8MQ52_CAEEL; WBGene00018405; WP:CE33088; WP:CE33089
F45G2.2 F45G2.2 P W All gene names: F45G2.2; F45G2.2b.1; F45G2.2b.2; 3O511; CE28727; CE37971; WBGene00009730; WP:CE28727; WP:CE37971 WormBase description: Myosin head (motor domain) (contains ATP/GTP binding P-loop)
F48E3.8 F46C8.4, F48E3.8 P W All gene names: F48E3.8; CE31173; CE31174; CE31175; WBGene00018607; WP:CE31173; WP:CE31174; WP:CE31175; XI128
F47F6.1 F47F6.2 P W
F48E3.8 F46C8.4, F48E3.8 P W All gene names: F48E3.8; CE31173; CE31174; CE31175; WBGene00018607; WP:CE31173; WP:CE31174; WP:CE31175; XI128
F49D11.8 F49D11.8 P W All gene names: cpn-4; F49D11.8; 1L516; CE17082; NM_060448; WBGene00000780; WP:CE17082 WormBase description: cpn-4 encodes a calponin homolog, most closely related to its paralog CPN-3 in C. elegans; CPN-4 is somewhat more similar to calponins per se (such as CLP1 and CLP2 in humans) than to the to the calponin paralogs transgelin (SM22 alpha) or neuronal protein NP25.
F49E10.2 F49E10.2 P W All gene names: F49E10.2; CE07263; CE29384; WBGene00018640; WP:CE07263; WP:CE29384; XG513
F52B11.5 F52B11.5 P W All gene names: F52B11.5; 4O866; CE18725; WBGene00009927; WP:CE18725
F53A9.3 F53A9.3 P W All gene names: F53A9.3; CE30140; WBGene00018726; WP:CE30140; XJ327
F53B3.3 F53B3.3 P W All gene names: F53B3.3; CE37117; Q20712_CAEEL; WBGene00018742; WP:CE37117; XD488
F53H4.5 F53H4.5 P W All gene names: F53H4.5; CE35554; WBGene00010010; WP:CE35554; XQ501 WormBase description: SAND domain
F54E2.2 F54E2.2 P W All gene names: F54E2.2; R05D8.O; 5D275; CE17106; WBGene00018824; WP:CE17106
F54E2.3 F54E2.3 P W All gene names: ketn-1; pqn-43; F54E2.3; 5D262; CE28729; CE30807; CE30808; CE38607; KETTIN; NM_071357; WBGene00004130; WP:CE28729; WP:CE30807; WP:CE30808; WP:CE38607 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
F54F3.1 F54F3.1 P W All gene names: nid-1; F54F3.1; 5N397; CE18731; NM_073827; WBGene00003738; WP:CE18731 WormBase description: nidogen like
F57B1.6 F57B1.6 P W All gene names: F57B1.6; 5N693; CE11296; WBGene00010189; WP:CE11296
F58E6.7 F58E6.7 P W All gene names: F58E6.7; 5K237; CE38525; WBGene00010256; WP:CE38525
F58G4.1 F58G4.1 P W All gene names: F58G4.1; 5I597; CE07306; WBGene00019064; WP:CE07306 WormBase description: myosin
F59C12.1 F59C12.1 P W All gene names: cdh-9; F59C12.1; CE38081; NM_078284; WBGene00000401; WP:CE38081; XR215 WormBase description: cdh-9 encodes a member of the cadherin superfamily of transmembrane glycoproteins that mediate homophilic cell-cell adhesion; as loss of CDH-9 activity via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of CDH-9 in C. elegans development and/or behavior is not yet known. WormBase CDS description: cadherin-type repeat
H30A04.1 H30A04.1 P W All gene names: crl-1; eat-20; eat-20a; eat-20b; H30A04.1; H30A04.1b.1; H30A04.1b.2; CE18828; CE27767; WBGene00001148; WP:CE18828; WP:CE27767; XQ141 WormBase description: eat-20 encodes a paralog of the C. elegans and Drosophila genes crb-1 and crumbs, expressed in pharynx, head neurons, hypodermis, and developing embryos. WormBase CDS description: EGF-like domain (3 domains)
K01A2.9 K01A2.9 P W All gene names: K01A2.9; 2A606; CE19518; WBGene00019283; WP:CE19518
K01D12.11 K01D12.11 P W All gene names: cdr-4; K01D12.11; 5M886; CE06050; NM_073709; WBGene00010470; WP:CE06050 WormBase description: glutathione S-transferase
