HWienver et al 2005 ST3 10 day daf-2 vs. 6 day co, 140 genes

Gene list file name:HWiener2005_ST3_10day-daf-2-vs-6day-controltxt
Type of gene identifier:Cosmid name
Description:HWienver et al 2005 Supplement Table3: Comparison of gene expression between 10-day old daf-2 and 6-day old control worms  
Organism:Caenorhabditis elegans (nematode)
Gene list type:Experimental

Gene name             Source Gene ID          Annotation                                                  Date       Added by    

F13D12.4 alh-8 P W
B0280.5 B0280.5 P W All gene names: B0280.5; 3I192; B028_CAEEL; CE31868; WBGene00015102; WP:CE31868 WormBase description: B0280.5 encodes a protein with a chitin binding peritrophin-A domain that is required, in conjunction with CEJ-1, for early embryonic development; B0280.5 mRNA is expressed specifically in the adult hermaphrodite germ line, is a direct target of GLD-1, and has an RNAi phenotype consistent with the hypothesis that B0280.5 is an effector of GLD-1 in the germline.
B0334.1 B0334.1 P W All gene names: B0334.1; B0334.1.1; B0334.1.2; 2L776; CE02932; WBGene00007142; WP:CE02932 WormBase description: Transthyretin-like family
R06C7.8 bub-1 P W
C09H10.6 C09H10.6 P W All gene names: C09H10.6; 2L397; CE03007; Q17886_CAEEL; WBGene00007500; WP:CE03007 WormBase description: histone binding protein
C15C7.5 C15C7.5 P W All gene names: C15C7.5; CE03991; WBGene00015791; WP:CE03991; XD770
C33H5.13 C33H5.13 P W All gene names: C33H5.13; 4I556; CE04156; WBGene00016379; WP:CE04156
C34D1.5 C34D1.5 P W All gene names: C34D1.5; 5N749; CE18541; WBGene00007932; WP:CE18541 WormBase description: Basic region plus leucine zipper transcription factors
C38D4.3 C38D4.3 P W All gene names: C38D4.3; 3F881; CE36378; WBGene00008004; WP:CE36378 WormBase description: mel-28 was identified in a screen for genes involved in cell division in the early embryo; mel-28 mutants have no or poorly visible pronuclei and a weak mititic spindle; the molecular identity of mel-28 is unknown.
C44B7.10 C44B7.10 P W All gene names: C44B7.10; C44B7.10.1; C44B7.10.2; C44B7.10.3; C44B7.10.4; 2H180; CE32326; WBGene00016630; WP:CE32326
C54G10.3 C54G10.3 P W All gene names: pmp-3; C54G10.3; 5P133; CE05518; NM_074219; WBGene00004060; WP:CE05518 WormBase description: peroxisomal membrane protein (PMP70)
C56C10.8 C56C10.8 P W All gene names: icd-1; C56C10.8; C56C10.8.1; C56C10.8.2; 2G878; BTF3_CAEEL; CE02573; NM_062935; WBGene00002045; WP:CE02573 WormBase description: Transcription factor BTF3 (human)
T05G5.3 cdk-1 P W
C07G2.1 cej-1 P W
F33A8.3 cey-1 P W
F46F11.2 cey-2 P W
Y39A1C.3 cey-4 P W
C53B4.5 col-119 P W
T05A1.2 col-122 P W
C24F3.6 col-124 P W
F26F12.1 col-140 P W
T15B7.5 col-141 P W
T15B7.3 col-143 P W
F57B1.3 col-159 P W
F57B1.4 col-160 P W
C34F6.2 col-178 P W
C34F6.3 col-179 P W
F02D10.1 col-183 P W
F15A2.1 col-184 P W
ZK1193.1 col-19 P W
T05E7.2 col-55 P W
F11H8.3 col-8 P W
K12D12.3 col-84 P W
Y41C4A.16 col-95 P W
F56A8.6 cpf-2 P W
ZK856.1 cul-5 P W
ZC168.4 cyb-1 P W
T06E6.2 cyb-3 P W
M03A8.1 dhs-28 P W
ZK863.6 dpy-30 P W
C04A2.3 egl-27 P W
F10G7.2 F10G7.2 P W All gene names: tsn-1; F10G7.2; F10G7.2.1; F10G7.2.2; 2E999; CE02626; NM_062438; WBGene00006626; WP:CE02626 WormBase description: human 100 kDa activator protein
F12F6.5 F12F6.5 P W All gene names: tag-13; F12F6.5; 4M341; CE20680; Q19370_CAEEL; WBGene00006406; WP:CE20680 WormBase description: chimaerin like
F13H8.7 F13H8.7 P W All gene names: F13H8.7; F13H8.7.1; F13H8.7.2; F13H8.7.3; 2G578; CE02641; WBGene00017440; WP:CE02641 WormBase description: beta-ureidopropionase (rat)
F18A1.5 F18A1.5 P W All gene names: F18A1.5; F18A1.5.1; F18A1.5.2; 2H955; CE04405; RFA1_CAEEL; WBGene00017546; WP:CE04405 WormBase description: F18A1.5 encodes the C. elegans ortholog of the replication protein A (RPA) large subunit; by homology, the F18A1.5 gene product is predicted to function as a DNA binding and oligonucleotide oligosaccharide binding (OB) protein that is required for DNA replication, repair, and recombination; large-scale RNAi screens indicate that the product of F18A1.5 is essential for embryonic development, and that in yeast two-hybrid assays interacts with the product of M04F3.1, the RPA medium subunit; in situ hybridization studies indicate that F18A1.5 transcripts are expressed in germ cells. WormBase CDS description: replication factor A
F23A7.4 F23A7.4 P W All gene names: F23A7.4; CE09578; WBGene00009069; WP:CE09578; XQ825 WormBase description: glutamate receptor epsilon subunit like
F30F8.3 F30F8.3 P W All gene names: F30F8.3; 1I413; CE27147; Q93654_CAEEL; WBGene00009272; WP:CE27147 WormBase description: PDZ domain (Also known as DHR or GLGF).
