Chen et al 2006, X-box containing genes down in da, 11 genes

Gene list file name:Chen2006_T2_X-box-correlate-with-daf-19
Type of gene identifier:Cosmid name
Description:Chen et al 2006 C. elegans genes that contain X-box motifs in their promoters, are positively correlated with daf-19 in gene expression, and have reduced expression in daf-19(-) strains  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

C18H9.8 C18H9.8 P W All gene names: C18H9.8; 2G971; CE27719; WBGene00016005; WP:CE27719
C48B6.8 C48B6.8 P W All gene names: C48B6.8; 1H494; CE32166; WBGene00016744; WP:CE32166
E04A4.6 E04A4.6 P W All gene names: E04A4.6; 4F510; CE16967; WBGene00017120; WP:CE16967
F20D12.3 F20D12.3 P W All gene names: bbs-2; F20D12.3; 4I701; CE04433; NM_068924; WBGene00000242; WP:CE04433 WormBase description: bbs-2 is orthologous to human BBS2 (OMIM:606151, mutated in Bardet-Biedl syndrome 2); while the function of BBS-2 is unknown, it shares conserved domains with its human paralogs BBS1 and BBS7, which also are mutated in other Bardet-Biedl syndromes.
F32A6.2 F32A6.2 P W All gene names: F32A6.2; CE34008; WBGene00017973; WP:CE34008; XF921
F38G1.1 F38G1.1 P W All gene names: che-2; F38G1.1; F38G1.1.1; F38G1.1.2; CE25876; NM_075705; WBGene00000484; WP:CE25876; XB103 WormBase description: che-2 encodes a protein that contains G-protein beta-like WD-40 repeats that affects chemotaxis, dauer formation, and longevity; expressed in the cilia of most ciliated sensory neurons, some head neurons, and male tail rays. WormBase CDS description: G-beta-repeats
R01H10.6 R01H10.6 P W All gene names: bbs-5; R01H10.6; 3L348; CE01042; NM_066871; Q21626_CAEEL; WBGene00010974; WP:CE01042
T25F10.5 T25F10.5 P W All gene names: bbs-8; T25F10.5; 5H242; CE31071; NM_072310; WBGene00000244; WP:CE31071 WormBase description: bbs-8 encodes a tetratricopeptide repeat (TPR)-containing protein that is orthologous to the human Bardet-Biedl syndrome protein, BBS8; in C. elegans, bbs-8 activity is required for cilia biogenesis and function; accordingly, bbs-8 mutant animals display odorant chemotaxis defects and exhibit both aberrant motility and abnormal localization of at least two intraflagellar transport (IFT) protein markers; a BBS-8::GFP translational fusion is expressed exclusively in ciliated head and tail neurons, where it localizes predominantly to the base of cilia, known as the ciliary transition zone; BBS-8::GFP is also observed moving bidirectionally (anterograde and retrograde) along the ciliary axoneme; DNA sequences upstream of bbs-8 contain X box DNA binding sites, suggesting that bbs-8 expression may be regulated by the DAF-19 RFX-type transcription factor.
T28F3.6 T28F3.6 P W All gene names: T28F3.6; 4S242; CE20116; WBGene00012132; WP:CE20116
Y41G9A.1 Y41G9A.1 P W All gene names: osm-5; Y41G9A.1; CE28361; NM_076110; WBGene00003885; WP:CE28361; XD609 WormBase description: The osm-5 gene encodes a homolog of the murine cystic kidney disease gene Tg737 that is required for the production of cilia in sensory neurons.
ZK418.3 ZK418.3 P W All gene names: ZK418.3; 3I161; CE38989; WBGene00022733; WP:CE38989