K04G11.2 K04G11.2, K04G11.6 P W All gene names: sel-7; K04G11.2; CE35893; NM_077991; WBGene00004764; WP:CE35893; XO950 WormBase description: sel-7 encodes a novel protein with two predicted PEST sequences that is conserved in the related nematode C. briggsae and several parasitic nematodes, but has no known homologs in other organisms; sel-7 was identified in screens for suppressors of dominant lin-12 mutations that result in vulvaless and egg-laying defective animals; although loss of SEL-7 function via mutation or RNAi results in no obvious defects in a wild-type background, genetic studies suggests that SEL-7 acts downstream of LIN-12/Notch to positively regulate LIN-12 signaling, perhaps by regulating the activity or formation of the LAG-1, LIN-12(intra), SEL-8 nuclear complex; in vitro, SEL-7 self-associates and also interacts with TIR-1 (F13B10.1B), a protein that contains sterile alpha and Toll interleukin receptor motifs, and MDT-29 (K08E3.8), a glutamine-rich protein similar to mediator complex subunits, however the functional significance of these interactions is not yet known; a SEL-7::GFP translational fusion reveals expression in the nuclei of several cell types, including vulval precursor cells and those of the developing gonad.
K04G11.2 K04G11.2, K04G11.6 P W All gene names: sel-7; K04G11.2; CE35893; NM_077991; WBGene00004764; WP:CE35893; XO950 WormBase description: sel-7 encodes a novel protein with two predicted PEST sequences that is conserved in the related nematode C. briggsae and several parasitic nematodes, but has no known homologs in other organisms; sel-7 was identified in screens for suppressors of dominant lin-12 mutations that result in vulvaless and egg-laying defective animals; although loss of SEL-7 function via mutation or RNAi results in no obvious defects in a wild-type background, genetic studies suggests that SEL-7 acts downstream of LIN-12/Notch to positively regulate LIN-12 signaling, perhaps by regulating the activity or formation of the LAG-1, LIN-12(intra), SEL-8 nuclear complex; in vitro, SEL-7 self-associates and also interacts with TIR-1 (F13B10.1B), a protein that contains sterile alpha and Toll interleukin receptor motifs, and MDT-29 (K08E3.8), a glutamine-rich protein similar to mediator complex subunits, however the functional significance of these interactions is not yet known; a SEL-7::GFP translational fusion reveals expression in the nuclei of several cell types, including vulval precursor cells and those of the developing gonad.
K06A1.3 K06A1.3 P W All gene names: K06A1.3; 2G733; CE32057; WBGene00019426; WP:CE32057 WormBase description: Cuticulin precursor
K07C11.4 K07C11.4 P W All gene names: K07C11.4; 5I685; CE07347; Q21266_CAEEL; WBGene00019477; WP:CE07347 WormBase description: esterase
K07D4.6 K07D4.6 P W All gene names: K07D4.6; 2E306; CE19530; WBGene00019486; WP:CE19530
K08A8.2 K08A8.2 P W All gene names: sox-2; K08A8.2; K08A8.2a.1; K08A8.2a.2; K08A8.2b.1; K08A8.2b.2; K08A8.2b.3; CE28595; CE31200; NM_171725; NM_171726; WBGene00004949; WP:CE28595; WP:CE31200; XI78 WormBase description: The sox-2 gene encodes a homolog of human SRY, which when mutated leads to gonadal dysgenesis (OMIM:306100).