F32E10.6 F32E10.6 P W All gene names: F32E10.6; F32E10.6.1; F32E10.6.2; 4I344; CE04479; WBGene00017993; WP:CE04479
F44G4.4 F44G4.4 P W All gene names: tag-169; F44G4.4; 2J289; CE02231; CE36440; Q20414_CAEEL; WBGene00006514; WP:CE02231; WP:CE36440 WormBase description: RNA binding protein
F55A3.3 F55A3.3 P W All gene names: phi-16; F55A3.3; 1L369; CE17113; SPT16_CAEEL; WBGene00018849; WP:CE17113 WormBase description: transcritpion factor
F59B2.13 F59B2.13 P W All gene names: SRQ-1; F59B2.13; 3K110; CE37246; WBGene00010315; WP:CE37246; YMJC_CAEEL WormBase description: possible G protein coupled receptor
Y67H2A.8 fat-1 P W
W02A2.1 fat-2 P W
W08D2.4 fat-3 P W
VZK822L.1 fat-6 P W
K08C7.5 fmo-12 P W
Y57G11C.10 gdi-1 P W
C05E4.9 gei-7 P W
H02I12.1 H02I12.1 P W All gene names: H02I12.1; 4M141; CE37527; O45599_CAEEL; WBGene00010351; WP:CE37527
F43E2.4 haf-2 P W
C53A5.3 hda-1 P W
C26D10.2 hel-1 P W
F55G1.3 his-62 P W
Y49E10.6 His-72 P W
Y48B6A.14 hmg-1.1 P W
Y17G7A.1 hmg-12 P W
F42A6.7 hrp-1 P W
F38E11.1 hsp-12.3 P W
F38E11.2 hsp-12.6 P W
T27E4.8 hsp-16.1 P W
T27E4.2 hsp-16.11 P W
Y46H3A.3 hsp-16.2 P W
Y46H3A.2 hsp-16.41 P W
T27E4.3 hsp-16.48 P W
T27E4.9 hsp-16.49 P W
K04F10.6 K04F10.6 P W All gene names: rde-3; K04F10.6; 1G930; CE11740; CE33137; NM_059433; NM_182080; WBGene00004325; WBGene00019398; WP:CE11740; WP:CE33137 WormBase description: mut-2 encodes a nucleotidyltransferase that is a member of the polymerase beta nucleotidyltransferase superfamily that includes poly(A) polymerases, 2-5 oligoadenylate synthetases, C. elegans GLD-2, and S. cerevisiae Trf4p; MUT-2 activity is required for meiotic chromosome segregation, negative regulation of DNA transposition, non-transgene-induced RNAi (i.e. RNAi via feeding is affected, whereas RNAi via expression of sense and antisense RNA from a transgene is not), fertility, and viability; analysis of siRNA levels in mut-2 mutant animals indicates that during RNAi, MUT-2 activity is required at a point upstream of siRNA accumulation; neither the precise mechanistic role of MUT-2 in posttranscriptional silencing, nor the MUT-2 expression pattern, is yet known.
