Gaudet et al 2002, ST1 Known pharyngeal genes, 18 genes

Gene list file name:Gaudet2002_ST1_known-pharyngeal-genes
Type of gene identifier:Cosmid name
Description:Gaudet et al 2002 Supplement Table1: Known pharyngeal genes detected by the microarrays.  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

C47D12.7 C47D12.7 P W All gene names: kel-1; C47D12.7; 2L985; CE20569; NM_064095; WBGene00002184; WP:CE20569 WormBase description: kel-1 encodes a BTB/POZ- and Kelch motif-containing protein orthologous to Drosophila Kelch, which is essential for actin organization in ovarian ring canals; in C. elegans, kel-1 is required for regulating feeding during larval development and more specifically, for pharyngeal isthmus peristalsis and efficient trapping of food in the pharynx; KEL-1 is first expressed at the 1.5-fold stage of embryogenesis in the pharyngeal lumen and the nerve ring; later adult and larval expression is confined to the pharyngeal gland cells in which KEL-1 may be required for maintenance of gland cell-specific structures. WormBase CDS description: ring canal protein like
F29F11.5 ceh-22 P W
W05E10.3 ceh-32 P W
H30A04.1 eat-20 P W
F12F3.1 exp-2 P W
F44A2.5 F44A2.5 P W All gene names: F44A2.5; F44A2.5a.1; F44A2.5a.2; 5J781; CE33088; CE33089; Q8MQ52_CAEEL; WBGene00018405; WP:CE33088; WP:CE33089
F53B3.3 F53B3.3 P W All gene names: F53B3.3; CE37117; Q20712_CAEEL; WBGene00018742; WP:CE37117; XD488
F53H4.5 F53H4.5 P W All gene names: F53H4.5; CE35554; WBGene00010010; WP:CE35554; XQ501 WormBase description: SAND domain
C25A11.4 jam-1 P W
W06F12.1 lit-1 P W
R06C7.10 myo-1 P W
T18D3.4 myo-2 P W
F54F3.1 nid-1 P W
T14F9.4 peb-1 P W
F38A6.1 pha-4 P W
T09A5.2 T09A5.2 P W All gene names: klp-3; T09A5.2; 2I131; CE01083; CE36407; CE36408; KLP3_CAEEL; WBGene00002216; WP:CE01083; WP:CE36407; WP:CE36408 WormBase description: klp-3 encodes a C-terminal kinesin motor protein orthologous to Drosophila NCD and Saccharomyces cerevisiae KAR3; expression of antisense klp-3 RNA under the control of a heat shock promoter suggests that KLP-3 plays a role in chromosome movement and segregation that is essential for germline and embryonic development; klp-3 mRNA is expressed at a low level in mixed-stage RNA preparations; consistent with this, a klp-3::lacZ fusion is expressed in newly hatched larvae in the specialized epithelial marginal cells in the pharynx and muscle cells in the posterior gut region.
T11B7.4 T11B7.4 P W All gene names: alp-1; eat-1; T11B7.4; 4J625; CE03650; CE35944; CE35945; CE35946; CE39401; NM_069132; NM_069133; Q17878_CAEEL; WBGene00001132; WP:CE03650; WP:CE35944; WP:CE35945; WP:CE35946; WP:CE39401 WormBase description: LIM domains
ZK673.7 tnc-2 P W