K08D9.4 K08D9.4 P W All gene names: K08D9.4; 5D676; CE23863; WBGene00019525; WP:CE23863
K08F4.11 K08F4.11 P W All gene names: gst-3; K08F4.11; K08F4.11.1; K08F4.11.2; 4K902; CE25050; CeGST3; GST3_CAEEL; NM_069445; WBGene00001751; WP:CE25050 WormBase description: gst-3 encodes a predicted glutathione S-transferase. WormBase CDS description: glutathione S-transferase
K08F4.7 K08F4.7 P W All gene names: gst-4; K08F4.7; 4K907; CE06155; CeGST1; GST4_CAEEL; NM_069447; WBGene00001752; WP:CE06155 WormBase description: gst-4 encodes a predicted glutathione S-transferase; mRNA is expressed in adults and accumulation increases in response to paraquat. WormBase CDS description: glutathione S-transferase
K08F8.2 K08F8.2 P W All gene names: atf-2; K08F8.2; 2J43; CE03468; NM_063460; Q21361_CAEEL; WBGene00000220; WP:CE03468 WormBase description: transcription factor
K10D11.1 K10D11.1 P W All gene names: dod-17; K10D11.1; 4N741; CE35589; NM_070085; WBGene00010745; WP:CE35589
K10D3.4 K10D3.4 P W All gene names: K10D3.4; 1H712; CE06173; Q21418_CAEEL; WBGene00010738; WP:CE06173 WormBase description: serine proteinase inhibitor (kunitz type)
K11C4.2 K11C4.2 P W All gene names: K11C4.2; 5H375; CE12110; WBGene00019643; WP:CE12110
K11H12.5 K11H12.5 P W All gene names: K11H12.5; 4B433; CE18054; WBGene00019661; WP:CE18054
M01D1.2 M01D1.2 P W All gene names: math-34; M01D1.2; 2B323; CE32698; CE35998; WBGene00019699; WP:CE32698; WP:CE35998
M02G9.1 M02G9.1 P W All gene names: M02G9.1; 2K625; CE36944; O17970_CAEEL; WBGene00010830; WP:CE36944 WormBase description: keratin like protein
M03D4.4 M03D4.4 P W All gene names: M03D4.4; M03D4.4b.1; M03D4.4b.2; 4G888; CE29432; CE37783; WBGene00019751; WP:CE29432; WP:CE37783 WormBase description: zinc-finger protein
M05B5.2 M05B5.2 P W All gene names: MYO2-B; M05B5.2; 1H748; CE31044; WBGene00010870; WP:CE31044
M162.2 M162.2 P W All gene names: M162.2; 5U251; CE18892; WBGene00010928; WP:CE18892
M195.2 M195.2 P W All gene names: M195.2; 2I653; CE34950; WBGene00010948; WP:CE34950
M88.4 M88.4 P W All gene names: M88.4; 3F639; CE34207; WBGene00010907; WP:CE34207
R02F11.1 R02F11.1 P W All gene names: R02F11.1; 5F281; CE12496; O16364_CAEEL; WBGene00019839; WP:CE12496
R03C1.1 R03C1.1, R03C1.2 P W All gene names: R03C1.1; 2P194; CE35358; WBGene00010987; WP:CE35358
R03C1.1 R03C1.1, R03C1.2 P W All gene names: R03C1.1; 2P194; CE35358; WBGene00010987; WP:CE35358
R03D7.6 R03D7.6 P W All gene names: gst-5; R03D7.6; 2L241; CE01613; GST5_CAEEL; NM_063956; WBGene00001753; WP:CE01613 WormBase description: glutathione S-transferase
R04E5.7 R04E5.7 P W All gene names: R04E5.7; CE35748; WBGene00019870; WP:CE35748; XJ416
R06F6.9 R06F6.9 P W All gene names: acbp-2; ech-4; R06F6.9; 2L111; CE01625; NM_063929; WBGene00001153; WP:CE01625 WormBase description: enoyl CoA hydratase/isomerase
R07B1.10 R07B1.10 P W All gene names: lec-8; R07B1.10; R07B1.10.1; R07B1.10.2; CE26721; LEC8_CAEEL; NM_077248; WBGene00002271; WP:CE26721; XK469 WormBase description: galaptin domain