K07A1.6 K07A1.6 P W All gene names: K07A1.6; 1K168; CE18856; WBGene00010613; WP:CE18856
K07C5.4 K07C5.4 P W All gene names: K07C5.4; 5K832; CE06114; WBGene00010627; WP:CE06114; YZVL_CAEEL WormBase description: yeast protein L8167.9-like
K12G11.3 K12G11.3 P W All gene names: dod-11; sodh-1; K12G11.3; K12G11.3.1; K12G11.3.2; K12G11.3.3; 5M369; ADH1_CAEEL; CE12212; NM_073590; WBGene00010790; WP:CE12212 WormBase description: alcohol dehydrogenase
T01G9.6 kin-10 P W
C33H5.4 klp-10 P W
DY3.2 lmn-1 P W
M28.5 M28.5 P W All gene names: phi-9; M28.5; M28.5.1; M28.5.2; 2K948; CE02283; NH2L1_CAEEL; SNU13CE; WBGene00010896; WP:CE02283 WormBase description: ribosomal protein (L7AE family)
Y17G7B.5 mcm-2 P W
C25D7.6 mcm-3 P W
Y39G10AR.14 mcm-4 P W
R10E4.4 mcm-5 P W
ZK632.1 mcm-6 P W
AH6.5 mex-6 P W
W03D2.4 pcn-1 P W
Y48G1BL.3 puf-10 P W
F54C9.8 puf-5 P W
F18A11.1 puf-6 P W
B0273.2 puf-7 P W
F53G12.1 rab-11.1 P W
C26D10.1 ran-3 P W
C27B7.8 rap-1 P W
K01G5.6 rib-2 P W
K02F3.11 rnp-5 P W
Y37E3.7 rpa-1 P W
F10B5.1 rpl-10 P W
C04F12.4 rpl-14 P W
C09D4.5 rpl-19 P W
B0250.1 rpl-2 P W
E04A4.8 rpl-20 P W
B0336.10 rpl-23 P W
B0513.3 rpl-29 P W
Y106G6H.3 rpl-30 P W
W09C5.6 rpl-31 P W
B0041.4 rpl-4 P W
Y48B6A.2 rpl-43 P W
B0393.1 rps-0 P W
F40F11.1 rps-11 P W
C16A3.9 rps-13 P W
T08B2.10 rps-17 P W
C49H3.11 rps-2 P W
F53A3.3 rps-22 P W
F56E10.4 rps-27 P W
ZC434.2 rps-7 P W
F42C5.8 rps-8 P W
C18D11.4 rsp-8 P W
T19E7.2 skn-1 P W
ZC404.8 spn-4 P W
C27B7.1 spr-2 P W
T10F2.4 T10F2.4 P W All gene names: T10F2.4; T10F2.4.1; T10F2.4.2; 3G260; CE38104; PRP19_CAEEL; WBGene00020423; WP:CE38104
T28B4.3 T28B4.3 P W All gene names: T28B4.3; CE14325; WBGene00020886; WP:CE14325; XH214
F09E10.11 tts-1 P W
Y105E8A.16 Y105E8A.16 P W All gene names: rps-20; Y105E8A.16; Y105E8A.16.1; Y105E8A.16.2; Y105E8A.16.3; Y105E8A.16.4; Y105E8B.S; 1P60; CE29835; NM_170948; WBGene00004489; WP:CE29835 WormBase description: rps-20 encodes a small ribosomal subunit S20 protein.
Y40B10A.6 Y40B10A.6 P W All gene names: Y40B10A.6; 5C522; CE21794; WBGene00021491; WP:CE21794
Y41D4B.5 Y41D4B.5 P W All gene names: rps-28; Y41D4B.5; Y41D4B.5.1; Y41D4B.5.2; 4C425; CE21842; NM_067714; RS28_CAEEL; WBGene00004497; WP:CE21842 WormBase description: rps-28 encodes a small ribosomal subunit S28 protein.
Y73B6BL.6 Y73B6BL.6 P W All gene names: sqd-1; Y73B6BL.6; Y73B6BL.6a.1; Y73B6BL.6a.2; Y73B6BL.6a.3; Y73B6BL.6a.4; Y73B6BL.6a.5; Y73B6BL.6a.6; Y73B6BL.6a.7; Y73B6BL.6b.1; Y73B6BL.6b.2; Y73B6BL.6b.3; 4H89; CE29008; CE38662; NM_068562; WBGene00022235; WP:CE29008; WP:CE38662
ZK20.3 ZK20.3 P W All gene names: ZK20.3; 2L942; CE06606; WBGene00013924; WP:CE06606 WormBase description: RAD23 protein homolog2 like
ZK484.1 ZK484.1 P W All gene names: ZK484.1; ZK484.1.1; ZK484.1.2; ZK484.1.3; ZK484.1.4; ZK484.1.5; 1G671; CE15337; OAZ_CAEEL; WBGene00022748; WP:CE15337
ZK863.4 ZK863.4 P W All gene names: ZK863.4; ZK863.4.1; ZK863.4.2; 5M662; CE23469; WBGene00014124; WP:CE23469