R07B1.9 R07B1.9 P W All gene names: R07B1.9; CE01635; WBGene00011081; WP:CE01635; XK499; YRN9_CAEEL
R07C3.5 R07C3.5 P W All gene names: R07C3.5; 2B217; CE12530; WBGene00019921; WP:CE12530
R07E3.2 R07E3.2 P W All gene names: R07E3.2; CE02296; WBGene00011103; WP:CE02296; XK955
R07H5.4 R07H5.4 P W All gene names: sdz-27; R07H5.4; 4L953; CE12556; WBGene00011124; WP:CE12556
R08F11.3 R08F11.3 P W All gene names: cyp-33C8; R08F11.3; 5E272; CE12584; NM_071650; WBGene00019967; WP:CE12584 WormBase description: cytochrome P450
R09B5.5 R09B5.5 P W All gene names: pqn-54; R09B5.5; 5B943; CE12626; NM_071022; O44606_CAEEL; WBGene00004139; WP:CE12626 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
R09E10.5 R09E10.5 P W All gene names: R09E10.5; 4L60; CE06287; WBGene00011175; WP:CE06287; YF1M_CAEEL
R09F10.2 R09F10.2 P W All gene names: abu-9; pqn-56; R09F10.2; CE07436; NM_077006; Q27383_CAEEL; WBGene00000032; WP:CE07436; XI937 WormBase description: abu-9 encodes a transmembrane protein (identical to that predicted for the pqn-57 gene) with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-9 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-9 may help protect the organism from damage by improperly folded nascent protein.
R09F10.7 R09F10.7 P W All gene names: pqn-57; R09F10.7; NM_077005; WBGene00004141; XI934 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
R102.2 R102.2 P W All gene names: R102.2; 4L453; CE23912; WBGene00011289; WP:CE23912
R107.7 R107.7 P W All gene names: gst-1; R107.7; R107.7.1; R107.7.2; 3K149; CE00302; GSTP1_CAEEL; NM_066605; WBGene00001749; WP:CE00302 WormBase description: gst-1 encodes a putative glutathione S-transferase with highest similarity to the pi class. WormBase CDS description: glutathione S-transferase
R11G1.6 R11G1.4 P W
R11G11.7 R11G11.7 P W All gene names: pqn-60; R11G11.7; 5A979; CE12752; NM_070824; O16948_CAEEL; WBGene00004144; WP:CE12752 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
T01B7.8 T01B7.8 P W All gene names: T01B7.8; 2J24; CE03592; Q22048_CAEEL; WBGene00011313; WP:CE03592
T01D1.6 T01D1.6 P W All gene names: abu-11; pqn-61; T01D1.6; 2A484; CE28071; NM_061278; P91419_CAEEL; WBGene00000034; WP:CE28071 WormBase description: abu-11 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-11 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-11 may help protect the organism from damage by improperly folded nascent protein.
T03D8.4 T03D8.4 P W All gene names: grl-14; T03D8.4; 5V297; CE18922; NM_075618; WBGene00001723; WP:CE18922 WormBase description: grl-14 encodes a hedgehog-like protein, with an N-terminal signal sequence and a C-terminal Ground-like (Grl) domain; GRL-14 is expressed in intestine, head mesodermal cell, hypodermis, seam cells, and uterine muscle, larval arcade cells and reproductive system, and the developing vulva; the Grl domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins.
T03F1.11 T03F1.11 P W All gene names: T03F1.11; 1E423; CE37040; WBGene00020192; WP:CE37040
T03F1.6 T03F1.6 P W All gene names: T03F1.6; 1E408; CE13106; CE28248; WBGene00020188; WP:CE13106; WP:CE28248
T03G11.8 T03G11.8 P W All gene names: zig-6; T03G11.8; CE39763; NM_076481; WBGene00006983; WP:CE39763; XF804 WormBase description: zig-6 encodes a predicted membrane-associated protein containing two C2-type immunoglobulin domains and a GPI (glycosylated phosphatidylinositol) anchor site, but no transmembrane domain; ZIG-6 is predicted to function in cell adhesion and/or signaling, and as loss of zig-6 activity via RNA-mediated interference results in a Clear phenotype, zig-6 appears also to be required for maintenance of body fluid homeostasis; ZIG-6 is expressed in anterior and posterior body wall muscles. WormBase CDS description: human leukocyte surface protein (weak)
T04C9.4 T04C9.4 P W All gene names: mlp-1; T04C9.4; 3H62; CE31589; CE31590; CE31591; NM_065899; NM_065900; NM_065901; WBGene00003375; WP:CE31589; WP:CE31590; WP:CE31591 WormBase description: contains LIM-like binding domain
T04C9.6 T04C9.6 P W All gene names: frm-2; T04C9.6; T04C9.6a.1; T04C9.6a.2; 3H68; CE29463; CE39274; NM_065902; WBGene00001489; WP:CE29463; WP:CE39274 WormBase description: band 4.1-like domain
T04H1.6 T04H1.6 P W All gene names: egf-5; lrx-1; T04H1.6; 5M735; CE38413; NM_073671; Q22179_CAEEL; WBGene00003075; WP:CE38413 WormBase description: lrx-1 encodes a protein that contains four class A low-density lipoprotein receptor domains. WormBase CDS description: low-density lipoprotein receptor
T05B4.11 T05B4.11 P W All gene names: phat-5; T05B4.11; 5E600; CE13213; WBGene00020242; WP:CE13213
T05B4.12 T05B4.12 P W All gene names: T05B4.12; 5E602; CE13215; WBGene00020243; WP:CE13215
T05B4.13 T05B4.13 P W All gene names: T05B4.13; 5E604; CE13217; WBGene00020244; WP:CE13217
T05B4.3 T05B4.3 P W All gene names: phat-4; T05B4.3; 5E609; CE13197; WBGene00020237; WP:CE13197
T05B4.8 T05B4.8 P W All gene names: T05B4.8; 5E584; CE13207; WBGene00020239; WP:CE13207
T05C12.4 T05C12.4 P W All gene names: T05C12.4; 2I464; CE32927; WBGene00011468; WP:CE32927
T05E11.3 T05E11.3 P W All gene names: T05E11.3; T05E11.3.1; T05E11.3.2; 4L887; CE06362; WBGene00011480; WP:CE06362 WormBase description: endoplasmin precursor (GRP94)
T06D8.3 T06D8.3 P W All gene names: T06D8.3; 2L515; CE02324; WBGene00011524; WP:CE02324
T06E4.11 T06E4.11 P W All gene names: pqn-63; T06E4.11; 5K95; CE06377; NM_073078; WBGene00004146; WP:CE06377 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
T06E4.7 T06E4.7 P W All gene names: T06E4.7; 5K107; CE37849; WBGene00011534; WP:CE37849
T06E4.8 T06E4.8 P W All gene names: T06E4.8; 5K102; CE23951; WBGene00011535; WP:CE23951
T06E4.9 T06E4.9 P W All gene names: T06E4.9; 5K101; CE23952; WBGene00011536; WP:CE23952
T08B1.2 T08B1.2 P W All gene names: tnt-4; T08B1.2; 5C468; CE30830; CE33309; NM_071143; NM_182357; WBGene00006589; WP:CE30830; WP:CE33309
T08E11.7 T08E11.7 P W All gene names: fbxa-3; T08E11.7; 2C106; CE39399; WBGene00020363; WP:CE39399 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
T10E10.4 T10E10.4 P W All gene names: T10E10.4; CE25989; WBGene00020421; WP:CE25989; XG934
T11B7.4 T11B7.4 P W All gene names: alp-1; eat-1; T11B7.4; 4J625; CE03650; CE35944; CE35945; CE35946; CE39401; NM_069132; NM_069133; Q17878_CAEEL; WBGene00001132; WP:CE03650; WP:CE35944; WP:CE35945; WP:CE35946; WP:CE39401 WormBase description: LIM domains
T11F9.12 T11F9.12 P W All gene names: T11F9.12; 5L974; CE18953; WBGene00011713; WP:CE18953
T12B5.8 T12B5.8 P W All gene names: fbxa-59; T12B5.8; 3B556; CE32934; WBGene00020455; WP:CE32934 WormBase description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
T14F9.4 T14F9.4 P W All gene names: peb-1; T14F9.4; T14F9.4a.1; T14F9.4a.2; CE07500; CE34372; Q22491_CAEEL; WBGene00003968; WP:CE07500; WP:CE34372; XC837
T14G10.4 T14G10.4 P W All gene names: T14G10.4; 4K921; CE06450; WBGene00011774; WP:CE06450 WormBase description: Transthyretin-like family
T15H9.3 T15H9.3 P W All gene names: hlh-6; T15H9.3; 2J902; CE01666; HLH6_CAEEL; NM_063669; WBGene00001952; WP:CE01666 WormBase description: achaete-scute helix-loop-helix domain
T16G1.1 T16G1.1 P W All gene names: pqn-67; T16G1.1; 5N405; CE20071; NM_073830; WBGene00004150; WP:CE20071 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
T17H7.4 T17H7.5 P W
T18D3.4 T18D3.4 P W All gene names: myo-2; T18D3.4; CE31619; MYO2_CAEEL; NM_077691; WBGene00003514; WP:CE31619; XN91 WormBase description: myo-2 encodes a muscle-type specific myosin heavy chain isoform; myo-2 is expressed in pharyngeal muscle. WormBase CDS description: myosin heavy chain C
T20B3.2 T20B3.2 P W All gene names: tni-3; T20B3.2; 5R314; CE20087; NM_074849; TNNI3_CAEEL; WBGene00006585; WP:CE20087 WormBase description: Troponin
T20G5.7 T20G5.7 P W All gene names: dod-6; T20G5.7; 3L287; CE00587; NM_066856; WBGene00011869; WP:CE00587
T22B11.4 T22B11.4 P W All gene names: T22B11.4; 4F445; CE17243; CE33701; WBGene00020678; WP:CE17243; WP:CE33701
T23D8.8 T23D8.8 P W All gene names: cfi-1; T23D8.8; 1K570; CE31068; NM_060243; WBGene00000476; WP:CE31068 WormBase description: cfi-1 encodes a DNA-binding protein containing an AT-rich interaction domain (ARID) that affects differentiation of the URA sensory neurons, AVD, and PVC interneurons; acts downstream of UNC-86 and LIN-32 in controlling URA and IL2 cell fate, and is expressed in some neurons and muscle cells. WormBase CDS description: ARID DNA-binding protein
T23F1.6 T23F1.6 P W All gene names: pqn-71; T23F1.6; 5P947; CE14080; NM_074448; O18118_CAEEL; WBGene00004153; WP:CE14080 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
T23G5.3 T23G5.3 P W All gene names: T23G5.3; 3K318; CE37793; WBGene00011963; WP:CE37793; YN03_CAEEL
T24F1.4 T24F1.4 P W All gene names: T24F1.4; 2L602; CE02364; WBGene00011996; WP:CE02364
T25E4.1 T25E4.1 P W All gene names: T25E4.1; 2F869; CE28493; WBGene00020803; WP:CE28493; YR01_CAEEL
T26C5.1 T26C5.1 P W All gene names: gst-13; T26C5.1; 2J523; CE03737; NM_063566; WBGene00001761; WP:CE03737 WormBase description: glutathione S-transferase
T27C5.10 T27C5.10 P W All gene names: T27C5.10; 5R910; CE39786; WBGene00012083; WP:CE39786
T28B4.4 T28B4.4 P W All gene names: T28B4.4; T28B4.4.1; T28B4.4.2; CE33711; WBGene00020887; WP:CE33711; XH216 WormBase description: T28B4.4 encodes a claudin homolog that may be required for normal cohesion of apical junctions in epithelia; T28B4.4 is worm-specific, weakly similar to CLC-1; T28B4.4 has no obvious function in mass RNAi assays; claudins are integral membrane proteins with four transmembrane sequences that are found in mammalian tight junctions (TJs), induce TJs when transgenically expressed in cells normally lacking them, and can mediate the specific conductance of of specific ions (e.g., magnesium or calcium) through TJs while blocking the flow of water.
T28C12.6 T28C12.6 P W All gene names: T28C12.6; 5G812; CE14349; WBGene00020893; WP:CE14349
W01C9.1 W01C9.1 P W All gene names: W01C9.1; 2I824; CE35912; WBGene00012175; WP:CE35912
W01C9.3 W01C9.3 P W All gene names: pqn-73; W01C9.3; 2I835; CE02369; NM_063403; WBGene00004155; WP:CE02369 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
W03F8.6 W03F8.6 P W All gene names: W03F8.6; 4F950; CE17276; WBGene00020995; WP:CE17276
W04B5.1 W04B5.1 P W All gene names: W04B5.1; 3D519; CE28846; WBGene00021018; WP:CE28846
W05E10.3 W05E10.3 P W All gene names: ceh-32; W05E10.3; W05E10.3.1; W05E10.3.2; 5M182; CE29364; HM32_CAEEL; NM_073557; WBGene00000453; WP:CE29364 WormBase description: ceh-32 encodes a Six/sine oculis-type homeodomain protein most closely related to the Six3/6 subfamily that contains Drosophila OPTIX and human SIX3 (OMIM:603714, which when mutated leads to holoprosencephaly 2); CEH-32 appears to be essential for development and required for proper head morphogenesis; during embryogenesis, CEH-32 is expressed in hypodermal and neuronal precursors, and at later stages, in the descendants of these cells and in gonadal sheath cells; in some hypodermal cells, ceh-32 is a direct transcriptional target of VAB-3, a PAX-6 ortholog sufficient to induce ceh-32 expression in some cell types and able to bind the ceh-32 promoter in vitro. WormBase CDS description: homeobox protein (so subfamily)
W06D12.3 W06D12.3 P W All gene names: fat-5; W06D12.3; 5S205; CE16551; NM_075081; WBGene00001397; WP:CE16551 WormBase description: fat-5 encodes a delta-9 fatty acid desaturase that is predicted to be mitochondrial; when expressed heterologously in S. cerevisiae, FAT-5 rescues the fatty acid auxotrophy of the yeast delta-9 desaturase mutant ole1. WormBase CDS description: Fatty acid desaturase
W06F12.3 W06F12.3 P W All gene names: W06F12.3; 3O825; CE16557; WBGene00012307; WP:CE16557 WormBase description: serine/threonine kinase
W10D9.1 W10D9.1 P W All gene names: W10D9.1; 2A745; CE14786; WBGene00021129; WP:CE14786
Y38H6C.14 Y38H6C.14 P W All gene names: Y38H6C.14; 5V0; CE19108; Q9XX47_CAEEL; WBGene00012626; WP:CE19108
Y51A2D.11 Y51A2D.11 P W All gene names: Y51A2D.11; 5T40; CE19207; WBGene00013079; WP:CE19207 WormBase description: Transthyretin-like family
Y73F4A.1 Y73F4A.1 P W All gene names: Y73F4A.1; 4J808; CE20367; DMON2_CAEEL; WBGene00013514; WP:CE20367
Y73F4A.2 Y73F4A.2 P W All gene names: Y73F4A.2; 4J806; CE20368; DMON1_CAEEL; WBGene00013515; WP:CE20368
Y76A2B.2 Y76A2B.2 P W All gene names: Y76A2B.2; 3O627; CE32279; WBGene00013574; WP:CE32279 WormBase description: Leucine Rich Repeat (2 copies) (2 domains)
ZC101.1 ZC101.1 P W All gene names: ZC101.1; CE16690; NM_064647; WBGene00013851; WP:CE16690 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). WormBase CDS description: low-density lipoprotein receptor
ZC116.3 ZC116.3 P W All gene names: ZC116.3; 5N107; CE06566; CUBN_CAEEL; WBGene00013855; WP:CE06566 WormBase description: ZC116.3 is orthologous to the human gene CUBILIN (CUBN; OMIM:602997), which when mutated leads to hereditary megaloblastic anaemia 1 (OMIM:261100). WormBase CDS description: bone morphogenetic protein 1 like
ZC250.1 ZC250.1 P W All gene names: cyn-17; cyp-17; ZC250.1; 5G285; CE37686; NM_072121; WBGene00000893; WP:CE37686
ZC443.2 ZC443.2 P W All gene names: ZC443.2; 5N290; CE06586; WBGene00013897; WP:CE06586
ZC8.3 ZC8.2, ZC8.3 P W All gene names: tag-226; ZC8.3; CE33744; WBGene00022499; WP:CE33744; XF621
ZC8.3 ZC8.2, ZC8.3 P W All gene names: tag-226; ZC8.3; CE33744; WBGene00022499; WP:CE33744; XF621
ZK1025.7 ZK1025.7 P W All gene names: ZK1025.7; 1M59; CE19334; WBGene00014187; WP:CE19334
ZK1067.7 ZK1067.7 P W All gene names: pqn-95; ZK1067.7; 2J516; CE03844; NM_063565; Q23390_CAEEL; WBGene00004174; WP:CE03844 WormBase description: The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
ZK287.1 ZK287.1 P W All gene names: ZK287.1; ZK287.1.1; ZK287.1.2; 5K149; CE06610; WBGene00013962; WP:CE06610
ZK418.3 ZK418.3 P W All gene names: ZK418.3; 3I161; CE38989; WBGene00022733; WP:CE38989
ZK662.2 ZK662.2 P W All gene names: ZK662.2; CE15377; WBGene00014039; WP:CE15377; XQ315
ZK673.7 ZK673.7 P W All gene names: tnc-2; ZK673.7; 2K757; CE01719; NM_063850; TNNC2_CAEEL; WBGene00006583; WP:CE01719 WormBase description: tnc-2 encodes pharyngeal muscle troponin C, the calcium-binding component of the troponin complex of actin thin filaments; TNC-2 is essential for postembryonic development, and by homology, likely functions to regulate pharyngeal muscle contraction in response to changes in intracellular calcium; TNC-2 is expressed exclusively in pharyngeal muscle. WormBase CDS description: troponin C
ZK682.5 ZK682.5 P W All gene names: ZK682.5; 5J766; CE05103; WBGene00022789; WP:CE05103
ZK816.4 ZK816.4 P W All gene names: ZK816.4; CE39081; WBGene00022827; WP:CE39081; XD968
ZK892.7 ZK892.7 P W All gene names: sdz-38; ZK892.7; 2K270; CE01729; Q09620_CAEEL; WBGene00014131; WP:CE01729 WormBase description: Zinc finger, C2H2 type